Pub Date : 2021-08-01DOI: 10.1016/j.ssnmr.2021.101743
Takeshi Kobayashi , Frédéric A. Perras , Yusuke Nishiyama
Orientationally-dependent interactions such as dipolar coupling, quadrupolar coupling, and chemical shift anisotropy (CSA) contain a wealth of spatial information that can be used to elucidate molecular conformations and dynamics. To determine the sign of the chemical shift tensor anisotropy parameter (δaniso), both the |m| = 1 and |m| = 2 components of the CSA need to be symmetry allowed, while the recoupling of the |m| = 1 term is accompanied with the reintroduction of homonuclear dipolar coupling components. Therefore, previously suggested sequences which solely recouple the |m| = 2 term cannot determine the sign a 1H's δaniso in a densely-coupled network. In this study, we demonstrate the CSA recoupling of strongly dipolar coupled 1H spins using the sequence. This pulse scheme recouples both the |m| = 1 and |m| = 2 CSA terms but the scaling factors for the homonuclear dipolar coupling terms are zeroed. Consequently, the sequence is sensitive to the sign of δaniso but is not influenced by homonuclear dipolar interactions.
{"title":"Determination of the chemical shift tensor anisotropy and asymmetry of strongly dipolar coupled protons under fast MAS","authors":"Takeshi Kobayashi , Frédéric A. Perras , Yusuke Nishiyama","doi":"10.1016/j.ssnmr.2021.101743","DOIUrl":"10.1016/j.ssnmr.2021.101743","url":null,"abstract":"<div><p><span><span><span>Orientationally-dependent interactions such as dipolar coupling, quadrupolar coupling, and </span>chemical shift anisotropy (CSA) contain a wealth of spatial information that can be used to elucidate </span>molecular conformations and dynamics. To determine the sign of the chemical shift tensor anisotropy parameter (</span><em>δ</em><sub>aniso</sub>), both the |<em>m</em>| = 1 and |<em>m</em>| = 2 components of the CSA need to be symmetry allowed, while the recoupling of the |<em>m</em>| = 1 term is accompanied with the reintroduction of homonuclear dipolar coupling components. Therefore, previously suggested sequences which solely recouple the |<em>m</em>| = 2 term cannot determine the sign a <sup>1</sup>H's <em>δ</em><sub>aniso</sub> in a densely-coupled network. In this study, we demonstrate the CSA recoupling of strongly dipolar coupled <sup>1</sup>H spins using the <span><math><mrow><mi>C</mi><msubsup><mi>n</mi><mi>n</mi><mn>1</mn></msubsup><mrow><mo>(</mo><mrow><msub><mn>90</mn><mn>0</mn></msub><msub><mn>360</mn><mn>180</mn></msub><msub><mn>540</mn><mn>0</mn></msub><msub><mn>360</mn><mn>180</mn></msub><msub><mn>90</mn><mn>0</mn></msub></mrow><mo>)</mo></mrow></mrow></math></span> sequence. This pulse scheme recouples both the |<em>m</em>| = 1 and |<em>m</em>| = 2 CSA terms but the scaling factors for the homonuclear dipolar coupling terms are zeroed. Consequently, the sequence is sensitive to the sign of <em>δ</em><sub>aniso</sub><span> but is not influenced by homonuclear dipolar interactions.</span></p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"114 ","pages":"Article 101743"},"PeriodicalIF":3.2,"publicationDate":"2021-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.ssnmr.2021.101743","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39253050","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2021-08-01DOI: 10.1016/j.ssnmr.2021.101734
Yusuke Nishiyama , Vipin Agarwal , Rongchun Zhang
Solid-state NMR spectroscopy has played a significant role in elucidating the structure and dynamics of materials and biological solids at a molecular level for decades. In particular, the 1H double-quantum/single-quantum (DQ/SQ) chemical shift correlation experiment is widely used for probing the proximity of protons, rendering it a powerful tool for elucidating the hydrogen-bonding interactions and molecular packing of various complex molecular systems. Two factors, namely, the DQ filtering efficiency and t1-noise, dictate the quality of the 2D 1H DQ/SQ spectra. Experimentally different recoupling sequences show varied DQ filtering efficiencies and t1-noise. Herein, after a systematic search of symmetry-based DQ recoupling sequences, we report that the symmetry-based γ-encoded sequences show superior performance to other DQ recoupling sequences, which not only have a higher DQ recoupling efficiency but can also significantly reduce t1-noise. The origin of t1-noise is further discussed in detail via extensive numerical simulations. We envisage that such γ-encoded sequences are superior candidates for DQ recoupling in proton-based solid-state NMR spectroscopy due to its capability of efficiently exciting DQ coherences and suppressing t1-noise.
{"title":"Efficient symmetry-based γ-encoded DQ recoupling sequences for suppression of t1-noise in solid-state NMR spectroscopy at fast MAS","authors":"Yusuke Nishiyama , Vipin Agarwal , Rongchun Zhang","doi":"10.1016/j.ssnmr.2021.101734","DOIUrl":"https://doi.org/10.1016/j.ssnmr.2021.101734","url":null,"abstract":"<div><p><span>Solid-state NMR spectroscopy has played a significant role in elucidating the structure and dynamics of materials and biological solids at a molecular level for decades. In particular, the </span><sup>1</sup>H double-quantum/single-quantum (DQ/SQ) chemical shift correlation experiment is widely used for probing the proximity of protons, rendering it a powerful tool for elucidating the hydrogen-bonding interactions and molecular packing of various complex molecular systems. Two factors, namely, the DQ filtering efficiency and <em>t</em><sub>1</sub>-noise, dictate the quality of the 2D <sup>1</sup>H DQ/SQ spectra. Experimentally different recoupling sequences show varied DQ filtering efficiencies and <em>t</em><sub>1</sub>-noise. Herein, after a systematic search of symmetry-based DQ recoupling sequences, we report that the symmetry-based γ-encoded <span><math><mrow><mi>R</mi><msubsup><mi>N</mi><mi>n</mi><mi>ν</mi></msubsup></mrow></math></span> sequences show superior performance to other DQ recoupling sequences, which not only have a higher DQ recoupling efficiency but can also significantly reduce <em>t</em><sub>1</sub>-noise. The origin of <em>t</em><sub>1</sub>-noise is further discussed in detail via extensive numerical simulations. We envisage that such γ-encoded <span><math><mrow><mi>R</mi><msubsup><mi>N</mi><mi>n</mi><mi>ν</mi></msubsup></mrow></math></span> sequences are superior candidates for DQ recoupling in proton-based solid-state NMR spectroscopy due to its capability of efficiently exciting DQ coherences and suppressing <em>t</em><sub>1</sub>-noise.</p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"114 ","pages":"Article 101734"},"PeriodicalIF":3.2,"publicationDate":"2021-08-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.ssnmr.2021.101734","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"72249281","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2021-06-01DOI: 10.1016/j.ssnmr.2021.101731
Magali Gauthier, Minh Hoang Nguyen , Lucie Blondeau, Eddy Foy, Alan Wong
Applying operando investigations is becoming essential for acquiring fundamental insights into the reaction mechanisms and phenomena at stake in batteries currently under development. The capability of a real-time characterization of the charge/discharge electrochemical pathways and the reactivity of the electrolyte is critical to decipher the underlying chemistries and improve the battery performance. Yet, adapting operando techniques for new chemistries such as metal-oxygen (i.e. metal-air) batteries introduces challenges in the cell design due notably to the requirements of an oxygen gas supply at the cathode. Herein a simple operando cell is presented with a two-compartment cylindrical cell design for NMR spectroscopy. The design is discussed and evaluated. Operando7Li static NMR characterization on a Li–O2 battery was performed as a proof-of-concept. The productions of Li2O2, mossy Li/Li dendrites and other irreversible parasitic lithium compounds were captured in the charge/discharge processes, demonstrating the capability of tracking the evolution of the anodic and cathodic chemistry in metal-oxygen batteries.
{"title":"Operando NMR characterization of a metal-air battery using a double-compartment cell design","authors":"Magali Gauthier, Minh Hoang Nguyen , Lucie Blondeau, Eddy Foy, Alan Wong","doi":"10.1016/j.ssnmr.2021.101731","DOIUrl":"10.1016/j.ssnmr.2021.101731","url":null,"abstract":"<div><p>Applying <em>operando</em><span><span> investigations is becoming essential for acquiring fundamental insights into the reaction mechanisms and phenomena at stake in batteries currently under development. The capability of a real-time characterization of the charge/discharge electrochemical pathways and the reactivity of the electrolyte is critical to decipher the underlying </span>chemistries and improve the battery performance. Yet, adapting </span><em>operando</em> techniques for new chemistries such as metal-oxygen (<em>i.e.</em> metal-air) batteries introduces challenges in the cell design due notably to the requirements of an oxygen gas supply at the cathode. Herein a simple <em>operando</em><span> cell is presented with a two-compartment cylindrical cell design for NMR spectroscopy. The design is discussed and evaluated. </span><em>Operando</em> <sup>7</sup>Li static NMR characterization on a Li–O<sub>2</sub> battery was performed as a proof-of-concept. The productions of Li<sub>2</sub>O<sub>2</sub><span>, mossy Li/Li dendrites and other irreversible parasitic lithium compounds were captured in the charge/discharge processes, demonstrating the capability of tracking the evolution of the anodic and cathodic chemistry in metal-oxygen batteries.</span></p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"113 ","pages":"Article 101731"},"PeriodicalIF":3.2,"publicationDate":"2021-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.ssnmr.2021.101731","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"25564712","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2021-06-01DOI: 10.1016/j.ssnmr.2021.101732
Eugeny Kryukov, Miroslaw Owczarkowski, David Phillipps, Angel Joaquin Perez Linde, Stephen Burgess, Jeremy Good
Despite the obvious advantages of cryogen-free magnets for NMR such as independence of liquid helium supply and the possibility to use the same magnet at different fields, the practical application of those magnets remains limited because of temporal magnetic field distortions associated with cryogen-free cold head operation. A new experimental method for the simple and reliable detection of the temporal field distortions is described in this paper. The accuracy of the magnetic field measurements by this method is two orders of magnitude higher than by conventional MetroLab Tesla meter. This has enabled us to make improvements in the design of cryogen-free magnets by reducing the amplitude of such field distortions down to sub ppb level. This then results in cryogen-free magnets that are suitable for MRI and MAS NMR applications.
{"title":"A new method to measure the temporal magnetic field instabilities in cryogen-free magnets for magnetic resonance","authors":"Eugeny Kryukov, Miroslaw Owczarkowski, David Phillipps, Angel Joaquin Perez Linde, Stephen Burgess, Jeremy Good","doi":"10.1016/j.ssnmr.2021.101732","DOIUrl":"10.1016/j.ssnmr.2021.101732","url":null,"abstract":"<div><p>Despite the obvious advantages of cryogen-free magnets for NMR such as independence of liquid helium supply and the possibility to use the same magnet at different fields, the practical application of those magnets remains limited because of temporal magnetic field distortions associated with cryogen-free cold head operation. A new experimental method for the simple and reliable detection of the temporal field distortions is described in this paper. The accuracy of the magnetic field measurements by this method is two orders of magnitude higher than by conventional MetroLab Tesla meter. This has enabled us to make improvements in the design of cryogen-free magnets by reducing the amplitude of such field distortions down to sub ppb level. This then results in cryogen-free magnets that are suitable for MRI and MAS NMR applications.</p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"113 ","pages":"Article 101732"},"PeriodicalIF":3.2,"publicationDate":"2021-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.ssnmr.2021.101732","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38892003","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2021-06-01DOI: 10.1016/j.ssnmr.2021.101728
Rubin Dasgupta, Karthick B.S.S. Gupta, Derek Elam , Marcellus Ubbink, Huub J.M. de Groot
We demonstrate the efficacy of the REDOR-type sequences in determining dipolar coupling strength in a paramagnetic environment. Utilizing paramagnetic effects of enhanced relaxation rates and rapid electronic fluctuations in Cu(II)-(DL-Ala)2.H2O, the dipolar coupling for the methyl C–H that is 4.20 Å (methyl carbon) away from the Cu2+ ion, was estimated to be 8.8 ± 0.6 kHz. This coupling is scaled by a factor of ~0.3 in comparison to the rigid limit value of ~32 kHz, in line with partial averaging of the dipolar interaction by rotational motion of the methyl group. Limited variation in the scaling factor of the dipolar coupling strength at different temperatures is observed. The C–H internuclear distance derived from the size of the dipolar coupling is similar to that observed in the crystal structure. The errors in the dipolar coupling strength observed in the REDOR-type experiments are similar to those reported for diamagnetic systems. Increase in resolution due to the Fermi contact shifts, coupled with MAS frequencies of 30–35 kHz allowed to estimate the hyperfine coupling strengths for protons and carbons from the temperature dependence of the chemical shift and obtain a high resolution 1H–1H spin diffusion spectrum. This study shows the utility of REDOR-type sequences in obtaining reliable structural and dynamical information from a paramagnetic complex. We believe that this can help in studying the active site of paramagnetic metalloproteins at high resolution.
{"title":"Dipolar dephasing for structure determination in a paramagnetic environment","authors":"Rubin Dasgupta, Karthick B.S.S. Gupta, Derek Elam , Marcellus Ubbink, Huub J.M. de Groot","doi":"10.1016/j.ssnmr.2021.101728","DOIUrl":"10.1016/j.ssnmr.2021.101728","url":null,"abstract":"<div><p>We demonstrate the efficacy of the REDOR-type sequences in determining dipolar coupling strength in a paramagnetic environment. Utilizing paramagnetic effects of enhanced relaxation rates and rapid electronic fluctuations in Cu(II)-(DL-Ala)<sub>2</sub>.H<sub>2</sub>O, the dipolar coupling for the methyl C–H that is 4.20 Å (methyl carbon) away from the Cu<sup>2+</sup> ion, was estimated to be 8.8 ± 0.6 kHz. This coupling is scaled by a factor of ~0.3 in comparison to the rigid limit value of ~32 kHz, in line with partial averaging of the dipolar interaction by rotational motion of the methyl group. Limited variation in the scaling factor of the dipolar coupling strength at different temperatures is observed. The C–H internuclear distance derived from the size of the dipolar coupling is similar to that observed in the crystal structure. The errors in the dipolar coupling strength observed in the REDOR-type experiments are similar to those reported for diamagnetic systems. Increase in resolution due to the Fermi contact shifts, coupled with MAS frequencies of 30–35 kHz allowed to estimate the hyperfine coupling strengths for protons and carbons from the temperature dependence of the chemical shift and obtain a high resolution <sup>1</sup>H–<sup>1</sup>H spin diffusion spectrum. This study shows the utility of REDOR-type sequences in obtaining reliable structural and dynamical information from a paramagnetic complex. We believe that this can help in studying the active site of paramagnetic metalloproteins at high resolution.</p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"113 ","pages":"Article 101728"},"PeriodicalIF":3.2,"publicationDate":"2021-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.ssnmr.2021.101728","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"25498679","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2021-04-01DOI: 10.1016/j.ssnmr.2020.101709
Takahiro Iijima , Shinobu Ohki , Masataka Tansho
Separated pure-quadrupole (PQ) and -shift (PS) spectra of 2H nuclear magnetic resonance (NMR) of paramagnetic solids are obtained and correlated by simple pulse sequences that can acquire the full magnetization under ideal conditions. Two-dimensional NMR signals obtained using an asymmetric π-pulse-inserted quadrupole-echo (APIQE) sequence yielded separated spectra through the skew operation of an affine transform (AT) before a Fourier transform. Modified APIQE sequences that acquire whole echo signals were fabricated, and separated PQ and PS spectra were obtained by applying a combination of AT, such as rotation and skew operations, to the signal data. These methods were demonstrated for diamagnetic Zn(CD3CO2)2⋅2H2O and paramagnetic Nd(CD3CO2)3⋅1.5H2O. Further, the dynamics of the D2O molecule and [Co(D2O)6]2+ ion in paramagnetic CoSiF6⋅6D2O was analyzed based on the temperature dependence of the separated spectra.
{"title":"Separated quadrupole and shift interactions of 2H NMR spectra in paramagnetic solids by asymmetric pulse sequences","authors":"Takahiro Iijima , Shinobu Ohki , Masataka Tansho","doi":"10.1016/j.ssnmr.2020.101709","DOIUrl":"10.1016/j.ssnmr.2020.101709","url":null,"abstract":"<div><p>Separated pure-quadrupole (PQ) and -shift (PS) spectra of <sup>2</sup><span>H nuclear magnetic resonance (NMR) of paramagnetic solids are obtained and correlated by simple pulse sequences that can acquire the full magnetization under ideal conditions. Two-dimensional NMR signals obtained using an asymmetric </span><em>π</em><span>-pulse-inserted quadrupole-echo (APIQE) sequence yielded separated spectra through the skew operation of an affine transform (AT) before a Fourier transform<span>. Modified APIQE sequences that acquire whole echo signals were fabricated, and separated PQ and PS spectra were obtained by applying a combination of AT, such as rotation and skew operations, to the signal data. These methods were demonstrated for diamagnetic Zn(CD</span></span><sub>3</sub>CO<sub>2</sub>)<sub>2</sub>⋅2H<sub>2</sub>O and paramagnetic Nd(CD<sub>3</sub>CO<sub>2</sub>)<sub>3</sub>⋅1.5H<sub>2</sub>O. Further, the dynamics of the D<sub>2</sub>O molecule and [Co(D<sub>2</sub>O)<sub>6</sub>]<sup>2+</sup><span> ion in paramagnetic CoSiF</span><sub>6</sub>⋅6D<sub>2</sub>O was analyzed based on the temperature dependence of the separated spectra.</p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"112 ","pages":"Article 101709"},"PeriodicalIF":3.2,"publicationDate":"2021-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.ssnmr.2020.101709","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38864017","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2021-04-01DOI: 10.1016/j.ssnmr.2020.101711
Yi Ji , Lixin Liang , Xinhe Bao , Guangjin Hou
With the recent advances in NMR hardware and probe design technology, magic-angle spinning (MAS) rates over 100 kHz are accessible now, even on commercial solid NMR probes. Under such fast MAS conditions, excellent spectral resolution has been achieved by efficient suppression of anisotropic interactions, which also opens an avenue to the proton-detected NMR experiments in solids. Numerous methods have been developed to take full advantage of fast MAS during the last decades. Among them, dipolar recoupling techniques under fast MAS play vital roles in the determination of the molecular structure and dynamics, and are also key elements in multi-dimensional correlation NMR experiments. Herein, we review the dipolar recoupling techniques, especially those developed in the past two decades for fast-to-ultrafast MAS conditions. A major focus for our discussion is the ratio of RF field strength (in frequency) to MAS frequency, /, in different pulse sequences, which determines whether these dipolar recoupling techniques are suitable for NMR experiments under fast MAS conditions. Systematic comparisons are made among both heteronuclear and homonuclear dipolar recoupling schemes. In addition, the schemes developed specially for proton-detection NMR experiments under ultrafast MAS conditions are highlighted as well.
{"title":"Recent progress in dipolar recoupling techniques under fast MAS in solid-state NMR spectroscopy","authors":"Yi Ji , Lixin Liang , Xinhe Bao , Guangjin Hou","doi":"10.1016/j.ssnmr.2020.101711","DOIUrl":"10.1016/j.ssnmr.2020.101711","url":null,"abstract":"<div><p><span><span>With the recent advances in NMR hardware and probe design technology, magic-angle spinning (MAS) rates over 100 kHz are accessible now, even on commercial solid NMR probes. Under such fast MAS conditions, excellent spectral resolution has been achieved by efficient suppression of anisotropic interactions, which also opens an avenue to the proton-detected NMR experiments in solids. Numerous methods have been developed to take full advantage of fast MAS during the last decades. Among them, dipolar recoupling<span> techniques under fast MAS play vital roles in the determination of the molecular structure and dynamics, and are also key elements in multi-dimensional correlation NMR experiments. Herein, we review the dipolar recoupling techniques, especially those developed in the past two decades for fast-to-ultrafast MAS conditions. A major focus for our discussion is the ratio of RF field </span></span>strength (in frequency) to MAS frequency, </span><span><math><mrow><msub><mi>ν</mi><mn>1</mn></msub></mrow></math></span>/<span><math><mrow><msub><mi>ν</mi><mi>r</mi></msub></mrow></math></span>, in different pulse sequences, which determines whether these dipolar recoupling techniques are suitable for NMR experiments under fast MAS conditions. Systematic comparisons are made among both heteronuclear and homonuclear dipolar recoupling schemes. In addition, the schemes developed specially for proton-detection NMR experiments under ultrafast MAS conditions are highlighted as well.</p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"112 ","pages":"Article 101711"},"PeriodicalIF":3.2,"publicationDate":"2021-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.ssnmr.2020.101711","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38872026","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2021-02-01DOI: 10.1016/j.ssnmr.2020.101710
Liliya Vugmeyster
Slow timescale dynamics in proteins are essential for a variety of biological functions spanning ligand binding, enzymatic catalysis, protein folding and misfolding regulations, as well as protein–protein and protein–nucleic acid interactions. In this review, we focus on the experimental and theoretical developments of 2H static NMR methods applicable for studies of microsecond to millisecond motional modes in proteins, particularly rotating frame relaxation dispersion (R1ρ), quadrupolar Carr–Purcell–Meiboom–Gill (QCPMG) relaxation dispersion, and quadrupolar chemical exchange saturation transfer NMR experiments (Q-CEST). With applications chosen from amyloid-β fibrils, we show the complementarity of these approaches for elucidating the complexities of conformational ensembles in disordered domains in the non-crystalline solid state, with the employment of selective deuterium labels. Combined with recent advances in relaxation dispersion backbone measurements for 15N/13C/1H nuclei, these techniques provide powerful tools for studies of biologically relevant timescale dynamics in disordered domains in the solid state.
{"title":"Recent developments in deuterium solid-state NMR for the detection of slow motions in proteins","authors":"Liliya Vugmeyster","doi":"10.1016/j.ssnmr.2020.101710","DOIUrl":"10.1016/j.ssnmr.2020.101710","url":null,"abstract":"<div><p><span><span>Slow timescale dynamics in proteins are essential for a variety of biological functions spanning ligand binding, enzymatic catalysis, </span>protein folding and misfolding regulations, as well as protein–protein and protein–nucleic acid interactions. In this review, we focus on the experimental and theoretical developments of </span><sup>2</sup>H static NMR methods applicable for studies of microsecond to millisecond motional modes in proteins, particularly rotating frame relaxation dispersion (<em>R</em><sub>1ρ</sub><span>), quadrupolar Carr–Purcell–Meiboom–Gill (QCPMG) relaxation dispersion, and quadrupolar chemical exchange saturation transfer<span> NMR experiments (Q-CEST). With applications chosen from amyloid-β fibrils, we show the complementarity of these approaches for elucidating the complexities of conformational ensembles in disordered domains in the non-crystalline solid state, with the employment of selective deuterium labels. Combined with recent advances in relaxation dispersion backbone measurements for </span></span><sup>15</sup>N/<sup>13</sup>C/<sup>1</sup>H nuclei, these techniques provide powerful tools for studies of biologically relevant timescale dynamics in disordered domains in the solid state.</p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"111 ","pages":"Article 101710"},"PeriodicalIF":3.2,"publicationDate":"2021-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.ssnmr.2020.101710","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38826956","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2021-02-01DOI: 10.1016/j.ssnmr.2020.101701
Joel Lapin, Emmanuel O. Awosanya, Richard J.A. Esteves, Alexander A. Nevzorov
The benefits of triple-resonance experiments for structure determination of macroscopically oriented membrane proteins by solid-state NMR are discussed. While double-resonance 1H/15N experiments are effective for structure elucidation of alpha-helical domains, extension of the method of oriented samples to more complex topologies and assessing side-chain conformations necessitates further development of triple-resonance (1H/13C/15N) NMR pulse sequences. Incorporating additional spectroscopic dimensions involving 13C spin-bearing nuclei, however, introduces essential complications arising from the wide frequency range of the 1H-13C dipolar couplings and 13C CSA (>20 kHz), and the presence of the 13C-13C homonuclear dipole-dipole interactions. The recently reported ROULETTE–CAHA pulse sequence, in combination with the selective z-filtering, can be used to evolve the structurally informative 1H-13C dipolar coupling arising from the aliphatic carbons while suppressing the signals from the carbonyl and methyl regions. Proton-mediated magnetization transfer under mismatched Hartman-Hahn conditions (MMHH) can be used to correlate 13C and 15N nuclei in such triple-resonance experiments for the subsequent 15N detection. The recently developed pulse sequences are illustrated for n-acetyl Leucine (NAL) single crystal and doubly labeled Pf1 coat protein reconstituted in magnetically aligned bicelles. An interesting observation is that in the case of 15N-labeled NAL measured at 13C natural abundance, the triple (1H/13C/15N) MMHH scheme predominantly gives rise to long-range intermolecular magnetization transfers from 13C to 15N spins; whereas direct Hartmann-Hahn 13C/15N transfer is entirely intramolecular. The presented developments advance NMR of oriented samples for structure determination of membrane proteins and liquid crystals.
{"title":"1H/13C/15N triple-resonance experiments for structure determinaton of membrane proteins by oriented-sample NMR","authors":"Joel Lapin, Emmanuel O. Awosanya, Richard J.A. Esteves, Alexander A. Nevzorov","doi":"10.1016/j.ssnmr.2020.101701","DOIUrl":"10.1016/j.ssnmr.2020.101701","url":null,"abstract":"<div><p>The benefits of triple-resonance experiments for structure determination of macroscopically oriented membrane proteins by solid-state NMR are discussed. While double-resonance <sup>1</sup>H/<sup>15</sup><span>N experiments are effective for structure elucidation of alpha-helical domains, extension of the method of oriented samples to more complex topologies and assessing side-chain conformations necessitates further development of triple-resonance (</span><sup>1</sup>H/<sup>13</sup>C/<sup>15</sup>N) NMR pulse sequences. Incorporating additional spectroscopic dimensions involving <sup>13</sup>C spin-bearing nuclei, however, introduces essential complications arising from the wide frequency range of the <sup>1</sup>H-<sup>13</sup><span>C dipolar couplings and </span><sup>13</sup><span>C CSA (>20 kHz), and the presence of the </span><sup>13</sup>C-<sup>13</sup>C homonuclear dipole-dipole interactions. The recently reported ROULETTE–CAHA pulse sequence, in combination with the selective z-filtering, can be used to evolve the structurally informative <sup>1</sup>H-<sup>13</sup><span>C dipolar coupling arising from the aliphatic carbons while suppressing the signals from the carbonyl and methyl regions. Proton-mediated magnetization transfer under mismatched Hartman-Hahn conditions (MMHH) can be used to correlate </span><sup>13</sup>C and <sup>15</sup>N nuclei in such triple-resonance experiments for the subsequent <sup>15</sup><span>N detection. The recently developed pulse sequences are illustrated for n-acetyl Leucine<span> (NAL) single crystal and doubly labeled Pf1 coat protein reconstituted in magnetically aligned bicelles. An interesting observation is that in the case of </span></span><sup>15</sup>N-labeled NAL measured at <sup>13</sup>C natural abundance, the triple (<sup>1</sup>H/<sup>13</sup>C/<sup>15</sup>N) MMHH scheme predominantly gives rise to long-range intermolecular magnetization transfers from <sup>13</sup>C to <sup>15</sup>N spins; whereas direct Hartmann-Hahn <sup>13</sup>C/<sup>15</sup>N transfer is entirely intramolecular. The presented developments advance NMR of oriented samples for structure determination of membrane proteins and liquid crystals.</p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"111 ","pages":"Article 101701"},"PeriodicalIF":3.2,"publicationDate":"2021-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.ssnmr.2020.101701","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38661792","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2021-02-01DOI: 10.1016/j.ssnmr.2020.101712
Frédéric A. Perras, Alexander L. Paterson, Takeshi Kobayashi
γ-encoded recoupling sequences are known to produce strong amplitude modulations that lead to sharp doublets when Fourier transformed. These doublets depend very little on the recoupled tensor asymmetry and thus enable for the straightforward determination of dynamic order parameters. It can, however, be difficult to measure small anisotropies, or small order parameters, using such sequences; the resonances from the doublet may overlap with each other, or with the zero-frequency glitch. This limitation has prevented the widespread use of 1H chemical shift anisotropy (CSA) for the measurement of dynamics, particularly for CH protons which typically have CSAs of only a few ppm when immobile. Here, we introduce a simple modification to the traditional 1H CSA and proton-detected local field pulse sequences that enables the acquisition of a hypercomplex dataset and the removal of the uncorrelated magnetization that results in the zero-frequency glitch. These new sequences then yield a frequency shift in the indirect dimension, rather than a splitting, which is easily identifiable even in cases of weak interactions.
{"title":"Phase-sensitive γ-encoded recoupling of heteronuclear dipolar interactions and 1H chemical shift anisotropy","authors":"Frédéric A. Perras, Alexander L. Paterson, Takeshi Kobayashi","doi":"10.1016/j.ssnmr.2020.101712","DOIUrl":"10.1016/j.ssnmr.2020.101712","url":null,"abstract":"<div><p>γ-encoded recoupling sequences are known to produce strong amplitude modulations that lead to sharp doublets when Fourier transformed. These doublets depend very little on the recoupled tensor asymmetry and thus enable for the straightforward determination of dynamic order parameters. It can, however, be difficult to measure small anisotropies, or small order parameters, using such sequences; the resonances from the doublet may overlap with each other, or with the zero-frequency glitch. This limitation has prevented the widespread use of <sup>1</sup><span>H chemical shift anisotropy (CSA) for the measurement of dynamics, particularly for CH protons which typically have CSAs of only a few ppm when immobile. Here, we introduce a simple modification to the traditional </span><sup>1</sup>H CSA and proton-detected local field pulse sequences that enables the acquisition of a hypercomplex dataset and the removal of the uncorrelated magnetization that results in the zero-frequency glitch. These new sequences then yield a frequency shift in the indirect dimension, rather than a splitting, which is easily identifiable even in cases of weak interactions.</p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"111 ","pages":"Article 101712"},"PeriodicalIF":3.2,"publicationDate":"2021-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/j.ssnmr.2020.101712","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38826957","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}