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Iron plaque in paddy: Formation, properties, functions, and applications 水稻中的铁质斑块:形成、性质、功能及应用
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-03-01 Epub Date: 2025-12-22 DOI: 10.1016/j.soilbio.2025.110075
Zhao-Feng Yuan , Tida Ge , Dong-Xing Guan , Bin He , Xiaokai Zhang , Yongfu Li , Zhenke Zhu , Gang Li , Pil Joo Kim , Georg Guggenberger , Minggang Xu , Jianping Chen , Yakov Kuzyakov
Iron (Fe) plaque is a ubiquitous feature formed on root surfaces of wetland plants (e.g., rice), resulting from the oxidation of Fe2+ to Fe3+ driven by radial oxygen loss from roots. Fe plaque formation is primarily driven by abiotic pathways: influx of water with dissolved Fe2+ from bulk soil to roots and rhizosphere, wherein Fe2+ is oxidized by O2 released from aerenchyma, and by reactive species (e.g., ∙HO, ∙NO2, ∙NO) produced by electron transport from Fe2+ within Fe plaque. Biotic pathways, mediated mainly by Fe-reducing and Fe-oxidizing bacteria in rhizosphere, regulate Fe plaque formation. Fe plaque is mainly composed of ferrihydrite (Fe2O3∙nH2O), goethite (α-FeOOH), lepidocrocite (γ-FeOOH), but may include siderite (FeCO3), and vivianite (Fe3(PO4)2). Soil properties, plant species, developmental stages and redox fluctuations substantially influence Fe plaque composition and formation rate, as well its dissolution. As a microbial and biogeochemical hotspot in paddy ecosystems, Fe plaque interacts extensively with nutrients and contaminants, influencing their bioavailability and plant uptake. With extensive reactive surface area and abundant functional groups, Fe plaque functions as both a barrier and reservoir for nutrients and contaminants. We developed the concept of “Fe circuit” to describe its dual functions on elemental cycling in rice rhizosphere. Fe plaque can be utilized for in-situ immobilizing or removing contaminants in paddy soil. This review offers a comprehensive perspective on Fe plaque and its potential to remediate contaminants in paddy soil and other wetlands.
铁(Fe)斑块是湿地植物(如水稻)根表面普遍存在的特征,是由根系径向氧损失驱动Fe2+氧化为Fe3+造成的。铁斑块的形成主要由非生物途径驱动:从大块土壤中溶解的Fe2+的水流入根部和根际,其中Fe2+被空气组织释放的O2氧化,以及铁斑块内Fe2+的电子传递产生的活性物质(例如∙HO,∙NO2,∙NO)。生物途径主要由根际铁还原菌和铁氧化菌介导,调控铁斑块的形成。铁斑块主要由水合铁(Fe2O3∙nH2O)、针铁矿(α-FeOOH)、绢云母(γ-FeOOH)组成,但也可能包括菱铁矿(FeCO3)和橄榄石(Fe3(PO4)2)。土壤性质、植物种类、发育阶段和氧化还原波动对铁斑块的组成和形成速率以及其溶解有很大影响。作为水稻生态系统中微生物和生物地球化学热点,铁斑块与养分和污染物广泛相互作用,影响其生物利用度和植物吸收。铁斑块具有广泛的活性表面积和丰富的官能团,既是营养物质和污染物的屏障,也是其储存库。我们提出了“铁回路”的概念来描述其在水稻根际元素循环中的双重功能。铁膜可用于水稻土的原位固定化或去除污染物。本文综述了稻田土和其他湿地中铁斑块及其修复污染物的潜力。
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引用次数: 0
Global patterns and soil controls governing terrestrial nitrogen cycling in response to experimental warming: A meta-analysis 响应实验变暖的全球模式和控制陆地氮循环的土壤控制:荟萃分析
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-03-01 Epub Date: 2025-12-16 DOI: 10.1016/j.soilbio.2025.110072
Sen-Mao Zhang , Wan-Jia Hu , Xin-Rong Shi , Robert L. Kallenbach , Zhi-You Yuan
Global warming is altering nitrogen (N) cycling in terrestrial ecosystems. However, it remains uncertain whether these alterations are consistent across different ecosystems and environmental gradients, and the underlying regulatory mechanisms are still poorly understood. We conducted a meta-analysis of 2496 observations from 262 experimental warming studies to assess global patterns in N cycle dynamics. Warming significantly increased belowground plant N, ammonium and nitrate N, net mineralization, nitrification, denitrification, N2O emissions, and leaching, while reducing N resorption efficiency and microbial N immobilization. These findings suggest that warming influences N fluxes more extensively than N pools, leading to greater overall N losses. The magnitude of warming, associated soil moisture changes, and initial soil pH emerged as key drivers of these responses, highlighting the strong dependence of N cycling on soil properties at the global scale. Meta-regression analysis further showed that warming beyond 2 °C could markedly reduce microbial N pool, disrupting N cycling across ecosystems. Responses were more pronounced in acidic soils (pH ≤ 6.5) than in non-acidic soils. Our findings indicate that plant roots act as important N sinks under warming. We recommend increased attention to the management of acidic soil ecosystems to mitigate their potential feedback effects on climate change. This work improves our understanding of climate–N cycle feedbacks and strengthens the basis for predictive models of biogeochemical cycling under future climate scenarios.
全球变暖正在改变陆地生态系统中的氮循环。然而,这些变化是否在不同的生态系统和环境梯度中是一致的仍然是不确定的,并且潜在的调节机制仍然知之甚少。我们对262项实验变暖研究的2496个观测值进行了荟萃分析,以评估全球氮循环动力学模式。增温显著增加了地下植物氮、铵态氮和硝态氮、净矿化、硝化、反硝化、N2O排放和淋溶,同时降低了氮的吸收效率和微生物氮的固定化。这些发现表明,变暖对氮通量的影响比氮库更广泛,导致更大的总氮损失。增温幅度、相关的土壤湿度变化和初始土壤pH值是这些响应的关键驱动因素,突出了全球尺度上氮循环对土壤性质的强烈依赖。meta回归分析进一步表明,升温超过2°C会显著减少微生物氮库,破坏生态系统的氮循环。酸性土壤(pH≤6.5)比非酸性土壤响应更明显。我们的研究结果表明,植物根系在变暖条件下起着重要的氮汇作用。我们建议增加对酸性土壤生态系统管理的关注,以减轻其对气候变化的潜在反馈效应。这项工作提高了我们对气候- n循环反馈的认识,并加强了未来气候情景下生物地球化学循环预测模型的基础。
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引用次数: 0
Membrane filtration as an effective alternative to manual isolation for soil tardigrade DNA extraction 膜过滤作为人工分离土壤缓步动物DNA提取的有效替代方法
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-03-01 Epub Date: 2025-12-29 DOI: 10.1016/j.soilbio.2025.110080
Zi-Kai Liu , Weidong Chen , Ju-Pei Shen , Zi-Yang He , Hang-Wei Hu , Dan-Ting Yu , Ji-Zheng He
Manual isolation of tardigrades for molecular analysis is time-consuming and limits large-scale biodiversity studies. To enhance the efficiency of soil tardigrade molecular research, we developed a membrane filtration method to enrich soil tardigrades and other microfauna (nematodes and rotifers) for DNA extraction and the subsequent sequencing analyses. Filtration accelerated the workflow and detected more tardigrade species than manual isolation, although all membrane extraction methods underestimate their relative abundance. Filtration with a 15 μm membrane yielded the highest richness, while community differences were mainly driven by soil type rather than extraction method. Our results highlight the potential of filtration approaches in saving sample processing time and improving the detection of tardigrade species richness.
人工分离缓步动物进行分子分析既耗时又限制了大规模的生物多样性研究。为了提高土壤缓步动物分子研究的效率,我们开发了一种膜过滤方法来富集土壤缓步动物和其他微动物(线虫和轮虫)的DNA提取和随后的测序分析。过滤加速了工作流程,比人工分离检测到更多的缓步动物种类,尽管所有的膜提取方法都低估了它们的相对丰度。15 μm膜过滤获得的丰富度最高,群落差异主要受土壤类型的影响,而不是受提取方式的影响。我们的研究结果突出了过滤方法在节省样品处理时间和提高缓步动物物种丰富度检测方面的潜力。
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引用次数: 0
Sensitivity of soil nutrient pools, but stability of microbial processes, under reduced rainfall and altered grazing management in northern mixed-grass prairie 降雨减少和放牧管理改变对北方混交草草原土壤养分库敏感性和微生物过程稳定性的影响
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-03-01 Epub Date: 2025-12-14 DOI: 10.1016/j.soilbio.2025.110071
Kimberly J. Komatsu , Kurt Reinhart , Sarah Alley , Lauren M. Porensky , Kevin R. Wilcox , Sally E. Koerner
Nutrient cycling is a soil function that may be impacted by global change-induced droughts and alterations to grazing pressure. While belowground responses to drought are increasingly studied, the combined effects of altered rainfall and grazing on soil nutrients and microbial processes remain poorly understood. We tested how a two-year rainfall reduction interacted with a grazing intensity gradient during drought and two years of recovery to influence soil nutrient pools and microbial processes at two northern mixed-grass prairie sites. Rainfall reductions decreased soil available P and micronutrients between 10 and 50 %, but increased soil NO3 up to 4-fold during drought and into recovery years. In contrast, bacterial and fungal community compositions and extracellular enzyme activities were relatively resistant to rainfall reduction and grazing intensity treatments. Together, these results highlight the sensitivity of soil nutrient pools to drought, contrasted with the relative stability of belowground microbial processes in semi-arid rangelands in the face of drought and grazing management strategies.
养分循环是一种土壤功能,它可能受到全球变化引起的干旱和放牧压力变化的影响。虽然地下对干旱的响应研究越来越多,但降雨变化和放牧对土壤养分和微生物过程的综合影响仍然知之甚少。我们测试了两年的降雨量减少如何与干旱期间的放牧强度梯度和两年的恢复相互作用,以影响两个北部混草草原的土壤养分库和微生物过程。降雨减少使土壤有效磷和微量养分减少10-50%,但在干旱期和恢复期土壤硝态氮增加4倍。相比之下,细菌和真菌群落组成和胞外酶活性对降雨减少和放牧强度处理具有相对的抗性。总之,这些结果突出了土壤养分库对干旱的敏感性,与面对干旱和放牧管理策略的半干旱牧场地下微生物过程的相对稳定性形成对比。
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引用次数: 0
Are home field advantage effects consistent across climate conditions and bedrock types? 主场优势效应在气候条件和基岩类型中是否一致?
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-03-01 Epub Date: 2025-12-18 DOI: 10.1016/j.soilbio.2025.110069
Maleaume Voirnesson , Xiangtai Wang , Richard Michalet
Home-field advantage (HFA) effects theory predicts that plant litters have higher mass loss in their home environment than away from home. Although there is an important increase in interest on the role of HFA effects in decomposition processes, their variation along environmental gradients is still poorly known. In particular, no studies have assessed how interactions between climate and bedrock types (calcareous vs. siliceous) affect HFA effects, although recent studies have shown that these interactions may influence decomposition processes. In order to fill this gap, we reciprocally incubated the litter of an evergreen and a deciduous species in the two forest types, on the two bedrocks and in six contrasting conditions of temperature and drought in France. The experiment was repeated three years with contrasting drought conditions. We modified a former formula to compute different HFA effects for the two litter types. Overall decay rates were higher in the least stressed climate conditions and on siliceous bedrocks but there was no simple interaction between climate and bedrock as found in previous studies (higher decay rates in calcareous than siliceous soils in wet conditions only). Home-field advantage effects were always positive but strongly increased and slightly decreased from dry to wet sites on calcareous and siliceous soils, respectively. Specifically, HFA effects became increasingly positive with decreasing rainfall continentality and increasing decay rate and these effects were significant on calcareous bedrocks only. Our results provide evidence that positive interactions between litter types and soil organisms increase with decreasing stress, in particular on calcareous bedrocks. They also highlight that HFA effects can contribute to positive feedbacks in ecosystem functioning and nutrient cycling in forest ecosystems.
主场优势效应理论预测,植物凋落物在主场环境中的质量损失要大于在客场环境中的质量损失。尽管人们对HFA在分解过程中的作用越来越感兴趣,但它们在环境梯度上的变化仍然知之甚少。特别是,没有研究评估气候和基岩类型(钙质与硅质)之间的相互作用如何影响HFA效应,尽管最近的研究表明,这些相互作用可能影响分解过程。为了填补这一空白,我们在法国的两种森林类型、两种基岩和六种不同的温度和干旱条件下,轮流孵化常绿和落叶物种的凋落物。该实验在不同的干旱条件下重复了三年。我们修改了先前的公式来计算两种凋落物类型的不同HFA效应。总体腐烂率在压力最小的气候条件下和硅质基岩上较高,但没有发现气候和基岩之间的简单相互作用(只有在潮湿条件下,钙质土壤的腐烂率高于硅质土壤)。在石灰质土壤和硅质土壤上,从干地到湿地,主场优势效应均为正,分别呈显著增加和轻微减少趋势。其中,HFA效应随着降雨大陆性的减小和衰减率的增大而增大,且仅对钙质基岩有显著影响。我们的研究结果提供了证据,表明凋落物类型和土壤生物之间的积极相互作用随着压力的减少而增加,特别是在钙质基岩上。他们还强调,HFA效应可以促进生态系统功能和森林生态系统养分循环的正反馈。
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引用次数: 0
Advancing predictive understanding of tree organic and inorganic nitrogen uptake across forest biomes 推进对森林生物群系树木有机和无机氮吸收的预测性认识
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-02-01 Epub Date: 2025-11-01 DOI: 10.1016/j.soilbio.2025.110027
Min Liu , Xingliang Xu , Peng Jin , Helge Bruelheide , Yakov Kuzyakov , Richard D. Bardgett , Wolfgang Wanek
Plants uptake nitrogen (N) from soils in inorganic forms, such as ammonium (NH4+) and nitrate (NO3), but also in the form of organic compounds like amino acids. Despite extensive research on terrestrial N cycling, the patterns and underpinning mechanisms of inorganic and organic N uptake by tree species across forest biomes remained very uncertain. To address this knowledge gap, we conducted field-based hydroponic labelling experiments on 34 tree species spanning from temperate to subtropical and tropical climate zones. We assessed uptake rates of nine common amino acids (15N and 13C dual-labelled) alongside with NH4+ and NO3 (15N-labelled) at micromolar concentrations. Root morphological traits, soil chemical properties, soil N pool sizes and microbial N functional genes were determined to assess their role in explaining differential N uptake among tree species and forest biomes. Our results demonstrated stable N uptake rates and preferences across all forest biomes but showed large differences among N forms. Such N uptake was predominantly affected by N intrinsic properties, followed by effects of soil properties and microbial N functional genes on soil N availability, while controls by tree root traits were weakest. Mean uptake rates of single amino acids contributed to 39 % of the total root N uptake, with NH4+ showing the highest (56 %), and NO3 showing the lowest uptake rates (5.0 %). Uptake rates of positively charged and high N% amino acids such as arginine, histidine, and lysine were fastest, i.e., 0.98, 0.81, and 0.78 μg N g−1 d. w. root h−1, respectively. Nitrogen uptake rates were faster when trees have longer and thinner fine roots, in soils with higher pH and phosphorus (P) availability and faster microbial N turnover. Our findings highlight the important role of organic N and NH4+ for tree nutrition and reveal how tree N uptake is influenced (in increasing importance) by tree root morphological traits, soil microbial N functional composition, soil resource availability, and N form intrinsic properties. These findings provide profound quantitative and predictive insights into our understanding of forest N sink processes, offering a scientific foundation for optimizing global forestry N management strategies in the context of environmental change.
植物以无机形式从土壤中吸收氮(N),如铵(NH4+)和硝酸盐(NO3 -),但也以有机化合物的形式,如氨基酸。尽管对陆地氮循环进行了广泛的研究,但森林生物群系树种对无机氮和有机氮的吸收模式和基本机制仍不确定。为了解决这一知识缺口,我们对34种树种进行了基于田间的水培标记实验,这些树种分布在温带、亚热带和热带气候区。我们评估了九种常见氨基酸(15N和13C双标记)以及NH4+和NO3 - (15N标记)在微摩尔浓度下的吸收率。根系形态特征、土壤化学性质、土壤氮库大小和微生物氮功能基因在不同树种和森林生物群落间氮吸收差异中的作用。我们的研究结果表明,所有森林生物群落的氮素吸收速率和偏好都很稳定,但氮素形态之间存在较大差异。氮素吸收主要受氮素内在特性的影响,其次是土壤特性和微生物氮功能基因对土壤氮素有效性的影响,而根系性状对土壤氮素有效性的影响最弱。单氨基酸的平均吸收率占根系总氮吸收率的39%,其中NH4+吸收率最高(56%),NO3 -吸收率最低(5.0%)。对带正电荷和高N%氨基酸如精氨酸、组氨酸和赖氨酸的吸收速率最快,分别为0.98、0.81和0.78 μg N g-1 d w根h-1。在pH和磷有效度较高、微生物氮周转快的土壤中,树木细根长、细根细的土壤吸收氮速率较高。我们的研究结果强调了有机氮和NH4+对树木营养的重要作用,并揭示了树木对N的吸收如何受到树木根系形态特征、土壤微生物N功能组成、土壤资源有效性以及树木和森林生物群落中N形态固有特性的影响(其重要性日益增加)。这些发现为我们对森林氮汇过程的理解提供了深刻的定量和预测见解,为优化环境变化背景下的全球森林氮管理策略提供了科学依据。
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引用次数: 0
From soil to symbiosis: elemental filtering in a termite-fungus mutualism 从土壤到共生:白蚁-真菌共生中的元素过滤
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-02-01 Epub Date: 2025-11-24 DOI: 10.1016/j.soilbio.2025.110045
Suzanne Schmidt , Kasun H. Bodawatta , Bertil Jensen Bille , Felix Krogh Vissing , Kolotchèlèma Simon Silué , N'golo A. Koné , Erin L. Cole , Søren Rosendahl , Jonathan Z. Shik , Michael Poulsen
All organisms require a balanced supply of over 20 chemical elements, and even small imbalances can limit performance and fitness. Organisms thus employ diverse adaptations for acquiring and regulating balanced combinations of these elemental resources. In farming mutualisms, adaptations of domesticated crops can guide the accumulation of critical elements from soil or mulched detritus for partner use. It is therefore reasonable to predict systematic shifts in elemental abundance and variance across farming stages – from substrate provisioning and crop assimilation to the final production of edible yield. We tested this hypothesis with fungus-farming termites that cultivate fungi in combs built from a mix of termite-provisioned organic matter and soil, in exchange for edible nutrient-rich fungal nodule structures. Using Inductively Coupled Plasma Mass Spectrometry (ICP-MS), we quantified 24 elements across fungus-farming stages – from soils, through termite guts and fresh and mature fungal combs, to final nodules. Our findings suggest 1) that termite foraging represents an initial nutritional filtering stage that enriches biogenic elemental building blocks for macronutrients (K, S, Na, and Ca) while reducing several non-biogenic and potentially toxic elements (As and Pb) and 2) fungal nodules constitute a final nutritional filtering stage that concentrates a suite of biogenic elements (P, K, S, Cu, and Zn) alongside accumulation of certain non-biogenic elements (Cd and Tl). Within fungus gardens, elemental compositions are homogenised in freshly-build combs relative to the mulch deposited from termite guts. These patterns suggest elemental filtering as reciprocal provisioning between farmers and crops, offering a framework to understand how complex mutualistic nutritional systems regulate and ultimately affect element cycling in soil ecosystems.
所有生物体都需要20多种化学元素的平衡供应,即使是很小的不平衡也会限制它们的表现和健康。因此,生物体采用不同的适应性来获取和调节这些元素资源的平衡组合。在农业互惠共生中,驯化作物的适应性可以引导土壤或被覆盖的碎屑中关键元素的积累,以供伴侣使用。因此,预测元素丰度和差异在各个农业阶段(从基质供应和作物同化到可食用产量的最终生产)的系统性变化是合理的。我们用种植真菌的白蚁测试了这一假设,白蚁在由白蚁提供的有机物质和土壤混合而成的蜂巢中培育真菌,以换取可食用的营养丰富的真菌结核结构。使用电感耦合等离子体质谱(ICP-MS),我们定量了24种元素在真菌养殖阶段-从土壤,通过白蚁肠道和新鲜和成熟的真菌梳,到最终的结核。我们的研究结果表明:1)白蚁的觅食代表了一个初始的营养过滤阶段,它丰富了大量营养元素(K、S、Na和Ca)的生物源元素构建块,同时减少了一些非生物源和潜在毒性元素(As和Pb); 2)真菌结核构成了一个最终的营养过滤阶段,它浓缩了一系列生物源元素(P、K、S、Cu和Zn),同时积累了某些非生物源元素(Cd和Tl)。在真菌花园中,相对于白蚁肠道沉积的覆盖物,元素组成在新建造的蜂巢中均质化。这些模式表明,元素过滤是农民和作物之间的相互供给,为理解复杂的互惠营养系统如何调节并最终影响土壤生态系统中的元素循环提供了一个框架。
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引用次数: 0
Quinone-loaded biochar amplifies soil N2O mitigation by enhancing electron transfer for N2O reduction 醌类负载的生物炭通过增强电子转移来减少N2O,从而增强土壤N2O的缓解作用
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-02-01 Epub Date: 2025-11-21 DOI: 10.1016/j.soilbio.2025.110040
Jiao Yuan , Dan Yuan , Tim J. Clough , Xinhui Liu , Lin Ma , Chunsheng Hu , Shuping Qin
Biochar facilitates the reduction of N2O to N2 by promoting denitrification through its electron shuttle function, a mechanism widely recognized as key to its role in mitigating soil N2O accumulation. This electron shuttle capacity is primarily attributed to surface redox-active functional groups, such as quinones and phenolic hydroxyls. Among these, quinone/hydroquinone (Q/QH2) groups serve as reversible redox pairs, enhancing electron transport efficiency through cyclic electron acceptance and donation. However, the mechanisms by which quinone functional groups regulate the electron-shuttling capacity of biochar, and thereby amplify its ability to promote complete denitrification and N2O mitigation, remain unclear. In this study, biochar with enhanced electron-shuttling capacity was prepared by incorporating redox-active quinone groups. The biochar's effectiveness in reducing soil N2O accumulation was evaluated by incorporating it into soil. Quinone-enhanced biochar (QBC) markedly enhanced the biochar's electron-shuttling function and reduced soil N2O accumulation by 82.3 % relative to a control biochar. Furthermore, quinone-loaded biochar increased the relative expression of Acidobacteria and upregulated the abundance of nosZ-II genes, resulting in lower N2O/(N2O + N2) ratios, lower residual NO3, and higher N2 accumulation that are consistent with more complete denitrification. Our results therefore indicate that the improved electron-shuttling function of biochar is consistent with more complete denitrification and enhanced N2O reduction. These findings indicate that incorporating quinone groups into biochar is a viable strategy to mitigate N2O accumulation by enhancing its electron-shuttling function.
生物炭通过其电子穿梭功能促进反硝化作用,促进N2O还原为N2,这一机制被广泛认为是其减缓土壤N2O积累的关键。这种电子穿梭能力主要归因于表面氧化还原活性官能团,如醌和酚羟基。其中,醌/对苯二酚(Q/QH2)基团作为可逆氧化还原对,通过循环接受和给电子,提高电子传递效率。然而,醌官能团调节生物炭的电子穿梭能力,从而增强其促进完全反硝化和减缓N2O的能力的机制尚不清楚。在本研究中,加入氧化还原活性醌基团制备了具有增强电子穿梭能力的生物炭。通过将生物炭掺入土壤,评价了生物炭降低土壤N2O积累的效果。醌增强型生物炭(QBC)显著增强了生物炭的电子穿梭功能,并使土壤N2O积累比对照生物炭减少了82.3%。此外,醌负载的生物炭增加了酸性细菌的相对表达量,并上调了nosZ-II基因的丰度,导致N2O/(N2O + N2)比降低,残留NO3−减少,N2积累量增加,这与更完全的反硝化一致。因此,我们的研究结果表明,生物炭的电子穿梭功能的改善与更完全的反硝化和增强的N2O还原是一致的。这些结果表明,将醌基团加入生物炭中是一种通过增强其电子穿梭功能来减轻N2O积累的可行策略。
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引用次数: 0
Intensive land use enhances soil ammonia-oxidising archaea at a continental scale 集约化土地利用在大陆尺度上促进了土壤氨氧化古菌的生长
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-02-01 Epub Date: 2025-10-29 DOI: 10.1016/j.soilbio.2025.110024
M. Bahram , L. Lehtovirta-Morley , V. Mikryukov , T.R. Sveen , A. Grant , M. Pent , F. Hildebrand , M. Labouyrie , J. Köninger , L. Tedersoo , A. Jones , P. Panagos , A. Orgiazzi
Archaea are an important group of soil organisms that play key roles in carbon and nitrogen cycling, particularly in nitrification (ammonia oxidation) and methanogenesis. However, there are knowledge gaps regarding their importance in ecosystem processes relative to other microbial groups and how they may be impacted by land-use and environmental changes. Here, by carrying out a continental-scale sample collection and utilising archaea-specific primers for metabarcoding and shotgun metagenomics, we aimed to decipher the structure and function of archaeal communities across various land-use types in Europe. Metagenomic data reveal that land-use intensification increases the relative abundance of archaea, whereas bacteria and eukaryotes show no increase. Alongside this, ammonia oxidising archaea (AOA) increase as a proportion of the total metabarcoding reads, from 1 % of archaea in coniferous woodland to >90 % in croplands. Functional gene profiles reveal that land-use intensification shifts archaeal communities from adaptive metabolic pathways in forests to specialised, ammonia-oxidising microbes in fertiliser-enriched cropland soils. Our data suggest that land-use intensification may shift archaeal communities toward greater dependence on external nitrogen inputs, with potential consequences for soil fertility and greenhouse gas emissions.
古细菌是一种重要的土壤生物,在碳和氮循环中起着关键作用,特别是在硝化(氨氧化)和甲烷生成中。然而,相对于其他微生物群,它们在生态系统过程中的重要性以及它们如何受到土地利用和环境变化的影响,在这方面存在知识空白。在这里,通过进行大陆尺度的样本收集,并利用古细菌特异性引物进行元条形码和散弹枪宏基因组学,我们旨在破译欧洲不同土地利用类型的古细菌群落的结构和功能。宏基因组数据显示,土地利用集约化增加了古细菌的相对丰度,而细菌和真核生物没有增加。与此同时,氨氧化古细菌(AOA)在总元条形码读数中的比例也在增加,从针叶林古细菌的1%增加到农田古细菌的90%。功能基因谱显示,土地利用集约化将古生菌群落从森林中的适应性代谢途径转变为富肥农田土壤中专门的氨氧化微生物。我们的数据表明,土地利用集约化可能会使古细菌群落更加依赖外部氮输入,从而对土壤肥力和温室气体排放产生潜在影响。
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引用次数: 0
Nonlinear effect of microbial diversity loss on soil carbon flux 微生物多样性丧失对土壤碳通量的非线性影响
IF 10.3 1区 农林科学 Q1 SOIL SCIENCE Pub Date : 2026-02-01 Epub Date: 2025-11-03 DOI: 10.1016/j.soilbio.2025.110028
Chao Wang , Xiaoyi Huang , Jing Yu , Yue Liu , Fangying Qu , Jian Wang , Xu Wang , Edith Bai
Soil biodiversity is declining globally due to human activities and climate change, but the consequences for soil carbon cycling and carbon dioxide (CO2) emissions remain poorly understood. Here, we investigated the relationship between microbial diversity and soil CO2 flux using a microbial dilution-to-extinction approach across three land-use types (forest, grassland and cropland). We find that soil CO2 fluxes respond nonlinearly to diversity loss, increasing initially at moderate diversity loss, then declining sharply at severe loss. Several key microbial physiological properties, including microbial carbon use efficiency (CUE), nitrogen use efficiency (NUE), and turnover rate, exhibit similar hump-shaped responses to declining diversity. Linear mixed-effects models show that microbial turnover and NUE are positively correlated with soil CO2 fluxes, whereas microbial CUE and the interaction between turnover and NUE are negatively correlated with them. Structural equation modeling approaches further demonstrate that indirect effects mediated by microbial physiological properties, especially turnover rate, exert a stronger influence on soil CO2 fluxes than the direct effects of diversity loss. Together, these findings highlight the complexity of biodiversity-function relationships in soils and emphasize the need to incorporate microbial physiological properties into soil carbon cycle models in the context of global biodiversity change.
由于人类活动和气候变化,全球土壤生物多样性正在下降,但对土壤碳循环和二氧化碳排放的影响仍然知之甚少。本文采用微生物稀释-灭绝方法研究了三种土地利用类型(森林、草地和农田)中微生物多样性与土壤CO2通量的关系。研究发现,土壤CO2通量对多样性损失呈非线性响应,在中度多样性损失时先增加,在严重多样性损失时急剧下降。一些关键的微生物生理特性,包括微生物碳利用效率(CUE)、氮利用效率(NUE)和周转率,对多样性的下降表现出类似的驼峰型响应。线性混合效应模型表明,微生物周转量和NUE与土壤CO2通量呈正相关,而微生物CUE及其交互作用与土壤CO2通量呈负相关。结构方程建模方法进一步表明,微生物生理特性介导的间接效应,尤其是周转率对土壤CO2通量的影响强于多样性丧失的直接效应。总之,这些发现突出了土壤中生物多样性-功能关系的复杂性,并强调了在全球生物多样性变化背景下将微生物生理特性纳入土壤碳循环模型的必要性。
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Soil Biology & Biochemistry
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