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Precipitation and diameter affect wood decomposition both directly and indirectly via deadwood traits and position 降水量和直径会直接影响木材的分解,也会通过枯木的特性和位置间接影响木材的分解
IF 9.8 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2024-09-25 DOI: 10.1016/j.soilbio.2024.109604
Wanying Yu , Congwen Wang , Johannes H.C. Cornelissen , Xuehua Ye , Xuejun Yang , Qingguo Cui , Zhenying Huang , Deli Wang , Guofang Liu
Woody plants are important components of dryland ecosystems. Our understanding of wood decomposition in drylands, an important component of biogeochemical cycling, is poor compared to that in mesic ecosystems. To uncovering the complex interactive effects of the different key drivers, we studied the effects of precipitation, position (aboveground and belowground), wood size and litter quality of plant species (four to five local species and one widespread woody species) on woody litter decomposition rates along a precipitation gradient from 37 to 369 mm, spanning five dryland sites. Wood dry matter content (DMC) was a critical negative predictor of wood decomposition in water-limited ecosystems. Thicker woody litter had lower decomposition rates (k values) directly because of smaller relative surface exposure, and indirectly through higher wood DMC or lower bark mass ratio (bark mass divided by wood mass for a given branch length). Mean annual precipitation (MAP) increased the k values both directly, and indirectly by decreasing the wood DMC and increasing the bark mass ratio due to species turnover. The k values of buried woody litter were mostly two to three times higher than litter on the soil surface, but not different at the extremely arid site. A steeper slope of the relationship between overall woody litter quality (particularly wood DMC) or annual precipitation and k values was observed belowground than aboveground, as related to the higher moisture belowground than aboveground. These findings highlight the complex interactions among climate (precipitation), litter position, size and quality on wood decomposition in drylands, thereby helping to improve our mechanistic understanding of dryland woody litter decomposition. We conclude that wood decomposition at the regional and local scales will influence biogeochemical cycling in drylands under future climate change through both direct effects of moisture and indirect effects of litter quality characteristics.
木本植物是旱地生态系统的重要组成部分。作为生物地球化学循环的一个重要组成部分,我们对旱地木材分解的了解还不如中生生态系统。为了揭示不同关键驱动因素之间复杂的交互作用,我们沿着从 37 毫米到 369 毫米的降水梯度研究了降水、植物物种(四到五个本地物种和一个广布的木本物种)的位置(地上和地下)、木材大小和枯落物质量对木质枯落物分解率的影响。在水分有限的生态系统中,木材干物质含量(DMC)是木材分解的一个关键负预测因子。较厚的枯落物分解率(k 值)较低,直接原因是相对表面暴露较小,间接原因是木材干物质含量较高或树皮质量比(给定树枝长度下树皮质量除以木材质量)较低。年平均降水量(MAP)会直接增加 k 值,也会因物种更替而降低木材 DMC 或增加树皮质量比,从而间接增加 k 值。埋藏在地下的木质废弃物的 k 值大多比土壤表面的废弃物高出 2 到 3 倍,但在极度干旱的地点并无差异。地下木质废弃物总体质量(尤其是木质 DMC)或年降水量与 k 值之间的关系斜率陡于地上,这与地下湿度高于地上有关。这些发现凸显了气候(降水)、枯落物位置、大小和质量对旱地木材分解的复杂相互作用,从而有助于提高我们对旱地木质枯落物分解机理的认识。我们的结论是,在未来气候变化下,区域和地方尺度上的木材分解将通过水分的直接影响和枯落物质量特征的间接影响来影响旱地的生物地球化学循环。
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引用次数: 0
Litter mixture effects on nitrogen dynamics during decomposition predominantly vary among biomes but little with litter identity, diversity and soil fauna 垃圾混合物对分解过程中氮动态的影响主要因生物群落而异,但与垃圾特性、多样性和土壤动物群的关系不大
IF 9.8 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2024-09-24 DOI: 10.1016/j.soilbio.2024.109602
Shixing Zhou , Olaf Butenschoen , I. Tanya Handa , Matty P. Berg , Brendan McKie , Congde Huang , Stephan Hättenschwiler , Stefan Scheu
Nitrogen (N) is essential for net primary production, with much of the required N in terrestrial ecosystems derived from recycling via litter decomposition. The diversity and identity of plant species and decomposer organisms affect N cycling during litter decomposition, yet the generality and magnitude of these effects remain uncertain. To fill this gap, a decomposition experiment with four leaf litter species that differed widely in initial litter quality was conducted including single species and all possible multispecies mixtures, with and without microarthropods access across a broad latitudinal gradient covering four major forest biomes of the Northern Hemisphere. The results showed that leaf litter N dynamics (both N loss and N immobilization) in single species treatments depended primarily on litter species identity and the local environmental context. We found strong mixture effects, that overall tended to increase N loss and to reduce 15N transfer. The relative mixture effects on N dynamics differed among forest biomes, but were little affected by the other factors we manipulated. The N loss of individual litter species in mixtures not only depended on litter identity and soil microarthropod access, but also on forest biomes; while 15N transfer depended strongly on litter mixing, independently of litter species richness or composition of the mixtures. Litter N dynamics were mainly driven by a small subset of litter traits, regardless of species richness and microarthropod access. Overall, our results highlight that litter mixture strongly affects N dynamics during decomposition, with the mixture effects predominantly varying among forest biomes but little with litter identity, diversity and microarthropod access. To improve predictions on how changes in tree species composition and diversity may impact nutrient dynamics in forest ecosystems in face of increasing N deposition, interactions between litter and soil but also within litter mixtures need closer attention.
氮(N)是净初级生产所必需的,陆地生态系统所需的大部分氮来自于垃圾分解过程中的循环。植物物种和分解生物的多样性和特性会影响枯落物分解过程中的氮循环,但这些影响的普遍性和程度仍不确定。为了填补这一空白,我们在北半球四个主要森林生物群落的广阔纬度梯度上,对初始枯落物质量差异很大的四种枯落物进行了分解实验,包括单一物种和所有可能的多物种混合物,以及有无微型节肢动物的进入。结果表明,单一物种处理中的落叶氮动态(包括氮损失和氮固定)主要取决于落叶物种特征和当地环境背景。我们发现了强烈的混合物效应,总体上倾向于增加氮的损失和减少 15N 的转移。不同森林生物群落对氮动态的相对混合物效应各不相同,但几乎不受我们操纵的其他因素的影响。混合物中单个枯落物物种的氮损失不仅取决于枯落物的特征和土壤中微型节肢动物的进入,还取决于森林生物群落;而15N转移在很大程度上取决于枯落物的混合,与枯落物物种的丰富程度或混合物的组成无关。枯落物氮的动态主要受一小部分枯落物特征的驱动,与物种丰富度和微节肢动物的进入无关。总之,我们的研究结果突出表明,枯落物混合物对分解过程中的氮动态有很大影响,混合物的影响主要因森林生物群落而异,但与枯落物的特征、多样性和微节肢动物的进入关系不大。为了更好地预测在氮沉积不断增加的情况下,树种组成和多样性的变化会如何影响森林生态系统的养分动态,需要更密切地关注枯落物与土壤之间以及枯落物混合物内部的相互作用。
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引用次数: 0
Investigating drivers of free-living diazotroph activity in paddy soils across China 调查中国各地水稻田土壤中自由重氮营养体活动的驱动因素
IF 9.8 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2024-09-24 DOI: 10.1016/j.soilbio.2024.109601
Xiaomin Wang , Min Wu , Zhijun Wei , Christina Hazard , Graeme W. Nicol , Huicheng Zhao , Binbin Liu , Jinbo Zhang , Jun Shan , Xiaoyuan Yan
Microbially mediated N fixation is widespread in rice paddy ecosystems and crucial in maintaining soil fertility. However, our understanding of the factors determining the distribution of free-living diazotrophic microorganisms that perform this process in paddy fields is limited. This study investigated the spatial distribution and factors influencing presence and potential activity of free-living microorganisms capable of N2 fixation in addition to dissimilatory nitrate reduction to ammonium (DNRA), anaerobic ammonium oxidation (anammox), and denitrification in 50 paddy soils across China. Using 15N isotope tracing in laboratory incubations and microbial community analysis via metagenomics, we demonstrate that paddy soils may represent a previously underappreciated hotspot for N2 fixation with mean potential rates of 24.4 ± 17.8 nmol N g−1 h−1, 10-fold higher than DNRA (2.55 ± 0.4 nmol N g−1 h−1), and could counterbalance a portion of N2 losses through anammox and denitrification (9.24 ± 1.1 nmol N g−1 h−1). Site longitude and organic carbon (C) concentrations, as well as the diazotrophic community composition, were the dominant abiotic and biotic factors accounting for regional variations in potential N2 fixation rates. The N2 metabolic pathways predicted from the metagenome-assembled genomes (MAGs) revealed significant co-occurrence of the diazotroph marker gene nifH with denitrification-associated genes (nirS/K and nosZ) and organic C oxidation-related genes (yiaY and galM). Furthermore, enzymes involved in organic C oxidation, particularly glycoside hydrolases and glycosyltransferases, were not only phenotypically correlated with free-living N2 fixation rates but were also identified in nifH-containing MAGs, indicating the heterotrophic capabilities of diazotrophs in paddy soils. Collectively, our results underscore the substantial contribution of free-living N2 fixation to soil N fertility in paddy fields, and highlight the importance of coupling organic C oxidation with nitrate reduction to enhance N2 fixation.
微生物介导的氮固定在水稻田生态系统中非常普遍,对保持土壤肥力至关重要。然而,我们对决定水稻田中执行这一过程的自由生活重氮微生物分布的因素了解有限。本研究调查了中国 50 块水稻田土壤中除异氨硝酸盐还原(DNRA)、厌氧氨氧化(anammox)和反硝化作用外,还能固定 N2 的自由生活微生物的空间分布及其存在和潜在活性的影响因素。利用实验室培养的 15N 同位素追踪和元基因组学的微生物群落分析,我们证明水稻田土壤可能是以前未被充分重视的 N2 固定热点,其平均潜在速率为 24.4 ± 17.8 nmol N g-1 h-1,比 DNRA(2.55 ± 0.4 nmol N g-1 h-1)高 10 倍,并可抵消通过厌氧氧化和反硝化(9.24 ± 1.1 nmol N g-1 h-1)损失的部分 N2。地点的经度和有机碳(C)浓度以及重氮营养群落组成是造成潜在 N2 固定率区域差异的主要非生物和生物因素。根据元基因组组装基因组(MAGs)预测的 N2 代谢途径显示,重氮营养体标记基因 nifH 与反硝化相关基因(nirS/K 和 nosZ)和有机碳氧化相关基因(yiaY 和 galM)显著共存。此外,参与有机碳氧化的酶,特别是糖苷水解酶和糖基转移酶,不仅在表型上与自由生活的 N2 固定率相关,而且在含 nifH 的 MAGs 中也被鉴定出来,这表明稻田土壤中重氮营养体具有异养能力。总之,我们的研究结果强调了自由生活的氮固定对稻田土壤氮肥的巨大贡献,并突出了将有机碳氧化与硝酸盐还原结合起来以提高氮固定的重要性。
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引用次数: 0
Reindeer shape soil methanogenic and methanotrophic communities in subarctic fen peatlands, with a minor impact on methane emissions — A field study 驯鹿塑造亚北极沼泽泥炭地的土壤产甲烷和甲烷营养群落,对甲烷排放影响较小--一项实地研究
IF 9.8 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2024-09-22 DOI: 10.1016/j.soilbio.2024.109590
Raija Laiho , Petri Salovaara , Päivi Mäkiranta , Krista Peltoniemi , Timo Penttilä , Tuomas Rajala , Jenni Hultman , Mika Korkiakoski , Hannu Fritze
Laboratory and field studies with other grazer species suggest that reindeer (Rangifer tarandus L.) grazing on northern peatlands could shape the peat soil microbial communities and lead to higher ecosystem methane (CH4) emissions. We investigated this at two sedge fens in northern Finland, Lompolojänkkä and Halssiaapa, in experiments where reindeer grazing presence or absence was achieved with exclosure fences, and the effects of reindeer droppings were evaluated comparing dropping additions either on peat surface or trampled into the peat to controls with no droppings. Active soil methanogen and methanotroph communities were analyzed by metatranscriptomics. Soil CH4 fluxes were quantified with manual chambers and portable gas analyzer. Reindeer presence and dropping additions were both connected to differences in the soil communities as compared to controls (no presence or no droppings). The responses differed between the two fens. Activity of rumen microbes in peat could not be detected. Structural equation models indicated that the ecosystem CH4 flux in both fens depended on measurement year and sedge leaf area. At Halssiaapa trampled droppings, and at Lompolojänkkä both surface and trampled droppings reduced the sedge leaf area. While at Halssiaapa the dropping effect was not altogether statistically significant, in Lompolojänkkä surface droppings reduced the CH4 flux both directly and through the reduced leaf area. In conclusion, while both reindeer presence and dropping addition were diversely reflected in the active soil communities, reindeer effects on the CH4 flux were indirect and mediated via vegetation. The results contrast our earlier laboratory findings, and i) caution against liberal generalizations from lab studies to field conditions in peatlands, as well as ii) point to a need for rigorous multivariate analyses for deciphering the complex interactions governing the functions of these ecosystems.
对其他食草物种的实验室和实地研究表明,在北方泥炭地放牧驯鹿(Rangifer tarandus L.)可能会改变泥炭土壤微生物群落,导致生态系统甲烷(CH4)排放量增加。我们在芬兰北部的两个莎草沼泽(Lompolojänkkä 和 Halssiaapa)进行了这方面的研究,在实验中,驯鹿放牧与否是通过围栏来实现的,并对驯鹿粪便的影响进行了评估,比较了在泥炭表面添加粪便或将粪便踩入泥炭与不添加粪便的对照组。通过元转录组学分析了活跃的土壤甲烷原和甲烷营养群落。土壤中的甲烷通量则通过手动操作室和便携式气体分析仪进行量化。与对照组(无驯鹿或无粪便)相比,驯鹿的存在和粪便的添加都与土壤群落的差异有关。两个沼泽地的反应不同。泥炭中瘤胃微生物的活性无法检测。结构方程模型表明,两个沼泽地生态系统的甲烷通量取决于测量年份和莎草叶面积。在 Halssiaapa 和 Lompolojänkkä,践踏粪便和地表粪便都会减少莎草的叶面积。虽然在哈尔西亚帕,践踏粪便的影响在统计学上并不显著,但在隆波罗耶恩卡,表面粪便直接或通过减少叶面积减少了甲烷通量。总之,驯鹿的存在和粪便的增加在活跃的土壤群落中都有不同的反映,但驯鹿对甲烷通量的影响是间接的,是通过植被介导的。这些结果与我们早先的实验室研究结果形成了鲜明对比,(i) 提醒我们不要将实验室研究结果随意归纳到泥炭地的实地条件中,(ii) 指出需要进行严格的多元分析,以解读支配这些生态系统功能的复杂相互作用。
{"title":"Reindeer shape soil methanogenic and methanotrophic communities in subarctic fen peatlands, with a minor impact on methane emissions — A field study","authors":"Raija Laiho ,&nbsp;Petri Salovaara ,&nbsp;Päivi Mäkiranta ,&nbsp;Krista Peltoniemi ,&nbsp;Timo Penttilä ,&nbsp;Tuomas Rajala ,&nbsp;Jenni Hultman ,&nbsp;Mika Korkiakoski ,&nbsp;Hannu Fritze","doi":"10.1016/j.soilbio.2024.109590","DOIUrl":"10.1016/j.soilbio.2024.109590","url":null,"abstract":"<div><div>Laboratory and field studies with other grazer species suggest that reindeer (<em>Rangifer tarandus</em> L.) grazing on northern peatlands could shape the peat soil microbial communities and lead to higher ecosystem methane (CH<sub>4</sub>) emissions. We investigated this at two sedge fens in northern Finland, Lompolojänkkä and Halssiaapa, in experiments where reindeer grazing presence or absence was achieved with exclosure fences, and the effects of reindeer droppings were evaluated comparing dropping additions either on peat surface or trampled into the peat to controls with no droppings. Active soil methanogen and methanotroph communities were analyzed by metatranscriptomics. Soil CH<sub>4</sub> fluxes were quantified with manual chambers and portable gas analyzer. Reindeer presence and dropping additions were both connected to differences in the soil communities as compared to controls (no presence or no droppings). The responses differed between the two fens. Activity of rumen microbes in peat could not be detected. Structural equation models indicated that the ecosystem CH<sub>4</sub> flux in both fens depended on measurement year and sedge leaf area. At Halssiaapa trampled droppings, and at Lompolojänkkä both surface and trampled droppings reduced the sedge leaf area. While at Halssiaapa the dropping effect was not altogether statistically significant, in Lompolojänkkä surface droppings reduced the CH<sub>4</sub> flux both directly and through the reduced leaf area. In conclusion, while both reindeer presence and dropping addition were diversely reflected in the active soil communities, reindeer effects on the CH<sub>4</sub> flux were indirect and mediated via vegetation. The results contrast our earlier laboratory findings, and i) caution against liberal generalizations from lab studies to field conditions in peatlands, as well as ii) point to a need for rigorous multivariate analyses for deciphering the complex interactions governing the functions of these ecosystems.</div></div>","PeriodicalId":21888,"journal":{"name":"Soil Biology & Biochemistry","volume":"199 ","pages":"Article 109590"},"PeriodicalIF":9.8,"publicationDate":"2024-09-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142326510","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Species-specific impact of protists in controlling litter decomposition 原生生物在控制垃圾分解方面的物种特异性影响
IF 9.8 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2024-09-22 DOI: 10.1016/j.soilbio.2024.109598
Yuxin Wang , Thomas Edison E. dela Cruz , James Kennard S. Jacob , Stefan Geisen
Protists affect soil microbiome composition and functioning, potentially increasing litter decomposition and plant growth. Yet, the role of different protist species, individually or in combinations, in regulating microbial-mediated litter decomposition remains unknown, as well as if these interactions feedback to plant growth. Using a full-factorial design of three protist species combinations with bacterial and fungal communities, we found that only one protist species reduced litter decomposition by 19%, with other species and combinations not affecting litter decomposition. Despite a positive correlation between plant growth and litter decomposition, we did not observe protist-induced changes in plant growth. Overall, our results highlight that protists affect litter decomposition in a species-specific manner, including reducing litter decomposition.
原生生物会影响土壤微生物组的组成和功能,从而有可能促进废弃物分解和植物生长。然而,不同的原生生物物种(单独或组合)在调节微生物介导的垃圾分解过程中的作用,以及这些相互作用是否会对植物生长产生反馈作用,目前仍是未知数。通过对三种原生动物物种组合与细菌和真菌群落进行全因子设计,我们发现只有一种原生动物物种能使垃圾分解量减少 19%,其他物种和组合均不影响垃圾分解。尽管植物生长与垃圾分解之间存在正相关,但我们并没有观察到原生动物诱导的植物生长变化。总之,我们的研究结果突出表明,原生动物以物种特有的方式影响着垃圾的分解,包括减少垃圾的分解。
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引用次数: 0
Phase transformation of schwertmannite changes microbial iron and sulfate-reducing processes in flooded paddy soil and decreases arsenic accumulation in rice (Oryza sativa L.) 白云石的相变改变了水稻淹水土壤中微生物的铁和硫酸盐还原过程,并减少了水稻(Oryza sativa L.)的砷积累
IF 9.8 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2024-09-21 DOI: 10.1016/j.soilbio.2024.109600
Ru Wang , Xinxin Wang , Hua Li , Xiaomeng Wang , Zengping Ning , Chengshuai Liu , Lixiang Zhou , Guanyu Zheng
Rice (Oryza sativa L.) is known to accumulate inorganic arsenic (iAs) and dimethylarsenate (DMA) in its grains, which threatens both human health and rice yield. Although schwertmannite, a metastable Fe (Ⅲ)-oxyhydroxysulfate mineral with extremely high adsorption capacity for iAs, has been proposed to remediate paddy soil to decrease As accumulation in rice, it remains unclear whether the phase transformation of schwertmannite would occur in flooded paddy soil and how its phase transformation changes the soil microbial processes that impact the accumulation of iAs and DMA in grains. Here, we found that amending As-contaminated paddy soil with 0.5%–1% (w/w) schwertmannite decreased the accumulation of iAs and DMA in grains by 37.41%–43.29% and 50.60%–73.89%, respectively, even though schwertmannite has transformed to goethite and secondary FeS was formed in both rhizosphere and bulk soils. The phase transformation of schwertmannite released a considerable amount of SO42− into porewater, thereby increasing the abundances of both sulfate-reducing bacteria and the dsrB gene but decreasing the abundance of iron-reducing bacteria. This result suggested that schwertmannite phase transformation has promoted sulfate-reducing process and weakened iron-reducing process in flooded soil. Such promoted sulfate-reducing process and weakened iron-reducing process in paddy soil can decrease the reductive dissolution of As-bearing (oxyhydr)oxides, increase the formation of secondary FeS mineral for decreasing porewater As concentration, and strengthen the role of Fe plaque as a barrier for As absorption by rice. Additionally, the application of schwertmannite has decreased the abundance of arsM gene and weakened As methylation process in soil. Therefore, the effective decrease of iAs and DMA accumulation in rice grains by schwertmannite can not only be ascribed to the adsorption capacity of schwertmannite for As and the adsorption or incorporation of As by transformation products, but also contributed by the promoted sulfate-reducing process and the weakened iron-reducing process in flooded paddy soil.
众所周知,水稻(Oryza sativa L.)的谷粒中会积累无机砷(iAs)和二甲基砷酸酯(DMA),这对人类健康和水稻产量都构成了威胁。尽管有人建议用一种对 iAs 具有极高吸附能力的可蜕变铁(Ⅲ)-氧羟基硫酸盐矿物--施华洛世奇(schwertmannite)来修复稻田土壤,以减少水稻中砷的积累,但施华洛世奇是否会在水淹的稻田土壤中发生相变,以及其相变如何改变土壤微生物过程,从而影响 iAs 和 DMA 在谷物中的积累,这些问题仍不清楚。在这里,我们发现用 0.5%-1%(w/w)的石墨化黄铜改良砷污染的水稻土,可使 iAs 和 DMA 在谷物中的积累分别减少 37.41%-43.29% 和 50.60%-73.89% ,即使石墨化黄铜已转化为鹅辉石,并在根瘤菌层和大体积土壤中形成了次生 FeS。白云母的相变向孔隙水释放了大量的 SO42-,从而增加了硫酸盐还原菌和 dsrB 基因的丰度,但降低了铁还原菌的丰度。这一结果表明,在水淹土壤中,石墨化相变促进了硫酸盐还原过程,削弱了铁还原过程。这种促进了硫酸盐还原过程和削弱了铁还原过程的水稻土壤可减少含砷氧化物的还原溶解,增加次生 FeS 矿物的形成以降低孔隙水的砷浓度,并加强铁斑作为水稻吸收砷的屏障的作用。此外,施用施瓦剂降低了土壤中 arsM 基因的丰度,削弱了土壤中砷的甲基化过程。因此,施用白云石可有效减少水稻籽粒中 iAs 和 DMA 的积累,这不仅归因于白云石对 As 的吸附能力和转化产物对 As 的吸附或掺入,还与水淹稻田土壤中硫酸盐还原过程的促进和铁还原过程的减弱有关。
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引用次数: 0
A rhizosphere effect promotes the persistence of gas oxidization activity in soil 根圈效应促进了土壤中气体氧化活动的持久性
IF 9.8 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2024-09-20 DOI: 10.1016/j.soilbio.2024.109599
Anne de la Porte , Audrey-Anne Durand , Joann Whalen , Étienne Yergeau , Philippe Constant
Labile carbon and nutrients of the rhizosphere promote the activity of trace gas oxidizing bacteria (TGOB), but the capacity of the rhizosphere effect to support their persistence upon activation has received less attention. Here, we hypothesized that the activation response of TGOB in soil before planting is proportional to the persistence of their activity after wheat growth. The TGOB were activated in sandy-loam and peat soils under a static atmosphere containing elevated concentration of hydrogen (H2), carbon monoxide (CO) or methane (CH4). Our hypothesis was proven to hold true in sandy-loam soil, whereas higher organic matter in peat soil was less favourable for the persistence of TGOB activity. We conclude that the energy potential of the trace gas oxidation reaction and soil nutrients both intervein in the persistence of TGOB activity.
根瘤菌层的易变碳和养分可促进痕量气体氧化细菌(TGOB)的活性,但根瘤菌层效应在激活后支持其持续活性的能力却较少受到关注。在此,我们假设种植前土壤中 TGOB 的活化反应与小麦生长后其活性的持续性成正比。在含有高浓度氢气(H2)、一氧化碳(CO)或甲烷(CH4)的静态环境下,TGOB 在沙壤土和泥炭土中被活化。事实证明,我们的假设在沙壤土中成立,而泥炭土中较高的有机物则不利于 TGOB 活性的持续。我们得出的结论是,痕量气体氧化反应的能量潜力和土壤养分都与 TGOB 活性的持续性有关。
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引用次数: 0
An optimised molecular-based method for ecological study of tardigrades in soils 基于分子的土壤沙丁鱼生态研究优化方法
IF 9.8 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2024-09-19 DOI: 10.1016/j.soilbio.2024.109597
Zi-Yang He , Hang-Wei Hu , Keren Wu , Li Bi , Shuo Na , Anthony Weatherley , Michael Nash , Ji-Zheng He
To improve approaches for studying soil tardigrades, we compared three tardigrade extraction methods, including centrifugal flotation, Baermann funnel, and Whitehead tray, and found that the Whitehead tray method outperformed the two others. We optimised the Whitehead tray extraction condition under various soil pre-treatment processes, sample sizes, light exposure, and extraction time. We found that extending light exposure of non-sieved soils facilitates the extraction of tardigrades. We sequenced the DNA extracted from isolated tardigrade individuals and environmental soil samples, and found that tardigrade DNA extracts yielded a 173-fold increase in the proportion of tardigrade sequences and a 12-fold improvement in the estimation of tardigrade diversity.
为了改进研究土壤中游尸的方法,我们比较了三种游尸提取方法,包括离心浮选法、贝尔曼漏斗法和白石托盘法,发现白石托盘法的效果优于其他两种方法。我们在不同的土壤预处理过程、样本大小、光照和提取时间下对白石托盘提取条件进行了优化。我们发现,延长未筛分土壤的光照时间有利于提取沙丁鱼。我们对从分离的沙丁鱼个体和环境土壤样本中提取的 DNA 进行了测序,发现沙丁鱼 DNA 提取物中沙丁鱼序列的比例增加了 173 倍,沙丁鱼多样性的估计值提高了 12 倍。
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引用次数: 0
Study of soil heterotrophic respiration as a function of soil moisture under different land covers 不同土地覆盖下土壤异养呼吸作用与土壤水分关系的研究
IF 9.8 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2024-09-18 DOI: 10.1016/j.soilbio.2024.109593
Nishadini Widanagamage, Eduardo Santos, Charles W. Rice, Andres Patrignani
The relationship between soil heterotrophic respiration (Rh) and soil moisture has been often studied using disturbed soil samples and simple gravimetric and volumetric soil moisture indicators. The objective of this study was to investigate the relationship between Rh and soil moisture in terms of water-filled porosity (WFP), matric potential (Ψm), and relative soil gas diffusivity (Dp/Do) using undisturbed soil cores obtained under different land covers. Soil CO2 efflux, WFP, and Ψm were measured in undisturbed soil samples (250 cm3) collected in the 0–5 cm soil layer (without any vegetation or living roots) under laboratory conditions by combining a CO2 gas analyzer, a scale, and precision mini-tensiometers. For each site and land cover, we also measured soil chemical properties, soil physical properties, and soil microbial composition using phospholipid fatty acid analysis. Grassland soils had the largest total microbial biomass (6275 ng g−1), followed by soils from riparian (5327 ng g−1), and cropland (2745 ng g−1) sites. Bacteria were the dominant group representing 46% (SD = 5%) of the total microbial biomass across all sites and land covers. Maximum Rh was 1.88 (SD = 0.40) μmol CO2 m−2 s−1 in grassland, 1.64 (SD = 0.82) μmol CO2 m−2 s−1 in riparian, and 0.94 (SD = 0.56) μmol CO2 m−2 s−1 in cropland soils. Considering all land cover and soil types, our observations revealed that peak Rh occurred at mean WFP = 0.81 ,Ψm = −6 kPa, and Dp/Do = 0.003. Thus, we recommend avoiding the traditional field capacity definition of −33 kPa for representing peak microbial activity. Water-filled porosity was a more consistent predictor of Rh than Ψm or Dp/Do across soils with contrasting organic matter content, total microbial biomass, soil texture, and soil structure.
土壤异养呼吸作用(Rh)与土壤湿度之间的关系通常是通过扰动土壤样本和简单的重量和体积土壤湿度指标来研究的。本研究的目的是利用在不同土地覆盖下获得的未扰动土芯,从充水孔隙度(WFP)、母势(Ψm)和相对土壤气体扩散率(Dp/Do)的角度研究 Rh 与土壤湿度之间的关系。在实验室条件下,结合二氧化碳气体分析仪、秤和精密微型张力计,对采集的 0-5 厘米土层(无任何植被或活根)未扰动土壤样本(250 立方厘米)中的土壤二氧化碳流出量、WFP 和 Ψm 进行了测量。对于每个地点和土地覆盖层,我们还测量了土壤化学性质、土壤物理性质以及利用磷脂脂肪酸分析法测量的土壤微生物组成。草地土壤的微生物总生物量最大(6275 纳克/克-1),其次是河岸土壤(5327 纳克/克-1)和耕地土壤(2745 纳克/克-1)。细菌是主要的微生物群,占所有地点和土地覆盖层微生物生物量总量的 46%(SD = 5%)。草地的最大 Rh 值为 1.88(SD = 0.40)μmol CO2 m-2 s-1,河岸的最大 Rh 值为 1.64(SD = 0.82)μmol CO2 m-2 s-1,耕地土壤的最大 Rh 值为 0.94(SD = 0.56)μmol CO2 m-2 s-1。考虑到所有土地覆被和土壤类型,我们的观察结果表明,Rh 的峰值出现在平均 WFP = 0.81 ,Ψm = -6 kPa 和 Dp/Do = 0.003 时。因此,我们建议不要采用传统的-33 kPa 的实地容量定义来代表微生物活动峰值。在有机质含量、微生物总生物量、土壤质地和土壤结构各不相同的土壤中,充水孔隙度比Ψm 或 Dp/Do 对 Rh 的预测更为一致。
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引用次数: 0
Earthworms in an enhanced weathering mesocosm experiment: Effects on soil carbon sequestration, base cation exchange and soil CO2 efflux 强化风化中层宇宙实验中的蚯蚓:对土壤固碳、碱基阳离子交换和土壤二氧化碳流出的影响
IF 9.8 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2024-09-18 DOI: 10.1016/j.soilbio.2024.109596
Arthur Vienne , Patrick Frings , Sílvia Poblador , Laura Steinwidder , Jet Rijnders , Jonas Schoelynck , Olga Vinduskova , Sara Vicca
Despite its attractiveness for long-term carbon dioxide removal (CDR), quantifying weathering and CDR rates for enhanced weathering is a significant challenge. Moreover, the role of soil organisms, such as earthworms, in enhancing silicate weathering (both physically and chemically) has been suggested, but there is limited quantitative data on how biota, especially earthworms, contribute to inorganic carbon sequestration. To address these gaps, we conducted a mesocosm experiment with earthworms and basalt.
Results indicate increases in clay and cation exchange, causing a weathering rate of over 10−12 mol total alkalinity m2 s−1, in range with other basalt experiments. Basalt amendment increased dissolved inorganic carbon export by only 4 g CO2 m−2. During the 4.5-month experiment, we observed neither a change in organic nor in inorganic carbon content.
In soils without earthworms, basalt amendment reduced soil CO₂ efflux by approximately 0.2 kg CO₂ m2, suggesting considerable CDR. This decrease was about two times larger than calculated inorganic CDR equivalents, suggesting changes in soil organic matter dynamics.
Interestingly, earthworms reversed the basalt-induced reduction in soil CO₂ efflux. This reversal was partly due to reduced export of dissolved inorganic carbon but mainly driven by increased organic matter decomposition. Our study highlights the importance of including organic carbon dynamics when evaluating the CDR potential of enhanced weathering.
尽管硅酸盐对长期清除二氧化碳(CDR)具有吸引力,但量化风化和强化风化的 CDR 率却是一项重大挑战。此外,蚯蚓等土壤生物在增强硅酸盐风化(物理和化学)中的作用已被提出,但有关生物群(尤其是蚯蚓)如何促进无机碳固存的定量数据却很有限。为了弥补这些不足,我们用蚯蚓和玄武岩进行了中观宇宙实验。结果表明,粘土和阳离子交换量增加,导致总碱度m2-s-1的风化率超过10-12摩尔,与其他玄武岩实验的结果一致。玄武岩修正仅增加了 4 克 CO2 m-2 的溶解无机碳输出。在为期 4.5 个月的实验中,我们既没有观察到有机碳含量的变化,也没有观察到无机碳含量的变化。在没有蚯蚓的土壤中,玄武岩改良剂使土壤中的 CO₂ 流出量减少了约 0.2 千克 CO₂ m2,这表明有相当大的 CDR。有趣的是,蚯蚓逆转了玄武岩诱导的土壤二氧化碳排出量减少。这种逆转的部分原因是溶解无机碳的输出减少,但主要原因是有机质分解增加。我们的研究强调了在评估风化增强的 CDR 潜力时将有机碳动态纳入其中的重要性。
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Soil Biology & Biochemistry
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