Jules Ferreira, Laure Desutter-Grandcolas, André Nel, Hugo Josse, Lucas Denadai de Campos
Fossils are valuable indicators of the evolutionary history of the clades to which they belong to, especially when they are incorporated as terminal taxa in a total-evidence phylogeny. According to their state of preservation, fossils are often incompletely described for key morphological characters, such as genitalic structures. Here, the internal parts of the genitalia of a male fossil cricket from Cretaceous amber, †Picogryllus carentonensis Josse & Desutter-Grandcolas (Oecanthidae, Podoscirtinae), together with other key morphological characters (i.e., metanotal structures and tibial spurs), were reconstructed for the first time by 3D microtomography. Total-evidence phylogeny and dating combining morphological data (fossils and extant taxa), molecular data (extant taxa only) and time calibration (fossil dates) were performed to evaluate the tempo and mode of evolution of the cricket family Oecanthidae. Divergence time estimates were thus refined and the patterns of transformation for key morphological structures contrasted through the analysis of phylogenetic morphological partitions. Our results show that Oecanthidae date back to the Upper Jurassic (Oxfordian, around 162 Ma) and attest to the presence of the Podoscirtinae in Western Europe during the Lower Cretaceous. Morphological evolution may have been driven by the conquest of new resources (as shown by leg evolution in ancestral Oecanthidae) and/or the ‘conquest of silence’ (as shown by repetitive and definitive losses of acoustic structures). By contrast, genitalia evolution proved more diffuse.
{"title":"First 3D reconstruction of the male genitalia of a Cretaceous fossil cricket: Diving into the evolutionary history of the Oecanthidae family (Orthoptera: Grylloidea) with the incorporation of new fossils in its phylogeny and a total-evidence dating approach","authors":"Jules Ferreira, Laure Desutter-Grandcolas, André Nel, Hugo Josse, Lucas Denadai de Campos","doi":"10.1111/syen.12625","DOIUrl":"10.1111/syen.12625","url":null,"abstract":"<p>Fossils are valuable indicators of the evolutionary history of the clades to which they belong to, especially when they are incorporated as terminal taxa in a total-evidence phylogeny. According to their state of preservation, fossils are often incompletely described for key morphological characters, such as genitalic structures. Here, the internal parts of the genitalia of a male fossil cricket from Cretaceous amber, †<i>Picogryllus carentonensis</i> Josse & Desutter-Grandcolas (Oecanthidae, Podoscirtinae), together with other key morphological characters (i.e., metanotal structures and tibial spurs), were reconstructed for the first time by 3D microtomography. Total-evidence phylogeny and dating combining morphological data (fossils and extant taxa), molecular data (extant taxa only) and time calibration (fossil dates) were performed to evaluate the tempo and mode of evolution of the cricket family Oecanthidae. Divergence time estimates were thus refined and the patterns of transformation for key morphological structures contrasted through the analysis of phylogenetic morphological partitions. Our results show that Oecanthidae date back to the Upper Jurassic (Oxfordian, around 162 Ma) and attest to the presence of the Podoscirtinae in Western Europe during the Lower Cretaceous. Morphological evolution may have been driven by the conquest of new resources (as shown by leg evolution in ancestral Oecanthidae) and/or the ‘conquest of silence’ (as shown by repetitive and definitive losses of acoustic structures). By contrast, genitalia evolution proved more diffuse.</p>","PeriodicalId":22126,"journal":{"name":"Systematic Entomology","volume":"49 3","pages":"429-446"},"PeriodicalIF":4.8,"publicationDate":"2024-02-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140008163","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Rolf G. Beutel, Chunpeng Xu, Edmund Jarzembowski, Robin Kundrata, Brendon E. Boudinot, Duane D. McKenna, Jakub Goczał
Recent progress in beetle palaeontology has incited us to re-address the evolutionary history of the group. The Permian †Tshekardocoleidae had elytra that covered the posterior body in a loose tent-like manner. The formation of elytral epipleura and a tight fit of elytra and abdomen were important evolutionary transformations in the Middle Permian, resulting in a tightly enclosed subelytral space. Permian families were likely associated with dead wood of gymnospermous trees. The end-Permian extinction event resulted in a turnover in the composition of beetle faunas, especially a decline of large-bodied wood-associated forms. Adephaga and Myxophaga underwent a first wave of diversification in the Triassic. Polyphaga are very rare in this period. The first wave of diversification of this suborder occurs in the Jurassic, with fossils of Elateriformia, Staphyliniformia and Cucujiformia. The Cretaceous fossil record has been tremendously enriched by the discovery of amber inclusions. Numerous fossils represent all major polyphagan lineages and also the remaining suborders. Improved analytical methods for documenting and placing extinct taxa are discussed. Different factors have played a role in the diversification of beetles. The enormous number of species associated with flowering plants, and timing and patterns of diversification in phytophagous lineages indicate that the angiosperm radiation played a major role in beetle macroevolution. Moreover, the evolution of intimate partnerships with symbionts and the acquisition of novel genes—obtained from fungi and bacteria via horizontal gene transfers—facilitated the use of plant material as a food source and were key innovations in the diversification of plant-feeding beetles.
{"title":"The evolutionary history of Coleoptera (Insecta) in the late Palaeozoic and the Mesozoic","authors":"Rolf G. Beutel, Chunpeng Xu, Edmund Jarzembowski, Robin Kundrata, Brendon E. Boudinot, Duane D. McKenna, Jakub Goczał","doi":"10.1111/syen.12623","DOIUrl":"10.1111/syen.12623","url":null,"abstract":"<p>Recent progress in beetle palaeontology has incited us to re-address the evolutionary history of the group. The Permian †Tshekardocoleidae had elytra that covered the posterior body in a loose tent-like manner. The formation of elytral epipleura and a tight fit of elytra and abdomen were important evolutionary transformations in the Middle Permian, resulting in a tightly enclosed subelytral space. Permian families were likely associated with dead wood of gymnospermous trees. The end-Permian extinction event resulted in a turnover in the composition of beetle faunas, especially a decline of large-bodied wood-associated forms. Adephaga and Myxophaga underwent a first wave of diversification in the Triassic. Polyphaga are very rare in this period. The first wave of diversification of this suborder occurs in the Jurassic, with fossils of Elateriformia, Staphyliniformia and Cucujiformia. The Cretaceous fossil record has been tremendously enriched by the discovery of amber inclusions. Numerous fossils represent all major polyphagan lineages and also the remaining suborders. Improved analytical methods for documenting and placing extinct taxa are discussed. Different factors have played a role in the diversification of beetles. The enormous number of species associated with flowering plants, and timing and patterns of diversification in phytophagous lineages indicate that the angiosperm radiation played a major role in beetle macroevolution. Moreover, the evolution of intimate partnerships with symbionts and the acquisition of novel genes—obtained from fungi and bacteria via horizontal gene transfers—facilitated the use of plant material as a food source and were key innovations in the diversification of plant-feeding beetles.</p>","PeriodicalId":22126,"journal":{"name":"Systematic Entomology","volume":"49 3","pages":"355-388"},"PeriodicalIF":4.8,"publicationDate":"2024-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/syen.12623","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139781363","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Synthetic studies of arthropod systematics and biodiversity are hindered by overreliance on ‘preferred’ semaphoronts, those life stages (typically adult males) that provide the most taxonomically distinctive characters. However, modern sequence-based methods for inventory have no such limitations and permit incorporation of any and all representatives of a species. Here, we briefly review the growth and potential of these approaches to faunistic and systematic studies and share results from our own recent work that illustrate the value that other morphs, immature stages and females added to these studies.
{"title":"Overcoming life stage-centric biases illuminates arthropod diversity, systematics and biology","authors":"Michael S. Caterino, Ernesto Recuero","doi":"10.1111/syen.12624","DOIUrl":"10.1111/syen.12624","url":null,"abstract":"<p>Synthetic studies of arthropod systematics and biodiversity are hindered by overreliance on ‘preferred’ semaphoronts, those life stages (typically adult males) that provide the most taxonomically distinctive characters. However, modern sequence-based methods for inventory have no such limitations and permit incorporation of any and all representatives of a species. Here, we briefly review the growth and potential of these approaches to faunistic and systematic studies and share results from our own recent work that illustrate the value that other morphs, immature stages and females added to these studies.</p>","PeriodicalId":22126,"journal":{"name":"Systematic Entomology","volume":"49 3","pages":"345-354"},"PeriodicalIF":4.8,"publicationDate":"2024-01-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139657573","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Shilin He, You Ning Su, Ming Kai Tan, Andreas Zwick, Ben H. Warren, Tony Robillard
Natural history collections worldwide house billions of specimens, representing one of the most globally important biobanks. In recent years, the advent of next-generation sequencing has significantly reduced the challenges of obtaining considerable genetic information from historical museum specimens. Crickets in the Australian tribe Eurepini Robillard are a good example of a taxon in which such museomic data have particularly strong potential to advance systematic knowledge, because comprehensive sampling requires decades of work over a very wide area. The tribe currently comprises 64 described species in five genera. Previous studies conflict in the generic relationships inferred for this tribe, all of which are poorly resolved, being based on limited data and sampling. In addition, there has so far been no systematic research for this tribe with extensive taxon sampling, and therefore, the consequence for genus boundaries remains to be investigated. To investigate phylogenetic relationships within Eurepini, we first applied the genome skimming approach to obtain molecular data from a comprehensive sample of Eurepini museum specimens. Of the 69 specimens sampled representing 61 described species, mainly including holotype specimens, we obtained 50 complete and 11 partially complete mitogenomes. Three nuclear genes (H3, 18S, and 28S) were also partially recovered for nearly all of these specimens. Phylogenetic analyses performed with mitogenomes plus three nuclear genes using maximum likelihood and Bayesian inference generated well-supported and highly congruent topologies. Eurepini was strongly recovered monophyletic with eight well-defined groups. These groups are used to revise the systematics of the tribe based on a combination of molecular phylogenetics and morphology. The phylogenetic results support the current definition of three genera (Eurepa Walker, Arilpa Otte & Alexander and Eurepella Otte & Alexander), lead us to redefine three genera (Salmanites Chopard, Napieria Baehr and Piestodactylus Saussure), and define and describe two new genera: Miripella Robillard, Tan & Su gen.nov. and Arrakis Robillard, Tan & Su gen.nov. Our results reinforce the importance of natural history collections as a repository for information on biodiversity and genetics, and provide the first comprehensive and robust phylogenetic framework for future systematic and evolutionary studies of Eurepini.
世界各地的自然历史收藏馆拥有数十亿件标本,是全球最重要的生物库之一。近年来,下一代测序技术的出现大大降低了从博物馆历史标本中获取大量遗传信息的难度。澳大利亚 Eurepini Robillard 部族中的蟋蟀就是一个很好的例子,在这个类群中,博物馆标本数据尤其具有推动系统知识的潜力,因为全面取样需要在非常广泛的区域内进行数十年的工作。该族目前有 5 属 64 个已描述的物种。以往的研究在推断该族的属种关系方面存在冲突,由于数据和取样有限,所有属种关系都没有得到很好的解决。此外,迄今为止还没有对该族进行过广泛的分类群取样的系统研究,因此对属界的影响仍有待调查。为了研究 Eurepini 的系统发育关系,我们首先采用了基因组掠取法,从 Eurepini 博物馆标本的综合样本中获取分子数据。在代表 61 个已描述物种(主要包括主模式标本)的 69 个样本中,我们获得了 50 个完整的有丝分裂基因组和 11 个部分完整的有丝分裂基因组。几乎所有这些标本的三个核基因(H3、18S 和 28S)也得到了部分恢复。使用最大似然法和贝叶斯推断法对有丝分裂基因组和三个核基因进行系统发育分析,得出了支持度高、高度一致的拓扑结构。Eurepini 强烈地恢复了单系,有八个明确的类群。根据分子系统学和形态学的结合,这些群组被用来修订该族的系统学。系统发生学的结果支持目前对三个属(Eurepa Walker、Arilpa Otte & Alexander 和 Eurepella Otte & Alexander)的定义,使我们重新定义了三个属(Salmanites Chopard、Napieria Baehr 和 Piestodactylus Saussure),并定义和描述了两个新属:Miripella Robillard, Tan & Su gen.nov. 和 Arrakis Robillard, Tan & Su gen.nov.我们的研究结果加强了自然历史藏品作为生物多样性和遗传学信息库的重要性,并为未来Eurepini的系统和进化研究提供了第一个全面而稳健的系统发育框架。
{"title":"Museomics, molecular phylogeny and systematic revision of the Eurepini crickets (Orthoptera: Gryllidae: Eneopterinae), with description of two new genera","authors":"Shilin He, You Ning Su, Ming Kai Tan, Andreas Zwick, Ben H. Warren, Tony Robillard","doi":"10.1111/syen.12622","DOIUrl":"10.1111/syen.12622","url":null,"abstract":"<p>Natural history collections worldwide house billions of specimens, representing one of the most globally important biobanks. In recent years, the advent of next-generation sequencing has significantly reduced the challenges of obtaining considerable genetic information from historical museum specimens. Crickets in the Australian tribe Eurepini Robillard are a good example of a taxon in which such museomic data have particularly strong potential to advance systematic knowledge, because comprehensive sampling requires decades of work over a very wide area. The tribe currently comprises 64 described species in five genera. Previous studies conflict in the generic relationships inferred for this tribe, all of which are poorly resolved, being based on limited data and sampling. In addition, there has so far been no systematic research for this tribe with extensive taxon sampling, and therefore, the consequence for genus boundaries remains to be investigated. To investigate phylogenetic relationships within Eurepini, we first applied the genome skimming approach to obtain molecular data from a comprehensive sample of Eurepini museum specimens. Of the 69 specimens sampled representing 61 described species, mainly including holotype specimens, we obtained 50 complete and 11 partially complete mitogenomes. Three nuclear genes (H3, 18S, and 28S) were also partially recovered for nearly all of these specimens. Phylogenetic analyses performed with mitogenomes plus three nuclear genes using maximum likelihood and Bayesian inference generated well-supported and highly congruent topologies. Eurepini was strongly recovered monophyletic with eight well-defined groups. These groups are used to revise the systematics of the tribe based on a combination of molecular phylogenetics and morphology. The phylogenetic results support the current definition of three genera (<i>Eurepa</i> Walker, <i>Arilpa</i> Otte & Alexander and <i>Eurepella</i> Otte & Alexander), lead us to redefine three genera (<i>Salmanites</i> Chopard, <i>Napieria</i> Baehr and <i>Piestodactylus</i> Saussure), and define and describe two new genera: <i>Miripella</i> Robillard, Tan & Su <b>gen.nov.</b> and <i>Arrakis</i> Robillard, Tan & Su <b>gen.nov.</b> Our results reinforce the importance of natural history collections as a repository for information on biodiversity and genetics, and provide the first comprehensive and robust phylogenetic framework for future systematic and evolutionary studies of Eurepini.</p>","PeriodicalId":22126,"journal":{"name":"Systematic Entomology","volume":"49 3","pages":"389-411"},"PeriodicalIF":4.8,"publicationDate":"2024-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/syen.12622","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139647012","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ling Feng, Daniela M. Takiya, Sindhu M. Krishnankutty, Christopher H. Dietrich, Yalin Zhang
Sharpshooters (Cicadellinae), a large subfamily of the Cicadellidae, exhibit a global distribution and a broad array of ecological preferences. To explore the phylogenetic relationships and roles of global historical, biotic and biogeographic processes in the diversification of sharpshooters, we analysed DNA sequence data from three mitochondrial and two nuclear genes for 243 taxa representing all Cicadellinae tribes, generic groups, regional faunas and data of geographic distributions of sharpshooter species compiled from online databases and available literature. The maximum likelihood (ML) and Bayesian inference (BI) analyses strongly support the monophyletic clade including Cicadellinae and Phereurininae. Divergence time estimates and biogeographic analyses suggest that sharpshooters originated in the Neotropical region or were more widespread in Gondwana during the Early Cretaceous and diversified through a combination of ancient vicariance and dispersal following the evolution of angiosperm-dominated habitats. The earliest divergence during the Cretaceous gave rise to Oriental and New World lineages, the latter of which subsequently dispersed into the Old World and gave rise to the diverse endemic fauna of Madagascar. The Oriental lineage shows high diversity and endemism in tropical Asia and the Pacific, with striking distributional discontinuities in Wallacea. These results suggest that a combination of environmental and evolutionary factors including continental-scale vicariance, long-distance dispersal and diversification of terrestrial microhabitats and host plants may explain the diversity of the modern sharpshooter fauna.
箭毒科(Cicadellinae)是蝉科的一个大亚科,分布于全球各地,具有广泛的生态偏好。为了探索系统发育关系以及全球历史、生物和生物地理过程在箭咀鸟多样化过程中的作用,我们分析了代表所有蝉亚科部落、属群、区域动物群的 243 个类群的三个线粒体基因和两个核基因的 DNA 序列数据,以及从在线数据库和现有文献中收集的箭咀鸟物种地理分布数据。最大似然法(ML)和贝叶斯推断法(BI)分析有力地支持了包括蝉形目(Cicadellinae)和箭形目(Phereurinae)在内的单系支系。分化时间估计和生物地理学分析表明,在早白垩世期间,利爪蜥起源于新热带地区或在冈瓦纳更为广泛,在被子植物为主的生境演化过程中,利爪蜥通过古老的沧海桑田和散布相结合的方式实现了多样化。白垩纪的最早分化产生了东方和新世界两个品系,后者随后扩散到旧大陆,并形成了马达加斯加的多种特有动物群。东方种系在热带亚洲和太平洋地区表现出高度的多样性和特有性,而在瓦拉塞斯地区则表现出明显的分布不连续性。这些结果表明,环境和进化因素的综合作用,包括大陆范围的沧海桑田、远距离传播以及陆地微生境和寄主植物的多样化,可以解释现代利爪鱼动物群的多样性。
{"title":"Phylogeny and biogeography of the sharpshooters (Hemiptera: Cicadellidae: Cicadellinae)","authors":"Ling Feng, Daniela M. Takiya, Sindhu M. Krishnankutty, Christopher H. Dietrich, Yalin Zhang","doi":"10.1111/syen.12620","DOIUrl":"10.1111/syen.12620","url":null,"abstract":"<p>Sharpshooters (Cicadellinae), a large subfamily of the Cicadellidae, exhibit a global distribution and a broad array of ecological preferences. To explore the phylogenetic relationships and roles of global historical, biotic and biogeographic processes in the diversification of sharpshooters, we analysed DNA sequence data from three mitochondrial and two nuclear genes for 243 taxa representing all Cicadellinae tribes, generic groups, regional faunas and data of geographic distributions of sharpshooter species compiled from online databases and available literature. The maximum likelihood (ML) and Bayesian inference (BI) analyses strongly support the monophyletic clade including Cicadellinae and Phereurininae. Divergence time estimates and biogeographic analyses suggest that sharpshooters originated in the Neotropical region or were more widespread in Gondwana during the Early Cretaceous and diversified through a combination of ancient vicariance and dispersal following the evolution of angiosperm-dominated habitats. The earliest divergence during the Cretaceous gave rise to Oriental and New World lineages, the latter of which subsequently dispersed into the Old World and gave rise to the diverse endemic fauna of Madagascar. The Oriental lineage shows high diversity and endemism in tropical Asia and the Pacific, with striking distributional discontinuities in Wallacea. These results suggest that a combination of environmental and evolutionary factors including continental-scale vicariance, long-distance dispersal and diversification of terrestrial microhabitats and host plants may explain the diversity of the modern sharpshooter fauna.</p>","PeriodicalId":22126,"journal":{"name":"Systematic Entomology","volume":"49 2","pages":"314-329"},"PeriodicalIF":4.8,"publicationDate":"2024-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139410182","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Zhen Ye, Zezhong Jin, Dan A. Polhemus, Siqi Wang, Siying Fu, Huanhuan Yang, Mu Qiao, Wenjun Bu
Water crickets of the subfamily Haloveliinae are semi-aquatic bugs occurring in freshwater and marine habitats throughout the Indo-Australian region, presently including six genera with more than 80 extant species. Whether lineage diversification in Haloveliinae is associated with the utilization of new ecological niches caused by transition events between freshwater and marine habitats remains poorly understood. We investigate the evolutionary history of Haloveliinae using large-scale phylogenomic datasets and a set of novel redefined morphological characters based on 24 ingroup taxa representing all recognized genera. Our phylogenetic results based on the novel datasets definitively indicate that the freshwater genus Strongylovelia Esaki as currently defined is paraphyletic and supports the establishment of a new genus: Metavelia gen. nov., including three congeneric species: Metavelia patiooni comb. nov. (type species), Metavelia priori comb. nov. and Metavelia albicolli comb. nov. Reconstruction of ancestral habitats suggests a freshwater origin for the Haloveliinae. Divergence time estimations reveal that the origin of the monophyletic marine clade occurred at around 83 Ma (95% highest posterior density: 71–98 Ma) in the Late Cretaceous, involving a single transition event from freshwater to marine habitats. This time coincides with the period of high global sea levels in the Late Cretaceous. During this period, the marine incursions caused by the massive sea level rise flooded the continental margins, especially in Southeast Asia, where ancestral Haloveliinae were probably distributed. The appearance of new marine habitats after the marine incursions (e.g., intertidal, mangroves and estuarine) probably led to a subsequent establishment and diversification of the marine lineages.
{"title":"Phylogenomic reconstruction illuminates the evolutionary history of freshwater to marine transition in the subfamily Haloveliinae (Hemiptera: Heteroptera: Veliidae)","authors":"Zhen Ye, Zezhong Jin, Dan A. Polhemus, Siqi Wang, Siying Fu, Huanhuan Yang, Mu Qiao, Wenjun Bu","doi":"10.1111/syen.12619","DOIUrl":"10.1111/syen.12619","url":null,"abstract":"<p>Water crickets of the subfamily Haloveliinae are semi-aquatic bugs occurring in freshwater and marine habitats throughout the Indo-Australian region, presently including six genera with more than 80 extant species. Whether lineage diversification in Haloveliinae is associated with the utilization of new ecological niches caused by transition events between freshwater and marine habitats remains poorly understood. We investigate the evolutionary history of Haloveliinae using large-scale phylogenomic datasets and a set of novel redefined morphological characters based on 24 ingroup taxa representing all recognized genera. Our phylogenetic results based on the novel datasets definitively indicate that the freshwater genus <i>Strongylovelia</i> Esaki as currently defined is paraphyletic and supports the establishment of a new genus: <i>Metavelia</i> gen. nov., including three congeneric species: <i>Metavelia patiooni</i> comb. nov. (type species), <i>Metavelia priori</i> comb. nov. and <i>Metavelia albicolli</i> comb. nov. Reconstruction of ancestral habitats suggests a freshwater origin for the Haloveliinae. Divergence time estimations reveal that the origin of the monophyletic marine clade occurred at around 83 Ma (95% highest posterior density: 71–98 Ma) in the Late Cretaceous, involving a single transition event from freshwater to marine habitats. This time coincides with the period of high global sea levels in the Late Cretaceous. During this period, the marine incursions caused by the massive sea level rise flooded the continental margins, especially in Southeast Asia, where ancestral Haloveliinae were probably distributed. The appearance of new marine habitats after the marine incursions (e.g., intertidal, mangroves and estuarine) probably led to a subsequent establishment and diversification of the marine lineages.</p>","PeriodicalId":22126,"journal":{"name":"Systematic Entomology","volume":"49 2","pages":"330-343"},"PeriodicalIF":4.8,"publicationDate":"2024-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139410226","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jun-Jie Gu, Wei Yuan, Li-Bin Ma, André Nel, Zi-Qiang Xu, Ning Wang, Chunxian Jiang, Dong Ren, Yanli Yue
Grylloidea (crickets) and Gryllotalpoidea (mole crickets and ant crickets) are relatively ancient lineages within Orthoptera but their fossil records are not very rich. They are currently considered sister clades within the Gryllidea but with obvious differences in morphology and ecological adaptations. We report a new gryllidean family, †Pseudogryllotalpidae fam. nov. with three new genera and four new species, viz. †Pseudogryllotalpa scalprata gen. et sp. nov., †Unidigitus longialatus gen. et sp. nov., †Petilus zhengi gen. et sp. nov. and †Chunxiania fascia sp. nov. from the mid-Cretaceous of northern Myanmar (ca. 99 million years ago). Their external and short ovipositors and their modified fossorial forelegs suggest a soil-inhabiting preference. This new family exhibits a series of ‘intermediate’ character states between Grylloidea and Gryllotalpoidea and seems to be a ‘transitional’ fossil group linking these two superfamilies. This new family was resolved as a sister group of the extant Gryllotalpoidea and provides a new insight into the relationship and evolution of Grylloidea and Gryllotalpoidea.
Gryllloidea(蟋蟀)和 Gryllotalpoidea(蝼蛄和蚁蟋蟀)是直翅目中相对古老的一系,但它们的化石记录并不丰富。它们目前被认为是蝼蛄科中的姊妹支系,但在形态和生态适应性方面有明显的差异。我们报告了一个新的蝼蛄科,†Pseudogryllotalpidae fam.新种†Pseudogryllotalpa scalprata gen. et sp. nov.、†Unidigitus longialatus gen. et sp. nov.、†Petilus zhengi gen. et sp. nov.它们的外生短产卵器和经过改造的化石前肢表明它们喜欢在土壤中栖息。这个新的科表现出一系列介于 Gryllloidea 和 Gryllotalpoidea 之间的 "中间 "特征,似乎是连接这两个超科的 "过渡 "化石群。这个新的科被认为是现生 Gryllotalpoidea 的姊妹群,为研究 Grylloidea 和 Gryllotalpoidea 的关系和演化提供了新的视角。
{"title":"More than a name: Mid-Cretaceous amber fossils link crickets and mole crickets (Orthoptera, Ensifera)","authors":"Jun-Jie Gu, Wei Yuan, Li-Bin Ma, André Nel, Zi-Qiang Xu, Ning Wang, Chunxian Jiang, Dong Ren, Yanli Yue","doi":"10.1111/syen.12621","DOIUrl":"10.1111/syen.12621","url":null,"abstract":"<p>Grylloidea (crickets) and Gryllotalpoidea (mole crickets and ant crickets) are relatively ancient lineages within Orthoptera but their fossil records are not very rich. They are currently considered sister clades within the Gryllidea but with obvious differences in morphology and ecological adaptations. We report a new gryllidean family, †Pseudogryllotalpidae fam. nov. with three new genera and four new species, viz. †<i>Pseudogryllotalpa scalprata</i> gen. et sp. nov., †<i>Unidigitus longialatus</i> gen. et sp. nov., †<i>Petilus zhengi</i> gen. et sp. nov. and †<i>Chunxiania fascia</i> sp. nov. from the mid-Cretaceous of northern Myanmar (ca. 99 million years ago). Their external and short ovipositors and their modified fossorial forelegs suggest a soil-inhabiting preference. This new family exhibits a series of ‘intermediate’ character states between Grylloidea and Gryllotalpoidea and seems to be a ‘transitional’ fossil group linking these two superfamilies. This new family was resolved as a sister group of the extant Gryllotalpoidea and provides a new insight into the relationship and evolution of Grylloidea and Gryllotalpoidea.</p>","PeriodicalId":22126,"journal":{"name":"Systematic Entomology","volume":"49 3","pages":"412-428"},"PeriodicalIF":4.8,"publicationDate":"2023-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139069742","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Meri Lähteenaro, Jakub Straka, Mattias Forshage, Rasmus Hovmöller, Yuta Nakase, Anders L. Nilsson, John T. Smit, Johan A. A. Nylander, Johannes Bergsten
The twisted-winged parasite genus Stylops has a history of different species concepts with varying host specificity resulting in diverse species diversity estimates in different regions of the Holarctic. The adoption of a supergeneralist species concept in Europe, proposing synonymization of all Western Palaearctic Stylops species, did not facilitate taxonomic clarity and obscured the available life-history data in the region for decades. Lack of molecular data has allowed divergent opinions on species hypotheses and little opportunity for evaluating them in this morphologically challenging genus. To solve these discrepancies and gain novel information about host associations, we applied whole-genome sequencing to 163 specimens, representing a significant portion of putative European species. We evaluate the existing and conflicting species hypotheses with molecular species delimitation using Species bOundry Delimitation using Astral (SODA) and use a maximum likelihood phylogeny to investigate host associations of the species. Furthermore, we evaluate the effect of a number of loci used in SODA for the number of inferred species. We find justification for synonymization of multiple species and indications of undescribed species, as well as new host–parasite relationships. We show that the number of inferred species in SODA is exceedingly and positively correlated with the number of loci used, urging for cautious application. The results of our study bring clarity to the Western Palaearctic species diversity of Stylops. Furthermore, the comprehensive molecular dataset generated in this study will be a valuable resource for future studies on Stylops and the evolution of parasites in general.
{"title":"Phylogenomic species delimitation of the twisted-winged parasite genus Stylops (Strepsiptera)","authors":"Meri Lähteenaro, Jakub Straka, Mattias Forshage, Rasmus Hovmöller, Yuta Nakase, Anders L. Nilsson, John T. Smit, Johan A. A. Nylander, Johannes Bergsten","doi":"10.1111/syen.12618","DOIUrl":"10.1111/syen.12618","url":null,"abstract":"<p>The twisted-winged parasite genus <i>Stylops</i> has a history of different species concepts with varying host specificity resulting in diverse species diversity estimates in different regions of the Holarctic. The adoption of a supergeneralist species concept in Europe, proposing synonymization of all Western Palaearctic <i>Stylops</i> species, did not facilitate taxonomic clarity and obscured the available life-history data in the region for decades. Lack of molecular data has allowed divergent opinions on species hypotheses and little opportunity for evaluating them in this morphologically challenging genus. To solve these discrepancies and gain novel information about host associations, we applied whole-genome sequencing to 163 specimens, representing a significant portion of putative European species. We evaluate the existing and conflicting species hypotheses with molecular species delimitation using Species bOundry Delimitation using Astral (SODA) and use a maximum likelihood phylogeny to investigate host associations of the species. Furthermore, we evaluate the effect of a number of loci used in SODA for the number of inferred species. We find justification for synonymization of multiple species and indications of undescribed species, as well as new host–parasite relationships. We show that the number of inferred species in SODA is exceedingly and positively correlated with the number of loci used, urging for cautious application. The results of our study bring clarity to the Western Palaearctic species diversity of <i>Stylops</i>. Furthermore, the comprehensive molecular dataset generated in this study will be a valuable resource for future studies on <i>Stylops</i> and the evolution of parasites in general.</p>","PeriodicalId":22126,"journal":{"name":"Systematic Entomology","volume":"49 2","pages":"294-313"},"PeriodicalIF":4.8,"publicationDate":"2023-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/syen.12618","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138631425","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jakub Goczał, Rolf G. Beutel, Matthew L. Gimmel, Robin Kundrata
The transformation of the fore wings into strongly sclerotized protective covers (elytra) is considered a fundamental evolutionary innovation of the megadiverse order Coleoptera. Surprisingly, these multifunctional structures have been reduced in many distantly related groups of beetles. Patterns, drivers and the evolutionary implications of this modification have never been comprehensively discussed. In the present study, we surveyed the entire order Coleoptera to analyse the patterns of elytral shortening and loss, with a special focus on prevalence, forms, degree of reduction and the functional background of this significant deviation from the coleopteran ground plan. Our analysis revealed that about 20% of all extant species (roughly 88,000 out of 442,275 spp.), distributed across all four suborders, have shortened or even absent elytra. The elytral loss was more frequent within the polyphagan series Elateriformia and Staphyliniformia. Moreover, we found that elytral reduction has independently occurred multiple times in the evolutionary history of Coleoptera and that it has been driven by a wide array of selective drivers. One of the main drivers is the improved flexibility of the uncovered abdomen and the correlated increased manoeuvrability in narrow spaces, as well as the option of using the flexible abdomen as a steering organ or to facilitate mating. Another common driver is mimicry, where exposed metathoracic wings potentially improve the overall similarity to hymenopteran models. Exposure of the abdomen can facilitate the targeted release of defensive abdominal gland secretions and was most likely a crucial step towards establishing relations with social insects enhanced by chemical communication. In the Elateriformia, and rarely in other lineages, elytral loss is a consequence of paedomorphosis, related to a specific resource-allocation strategy. In many groups of beetles with reduced elytra, alternative defensive strategies can be found. This includes, for instance, aposematic coloration, chemical defence, mimicry or bioluminescence. Direct drivers of elytral loss in many groups remain unclear, and more studies are needed to understand the evolutionary background and implications of this significant morphological modification in Coleoptera.
{"title":"When a key innovation becomes redundant: Patterns, drivers and consequences of elytral reduction in Coleoptera","authors":"Jakub Goczał, Rolf G. Beutel, Matthew L. Gimmel, Robin Kundrata","doi":"10.1111/syen.12617","DOIUrl":"10.1111/syen.12617","url":null,"abstract":"<p>The transformation of the fore wings into strongly sclerotized protective covers (elytra) is considered a fundamental evolutionary innovation of the megadiverse order Coleoptera. Surprisingly, these multifunctional structures have been reduced in many distantly related groups of beetles. Patterns, drivers and the evolutionary implications of this modification have never been comprehensively discussed. In the present study, we surveyed the entire order Coleoptera to analyse the patterns of elytral shortening and loss, with a special focus on prevalence, forms, degree of reduction and the functional background of this significant deviation from the coleopteran ground plan. Our analysis revealed that about 20% of all extant species (roughly 88,000 out of 442,275 spp.), distributed across all four suborders, have shortened or even absent elytra. The elytral loss was more frequent within the polyphagan series Elateriformia and Staphyliniformia. Moreover, we found that elytral reduction has independently occurred multiple times in the evolutionary history of Coleoptera and that it has been driven by a wide array of selective drivers. One of the main drivers is the improved flexibility of the uncovered abdomen and the correlated increased manoeuvrability in narrow spaces, as well as the option of using the flexible abdomen as a steering organ or to facilitate mating. Another common driver is mimicry, where exposed metathoracic wings potentially improve the overall similarity to hymenopteran models. Exposure of the abdomen can facilitate the targeted release of defensive abdominal gland secretions and was most likely a crucial step towards establishing relations with social insects enhanced by chemical communication. In the Elateriformia, and rarely in other lineages, elytral loss is a consequence of paedomorphosis, related to a specific resource-allocation strategy. In many groups of beetles with reduced elytra, alternative defensive strategies can be found. This includes, for instance, aposematic coloration, chemical defence, mimicry or bioluminescence. Direct drivers of elytral loss in many groups remain unclear, and more studies are needed to understand the evolutionary background and implications of this significant morphological modification in Coleoptera.</p>","PeriodicalId":22126,"journal":{"name":"Systematic Entomology","volume":"49 2","pages":"193-220"},"PeriodicalIF":4.8,"publicationDate":"2023-12-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/syen.12617","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138569694","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Camiel Doorenweerd, Michael San Jose, Scott Geib, Norman Barr, Daniel Rubinoff
The Oriental fruit fly Bactrocera dorsalis (Hendel), a global pest that can decimate regional fruit industries and elicit international quarantines, has been the subject of considerable taxonomic confusion. Previous phylogenetic work revealed that B. dorsalis is part of a monophyletic clade containing 12 species. We present restriction site-associated DNA sequencing (RAD-seq) genomic data for 2,292 specimens, which unequivocally supports the delimitation of two new species, here described as Bactrocera borneoensissp. n. Doorenweerd & San Jose and B. incognitasp. n. Doorenweerd & San Jose. We additionally obtained 1,985 Cytochrome C oxidase I (COI) sequences for a subset of the specimens to see which species can be diagnosed with this mtDNA marker and conclude that B. dorsalis, B. incognita, B. carambolae Drew & Hancock, B. raiensis Drew & Hancock, B. occipitalis (Bezzi) and B. kandiensis Drew & Hancock cannot be identified reliably using COI due to introgression—but the newly described species B. borneoensis can be identified using COI. The supposed innocuous species B. raiensis distribution is underestimated in Asia and Africa. Bactrocera kandiensis COI genotypes occur in African flies, but RAD-seq data confirm that these are B. dorsalis with introgressed B. kandiensis COI. The phylogenomic dataset brings new light to the extent of the B. dorsalis s.l. clade and the morphological and molecular confusion based on COI. This will have ramifications for ecological data—including host and distribution ranges—associated with B. dorsalis s.l. clade species, pest identification protocols and our understanding of the economic importance of the various species in the clade.
东方果蝇背小实蝇(Hendel)是一种全球性害虫,可以摧毁地区水果产业并引发国际隔离,一直是相当大的分类混乱的主题。以前的系统发育工作表明,背孢芽孢杆菌是包含12种的单系分支的一部分。我们提供了2292个标本的限制性内切位点相关DNA测序(RAD-seq)基因组数据,明确支持两个新物种的划分,这里描述为小实蝇(Bactrocera borneensis sp. n. Doorenweerd &圣何塞和B. incognita sp. n. Doorenweerd &圣何塞。我们还获得了1985个细胞色素C氧化酶I (COI)序列,以确定哪些物种可以被诊断为这种mtDNA标记,并得出结论:B. dorsalis, B. incognita, B. carambolae Drew &汉考克,B. raiensis Drew &;汉考克,B. occipitalis (Bezzi)和B. kandiensis Drew &由于基因渐渗,不能用COI可靠地鉴定汉考克,但新描述的B. borneoensis可以用COI鉴定。在亚洲和非洲,被认为是无害物种的白桦的分布被低估了。非洲蝇中存在坎地小实蝇COI基因型,但ad -seq数据证实,这些是带有坎地小实蝇COI基因渐入的背小实蝇。系统基因组学数据的建立使我们对dorsalis s.l的进化分支的范围和基于COI的形态和分子混淆有了新的认识。这将对生态数据产生影响,包括寄主和分布范围,与背salis s.l分支物种,害虫鉴定协议和我们对该分支中各种物种的经济重要性的理解。
{"title":"Genomic data reveal new species and the limits of mtDNA barcode diagnostics to contain a global pest species complex (Diptera: Tephritidae: Dacinae)","authors":"Camiel Doorenweerd, Michael San Jose, Scott Geib, Norman Barr, Daniel Rubinoff","doi":"10.1111/syen.12616","DOIUrl":"10.1111/syen.12616","url":null,"abstract":"<p>The Oriental fruit fly <i>Bactrocera dorsalis</i> (Hendel), a global pest that can decimate regional fruit industries and elicit international quarantines, has been the subject of considerable taxonomic confusion. Previous phylogenetic work revealed that <i>B. dorsalis</i> is part of a monophyletic clade containing 12 species. We present restriction site-associated DNA sequencing (RAD-seq) genomic data for 2,292 specimens, which unequivocally supports the delimitation of two new species, here described as <i>Bactrocera borneoensis</i> <b>sp. n.</b> Doorenweerd & San Jose and <i>B. incognita</i> <b>sp. n.</b> Doorenweerd & San Jose. We additionally obtained 1,985 Cytochrome C oxidase I (COI) sequences for a subset of the specimens to see which species can be diagnosed with this mtDNA marker and conclude that <i>B. dorsalis</i>, <i>B. incognita</i>, <i>B. carambolae</i> Drew & Hancock, <i>B. raiensis</i> Drew & Hancock, <i>B. occipitalis</i> (Bezzi) and <i>B. kandiensis</i> Drew & Hancock cannot be identified reliably using COI due to introgression—but the newly described species <i>B. borneoensis</i> can be identified using COI. The supposed innocuous species <i>B. raiensis</i> distribution is underestimated in Asia and Africa. <i>Bactrocera kandiensis</i> COI genotypes occur in African flies, but RAD-seq data confirm that these are <i>B. dorsalis</i> with introgressed <i>B. kandiensis</i> COI. The phylogenomic dataset brings new light to the extent of the <i>B. dorsalis s.l.</i> clade and the morphological and molecular confusion based on COI. This will have ramifications for ecological data—including host and distribution ranges—associated with <i>B. dorsalis s.l.</i> clade species, pest identification protocols and our understanding of the economic importance of the various species in the clade.</p>","PeriodicalId":22126,"journal":{"name":"Systematic Entomology","volume":"49 2","pages":"279-293"},"PeriodicalIF":4.8,"publicationDate":"2023-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"138537986","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}