首页 > 最新文献

Solid state nuclear magnetic resonance最新文献

英文 中文
MAS-DNP enables NMR studies of insect wings MAS-DNP使昆虫翅膀的核磁共振研究
IF 3.2 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2022-12-01 DOI: 10.1016/j.ssnmr.2022.101838
Frédéric Mentink-Vigier , Samuel Eddy , Terry Gullion

NMR is a valuable tool for studying insects. Solid-state NMR has been used to obtain the chemical composition and gain insight into the sclerotization process of exoskeletons. There is typically little difficulty in obtaining sufficient sample quantity for exoskeletons. However, obtaining enough sample of other insect components for solid-state NMR experiments can be problematic while isotopically enriching them is near impossible. This is especially the case for insect wing membranes which is of interest to us. Issues with obtaining sufficient sample are the thickness of wing membranes is on the order of microns, each membrane region is surrounded by veins and occupies a small area, and the membranes are separated from the wing by physical dissection. Accordingly, NMR signal enhancement methods are needed. MAS-DNP has a track record of providing significant signal enhancements for a wide variety of materials. Here we demonstrate that MAS-DNP is useful for providing high quality one-dimensional and two-dimensional solid-state NMR spectra on cicada wing membrane at natural isotopic abundance.

核磁共振是研究昆虫的重要工具。固态核磁共振已被用于获得化学成分和深入了解外骨骼的硬化过程。一般来说,获得足够数量的外骨骼样本没有什么困难。然而,为固体核磁共振实验获得足够的其他昆虫成分样本可能会有问题,而同位素富集它们几乎是不可能的。这对我们感兴趣的昆虫翅膀膜来说尤其如此。获得足够样品的问题是,机翼膜的厚度在微米量级,每个膜区域被静脉包围并占据很小的面积,并且膜通过物理解剖与机翼分离。因此,需要核磁共振信号增强方法。MAS-DNP具有为各种材料提供显著信号增强的记录。本研究表明,MAS-DNP可用于在自然同位素丰度下提供高质量的蝉翅膜一维和二维固体核磁共振光谱。
{"title":"MAS-DNP enables NMR studies of insect wings","authors":"Frédéric Mentink-Vigier ,&nbsp;Samuel Eddy ,&nbsp;Terry Gullion","doi":"10.1016/j.ssnmr.2022.101838","DOIUrl":"10.1016/j.ssnmr.2022.101838","url":null,"abstract":"<div><p><span>NMR is a valuable tool for studying insects. Solid-state NMR has been used to obtain the chemical composition and gain insight into the sclerotization process of exoskeletons. There is typically little difficulty in obtaining sufficient sample quantity for exoskeletons. However, obtaining enough sample of other insect components for solid-state NMR experiments can be problematic while isotopically enriching them is near impossible. This is especially the case for insect wing membranes which is of interest to us. Issues with obtaining sufficient sample are the thickness of wing membranes is on the order of microns, each membrane region is surrounded by veins and occupies a small area, and the membranes are separated from the wing by physical dissection. Accordingly, </span>NMR signal enhancement methods are needed. MAS-DNP has a track record of providing significant signal enhancements for a wide variety of materials. Here we demonstrate that MAS-DNP is useful for providing high quality one-dimensional and two-dimensional solid-state NMR spectra on cicada wing membrane at natural isotopic abundance.</p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"122 ","pages":"Article 101838"},"PeriodicalIF":3.2,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10398228","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
New salts of teriflunomide (TFM) – Single crystal X-ray and solid state NMR investigation 新型特氟米特盐(TFM) -单晶x射线和固态核磁共振研究
IF 3.2 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2022-12-01 DOI: 10.1016/j.ssnmr.2022.101820
Tomasz Pawlak , Piotr Paluch , Rafał Dolot , Grzegorz Bujacz , Marek J. Potrzebowski

New salts of teriflunomide TFM (drug approved for Multiple Sclerosis treatment) with inorganic counterions: lithium (TFM_Li), sodium (TFM_Na), potassium (TFM_K), rubidium (TFM_Rb), caesium (TFM_Cs) and ammonium (TFM_NH4) were prepared and investigated employing solid state NMR Spectroscopy, Powder X-ray Diffraction PXRD and Single Crystal X-ray Diffraction (SC XRD). Crystal and molecular structures of three salts: TFM_Na (CCDC: 2173257), TFM_Cs (CCDC: 2165288) and TFM_NH4 (CCDC: 2165281) were determined and deposited. Compared to the native TFM, for all crystalline salt structures, a conformational change of the teriflunomide molecule involving about 180-degree rotation of the end group, forming an intramolecular hydrogen bond N–H⋯O is observed. By applying a complementary multi-technique approach, employing 1D and 2D solid state MAS NMR techniques, single and powder X-ray diffraction measurements, as well as the DFT-based GIPAW calculations of NMR chemical shifts for TFM_Na and TFM_Cs allowed to propose structural features of TFM_Li for which it was not possible to obtain adequate material for single crystal X-Ray measurement.

采用固体核磁共振波谱、粉末x射线衍射(PXRD)和单晶x射线衍射(SC XRD)对特立氟米特TFM(批准用于多发性硬化症治疗的药物)的无机反离子锂(TFM_Li)、钠(TFM_Na)、钾(TFM_K)、铷(TFM_Rb)、铯(TFM_Cs)和铵(TFM_NH4)盐进行了研究。测定并沉积了TFM_Na (CCDC: 2173257)、TFM_Cs (CCDC: 2165288)和TFM_NH4 (CCDC: 2165281)三种盐的晶体结构和分子结构。与天然TFM相比,对于所有结晶盐结构,观察到teri氟米特分子的构象变化涉及端基约180度旋转,形成分子内氢键N-H⋯O。通过采用互补的多技术方法,采用1D和2D固态MAS核磁共振技术,单晶和粉末x射线衍射测量,以及基于dft的TFM_Na和TFM_Cs核磁共振化学位移的GIPAW计算,可以提出TFM_Li的结构特征,而单晶x射线测量无法获得足够的材料。
{"title":"New salts of teriflunomide (TFM) – Single crystal X-ray and solid state NMR investigation","authors":"Tomasz Pawlak ,&nbsp;Piotr Paluch ,&nbsp;Rafał Dolot ,&nbsp;Grzegorz Bujacz ,&nbsp;Marek J. Potrzebowski","doi":"10.1016/j.ssnmr.2022.101820","DOIUrl":"10.1016/j.ssnmr.2022.101820","url":null,"abstract":"<div><p>New salts of teriflunomide <strong>TFM</strong> (drug approved for Multiple Sclerosis treatment) with inorganic counterions: lithium (<strong>TFM_Li)</strong>, sodium (<strong>TFM_Na)</strong>, potassium (<strong>TFM_K)</strong>, rubidium (<strong>TFM_Rb)</strong>, caesium (<strong>TFM_Cs)</strong> and ammonium (<strong>TFM_NH</strong><sub><strong>4</strong></sub><strong>)</strong> were prepared and investigated employing solid state NMR Spectroscopy, Powder X-ray Diffraction PXRD and Single Crystal X-ray Diffraction (SC XRD). Crystal and molecular structures of three salts: <strong>TFM_Na</strong> (CCDC: 2173257), <strong>TFM_Cs</strong> (CCDC: 2165288) and <strong>TFM_NH</strong><sub><strong>4</strong></sub> (CCDC: 2165281) were determined and deposited. Compared to the native <strong>TFM</strong>, for all crystalline salt structures, a conformational change of the teriflunomide molecule involving about 180-degree rotation of the end group, forming an intramolecular hydrogen bond N–H⋯O is observed. By applying a complementary multi-technique approach, employing 1D and 2D solid state MAS NMR techniques, single and powder X-ray diffraction measurements, as well as the DFT-based GIPAW calculations of NMR chemical shifts for <strong>TFM_Na</strong> and <strong>TFM_Cs</strong> allowed to propose structural features of <strong>TFM_Li</strong> for which it was not possible to obtain adequate material for single crystal X-Ray measurement.</p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"122 ","pages":"Article 101820"},"PeriodicalIF":3.2,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0926204022000492/pdfft?md5=b5f36b38b63761d08c402a715bb94fef&pid=1-s2.0-S0926204022000492-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10685599","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Interaction frames in solid-state NMR: A case study for chemical-shift-selective irradiation schemes 固态核磁共振中的相互作用框架:化学偏移选择性辐照方案的案例研究
IF 3.2 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2022-12-01 DOI: 10.1016/j.ssnmr.2022.101834
Matías Chávez, Matthias Ernst

Interaction frames play an important role in describing and understanding experimental schemes in magnetic resonance. They are often used to eliminate dominating parts of the spin Hamiltonian, e.g., the Zeeman Hamiltonian in the usual (Zeeman) rotating frame, or the radio-frequency-field (rf) Hamiltonian to describe the efficiency of decoupling or recoupling sequences. Going into an interaction frame can also make parts of a time-dependent Hamiltonian time independent like the rf-field Hamiltonian in the usual (Zeeman) rotating frame. Eliminating the dominant term often allows a better understanding of the details of the spin dynamics. Going into an interaction frame can also reduces the energy-level splitting in the Hamiltonian leading to a faster convergence of perturbation expansions, average Hamiltonian, or Floquet theory. Often, there is no obvious choice of the interaction frame to use but some can be more convenient than others. Using the example of frequency-selective dipolar recoupling, we discuss the differences, advantages, and disadvantages of different choices of interaction frames. They always include the complete radio-frequency Hamiltonian but can also contain the chemical shifts of the spins and may or may not contain the effective fields over one cycle of the pulse sequence.

相互作用框架在描述和理解磁共振实验方案中起着重要作用。它们通常用于消除自旋哈密顿量的主要部分,例如,通常(塞曼)旋转框架中的塞曼哈密顿量,或射频场(rf)哈密顿量来描述解耦或重耦合序列的效率。进入一个相互作用的坐标系也可以使部分依赖于时间的哈密顿量与时间无关,就像通常(塞曼)旋转坐标系中的rf场哈密顿量。消除占主导地位的术语通常可以更好地理解自旋动力学的细节。进入一个相互作用的框架也可以减少哈密顿量中的能级分裂,从而导致扰动扩展,平均哈密顿量或Floquet理论的更快收敛。通常,没有明显的选择要使用的交互框架,但有些可能比其他更方便。以频率选择性偶极重耦合为例,讨论了不同选择的相互作用框架的差异、优缺点。它们总是包含完整的射频哈密顿量,但也可以包含自旋的化学位移,也可以包含或不包含脉冲序列一个周期内的有效场。
{"title":"Interaction frames in solid-state NMR: A case study for chemical-shift-selective irradiation schemes","authors":"Matías Chávez,&nbsp;Matthias Ernst","doi":"10.1016/j.ssnmr.2022.101834","DOIUrl":"10.1016/j.ssnmr.2022.101834","url":null,"abstract":"<div><p>Interaction frames play an important role in describing and understanding experimental schemes in magnetic resonance. They are often used to eliminate dominating parts of the spin Hamiltonian, e.g., the Zeeman Hamiltonian in the usual (Zeeman) rotating frame, or the radio-frequency-field (rf) Hamiltonian to describe the efficiency of decoupling or recoupling sequences. Going into an interaction frame can also make parts of a time-dependent Hamiltonian time independent like the rf-field Hamiltonian in the usual (Zeeman) rotating frame. Eliminating the dominant term often allows a better understanding of the details of the spin dynamics. Going into an interaction frame can also reduces the energy-level splitting in the Hamiltonian leading to a faster convergence of perturbation expansions, average Hamiltonian, or Floquet theory. Often, there is no obvious choice of the interaction frame to use but some can be more convenient than others. Using the example of frequency-selective dipolar recoupling, we discuss the differences, advantages, and disadvantages of different choices of interaction frames. They always include the complete radio-frequency Hamiltonian but can also contain the chemical shifts of the spins and may or may not contain the effective fields over one cycle of the pulse sequence.</p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"122 ","pages":"Article 101834"},"PeriodicalIF":3.2,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0926204022000637/pdfft?md5=34c8cd6a39dc8784f9deca371b37fc6d&pid=1-s2.0-S0926204022000637-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10341544","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Monitoring the influence of additives on the crystallization processes of glycine with dynamic nuclear polarization solid-state NMR 动态核极化固体核磁共振监测添加剂对甘氨酸结晶过程的影响
IF 3.2 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2022-12-01 DOI: 10.1016/j.ssnmr.2022.101836
Marie Juramy , Paolo Cerreia Vioglio , Fabio Ziarelli , Stéphane Viel , Pierre Thureau , Giulia Mollica

Crystallization is fundamental in many domains, and the investigation of the sequence of solid phases produced as a function of crystallization time is thus key to understand and control crystallization processes. Here, we used a solid-state nuclear magnetic resonance strategy to monitor the crystallization process of glycine, which is a model compound in polymorphism, under the influence of crystallizing additives, such as methanol or sodium chloride. More specifically, our strategy is based on a combination of low-temperatures and dynamic nuclear polarization (DNP) to trap and detect transient crystallizing forms, which may be present only in low quantities. Interestingly, our results show that these additives yield valuable DNP signal enhancements even in the absence of glycerol within the crystallizing solution.

结晶是许多领域的基础,研究结晶时间对固相序列的影响是理解和控制结晶过程的关键。在此,我们使用固态核磁共振策略来监测甘氨酸的结晶过程,甘氨酸是一种多态模型化合物,在结晶添加剂(如甲醇或氯化钠)的影响下。更具体地说,我们的策略是基于低温和动态核极化(DNP)的结合来捕获和检测瞬态结晶形式,这可能只存在于少量。有趣的是,我们的结果表明,即使在结晶溶液中没有甘油,这些添加剂也能产生有价值的DNP信号增强。
{"title":"Monitoring the influence of additives on the crystallization processes of glycine with dynamic nuclear polarization solid-state NMR","authors":"Marie Juramy ,&nbsp;Paolo Cerreia Vioglio ,&nbsp;Fabio Ziarelli ,&nbsp;Stéphane Viel ,&nbsp;Pierre Thureau ,&nbsp;Giulia Mollica","doi":"10.1016/j.ssnmr.2022.101836","DOIUrl":"10.1016/j.ssnmr.2022.101836","url":null,"abstract":"<div><p>Crystallization is fundamental in many domains, and the investigation of the sequence of solid phases produced as a function of crystallization time is thus key to understand and control crystallization processes. Here, we used a solid-state nuclear magnetic resonance strategy to monitor the crystallization process of glycine, which is a model compound in polymorphism, under the influence of crystallizing additives, such as methanol or sodium chloride. More specifically, our strategy is based on a combination of low-temperatures and dynamic nuclear polarization (DNP) to trap and detect transient crystallizing forms, which may be present only in low quantities. Interestingly, our results show that these additives yield valuable DNP signal enhancements even in the absence of glycerol within the crystallizing solution.</p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"122 ","pages":"Article 101836"},"PeriodicalIF":3.2,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0926204022000650/pdfft?md5=43ea233eefc61f244122c5bcc4bf4599&pid=1-s2.0-S0926204022000650-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10335669","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Teaching product operators using the Vega diagram 教产品操作员使用织女星图
IF 3.2 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2022-12-01 DOI: 10.1016/j.ssnmr.2022.101830
Jörg Matysik , Chen Song , Pavlo Bielytskyi , A. Alia

We all will remember Shimon Vega (1942–2021) as wonderful human and scientist. Paramount examples of his scientific work are quoted in this special issue dedicated to his memory. This article is dedicated to remember Shimon Vega as a fantastic teacher. To introduce to the world of product operators, Shimon created a simple scheme that we now call the Vega diagram. It allows for fast analysis of pulse sequences for AX spin systems. Here, we want to document this scheme for future generations.

我们都会记得西蒙·维加(1942-2021)是一位出色的人类和科学家。在这期纪念他的特刊中引用了他科学工作中最重要的例子。这篇文章是为了纪念西蒙·维加这位出色的老师。为了向产品操作员的世界介绍,Shimon创建了一个简单的方案,我们现在称之为Vega图。它允许快速分析AX自旋系统的脉冲序列。在这里,我们想为后代记录下这个计划。
{"title":"Teaching product operators using the Vega diagram","authors":"Jörg Matysik ,&nbsp;Chen Song ,&nbsp;Pavlo Bielytskyi ,&nbsp;A. Alia","doi":"10.1016/j.ssnmr.2022.101830","DOIUrl":"10.1016/j.ssnmr.2022.101830","url":null,"abstract":"<div><p>We all will remember Shimon Vega (1942–2021) as wonderful human and scientist. Paramount examples of his scientific work are quoted in this special issue dedicated to his memory. This article is dedicated to remember Shimon Vega as a fantastic teacher. To introduce to the world of <em>product operators</em>, Shimon created a simple scheme that we now call the <em>Vega diagram</em>. It allows for fast analysis of pulse sequences for AX spin systems. Here, we want to document this scheme for future generations.</p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"122 ","pages":"Article 101830"},"PeriodicalIF":3.2,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"33501305","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Improving the accuracy of GIPAW chemical shielding calculations with cluster and fragment corrections 通过簇和片段校正提高GIPAW化学屏蔽计算的准确性
IF 3.2 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2022-12-01 DOI: 10.1016/j.ssnmr.2022.101832
Joshua D. Hartman , James K. Harper

Ab initio methods for predicting NMR parameters in the solid state are an essential tool for assigning experimental spectra and play an increasingly important role in structural characterizations. Recently, a molecular correction (MC) technique has been developed which combines the strengths of plane-wave methods (GIPAW) with single molecule calculations employing Gaussian basis sets. The GIPAW + MC method relies on a periodic calculation performed at a lower level of theory to model the crystalline environment. The GIPAW result is then corrected using a single molecule calculation performed at a higher level of theory. The success of the GIPAW + MC method in predicting a range of NMR parameters is a result of the highly local character of the tensors underlying the NMR observable. However, in applications involving strong intermolecular interactions we find that expanding the region treated at the higher level of theory more accurately captures local many-body contributions to the N15 NMR chemical shielding (CS) tensor. We propose alternative corrections to GIPAW which capture interactions between adjacent molecules at a higher level of theory using either fragment or cluster-based calculations. Benchmark calculations performed on N15 and C13 data sets show that these advanced GIPAW-corrected calculations improve the accuracy of chemical shielding tensor predictions relative to existing methods. Specifically, cluster-based N15 corrections show a 24% and 17% reduction in RMS error relative to GIPAW and GIPAW + MC calculations, respectively. Comparing the benchmark data sets using multiple computational models demonstrates that N15 CS tensor calculations are significantly more sensitive to intermolecular interactions relative to C13. However, fragment and cluster-based corrections that include direct hydrogen bond partners are sufficient for optimizing the accuracy of GIPAW-corrected methods. Finally, GIPAW

从头算方法预测固体核磁共振参数是分配实验光谱的重要工具,在结构表征中发挥着越来越重要的作用。近年来,一种将平面波方法(GIPAW)的优点与采用高斯基集的单分子计算相结合的分子校正技术得到了发展。GIPAW + MC方法依赖于在较低理论水平上进行的周期性计算来模拟晶体环境。然后使用在更高的理论水平上执行的单分子计算对GIPAW结果进行校正。GIPAW + MC方法在预测核磁共振参数范围方面的成功是核磁共振观测值下张量的高度局域性的结果。然而,在涉及强分子间相互作用的应用中,我们发现在更高的理论水平上扩展区域更准确地捕获局部多体对N15核磁共振化学屏蔽(CS)张量的贡献。我们提出了对GIPAW的替代修正,它使用片段或基于簇的计算在更高的理论水平上捕获相邻分子之间的相互作用。在N15和C13数据集上进行的基准计算表明,相对于现有方法,这些先进的gipaw校正计算提高了化学屏蔽张量预测的准确性。具体来说,与GIPAW和GIPAW + MC计算相比,基于聚类的N15修正分别显示了24%和17%的均数误差降低。使用多种计算模型比较基准数据集表明,相对于C13, N15 CS张量计算对分子间相互作用明显更敏感。然而,包括直接氢键伙伴在内的基于片段和簇的校正足以优化gipaw校正方法的准确性。最后,将gipaw校正方法应用于非对称单元中含有两个鸟苷分子的二水合物鸟苷的核磁共振谱分配。
{"title":"Improving the accuracy of GIPAW chemical shielding calculations with cluster and fragment corrections","authors":"Joshua D. Hartman ,&nbsp;James K. Harper","doi":"10.1016/j.ssnmr.2022.101832","DOIUrl":"10.1016/j.ssnmr.2022.101832","url":null,"abstract":"<div><p><span>Ab initio methods<span> for predicting NMR parameters in the solid state are an essential tool for assigning experimental spectra and play an increasingly important role in structural characterizations. Recently, a molecular correction (MC) technique has been developed which combines the strengths<span> of plane-wave methods (GIPAW) with single molecule calculations employing Gaussian basis sets. The GIPAW + MC method relies on a periodic calculation performed at a lower level of theory to model the crystalline environment. The GIPAW result is then corrected using a single molecule calculation performed at a higher level of theory. The success of the GIPAW + MC method in predicting a range of NMR parameters is a result of the highly local character of the tensors underlying the NMR observable. However, in applications involving strong intermolecular interactions we find that expanding the region treated at the higher level of theory more accurately captures local many-body contributions to the </span></span></span><span><math><mmultiscripts><mrow><mi>N</mi></mrow><none></none><none></none><mprescripts></mprescripts><none></none><mrow><mn>15</mn></mrow></mmultiscripts></math></span> NMR chemical shielding (CS) tensor. We propose alternative corrections to GIPAW which capture interactions between adjacent molecules at a higher level of theory using either fragment or cluster-based calculations. Benchmark calculations performed on <span><math><mmultiscripts><mrow><mi>N</mi></mrow><none></none><none></none><mprescripts></mprescripts><none></none><mrow><mn>15</mn></mrow></mmultiscripts></math></span> and <span><math><mmultiscripts><mrow><mi>C</mi></mrow><none></none><none></none><mprescripts></mprescripts><none></none><mrow><mn>13</mn></mrow></mmultiscripts></math></span> data sets show that these advanced GIPAW-corrected calculations improve the accuracy of chemical shielding tensor predictions relative to existing methods. Specifically, cluster-based <span><math><mmultiscripts><mrow><mi>N</mi></mrow><none></none><none></none><mprescripts></mprescripts><none></none><mrow><mn>15</mn></mrow></mmultiscripts></math></span> corrections show a 24% and 17% reduction in RMS error relative to GIPAW and GIPAW + MC calculations, respectively. Comparing the benchmark data sets using multiple computational models demonstrates that <span><math><mmultiscripts><mrow><mi>N</mi></mrow><none></none><none></none><mprescripts></mprescripts><none></none><mrow><mn>15</mn></mrow></mmultiscripts></math></span> CS tensor calculations are significantly more sensitive to intermolecular interactions relative to <span><math><mmultiscripts><mrow><mi>C</mi></mrow><none></none><none></none><mprescripts></mprescripts><none></none><mrow><mn>13</mn></mrow></mmultiscripts></math></span><span>. However, fragment and cluster-based corrections that include direct hydrogen bond<span> partners are sufficient for optimizing the accuracy of GIPAW-corrected methods. Finally, GIPAW","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"122 ","pages":"Article 101832"},"PeriodicalIF":3.2,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10335631","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 3
A case study on the influence of hydrophilicity on the signal enhancement by dynamic nuclear polarization 亲水性对动态核极化信号增强影响的实例研究
IF 3.2 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2022-12-01 DOI: 10.1016/j.ssnmr.2022.101829
Sonja C. Döller , Torsten Gutmann , Markus Hoffmann , Gerd Buntkowsky

In this work, the behavior of four different commercially available polarizing agents is investigated employing the non-ionic model surfactant 1-octanol as analyte. A relative method for the comparison of the proportion of the direct and indirect polarization transfer pathways is established, allowing a direct comparison of the polarization efficacy for different radicals and different parts of the 1-octanol molecule despite differences in radical concentration or sample amount. With this approach, it could be demonstrated that the hydrophilicity is a key factor in the way polarization is transferred from the polarizing agent to the analyte. These findings are confirmed by the determination of buildup times Tb, illustrating that the choice of polarizing agent plays an essential role in ensuring an optimal polarization transfer and therefore the maximum amount of enhancement possible for DNP enhanced NMR measurements.

在这项工作中,研究了四种不同的市售极化剂的行为,采用非离子模型表面活性剂1-辛醇作为分析物。建立了一种比较直接和间接极化转移途径比例的相对方法,可以直接比较不同自由基和1-辛醇分子不同部位的极化效率,而不管自由基浓度或样品量的不同。通过这种方法,可以证明亲水性是极化从极化剂转移到分析物的关键因素。这些发现通过累积时间Tb的测定得到了证实,说明极化剂的选择在确保最佳极化转移和DNP增强核磁共振测量的最大增强量方面起着至关重要的作用。
{"title":"A case study on the influence of hydrophilicity on the signal enhancement by dynamic nuclear polarization","authors":"Sonja C. Döller ,&nbsp;Torsten Gutmann ,&nbsp;Markus Hoffmann ,&nbsp;Gerd Buntkowsky","doi":"10.1016/j.ssnmr.2022.101829","DOIUrl":"10.1016/j.ssnmr.2022.101829","url":null,"abstract":"<div><p><span>In this work, the behavior of four different commercially available polarizing agents is investigated employing the non-ionic model surfactant<span> 1-octanol as analyte. A relative method for the comparison of the proportion of the direct and indirect polarization transfer<span> pathways is established, allowing a direct comparison of the polarization efficacy for different radicals and different parts of the 1-octanol molecule despite differences in radical concentration or sample amount. With this approach, it could be demonstrated that the hydrophilicity is a key factor in the way polarization is transferred from the polarizing agent to the analyte. These findings are confirmed by the determination of buildup times T</span></span></span><sub>b</sub><span>, illustrating that the choice of polarizing agent plays an essential role in ensuring an optimal polarization transfer and therefore the maximum amount of enhancement possible for DNP enhanced NMR measurements.</span></p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"122 ","pages":"Article 101829"},"PeriodicalIF":3.2,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10397171","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Improved resolution for spin-3/2 isotopes in solids via the indirect NMR detection of triple-quantum coherences using the T-HMQC sequence 利用T-HMQC序列间接核磁共振检测三量子相干提高固体中自旋3/2同位素的分辨率
IF 3.2 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2022-12-01 DOI: 10.1016/j.ssnmr.2022.101835
Racha Bayzou , Julien Trébosc , Ivan Hung , Zhehong Gan , Andrew Rankin , Olivier Lafon , Jean-Paul Amoureux

The indirect NMR detection of quadrupolar nuclei in solids under magic-angle spinning (MAS) is possible with the through-space HMQC (heteronuclear multiple-quantum coherence) scheme incorporating the TRAPDOR (transfer of population in double-resonance) dipolar recoupling. This sequence, called T-HMQC, exhibits limited t1-noise. In this contribution, with the help of numerical simulations of spin dynamics, we show that most of the time, the fastest coherence transfer in the T-HMQC scheme is achieved when TRAPDOR recoupling employs the highest radiofrequency (rf) field compatible with the probe specifications. We also demonstrate how the indirect detection of the triple-quantum (3Q) coherences of spin-3/2 quadrupolar nuclei in solids improves the spectral resolution for these isotopes. The sequence is then called T-HMQC3. We demonstrate the gain in resolution provided by this sequence for the indirect proton detection of 35Cl nuclei in l-histidine∙HCl and l-cysteine∙HCl, as well as that of 23Na isotope in NaH2PO4. These experiments indicate that the gain in resolution depends on the relative values of the chemical and quadrupolar-induced shifts (QIS) for the different spin-3/2 species. In the case of NaH2PO4, we show that the transfer efficiency of the T-HMQC3 sequence employing an rf-field of 80 kHz with a MAS frequency of 62.5 kHz reaches 75% of that of the t1-noise eliminated (TONE) dipolar-mediated HMQC (D-HMQC) scheme.

利用结合TRAPDOR(双共振居群转移)偶极重偶联的跨空间HMQC(异核多量子相干)方案,可以在魔角自旋(MAS)下对固体中的四极核进行间接核磁共振检测。这个序列被称为T-HMQC,表现出有限的t1噪声。在这项贡献中,借助自旋动力学的数值模拟,我们表明,在大多数情况下,当TRAPDOR重新耦合采用与探头规格兼容的最高射频(rf)场时,T-HMQC方案中最快的相干转移是实现的。我们还演示了间接检测固体中自旋3/2四极核的三量子(3Q)相干如何提高这些同位素的光谱分辨率。这个序列被称为T-HMQC3。我们展示了该序列为l-组氨酸∙HCl和l-半胱氨酸∙HCl中35Cl核的间接质子检测以及NaH2PO4中23Na同位素的分辨率提供的增益。这些实验表明,分辨率增益取决于不同自旋为3/2的物质的化学和四极诱导位移(QIS)的相对值。在NaH2PO4的情况下,我们表明,采用80 kHz的rfid场和62.5 kHz的MAS频率的T-HMQC3序列的传输效率达到了t1噪声消除(TONE)偶极体介导HMQC (D-HMQC)方案的75%。
{"title":"Improved resolution for spin-3/2 isotopes in solids via the indirect NMR detection of triple-quantum coherences using the T-HMQC sequence","authors":"Racha Bayzou ,&nbsp;Julien Trébosc ,&nbsp;Ivan Hung ,&nbsp;Zhehong Gan ,&nbsp;Andrew Rankin ,&nbsp;Olivier Lafon ,&nbsp;Jean-Paul Amoureux","doi":"10.1016/j.ssnmr.2022.101835","DOIUrl":"10.1016/j.ssnmr.2022.101835","url":null,"abstract":"<div><p><span>The indirect NMR detection of quadrupolar nuclei<span> in solids under magic-angle spinning (MAS) is possible with the through-space HMQC (heteronuclear multiple-quantum coherence) scheme incorporating the TRAPDOR (transfer of population in double-resonance) dipolar recoupling. This sequence, called T-HMQC, exhibits limited </span></span><em>t</em><sub>1</sub>-noise. In this contribution, with the help of numerical simulations of spin dynamics, we show that most of the time, the fastest coherence transfer in the T-HMQC scheme is achieved when TRAPDOR recoupling employs the highest radiofrequency (rf) field compatible with the probe specifications. We also demonstrate how the indirect detection of the triple-quantum (3Q) coherences of spin-3/2 quadrupolar nuclei in solids improves the spectral resolution for these isotopes. The sequence is then called T-HMQC<sub>3</sub>. We demonstrate the gain in resolution provided by this sequence for the indirect proton detection of <sup>35</sup>Cl nuclei in <span>l</span>-histidine∙HCl and <span>l</span>-cysteine∙HCl, as well as that of <sup>23</sup>Na isotope in NaH<sub>2</sub>PO<sub>4</sub>. These experiments indicate that the gain in resolution depends on the relative values of the chemical and quadrupolar-induced shifts (QIS) for the different spin-3/2 species. In the case of NaH<sub>2</sub>PO<sub>4</sub>, we show that the transfer efficiency of the T-HMQC<sub>3</sub> sequence employing an rf-field of 80 kHz with a MAS frequency of 62.5 kHz reaches 75% of that of the <em>t</em><sub>1</sub>-noise eliminated (TONE) dipolar-mediated HMQC (<em>D</em>-HMQC) scheme.</p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"122 ","pages":"Article 101835"},"PeriodicalIF":3.2,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10337117","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
19F fast MAS (60–111 kHz) dipolar and scalar based correlation spectroscopy of organic molecules and pharmaceutical formulations 有机分子和药物制剂的19F快速MAS (60-111 kHz)偶极和标量相关光谱
IF 3.2 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2022-12-01 DOI: 10.1016/j.ssnmr.2022.101831
Gal Porat-Dahlerbruch , Jochem Struppe , Caitlin M. Quinn , Angela M. Gronenborn , Tatyana Polenova

19F magic angle spinning (MAS) NMR spectroscopy is a powerful tool for characterization of fluorinated solids. The recent development of 19F MAS NMR probes, operating at spinning frequencies of 60–111 kHz, enabled analysis of systems spanning from organic molecules to pharmaceutical formulations to biological assemblies, with unprecedented resolution. Herein, we systematically evaluate the benefits of high MAS frequencies (60–111 kHz) for 1D and 2D 19F-detected experiments in two pharmaceuticals, the antimalarial drug mefloquine and a formulation of the cholesterol-lowering drug atorvastatin calcium. We demonstrate that 1H decoupling is essential and that scalar-based, heteronuclear single quantum coherence (HSQC) and heteronuclear multiple quantum coherence (HMQC) correlation experiments become feasible and efficient at the MAS frequency of 100 kHz. This study opens doors for the applications of high frequency 19F MAS NMR to a wide range of problems in chemistry and biology.

19F魔角旋转(MAS)核磁共振波谱是表征氟化固体的有力工具。最近开发的19fmas NMR探针,在60-111 kHz的旋转频率下工作,能够以前所未有的分辨率分析从有机分子到药物配方到生物组件的系统。在此,我们系统地评估了高MAS频率(60-111 kHz)在两种药物(抗疟疾药物甲氟喹和降胆固醇药物阿托伐他汀钙制剂)的1D和2D 19f检测实验中的益处。我们证明了1H解耦是必不可少的,并且在100 kHz的MAS频率下,基于标量的异核单量子相干(HSQC)和异核多量子相干(HMQC)相关实验变得可行和有效。该研究为高频19fmas NMR在化学和生物学领域的广泛应用打开了大门。
{"title":"19F fast MAS (60–111 kHz) dipolar and scalar based correlation spectroscopy of organic molecules and pharmaceutical formulations","authors":"Gal Porat-Dahlerbruch ,&nbsp;Jochem Struppe ,&nbsp;Caitlin M. Quinn ,&nbsp;Angela M. Gronenborn ,&nbsp;Tatyana Polenova","doi":"10.1016/j.ssnmr.2022.101831","DOIUrl":"https://doi.org/10.1016/j.ssnmr.2022.101831","url":null,"abstract":"<div><p><sup>19</sup><span>F magic angle spinning (MAS) NMR spectroscopy is a powerful tool for characterization of fluorinated solids. The recent development of </span><sup>19</sup><span>F MAS NMR probes, operating at spinning frequencies of 60–111 kHz, enabled analysis of systems spanning from organic molecules to pharmaceutical formulations to biological assemblies, with unprecedented resolution. Herein, we systematically evaluate the benefits of high MAS frequencies (60–111 kHz) for 1D and 2D </span><sup>19</sup><span>F-detected experiments in two pharmaceuticals, the antimalarial drug<span> mefloquine<span> and a formulation of the cholesterol-lowering drug atorvastatin calcium. We demonstrate that </span></span></span><sup>1</sup><span><span>H decoupling is essential and that scalar-based, heteronuclear single quantum coherence (HSQC) and </span>heteronuclear multiple quantum coherence (HMQC) correlation experiments become feasible and efficient at the MAS frequency of 100 kHz. This study opens doors for the applications of high frequency </span><sup>19</sup><span>F MAS NMR to a wide range of problems in chemistry and biology.</span></p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"122 ","pages":"Article 101831"},"PeriodicalIF":3.2,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"91684900","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Solid-state NMR methods for the characterization of bioconjugations and protein-material interactions 固体核磁共振方法表征生物偶联和蛋白质-材料相互作用
IF 3.2 3区 化学 Q4 CHEMISTRY, PHYSICAL Pub Date : 2022-12-01 DOI: 10.1016/j.ssnmr.2022.101828
Linda Cerofolini , Giacomo Parigi , Enrico Ravera , Marco Fragai , Claudio Luchinat

Protein solid-state NMR has evolved dramatically over the last two decades, with the development of new hardware and sample preparation methodologies. This technique is now ripe for complex applications, among which one can count bioconjugation, protein chemistry and functional biomaterials. In this review, we provide our account on this aspect of protein solid-state NMR.

在过去的二十年里,随着新的硬件和样品制备方法的发展,蛋白质固态核磁共振已经发生了巨大的变化。这项技术现在已经成熟,可以用于复杂的应用,其中可以计算生物偶联,蛋白质化学和功能生物材料。本文综述了蛋白质固态核磁共振在这方面的研究进展。
{"title":"Solid-state NMR methods for the characterization of bioconjugations and protein-material interactions","authors":"Linda Cerofolini ,&nbsp;Giacomo Parigi ,&nbsp;Enrico Ravera ,&nbsp;Marco Fragai ,&nbsp;Claudio Luchinat","doi":"10.1016/j.ssnmr.2022.101828","DOIUrl":"10.1016/j.ssnmr.2022.101828","url":null,"abstract":"<div><p><span>Protein solid-state NMR has evolved dramatically over the last two decades, with the development of new hardware and sample preparation methodologies. This technique is now ripe for complex applications, among which one can count bioconjugation, protein </span>chemistry and functional biomaterials. In this review, we provide our account on this aspect of protein solid-state NMR.</p></div>","PeriodicalId":21937,"journal":{"name":"Solid state nuclear magnetic resonance","volume":"122 ","pages":"Article 101828"},"PeriodicalIF":3.2,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10341510","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Solid state nuclear magnetic resonance
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1