Pub Date : 2024-11-17DOI: 10.1016/j.soilbio.2024.109648
Meng Zhou , Yang Xiao , Yansheng Li , Jian Liu , Yueyu Sui , Xingyi Zhang , Xiaobing Liu
Erosion of the A horizon of Mollisols is expected to change the dissolved organic matter (DOM) chemodiversity in the underlying B horizon. Three simulated erosion treatments, which had an A horizon of 30, 20, and 10 cm depth, were established for 9 years under a corn-soybean rotation on Mollisols. Compared to the A horizon that was 30 cm deep, the 20 cm treatment had 24–63% more dissolved lignin-like compounds, a significant increase, in the 0–10, 10–20, and 20–30 cm layers of the B horizon. When the A horizon was 10 cm deep, 41% more lignin-like compounds accumulated in the 10–20 cm layer of the B horizon and 22% more lignin-like compounds were detected in the 20–30 cm layer of the B horizon. Relative to the A horizon of 30 cm depth, the 20 and 10 cm treatments reduced the lipid- and protein-like compounds by 69–87% in 10–20 and 20–30 cm layers of the B horizon layers. Labile compounds increased in the 0–10 cm layer of the B horizon but decreased in the 10–20 and 20–30 cm layers of the B horizon. The DOM degradation degree, expressed in terms of the degradation index and Gibbs free energy, were related to the lignin accumulation, indicating that lignin, a recalcitrant compound, was degraded. Notably, variations in DOM chemodiversity in eroded Mollisols were primarily controlled by soil physicochemical properties and not microbial traits. Therefore, eroded Mollisols have less carbon sequestration potential in the B horizon. To prevent soil deterioration in corn-soybean rotations, we recommend to incorporate a combination of organic and mineral fertiliser to a 20–30 cm soil depth in erosion-susceptible Mollisols.
预计莫利土 A 层的侵蚀会改变下层 B 层的溶解有机物 (DOM) 化学多样性。在玉米-大豆轮作的莫利土层上建立了三种模拟侵蚀处理,其 A 层深度分别为 30、20 和 10 厘米,为期 9 年。与深度为 30 厘米的 A 地层相比,深度为 20 厘米的处理在 B 地层的 0-10、10-20 和 20-30 厘米层中溶解的木质素类化合物增加了 24-63%,增幅显著。当 A 地层深度为 10 厘米时,B 地层 10-20 厘米层中积累的木质素类化合物增加了 41%,B 地层 20-30 厘米层中检测到的木质素类化合物增加了 22%。与 30 厘米深的 A 地层相比,20 厘米和 10 厘米处理使 B 地层 10-20 厘米层和 20-30 厘米层的类脂和类蛋白化合物减少了 69-87%。在 B 地层 0-10 厘米层中,易溶化合物有所增加,但在 B 地层 10-20 厘米层和 20-30 厘米层中,易溶化合物有所减少。用降解指数和吉布斯自由能表示的 DOM 降解程度与木质素积累有关,表明木质素这种难降解化合物被降解了。值得注意的是,侵蚀莫利土中 DOM 化学多样性的变化主要受土壤理化性质的控制,而不是受微生物特性的控制。因此,受侵蚀的莫利土在 B 层的固碳潜力较小。为了防止玉米-大豆轮作中的土壤退化,我们建议在易受侵蚀的莫利土壤中将有机肥和矿物肥结合施入 20-30 厘米深的土壤中。
{"title":"Simulated erosion of A horizon influences the dissolved organic matter chemodiversity and carbon sequestration of B horizon in Mollisols","authors":"Meng Zhou , Yang Xiao , Yansheng Li , Jian Liu , Yueyu Sui , Xingyi Zhang , Xiaobing Liu","doi":"10.1016/j.soilbio.2024.109648","DOIUrl":"10.1016/j.soilbio.2024.109648","url":null,"abstract":"<div><div>Erosion of the A horizon of Mollisols is expected to change the dissolved organic matter (DOM) chemodiversity in the underlying B horizon. Three simulated erosion treatments, which had an A horizon of 30, 20, and 10 cm depth, were established for 9 years under a corn-soybean rotation on Mollisols. Compared to the A horizon that was 30 cm deep, the 20 cm treatment had 24–63% more dissolved lignin-like compounds, a significant increase, in the 0–10, 10–20, and 20–30 cm layers of the B horizon. When the A horizon was 10 cm deep, 41% more lignin-like compounds accumulated in the 10–20 cm layer of the B horizon and 22% more lignin-like compounds were detected in the 20–30 cm layer of the B horizon. Relative to the A horizon of 30 cm depth, the 20 and 10 cm treatments reduced the lipid- and protein-like compounds by 69–87% in 10–20 and 20–30 cm layers of the B horizon layers. Labile compounds increased in the 0–10 cm layer of the B horizon but decreased in the 10–20 and 20–30 cm layers of the B horizon. The DOM degradation degree, expressed in terms of the degradation index and Gibbs free energy, were related to the lignin accumulation, indicating that lignin, a recalcitrant compound, was degraded. Notably, variations in DOM chemodiversity in eroded Mollisols were primarily controlled by soil physicochemical properties and not microbial traits. Therefore, eroded Mollisols have less carbon sequestration potential in the B horizon. To prevent soil deterioration in corn-soybean rotations, we recommend to incorporate a combination of organic and mineral fertiliser to a 20–30 cm soil depth in erosion-susceptible Mollisols.</div></div>","PeriodicalId":21888,"journal":{"name":"Soil Biology & Biochemistry","volume":"201 ","pages":"Article 109648"},"PeriodicalIF":9.8,"publicationDate":"2024-11-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142665534","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-12DOI: 10.1016/j.soilbio.2024.109646
Linlin Zhong , Zhipeng Li , Lingling Shi , Thomas Larsen , Stefan Scheu , Melanie M. Pollierer
Root-derived carbon (C) is a crucial resource fuelling soil food webs. However, the quantity of these resources varies with plant communities and may also influence the flux of mineral nitrogen (N) into belowground food webs. Yet, little is known about how different plant communities, especially in agricultural systems, influence the incorporation of plant C and mineral N into the soil macrofauna. Here, we combined pulse 13C-labelling of plants with 15N-labelling of soil in a crop monoculture (oilseed rape), a mixed grass community (grass and legume mixture) and a young tree plantation (willow) to trace the fluxes of root-derived C and mineral N into earthworms and centipedes as major soil decomposers and predators, respectively, over 28 days. Bulk stable isotope analysis and compound-specific stable isotope analysis of amino acids were used to quantify the uptake of 13C and 15N by soil macrofauna and to investigate the pathways by which these resources are channelled into soil macrofauna. Aligning with their use of plant-derived resources, epigeic and anecic earthworms incorporated more root-derived C than endogeic earthworms, with endogeic earthworms mainly relying on bacteria or bacterial necromass associated with soil organic matter. Generally, macrofauna incorporated both root-derived C and mineral N across cropping systems, but incorporation was more pronounced in rape and grass than in willow. Importantly, root-derived resources facilitated the incorporation of mineral N into soil animal food webs. Centipedes, as one of the most important predators in soil, mainly incorporated root-derived C and mineral N via preying on collembolans, whereas in willow epigeic earthworms likely also contributed to their diet. Overall, the fluxes of root-derived C and mineral N into the soil food web depended on plant communities and soil animal ecological groups, with higher fluxes in herbaceous crops than in tree plantations.
根源碳(C)是为土壤食物网提供燃料的重要资源。然而,这些资源的数量随植物群落的不同而变化,也可能影响矿质氮(N)进入地下食物网的通量。然而,人们对不同植物群落(尤其是农业系统中的植物群落)如何影响土壤大型动物对植物碳和矿质氮的吸收知之甚少。在这里,我们将植物的脉冲 13C 标记与土壤的 15N 标记相结合,在作物单一栽培(油菜)、混合禾本科群落(禾本科与豆科植物的混合物)和幼树种植园(柳树)中追踪 28 天内根源 C 和矿质 N 分别进入作为主要土壤分解者和捕食者的蚯蚓和蜈蚣的通量。大量稳定同位素分析和氨基酸的特定化合物稳定同位素分析被用来量化土壤大型动物对 13C 和 15N 的吸收,并研究这些资源进入土壤大型动物体内的途径。表皮蚯蚓和无尾蚯蚓比内生蚯蚓吸收更多的根源性 C,这与它们使用植物资源的情况一致,内生蚯蚓主要依靠与土壤有机质相关的细菌或细菌新陈代谢产物。一般来说,大型动物在不同的种植系统中都能吸收根源碳和矿质氮,但在油菜和禾本科植物中的吸收比在柳树中更明显。重要的是,根源资源促进了土壤动物食物网中矿质氮的吸收。作为土壤中最重要的捕食者之一,蜈蚣主要通过捕食禾本科植物来吸收根源碳和矿质氮,而柳树中的表皮蚯蚓很可能也是它们的食物来源。总体而言,根源碳和矿质氮进入土壤食物网的通量取决于植物群落和土壤动物生态群,草本作物的通量高于树木种植园。
{"title":"Cropping systems and ecological groups of soil animals jointly affect the transfer of root-derived carbon and mineral nitrogen into the soil food web","authors":"Linlin Zhong , Zhipeng Li , Lingling Shi , Thomas Larsen , Stefan Scheu , Melanie M. Pollierer","doi":"10.1016/j.soilbio.2024.109646","DOIUrl":"10.1016/j.soilbio.2024.109646","url":null,"abstract":"<div><div>Root-derived carbon (C) is a crucial resource fuelling soil food webs. However, the quantity of these resources varies with plant communities and may also influence the flux of mineral nitrogen (N) into belowground food webs. Yet, little is known about how different plant communities, especially in agricultural systems, influence the incorporation of plant C and mineral N into the soil macrofauna. Here, we combined pulse <sup>13</sup>C-labelling of plants with <sup>15</sup>N-labelling of soil in a crop monoculture (oilseed rape), a mixed grass community (grass and legume mixture) and a young tree plantation (willow) to trace the fluxes of root-derived C and mineral N into earthworms and centipedes as major soil decomposers and predators, respectively, over 28 days. Bulk stable isotope analysis and compound-specific stable isotope analysis of amino acids were used to quantify the uptake of <sup>13</sup>C and <sup>15</sup>N by soil macrofauna and to investigate the pathways by which these resources are channelled into soil macrofauna. Aligning with their use of plant-derived resources, epigeic and anecic earthworms incorporated more root-derived C than endogeic earthworms, with endogeic earthworms mainly relying on bacteria or bacterial necromass associated with soil organic matter. Generally, macrofauna incorporated both root-derived C and mineral N across cropping systems, but incorporation was more pronounced in rape and grass than in willow. Importantly, root-derived resources facilitated the incorporation of mineral N into soil animal food webs. Centipedes, as one of the most important predators in soil, mainly incorporated root-derived C and mineral N via preying on collembolans, whereas in willow epigeic earthworms likely also contributed to their diet. Overall, the fluxes of root-derived C and mineral N into the soil food web depended on plant communities and soil animal ecological groups, with higher fluxes in herbaceous crops than in tree plantations.</div></div>","PeriodicalId":21888,"journal":{"name":"Soil Biology & Biochemistry","volume":"200 ","pages":"Article 109646"},"PeriodicalIF":9.8,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142599667","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-05DOI: 10.1016/j.soilbio.2024.109645
Karl Ritz (co-Editor-in-Chief), Joshua Schimel (co-Editor-in-Chief), Joann Whalen (co-Editor-in-Chief)
{"title":"How to produce an effective manuscript: Further perspectives from the Editors-in-Chief of Soil Biology and Biochemistry","authors":"Karl Ritz (co-Editor-in-Chief), Joshua Schimel (co-Editor-in-Chief), Joann Whalen (co-Editor-in-Chief)","doi":"10.1016/j.soilbio.2024.109645","DOIUrl":"10.1016/j.soilbio.2024.109645","url":null,"abstract":"","PeriodicalId":21888,"journal":{"name":"Soil Biology & Biochemistry","volume":"200 ","pages":"Article 109645"},"PeriodicalIF":9.8,"publicationDate":"2024-11-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142579850","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-02DOI: 10.1016/j.soilbio.2024.109644
Natalie J. Oram , Fiona Brennan , Nadine Praeg , Richard D. Bardgett , Paul Illmer , Johannes Ingrisch , Michael Bahn
Terrestrial ecosystems are increasingly threatened by extreme drought events. Soil microbial communities are central to terrestrial ecosystem function via their role in regulating biogeochemical cycling. Consequently, the impact of increasingly intense drought events on soil microbial communities will have knock-on effects for how ecosystems cope with climate change. In an outdoor grassland mesocosm experiment, we determined how increasing drought intensity affects bacterial and fungal community composition, and functioning, during and after drought. We also tested whether plant community resource acquisition strategy (fast-versus slow-strategy plant communities), plant community composition, and plant functional traits mediate soil microbial responses to increasing drought intensity. We found that increasing drought intensity markedly shifted bacterial and fungal community composition, and these effects persisted until the end of the experiment (two months after re-wetting). Bacterial and fungal communities that experienced severe droughts did not return to baseline composition, while those that experienced a mild drought did. Microbial community functioning (potential extracellular enzyme activity) was reduced at peak drought and shortly after re-wetting. While drought intensity effects on bacterial or fungal communities were insensitive to plant community resource acquisition strategy, functional group abundance (aboveground biomass of grass or forb plant species) composition (grass:forb ratio) and leaf traits (leaf dry matter content and leaf nitrogen concentration) explained significant variation in bacterial and fungal community composition during and after drought. Notably, plant community leaf dry matter content and soil nitrogen were the key factors mediating the effect of increasing drought intensity on microbial indicator taxa (ASVs). We conclude that increasing drought intensity affects grassland soil microbial communities during and after drought, and this impact is influenced by plant community composition and functional traits.
{"title":"Plant community composition and traits modulate the impacts of drought intensity on soil microbial community composition and function","authors":"Natalie J. Oram , Fiona Brennan , Nadine Praeg , Richard D. Bardgett , Paul Illmer , Johannes Ingrisch , Michael Bahn","doi":"10.1016/j.soilbio.2024.109644","DOIUrl":"10.1016/j.soilbio.2024.109644","url":null,"abstract":"<div><div>Terrestrial ecosystems are increasingly threatened by extreme drought events. Soil microbial communities are central to terrestrial ecosystem function via their role in regulating biogeochemical cycling. Consequently, the impact of increasingly intense drought events on soil microbial communities will have knock-on effects for how ecosystems cope with climate change. In an outdoor grassland mesocosm experiment, we determined how increasing drought intensity affects bacterial and fungal community composition, and functioning, during and after drought. We also tested whether plant community resource acquisition strategy (fast-versus slow-strategy plant communities), plant community composition, and plant functional traits mediate soil microbial responses to increasing drought intensity. We found that increasing drought intensity markedly shifted bacterial and fungal community composition, and these effects persisted until the end of the experiment (two months after re-wetting). Bacterial and fungal communities that experienced severe droughts did not return to baseline composition, while those that experienced a mild drought did. Microbial community functioning (potential extracellular enzyme activity) was reduced at peak drought and shortly after re-wetting. While drought intensity effects on bacterial or fungal communities were insensitive to plant community resource acquisition strategy, functional group abundance (aboveground biomass of grass or forb plant species) composition (grass:forb ratio) and leaf traits (leaf dry matter content and leaf nitrogen concentration) explained significant variation in bacterial and fungal community composition during and after drought. Notably, plant community leaf dry matter content and soil nitrogen were the key factors mediating the effect of increasing drought intensity on microbial indicator taxa (ASVs). We conclude that increasing drought intensity affects grassland soil microbial communities during and after drought, and this impact is influenced by plant community composition and functional traits.</div></div>","PeriodicalId":21888,"journal":{"name":"Soil Biology & Biochemistry","volume":"200 ","pages":"Article 109644"},"PeriodicalIF":9.8,"publicationDate":"2024-11-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142566133","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-11-02DOI: 10.1016/j.soilbio.2024.109643
Konstantinos Georgopoulos , T Martijn Bezemer , Jesper Riis Christiansen , Klaus Steenberg Larsen , Gina Moerman , Roos Vermeulen , Sten Anslan , Leho Tedersoo , Sofia IF. Gomes
Soil communities are essential to ecosystem functioning, yet the impact of reducing soil biota on root-associated communities, tree performance, and greenhouse gas (GHG) fluxes remains unclear. This study examines how different size fractions of soil biota from young and mature forests influence Alnus glutinosa performance, root-associated community composition, and GHG fluxes. We conducted a mesocosm experiment using soil community fractions (wet sieving through 250, 20, 11, and 3 μm) from young and mature forest developmental stages as inocula. The results indicate that the root-associated community composition was shaped by forest developmental stage but not by the size of the community fractions. Inoculation with the largest size fraction from mature forests negatively affected tree growth, likely due to increased competition between the plants and soil biota. In addition, GHG fluxes were not significantly impacted by either size fraction or forest developmental stage despite the different community composition supplied. Overall, our research indicates that A. glutinosa strongly selects the composition of the root-associated community, despite differences in the initial inoculum, and this composition varies depending on the stage of ecosystem development, impacting the performance of the trees but not GHG fluxes.
{"title":"Reduction of forest soil biota impacts tree performance but not greenhouse gas fluxes","authors":"Konstantinos Georgopoulos , T Martijn Bezemer , Jesper Riis Christiansen , Klaus Steenberg Larsen , Gina Moerman , Roos Vermeulen , Sten Anslan , Leho Tedersoo , Sofia IF. Gomes","doi":"10.1016/j.soilbio.2024.109643","DOIUrl":"10.1016/j.soilbio.2024.109643","url":null,"abstract":"<div><div>Soil communities are essential to ecosystem functioning, yet the impact of reducing soil biota on root-associated communities, tree performance, and greenhouse gas (GHG) fluxes remains unclear. This study examines how different size fractions of soil biota from young and mature forests influence <em>Alnus glutinosa</em> performance, root-associated community composition, and GHG fluxes. We conducted a mesocosm experiment using soil community fractions (wet sieving through 250, 20, 11, and 3 μm) from young and mature forest developmental stages as inocula. The results indicate that the root-associated community composition was shaped by forest developmental stage but not by the size of the community fractions. Inoculation with the largest size fraction from mature forests negatively affected tree growth, likely due to increased competition between the plants and soil biota. In addition, GHG fluxes were not significantly impacted by either size fraction or forest developmental stage despite the different community composition supplied. Overall, our research indicates that <em>A. glutinosa</em> strongly selects the composition of the root-associated community, despite differences in the initial inoculum, and this composition varies depending on the stage of ecosystem development, impacting the performance of the trees but not GHG fluxes.</div></div>","PeriodicalId":21888,"journal":{"name":"Soil Biology & Biochemistry","volume":"200 ","pages":"Article 109643"},"PeriodicalIF":9.8,"publicationDate":"2024-11-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142566134","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-10-29DOI: 10.1016/j.soilbio.2024.109642
Yuanhong Deng , Xiaoyan Li , Zhigang Wang , Fangzhong Shi , Shaojie Zhao , Guangrong Hu
Effects of freeze-thaw cycles on nutrient cycling and microbial activity have been well documented in laboratory simulations; however, field evidence remains insufficient, and studies regarding their effects on soil quality index (SQI)—as evaluated by soil functions that are influenced by multiple soil properties—are scarce. Therefore, we conducted spatiotemporal paired soil profile surveys along a freeze-thaw intensity gradient covering six grassland types. Results are as follows: 1) After a seasonal freeze-thaw event, soil properties across the 0–80 cm profile changed by 0.96%–31.02% (physical), −34.29%–44.04% (chemical), and −70.46%–272.97% (biological), with change rates varying across soil layers. 2) A function-based framework was employed to assess SQI0–30 under freeze-thaw conditions, and the reliability of the function indices and SQI0–30 was validated. 3) Compared to pre-freezing levels, post-thawing water retention and regulation index changed negligibly (+5.31%), carbon sequestration index remained stable (+2.52%), and the primary productivity index declined noticeably (−9.43%). Conversely, the nutrient supply and cycling index increased notably (+23.89%) due to elevated total potassium, catalase activity, and urease activity. The biodiversity provision index improved substantially (+95.63%) owing to increased dissolved organic carbon. Collectively, the SQI0–30 increased evidently by 11.78%. 4) These alterations were associated with different freeze-thaw indicators, and the daily freeze-thaw temperature difference at 0–10 cm during the “freezing→frozen→thawing” period explained 55% of the SQI0–30 change, surpassing impacts of meteorological factors (precipitation, air temperature, and snow depth). Our study suggests that natural seasonal freeze-thaw events can raise alpine grassland soil quality, with varied functional responses. The identified soil indicators and functions sensitive to freeze-thaw cycles facilitate the research on seasonal dynamics of alpine grassland soil and its multi-objective management, and the quantitative relationships with freeze-thaw indicators provide new insights for regional soil mapping in frozen areas under climate change.
{"title":"Natural seasonal freeze-thaw processes influenced soil quality in alpine grasslands: Insights from soil functions","authors":"Yuanhong Deng , Xiaoyan Li , Zhigang Wang , Fangzhong Shi , Shaojie Zhao , Guangrong Hu","doi":"10.1016/j.soilbio.2024.109642","DOIUrl":"10.1016/j.soilbio.2024.109642","url":null,"abstract":"<div><div>Effects of freeze-thaw cycles on nutrient cycling and microbial activity have been well documented in laboratory simulations; however, field evidence remains insufficient, and studies regarding their effects on soil quality index (SQI)—as evaluated by soil functions that are influenced by multiple soil properties—are scarce. Therefore, we conducted spatiotemporal paired soil profile surveys along a freeze-thaw intensity gradient covering six grassland types. Results are as follows: 1) After a seasonal freeze-thaw event, soil properties across the 0–80 cm profile changed by 0.96%–31.02% (physical), −34.29%–44.04% (chemical), and −70.46%–272.97% (biological), with change rates varying across soil layers. 2) A function-based framework was employed to assess SQI<sub>0–30</sub> under freeze-thaw conditions, and the reliability of the function indices and SQI<sub>0–30</sub> was validated. 3) Compared to pre-freezing levels, post-thawing water retention and regulation index changed negligibly (+5.31%), carbon sequestration index remained stable (+2.52%), and the primary productivity index declined noticeably (−9.43%). Conversely, the nutrient supply and cycling index increased notably (+23.89%) due to elevated total potassium, catalase activity, and urease activity. The biodiversity provision index improved substantially (+95.63%) owing to increased dissolved organic carbon. Collectively, the SQI<sub>0–30</sub> increased evidently by 11.78%. 4) These alterations were associated with different freeze-thaw indicators, and the daily freeze-thaw temperature difference at 0–10 cm during the “freezing→frozen→thawing” period explained 55% of the SQI<sub>0–30</sub> change, surpassing impacts of meteorological factors (precipitation, air temperature, and snow depth). Our study suggests that natural seasonal freeze-thaw events can raise alpine grassland soil quality, with varied functional responses. The identified soil indicators and functions sensitive to freeze-thaw cycles facilitate the research on seasonal dynamics of alpine grassland soil and its multi-objective management, and the quantitative relationships with freeze-thaw indicators provide new insights for regional soil mapping in frozen areas under climate change.</div></div>","PeriodicalId":21888,"journal":{"name":"Soil Biology & Biochemistry","volume":"200 ","pages":"Article 109642"},"PeriodicalIF":9.8,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142541585","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-10-28DOI: 10.1016/j.soilbio.2024.109641
Min Li , Jipeng Wang , Na Li , Qitong Wang , Peipei Zhang , Qiuhong Feng , Huajun Yin
Root activity creates a unique microbial hotspot in the rhizosphere, profoundly regulating free-living nitrogen fixation (FLNF). However, empirical assessments of rhizosphere FLNF and its ecological consequences for nitrogen (N) budgets remain lacking, particularly for different root functional modules. Here, we separately collected rhizosphere soils attached to two root functional modules, absorptive roots and transport roots, and investigated the rates (15N2 incorporation) and regulators of rhizosphere FLNF in a N-limited subalpine coniferous forest. The measured rates were further extrapolated to annual fluxes based on the volume of the rhizosphere and the relationship between FLNF rate and temperature. We found that absorptive roots drove significantly higher rhizosphere FLNF rates than did transport roots (12.2 vs. 7.5 ng N g−1 d−1), with both rhizosphere compartments exhibiting rates well exceeding those in the bulk soil (0.9 ng N g−1 d−1). The FLNF rates were positively correlated with soil organic carbon content but showed no significant relationship with the abundance or composition of the diazotrophic community. Moreover, when extrapolated to the ecosystem level the FLNF fluxes were 2-fold greater in the rhizosphere of absorptive roots than in that of transport roots (0.13 vs. 0.04 kg N ha−1 yr−1). Taken together, despite representing only 6.0% of the soil volume, the two rhizosphere compartments contributed as much as 47.2% to the total soil FLNF fluxes. Overall, we provide empirical evidence that despite its limited volume, the rhizosphere contributes disproportionately to the FLNF in subalpine forest soils. Our findings also underscore the critical role of root functional differentiation in regulating rhizosphere FLNF, which is essential for integrating this process into the ecosystem-level N cycle.
根系活动在根圈中形成了一个独特的微生物热点,对自由生活固氮(FLNF)产生了深远的影响。然而,对根圈自由固氮作用及其对氮(N)预算的生态影响的实证评估仍然缺乏,尤其是对不同根系功能模块的评估。在这里,我们分别采集了附着在两种根功能模块(吸收根和运输根)上的根瘤土壤,并研究了氮限制亚高山针叶林中根瘤FLNF的速率(15N2吸收)和调节因子。根据根圈体积以及FLNF速率与温度之间的关系,将测得的速率进一步推断为年通量。我们发现,吸收根驱动的根圈 FLNF 速率(12.2 纳克 N g-1 d-1 与 7.5 纳克 N g-1 d-1)明显高于运输根,两个根圈分区的速率都远远超过了块状土壤中的速率(0.9 纳克 N g-1 d-1)。FLNF速率与土壤有机碳含量呈正相关,但与重氮营养群落的丰度或组成无明显关系。此外,当推断到生态系统水平时,吸收根根圈中的 FLNF 通量是运输根根圈中的 2 倍(0.13 vs. 0.04 kg N ha-1 yr-1)。总之,尽管这两个根圈只占土壤体积的 6.0%,但对土壤 FLNF 通量的贡献却高达 47.2%。总之,我们提供的经验证据表明,尽管根圈的体积有限,但它对亚高山森林土壤中的 FLNF 的贡献却不成比例。我们的研究结果还强调了根系功能分化在调节根圈 FLNF 中的关键作用,这对于将这一过程纳入生态系统级氮循环至关重要。
{"title":"The rhizosphere contributes disproportionately to free-living nitrogen fixation in subalpine forest soils","authors":"Min Li , Jipeng Wang , Na Li , Qitong Wang , Peipei Zhang , Qiuhong Feng , Huajun Yin","doi":"10.1016/j.soilbio.2024.109641","DOIUrl":"10.1016/j.soilbio.2024.109641","url":null,"abstract":"<div><div>Root activity creates a unique microbial hotspot in the rhizosphere, profoundly regulating free-living nitrogen fixation (FLNF). However, empirical assessments of rhizosphere FLNF and its ecological consequences for nitrogen (N) budgets remain lacking, particularly for different root functional modules. Here, we separately collected rhizosphere soils attached to two root functional modules, absorptive roots and transport roots, and investigated the rates (<sup>15</sup>N<sub>2</sub> incorporation) and regulators of rhizosphere FLNF in a N-limited subalpine coniferous forest. The measured rates were further extrapolated to annual fluxes based on the volume of the rhizosphere and the relationship between FLNF rate and temperature. We found that absorptive roots drove significantly higher rhizosphere FLNF rates than did transport roots (12.2 <em>vs.</em> 7.5 ng N g<sup>−1</sup> d<sup>−1</sup>), with both rhizosphere compartments exhibiting rates well exceeding those in the bulk soil (0.9 ng N g<sup>−1</sup> d<sup>−1</sup>). The FLNF rates were positively correlated with soil organic carbon content but showed no significant relationship with the abundance or composition of the diazotrophic community. Moreover, when extrapolated to the ecosystem level the FLNF fluxes were 2-fold greater in the rhizosphere of absorptive roots than in that of transport roots (0.13 <em>vs.</em> 0.04 kg N ha<sup>−1</sup> yr<sup>−1</sup>). Taken together, despite representing only 6.0% of the soil volume, the two rhizosphere compartments contributed as much as 47.2% to the total soil FLNF fluxes. Overall, we provide empirical evidence that despite its limited volume, the rhizosphere contributes disproportionately to the FLNF in subalpine forest soils. Our findings also underscore the critical role of root functional differentiation in regulating rhizosphere FLNF, which is essential for integrating this process into the ecosystem-level N cycle.</div></div>","PeriodicalId":21888,"journal":{"name":"Soil Biology & Biochemistry","volume":"200 ","pages":"Article 109641"},"PeriodicalIF":9.8,"publicationDate":"2024-10-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142519920","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-10-22DOI: 10.1016/j.soilbio.2024.109640
Emel Kangi , Joanna R. Ridgeway , Hannah D. DeHetre , Edward R. Brzostek
Nitrogen (N) deposition has increased soil carbon (C) storage across eastern US temperate forests by reducing microbial decomposition. However, the fate of these N-induced soil C gains are uncertain given strong declines in N-deposition rates and rising soil temperatures. As N deposition has reduced soil pH and plant C investments into the rhizosphere, we compared the extent to which removing limitations to microbial decomposition by increasing soil pH, adding artificial root exudates, or elevating soil temperature would increase microbial decomposition in soils that have and have not received excess N inputs. We hypothesized that alleviating these microbial decomposition limitations would prime soil C losses from soils that have received excess N inputs. To test this hypothesis, we conducted a soil microcosm experiment where we compared microbial respiration, microbial biomass, and soil enzyme activity in soils from an unfertilized watershed and a previously N-fertilized watershed 4 years after the end of a 30-year N deposition experiment at the Fernow Experimental Forest in West Virginia. In both watersheds, we found that removing pH, plant carbon, or temperature limitations to decomposition stimulated microbial respiration. However, microbial decomposition and soil C losses were consistently lower in the previously N-fertilized watershed across all treatments. This response, coupled with a lack of differences in microbial biomass between watersheds and treatments, suggests that long-term N fertilization has fundamentally altered soil microbial communities and has led to a sustained impairment of the ability of the microbial community to decompose soil organic matter. Collectively, our results indicate that the legacy effect of N deposition on microbial communities may influence the persistence of soil C stocks in the face of global change.
{"title":"Nitrogen induced soil carbon gains are resistant to loss after the cessation of excess nitrogen inputs","authors":"Emel Kangi , Joanna R. Ridgeway , Hannah D. DeHetre , Edward R. Brzostek","doi":"10.1016/j.soilbio.2024.109640","DOIUrl":"10.1016/j.soilbio.2024.109640","url":null,"abstract":"<div><div>Nitrogen (N) deposition has increased soil carbon (C) storage across eastern US temperate forests by reducing microbial decomposition. However, the fate of these N-induced soil C gains are uncertain given strong declines in N-deposition rates and rising soil temperatures. As N deposition has reduced soil pH and plant C investments into the rhizosphere, we compared the extent to which removing limitations to microbial decomposition by increasing soil pH, adding artificial root exudates, or elevating soil temperature would increase microbial decomposition in soils that have and have not received excess N inputs. We hypothesized that alleviating these microbial decomposition limitations would prime soil C losses from soils that have received excess N inputs. To test this hypothesis, we conducted a soil microcosm experiment where we compared microbial respiration, microbial biomass, and soil enzyme activity in soils from an unfertilized watershed and a previously N-fertilized watershed 4 years after the end of a 30-year N deposition experiment at the Fernow Experimental Forest in West Virginia. In both watersheds, we found that removing pH, plant carbon, or temperature limitations to decomposition stimulated microbial respiration. However, microbial decomposition and soil C losses were consistently lower in the previously N-fertilized watershed across all treatments. This response, coupled with a lack of differences in microbial biomass between watersheds and treatments, suggests that long-term N fertilization has fundamentally altered soil microbial communities and has led to a sustained impairment of the ability of the microbial community to decompose soil organic matter. Collectively, our results indicate that the legacy effect of N deposition on microbial communities may influence the persistence of soil C stocks in the face of global change.</div></div>","PeriodicalId":21888,"journal":{"name":"Soil Biology & Biochemistry","volume":"200 ","pages":"Article 109640"},"PeriodicalIF":9.8,"publicationDate":"2024-10-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142452601","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-10-20DOI: 10.1016/j.soilbio.2024.109639
Danmei Mo , Yunlong Liu , Min Li , Huixin Li , Jun Zhang , Haoyu Qian , Yanfeng Ding , Yu Jiang
Warming often stimulates methane (CH4) emissions from rice paddies, one of the largest anthropogenic sources of CH4 emissions. However, the responses of methanogenic and methanotrophic communities to warming, particularly within active communities, remain unclear. Therefore, based on a field warming experiment in a rice-wheat system, we investigated the effects of warming on methanogenic and methanotrophic communities, using the DNA stable-isotope probing technology. Our results indicated that warming increased CH4 emissions by 27–49% over two rice growing seasons compared to ambient conditions. Warming significantly increased the abundance of methanogens by 53%, whereas did not affect activities of methanogens and active methanogenic community. Conversely, warming did not influence the abundance of methanotrophs, but reduced activities of methanotrophs by 44%. Notably, warming led to a significant rise in the relative abundance of the active type II methanotrophic community, which exhibits lower CH4 oxidation efficiency. These findings suggest that the observed increase in CH4 emissions under warming conditions is primarily driven by the enhanced abundance of methanogens and the increased presence of less efficient active type II methanotrophs. This study underscores the critical role of active microbial communities in understanding and managing CH4 emissions from rice paddies in a warming world.
气候变暖通常会刺激稻田的甲烷(CH4)排放,而稻田是最大的人为甲烷排放源之一。然而,甲烷发生群落和甲烷营养群落对气候变暖的反应,尤其是在活跃群落中的反应,仍不清楚。因此,我们在水稻-小麦系统田间增温实验的基础上,利用DNA稳定同位素探测技术研究了增温对甲烷发生群落和甲烷营养群落的影响。结果表明,与环境条件相比,在两个水稻生长季中,气候变暖使甲烷排放量增加了 27-49%。气候变暖使甲烷菌的丰度明显增加了 58%,但并不影响甲烷菌的活性和活跃的甲烷菌群落。相反,气候变暖并不影响甲烷营养体的数量,但却使甲烷营养体的活动减少了 44%。值得注意的是,气候变暖导致活跃的 II 型甲烷营养群落的相对丰度显著上升,而 II 型甲烷营养群落的 CH4 氧化效率较低。这些发现表明,在气候变暖条件下观察到的CH4排放量增加主要是由甲烷菌的丰度增加和效率较低的活性II型甲烷营养体的增加所驱动的。这项研究强调了在气候变暖的世界中,活性微生物群落在了解和管理稻田甲烷排放中的关键作用。
{"title":"Warming increases CH4 emissions from rice paddies through shifts in methanogenic and methanotrophic communities","authors":"Danmei Mo , Yunlong Liu , Min Li , Huixin Li , Jun Zhang , Haoyu Qian , Yanfeng Ding , Yu Jiang","doi":"10.1016/j.soilbio.2024.109639","DOIUrl":"10.1016/j.soilbio.2024.109639","url":null,"abstract":"<div><div>Warming often stimulates methane (CH<sub>4</sub>) emissions from rice paddies, one of the largest anthropogenic sources of CH<sub>4</sub> emissions. However, the responses of methanogenic and methanotrophic communities to warming, particularly within active communities, remain unclear. Therefore, based on a field warming experiment in a rice-wheat system, we investigated the effects of warming on methanogenic and methanotrophic communities, using the DNA stable-isotope probing technology. Our results indicated that warming increased CH<sub>4</sub> emissions by 27–49% over two rice growing seasons compared to ambient conditions. Warming significantly increased the abundance of methanogens by 53%, whereas did not affect activities of methanogens and active methanogenic community. Conversely, warming did not influence the abundance of methanotrophs, but reduced activities of methanotrophs by 44%. Notably, warming led to a significant rise in the relative abundance of the active type II methanotrophic community, which exhibits lower CH<sub>4</sub> oxidation efficiency. These findings suggest that the observed increase in CH<sub>4</sub> emissions under warming conditions is primarily driven by the enhanced abundance of methanogens and the increased presence of less efficient active type II methanotrophs. This study underscores the critical role of active microbial communities in understanding and managing CH<sub>4</sub> emissions from rice paddies in a warming world.</div></div>","PeriodicalId":21888,"journal":{"name":"Soil Biology & Biochemistry","volume":"200 ","pages":"Article 109639"},"PeriodicalIF":9.8,"publicationDate":"2024-10-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142451649","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-10-20DOI: 10.1016/j.soilbio.2024.109638
Xing Wang , Fang Chen , Jia Zeng , Zhengchen Wang , Yongzhong Feng , Xiaojiao Wang , Chengjie Ren , Gaihe Yang , Zekun Zhong , Xinhui Han
Global warming and increased drought are predicted to alter soil aggregation, biota composition, and carbon (C) balance. Microbial-derived C, such as microbial necromass C (MNC) and glomalin-related soil proteins (GRSP), are critical for soil organic carbon (SOC) stability. However, little is known about how climate change affects microbial-derived C within soil aggregates and its contribution to SOC. Here, we investigated the effects of 4-year warming (ca. 0.68 °C) and precipitation reduction (ca. −50% and −25%) on soil GRSP and MNC concentrations in semi-arid secondary grasslands and combined these results with a meta-analysis for GRSP. Results showed that warming increased MNC and its contribution to SOC, while precipitation reduction decreased MNC concentrations. Surprisingly, precipitation reduction increased GRSP concentrations and their contribution to SOC. Field experiments and meta-analysis also revealed that SOC and total nitrogen were negatively correlated with the C contribution of GRSP. Given the chemical recalcitrance of GRSP, this result may imply that the decrease in C and N content under precipitation reduction stimulates the formation of GRSP to enhance its subsequent protection of the SOC pool. Mechanistically, soil biota composition and its interactions dominated the variation in MNC between aggregates and climate change scenarios. The highest MNC concentrations in microaggregates may be attributed to higher fungal diversity, more stable multi-trophic networks, and weaker negative interactions across trophic levels. In addition, precipitation reduction significantly increased the abundance of modules in the multi-trophic network associated with SOC and MNC degradation, which were positively correlated with GRSP accumulation. These results suggest that climate change may regulate SOC dynamics by altering micro-food web structure in soil aggregates. Our study has direct implications for predicting the dynamics and stability of SOC fractions under future climate scenarios.
{"title":"Divergent responses of soil glomalin and microbial necromass to precipitation reduction: New perspectives from soil aggregates and multi-trophic networks","authors":"Xing Wang , Fang Chen , Jia Zeng , Zhengchen Wang , Yongzhong Feng , Xiaojiao Wang , Chengjie Ren , Gaihe Yang , Zekun Zhong , Xinhui Han","doi":"10.1016/j.soilbio.2024.109638","DOIUrl":"10.1016/j.soilbio.2024.109638","url":null,"abstract":"<div><div>Global warming and increased drought are predicted to alter soil aggregation, biota composition, and carbon (C) balance. Microbial-derived C, such as microbial necromass C (MNC) and glomalin-related soil proteins (GRSP), are critical for soil organic carbon (SOC) stability. However, little is known about how climate change affects microbial-derived C within soil aggregates and its contribution to SOC. Here, we investigated the effects of 4-year warming (ca. 0.68 °C) and precipitation reduction (ca. −50% and −25%) on soil GRSP and MNC concentrations in semi-arid secondary grasslands and combined these results with a meta-analysis for GRSP. Results showed that warming increased MNC and its contribution to SOC, while precipitation reduction decreased MNC concentrations. Surprisingly, precipitation reduction increased GRSP concentrations and their contribution to SOC. Field experiments and meta-analysis also revealed that SOC and total nitrogen were negatively correlated with the C contribution of GRSP. Given the chemical recalcitrance of GRSP, this result may imply that the decrease in C and N content under precipitation reduction stimulates the formation of GRSP to enhance its subsequent protection of the SOC pool. Mechanistically, soil biota composition and its interactions dominated the variation in MNC between aggregates and climate change scenarios. The highest MNC concentrations in microaggregates may be attributed to higher fungal diversity, more stable multi-trophic networks, and weaker negative interactions across trophic levels. In addition, precipitation reduction significantly increased the abundance of modules in the multi-trophic network associated with SOC and MNC degradation, which were positively correlated with GRSP accumulation. These results suggest that climate change may regulate SOC dynamics by altering micro-food web structure in soil aggregates. Our study has direct implications for predicting the dynamics and stability of SOC fractions under future climate scenarios.</div></div>","PeriodicalId":21888,"journal":{"name":"Soil Biology & Biochemistry","volume":"200 ","pages":"Article 109638"},"PeriodicalIF":9.8,"publicationDate":"2024-10-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142450254","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}