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Phylogenomic approach to integrative taxonomy resolves a century-old taxonomic puzzle and the evolutionary history of the Acromyrmex octospinosus species complex 综合分类学的系统基因组学方法解决了一个世纪以来的分类学难题和Acromyrmex octospinosus物种复合体的进化史
IF 4.9 1区 农林科学 Q1 ENTOMOLOGY Pub Date : 2024-12-27 DOI: 10.1111/syen.12665
Daniela Mera-Rodríguez, Hermógenes Fernández-Marín, Christian Rabeling

Accurately delimiting species boundaries is essential for understanding biodiversity. Here, we assessed the taxonomy of the leaf-cutting ants in the Acromyrmex octospinosus (Reich) species complex using an integrative approach incorporating morphological, population genetic, phylogenetic and biogeographical data. We sampled populations across the biogeographic distribution of the species complex and reconstructed their evolutionary relationships using ultraconserved elements (UCEs) as molecular markers. We evaluated traditional morphological characters used to distinguish putative taxa and performed species delimitation analyses to investigate divergence between evolutionary lineages. Our results support the hypothesis that the A. octospinosus species complex consists of two species: the widely distributed and polymorphic species A. octospinosus and its inquiline social parasite A. insinuator Schultz et al. We consider A. echinatior (Forel) syn. nov. and A. volcanus Wheeler syn. nov. as well as the subspecies A. octospinosus cubanus Wheeler syn. nov., A. octospinosus ekchuah Wheeler syn. nov. and A. octospinosus inti Wheeler syn. nov. as junior synonyms of A. octospinosus. We also investigated the biogeographic history of the species complex and the evolutionary origin of the social parasite A. insinuator. We inferred that A. octospinosus originated during the late Miocene approximately 6.9 Ma ago in the Neotropical rainforest. Acromyrmex insinuator shared a common ancestor with A. octospinosus approximately 3.4 Ma ago, with a crown-group age of approximately 0.9 Ma. Our phylogeny supports the hypothesis that the inquiline social parasite speciated via the intra-specific route of social parasite evolution in direct sympatry from its host. Our findings reshape our understanding of the A. octospinosus species complex and provide a foundation for future studies of Acromyrmex leaf-cutting ants.

准确划分物种边界对于理解生物多样性至关重要。本文采用形态学、种群遗传、系统发育和生物地理数据相结合的方法,对Acromyrmex octospinosus (Reich)种复合体中的切叶蚁进行了分类研究。我们在物种复合体的生物地理分布中采样种群,并使用超保守元件(UCEs)作为分子标记重建它们的进化关系。我们评估了用来区分推定分类群的传统形态特征,并进行了物种划分分析,以调查进化谱系之间的分歧。我们的研究结果支持了章鱼棘猴物种复合体由两个物种组成的假设:广泛分布和多态的章鱼棘猴物种和它的群居寄生物insinator。我们认为A. echinatior (Forel) syn. 11和A. volcanus Wheeler syn. 11以及A. octopspinosus cubanus Wheeler syn. 11、A. octopspinosus ekchuah Wheeler syn. 11和A. octopspinosus inti Wheeler syn. 11是A. octopspinosus的初级同义词。我们还研究了该物种群的生物地理历史和群居寄生虫的进化起源。我们推测,在中新世晚期,大约在6.9 Ma以前的新热带雨林中,有一种叫A. octospinosus的动物。Acromyrmex insinator与a. octospinosus的共同祖先约为3.4 Ma,冠群年龄约为0.9 Ma。我们的系统发育支持了这样一种假设,即群居寄生虫是通过与宿主直接同属的群居寄生虫进化的种内途径形成的。这些发现重塑了我们对a . octospinosus物种复合体的认识,并为今后对Acromyrmex切叶蚁的研究提供了基础。
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引用次数: 0
Origin of the only myrmecomorphic stink bug, Pentamyrmex spinosus (Hemiptera: Pentatomidae), in the radiation era of ants (Hymenoptera: Formicidae) 唯一一种半翅目蝽科(Pentamyrmex spinosus)在蚂蚁(膜翅目:蚁科)辐射时代的起源
IF 4.9 1区 农林科学 Q1 ENTOMOLOGY Pub Date : 2024-12-23 DOI: 10.1111/syen.12664
Jiu-Yang Luo, Yan-Zhuo Wu, Petr Kment, Adriana T. Salomão, Claas Damken, Yan-Hui Wang, Qiang Xie

Myrmecomorphy is the most common type of Batesian mimicry in arthropods. In the true bugs (Insecta: Hemiptera: Heteroptera), myrmecomorphy has been recorded in at least seven superfamilies, but not among the stink bugs (Pentatomoidea) until 2014. The only known species that exhibits a high degree of myrmecomorphy during both the adult and nymphal stages within this group, Pentamyrmex spinosus, was reported based on a single specimen, yet little was known beyond its morphological description. In this study, the biology of this species is reported as living in bamboo (Poaceae: Bambusoideae), in close proximity with a highly similar ant species, Polyrhachis dives (Hymenoptera: Formicidae). Further, the phylogenetic position and the origin time of this stink bug species were inferred in the context of Pentatomoidea. The dated phylogeny indicates that Pentamyrmex spinosus is the sister group of Phyllocephalinae, a specialized grass-feeding subfamily in Pentatomidae, and diverged about 42.7 Ma (52.6–33.2 Ma), roughly synchronous with the radiation of the crown group of Polyrhachis ants (42.0–33.0 Ma) and slightly after the early radiation of bamboos (66.9–24.9 Ma). Our results suggest that the origin of this myrmecomorphic stink bug was probably driven by the rapid diversification of spiny ants and bamboo. In addition, our results also provide a reference framework for the phylogenetic and taxonomic systems of Pentatomoidea and Pentatomidae.

拟态是节肢动物中最常见的贝氏拟态。在真正的臭虫(昆虫纲:半翅目:异翅目)中,至少有7个超科记录了蚁形,但直到2014年才在臭虫(五蝽总科)中发现。在这一群体中,唯一已知的在成虫和若虫阶段都表现出高度雌雄同构的物种是Pentamyrmex spinosus,这是基于单个标本的报道,但除了形态描述之外,对其知之甚少。在本研究中,该物种生活在竹科(竹总科)中,与一种高度相似的蚁种polyrhachhis dives(膜翅目:蚁科)生活在一起。此外,在五元总纲的背景下推测了该臭虫种的系统发育位置和起源时间。系统发育年代表明,Pentamyrmex spinosus是Pentatomidae中一个特殊的食草亚科Phyllocephalinae的姊妹类群,其分化时间约为42.7 Ma (52.6 ~ 33.2 Ma),与Polyrhachis蚁冠类群的辐射时间(42.0 ~ 33.0 Ma)大致同步,稍晚于竹类的早期辐射时间(69.9 ~ 24.9 Ma)。我们的研究结果表明,这种异胚性臭虫的起源可能是由刺蚁和竹子的快速多样化驱动的。此外,我们的研究结果也为五子科和五子科的系统发育和分类系统提供了参考框架。
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引用次数: 0
Gastritis over Gastrisus Sharp (Coleoptera: Staphylinidae: Xanthopygina): Resolving a major taxonomic impediment with phylogenomics 尖胃虫引起的胃炎(鞘翅目:葡萄球菌科:黄翅虫):用系统基因组学解决一个主要的分类障碍
IF 4.9 1区 农林科学 Q1 ENTOMOLOGY Pub Date : 2024-12-11 DOI: 10.1111/syen.12662
Adam J. Brunke, Stylianos Chatzimanolis

With 334 species, the subtribe Xanthopygina forms a diverse and ecologically dominant component of the Neotropical beetle fauna, ranging from the southern United States south to Argentina. Species can be abundant in a variety of microhabitats and are frequently encountered in tropical forests. Although a number of morphologically distinct genera are now well defined and identifiable, the subtribe still suffers from several poorly defined genera with relatively generalized morphology. The worst of these is the genus Gastrisus Sharp, which has never had a morphological definition per se and has, over time, accumulated many morphologically disparate species. This nebulous concept of Gastrisus has further made it difficult to generically assign and describe new species. Here we assembled a phylogenomic dataset using anchored hybrid enrichment across a broad sample of Xanthopygina, including nearly all described genera, a representation of morphological variation within Gastrisus and a number of undescribed taxa we were unable to assign to a genus. Both maximum likelihood and coalescent analyses converged on a well resolved and stable topology for the subtribe, which will serve as a critical framework for continued taxonomic progress in Xanthopygina. Nine major lineages were identified, most congruent with previous work. The limits of Gastrisus were successfully identified, and the monophyletic core of the genus was recovered as sister to a redefined Nausicotus Sharp, which included Torobus syn. n. Several large species of Gastrisus were resolved as a clade of the Xanthopygus group and are here placed in Drepanagrios gen. n. An additional six new genera were discovered but will be described and treated in detail in future papers. In addition to Gastrisus, Phanolinus Sharp, Xenopygus Bernhauer, Phanolinopsis Scheerpeltz and Ocyolinus Sharp were recovered as paraphyletic, resulting in Elecatopselaphus syn. n. (=Phanolinus), the re-validation of Leptodiastemus Bernhauer stat. ressur. and the redefinition of Xenopygus, Phanolinopsis and Ocyolinus. We propose Phanolinus scheerpeltzi nom. n. as a replacement name for Phanolinus peruvianus (Scheerpeltz 1972, nec Bernhauer 1917) (previously Elecatopselaphus).

Xanthopygina亚族共有334种,构成了从美国南部到阿根廷的新热带甲虫动物群中一个多样化和生态优势的组成部分。物种可以在各种微生境中丰富,并且经常在热带森林中遇到。虽然许多形态上不同的属现在已经被很好地定义和识别,但这个亚部落仍然有几个形态相对普遍的定义不清的属。其中最糟糕的是Gastrisus Sharp属,它本身从未有过形态学定义,而且随着时间的推移,积累了许多形态学上完全不同的物种。这一模糊的概念进一步使一般分配和描述新物种变得困难。在这里,我们使用锚定杂交富集在广泛的Xanthopygina样本中组装了一个系统基因组数据集,包括几乎所有已描述的属,Gastrisus内形态变异的代表以及一些我们无法分配给属的未描述分类群。最大似然分析和聚结分析都得到了一个稳定的拓扑结构,这将为黄杉属分类学的进一步发展提供一个重要的框架。九个主要血统被确定,与以前的工作最一致。成功地鉴定了Gastrisus的范围,并恢复了该属的单系核心,作为一个重新定义的Nausicotus Sharp的姊妹,其中包括Torobus synn。Gastrisus的几个大种被确定为Xanthopygus组的一个分支,并在这里被归入Drepanagrios gen. n。另外发现了6个新属,但将在未来的论文中详细描述和处理。除Gastrisus外,还将Phanolinus Sharp、Xenopygus Bernhauer、Phanolinopsis Scheerpeltz和Ocyolinus Sharp作为副食回收,得到Elecatopselaphus synn . (=Phanolinus),重新验证了Leptodiastemus Bernhauer stat. ressur。Xenopygus、Phanolinopsis和Ocyolinus的重新定义。我们提出Phanolinus scheerpeltzi nomn . n作为Phanolinus peruvianus (Scheerpeltz 1972, nec Bernhauer 1917)(以前的Elecatopselaphus)的替代名称。
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引用次数: 0
Phylogeny and classification of Cixiidae (Hemiptera, Fulgoromorpha): A new evolutionary scenario for the most diverse planthopper family 飞虱科的系统发育与分类(半翅目,飞虱科):最多样化飞虱科的一种新的进化情景
IF 4.9 1区 农林科学 Q1 ENTOMOLOGY Pub Date : 2024-12-11 DOI: 10.1111/syen.12663
Yang Luo, Manon Bucher, Thierry Bourgoin, Birgit Löcker, Ji-Nian Feng

The Cixiidae represent the most diverse family within Hemiptera Fulgoromorpha, accounting for nearly 20% of the described species. A molecular phylogenetic analysis of 147 taxa reveals a new evolutionary scenario for the family, identifying four major lineages: borystheninian (restricted to the Borysthenini), oecleinian and pentastirinian, grouped in one clade, sister to the cixiinian one. In the oecleinian lineage, the Oecleini are paraphyletic, including the Bothriocerini. Three groups are identified in the pentastirinian lineage: the Hyalesthes+, Pentastiridius+ and Oliarus+ clades. Within the cixiinian lineage, as traditionally recognised, the Cixiini tribe is polyphyletic, involving a basally separated Achaemenes clade, a newly described Chidaeini trib. nov., and the ‘true Cixiini’ clade, which itself remains paraphyletic, including the Semonini. The Andini tribe appears paraphyletic, including the Brixiini, and the position of the Gelastocephalini is yet to be confirmed. Despite its significance, the sampling remains incomplete, hindering, in our opinion, the formal taxonomic recognition of these lineages with formal ranks for a new classification of the Cixiidae. Fossil-calibrated tree analysis indicates that Cixiidae originated in Lower Jurassic, approximately 181 million years ago. The four identified main lineages diverged during the Lower Jurassic in some 12 million years only, 155 million years ago. All currently recognised tribes and new major clades revealed with this study were present as early as the mid-Cretaceous, around 100 million years ago; however, the Bennini tribe and the ‘true Cixiini’ clade emerged later, some 75 million years ago.

刺蝇科是半翅目刺蝇科中种类最丰富的科,占所描述物种的近20%。对147个分类群的分子系统发育分析揭示了该科的一个新的进化情景,确定了四个主要谱系:borystheninian(仅限于Borysthenini), oecleinian和pentastirinian,归为一个分支,与慈夕系的姐妹。在欧克莱尼血统中,欧克莱尼人是泛葡萄的,包括Bothriocerini。在Pentastiridius谱系中确定了三个类群:Hyalesthes+, Pentastiridius+和Oliarus+分支。在慈禧谱系中,传统上认为慈禧部落是多种的,包括一个基本分离的阿契美尼分支,一个新描述的慈禧部落。11月11日,以及“真正的西西尼”分支,它本身仍然是paraphyletic,包括Semonini。包括布里希尼人在内的安蒂尼人似乎是一种过敏性部落,而Gelastocephalini的位置还有待确认。尽管具有重要意义,但采样仍然不完整,我们认为,这阻碍了对这些具有正式等级的谱系的正式分类识别,从而阻碍了对慈禧科的新分类。化石校正树分析表明,慈溪科起源于下侏罗纪,大约1.81亿年前。这四个已确定的主要谱系仅在1.55亿年前的1200万年左右的下侏罗纪时期就出现了分化。所有目前已知的部落和这项研究揭示的新的主要分支早在白垩纪中期就存在了,大约1亿年前;然而,贝尼尼部落和“真正的慈禧尼”分支出现得较晚,大约在7500万年前。
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引用次数: 0
Clarifying the phylogeny and systematics of the recalcitrant tribe Leptocircini (Lepidoptera: Papilionidae) with whole-genome data 用全基因组数据阐明顽固性纤毛虫族(鳞翅目:凤蝶科)的系统发育和系统学
IF 4.9 1区 农林科学 Q1 ENTOMOLOGY Pub Date : 2024-11-28 DOI: 10.1111/syen.12661
Eliette L. Reboud, Benoit Nabholz, Emmanuelle Chevalier, Bérénice J. Lafon, Marie-ka Tilak, Carlos G. C. Mielke, Adam M. Cotton, Fabien L. Condamine

Leptocircini is a dazzling tribe of Papilionidae, including dragontails, kite swallowtails and swordtails. This tribe is widely distributed, notably throughout the tropics of Africa, Southeast Asia and the Americas, making it a fascinating model in evolutionary biology. However, despite accounting for 25% of the global swallowtail butterfly diversity, Leptocircini have been surprisingly neglected in phylogenetic analyses. This has left unanswered questions about their taxonomy and systematics. Here, we present a new taxonomic working list for Leptocircini, featuring 162 valid species. Using a combination of long and short reads data, we produced five new reference genomes, and we generated highly covered and scaffolded whole genomes for 148 individuals to infer densely sampled phylogenetic hypotheses. Based on mitochondrial or thousands of nuclear genes and multiple phylogenetic approaches, a robust phylogenomic tree is recovered, representing approximately 90% of the known species, which allowed examination of several key phylogenetic hypotheses. We found the monotypic genus Protographium Munroe to be sister of genus Graphium Scopoli. Additionally, we found that subgenus Paranticopsis Wood-Mason and de Nicéville is nested within subgenus Pathysa Reakirt, which we found is likely attributed to an ancient gene flow. We therefore synonymize Paranticopsis, syn.rest. To keep a consistent approach to subgeneric classification across the tribe and family, we devided genus Eurytides Hübner into three subgenera: Mimoides Brown, Eurytides sensu stricto and Protesilaus Swainson. This led to several taxonomic implications: Asiographium Möhn, syn.rest., Boreographium Grishin, syn.n., Hyalaus Grishin, syn.n. and Neographium Möhn, syn.n. are synonymized with Eurytides (Mimoides); and Eurygraphium Möhn, syn.rest. is synonymized with Eurytides (Eurytides). Our analyses finally raised concerns about potential taxonomic inflation in two species-groups within Graphium and Eurytides (Protesilaus). This study illuminates the clade's evolutionary history and paves the way for further research on this diverse group of charismatic butterflies.

纤毛虫是凤蝶科的一个令人眼花缭乱的部落,包括龙尾、鸢燕尾和剑尾。这个部落分布广泛,特别是在非洲、东南亚和美洲的热带地区,使其成为进化生物学中一个迷人的模型。然而,尽管占全球燕尾蝴蝶多样性的25%,但令人惊讶的是,钩端螺旋体在系统发育分析中被忽略了。这给它们的分类学和系统学留下了未解之谜。在此,我们提出了一个新的钩端螺旋体分类工作表,包含162个有效种。结合长、短reads数据,我们产生了5个新的参考基因组,并为148个个体生成了高度覆盖和支架的全基因组,以推断密集采样的系统发育假设。基于线粒体或数千个核基因和多种系统发育方法,恢复了一个强大的系统发育树,代表了大约90%的已知物种,这允许检查几个关键的系统发育假设。我们发现单型属Protographium Munroe是Graphium Scopoli属的姊妹属。此外,我们还发现Paranticopsis Wood-Mason亚属和de nic维尔亚属嵌套在Pathysa Reakirt亚属中,我们发现这可能归因于一个古老的基因流。因此,我们将particopsis同义词为synrest。为了保持整个部落和科亚属分类的一致性,我们将Eurytides h bner属划分为三个亚属:Mimoides Brown, Eurytides sensu stricto和Protesilaus Swainson。这导致了几个分类学意义:Asiographium Möhn, synst .rest。;;;;;;Hyalaus Grishin,同义。和Neographium Möhn, synn。同义与Eurytides (Mimoides);和eurygrapium Möhn, synrest。是欧律提斯(Eurytides)的同义词。我们的分析最终提出了对grapum和Eurytides (proteesilaus)中两个种群潜在的分类膨胀的担忧。这项研究阐明了这一分支的进化史,并为进一步研究这一具有魅力的多样化蝴蝶群体铺平了道路。
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引用次数: 0
Cutting the sap: First molecular phylogeny of twig-girdler longhorn beetles (Coleoptera: Cerambycidae: Lamiinae: Onciderini) suggests shifts in host plant attack behaviours contributed to morphological evolution 切断汁液:长角甲虫的第一个分子系统发育(鞘翅目:天牛科:纹叶虫科:牛角虫)表明寄主植物攻击行为的改变有助于形态进化
IF 4.9 1区 农林科学 Q1 ENTOMOLOGY Pub Date : 2024-11-19 DOI: 10.1111/syen.12660
Diego de S. Souza, Rowan L. K. French, José O. Silva Júnior, Eugenio H. Nearns, Luciane Marinoni, Ian P. Swift, Kelly B. Miller, Felix A. H. Sperling, Marcela L. Monné

Understanding how novel adaptive traits arise, evolve and impact other aspects of an organism's phenotype is a foundational question in evolutionary biology. We explore this by focusing on Onciderini (Coleoptera: Cerambycidae: Lamiinae), a tribe of longhorn beetles commonly referred to as twig girdlers because the females of some species girdle live trees to deposit their eggs. We reconstructed the first time-calibrated phylogeny of the Onciderini, based on three genetic markers (cytochrome c oxidase subunit 1 ‘cox1’, Wingless ‘Wg’ and carbamoyl-phosphate synthase domain of the CAD locus ‘CPS’), and used morphometric data, employing multiple models of trait evolution and phylogenetic regressions, to assess whether girdling behaviour predicts head size or head size sexual dimorphism. Our results indicate that onciderines originated c. 49 million years ago ‘Ma’ (95% highest posterior densities ‘HPD’: 44.1–54.57 Ma) and consist of two major lineages, which we formalize as subtribes Hypsiomatina and Onciderina. Additionally, our analyses revealed several taxonomic inconsistencies within the tribe, which we rectify by proposing new synonymies, including Jamesia Jekel as a synonym of Hypselomus Perty, Cipriscola Dillon & Dillon of Hypsioma Audinet-Serville and Psyllotoxus Thomson and Taricanus Thomson as a synonym of Oncideres Lacordaire, and a new combination for Periergates kenjii Nearns & Swift as Oncideres kenjii (Nearns & Swift) comb. nov. Using this new phylogenetic framework, we identified five independent unidirectional origins of girdling behaviour within the tribe. Overall, our results suggest that girdling influences head size evolution in Onciderini, as it is associated with an increase in both male and female head size of girdler species. Despite this, girdling and non-girdling lineages do not consistently differ in head size sexual dimorphism. This study refines the classification of Onciderini and marks a significant step in understanding the evolutionary dynamics shaping the diversity of twig-girdler beetles, a group with notable ecological and economic importance.

了解新的适应性状是如何产生、进化和影响生物体表型的其他方面的,是进化生物学的一个基础问题。我们的研究重点是长角甲虫(鞘翅目:天牛科:天牛科),这是一种长角甲虫,通常被称为树枝腰带,因为一些物种的雌性会把活树围起来产卵。我们基于三个遗传标记(细胞色素c氧化酶亚基1 ‘ cox1 ‘,无翼’ Wg ’和CAD位点‘ CPS ’的氨甲酰磷酸合成酶结构域)重建了石首鱼的首次时间校准系统发育,并使用形态计量学数据,采用多种性状进化和系统发育回归模型,评估围带行为是否预测头部大小或头部大小的性别二态性。我们的研究结果表明,锥虫类起源于约4900万年前的“Ma”(95%最高后验密度“HPD”:44.1-54.57 Ma),并由两个主要谱系组成,我们将其正式定义为hypomatina亚部落和onciiderina亚部落。此外,我们的分析揭示了部落内部的几种分类不一致,我们通过提出新的同义词来纠正这些不一致,包括Jamesia Jekel作为Hypselomus Perty的同义词,Cipriscola Dillon &;狄龙(Hypsioma Audinet-Serville)和汤姆逊(Psyllotoxus Thomson)和汤姆逊(Taricanus Thomson)的同义名,以及近生门(Periergates kenjii Nearns & &;《斯威夫特》(斯威夫特饰)斯威夫特)梳子。利用这个新的系统发育框架,我们确定了部落中绑带行为的五个独立的单向起源。总体而言,我们的研究结果表明,环抱影响了圆孔虫头部大小的进化,因为它与环抱物种雄性和雌性头部大小的增加有关。尽管如此,束带和非束带血统在头部大小和两性二态性上并不一致。这一研究完善了银针甲虫的分类,标志着我们在了解具有重要生态和经济意义的小束甲虫的进化动力学方面迈出了重要的一步。
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引用次数: 0
Ultraconserved element (UCE) phylogenomics illuminates the evolutionary history and biogeography of Dorymyrmex pyramid ants 超保守元件(UCE)系统基因组学揭示了Dorymyrmex金字塔蚁的进化历史和生物地理
IF 4.9 1区 农林科学 Q1 ENTOMOLOGY Pub Date : 2024-11-18 DOI: 10.1111/syen.12658
Jill T. Oberski

Latitudinal diversity gradients are one of the most widely discussed patterns in global biogeography, generally in the context of high diversity in tropical regions. In contrast, ‘amphitropical’ or ‘inverse’ distributions, once thought to be unusual, are increasingly recognized as common among many hymenopteran insects. One such group is the ant genus Dorymyrmex, which specializes in arid habitats throughout the Americas. To evaluate when and how Dorymyrmex acquired its present-day distribution, I sequenced partial genomes of 167 Dorymyrmex representing 69 species by targeting ultraconserved elements (UCEs). A matrix of 870 genetic loci was used to infer maximum likelihood and Bayesian phylogenies, estimate divergence dates and reconstruct hypothesized ancestral areas. These new analyses reveal that Dorymyrmex comprises four species groups, the D. flavescens, tener, wolffhuegeli, and pyramicus groups. The D. pyramicus group likely dispersed from South America to North America only once, via Central America. Like many Hymenoptera, this dispersal occurred before the traditional closure date of the Isthmus of Panama, corroborating and extending the results of previous studies. Finally, I discuss life history strategies of Dorymyrmex that may have contributed to the geographic and genetic radiation of the D. pyramicus group, detail significant insights into Dorymyrmex morphology and classical taxonomy with new comparative illustrations, and provide recommendations for future work.

纬度多样性梯度是全球生物地理学中讨论最广泛的格局之一,通常是在热带地区高度多样性的背景下。相反,“两性”或“反向”分布,曾经被认为是不寻常的,在许多膜翅目昆虫中越来越被认为是常见的。其中一个群体是蚂蚁属Dorymyrmex,它们专门生活在整个美洲的干旱栖息地。为了评估Dorymyrmex何时以及如何获得其今天的分布,我通过靶向超保守元件(UCEs)对69个物种的167个Dorymyrmex进行了部分基因组测序。利用870个遗传位点的矩阵来推断最大似然和贝叶斯系统发育,估计分化日期并重建假设的祖先区域。这些新的分析结果表明,该物种包括4个类群,即D. flavescens、tener、wolffhuegeli和pyramicus类群。金字塔锥虫群很可能只经过中美洲一次从南美分散到北美。像许多膜翅目昆虫一样,这种扩散发生在巴拿马地峡传统的关闭日期之前,证实并扩展了以前的研究结果。最后,讨论了可能对d.c ramicus类群的地理和遗传辐射有贡献的Dorymyrmex的生活史策略,详细介绍了关于Dorymyrmex形态学和经典分类学的重要见解,并提供了新的比较插图,并为未来的工作提出了建议。
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引用次数: 0
Phylogenomic insights and geographic distribution of the New World genus Amphibolips Reinhard (Hymenoptera: Cynipidae, Cynipini) using ultraconserved elements 基于超保守元件的新世界凤梨属(Amphibolips Reinhard)系统基因组研究及地理分布(膜翅目:凤梨科,凤梨科
IF 4.9 1区 农林科学 Q1 ENTOMOLOGY Pub Date : 2024-11-07 DOI: 10.1111/syen.12659
Dohuglas Eliseo Castillejos-Lemus, Jose-Luis Nieves-Aldrey, Yuanmeng Miles Zhang, James A. Nicholls, Enrique Medianero, Alejandra Rougon-Cardoso, Graham N. Stone, Ken Oyama

In recent years, new wasp species and genera of Cynipidae have been described, and their species delimitation and evolutionary relationships have been supported using molecular markers. However, few studies have included comprehensive and extensive sampling of specimens across the complete distribution of a single genus. In this study, we analysed the phylogenetic relationships of the genus Amphibolips throughout its range using ultraconserved elements (UCEs). We collected 520 adult wasps from 401 sites in various geographic locations, predominantly in Mexico, and used 78 wasps for UCE analysis. Our results demonstrate that Amphibolips forms a monophyletic clade. Amphibolips can be further subdivided into four genetically well-differentiated clades. Each clade had morphological traits that could be collectively characterised. Species delimitation using molecular sequencing highlights the taxonomic complexity involved in separating and assigning species using exclusively morphological criteria. This approach offers an opportunity to refine current morphological taxonomic criteria or propose new criteria to establish more accurate classifications. The rich diversity of host species and geographic regions in Mexico represents a biodiversity hotspot for Amphibolips. The number of undescribed species remains high. This study facilitates the determination of appropriate boundaries for putative new Amphibolips species.

近年来,新发现的蜂科新种和新属的种类划分和进化关系得到了分子标记的支持。然而,很少有研究包括在单个属的完整分布中进行全面和广泛的标本采样。在这项研究中,我们利用超保守元件(UCEs)分析了整个范围内两栖属的系统发育关系。我们从不同地理位置的401个地点(主要在墨西哥)收集了520只成年黄蜂,并使用78只黄蜂进行UCE分析。我们的研究结果表明,两栖动物形成了一个单系进化分支。两栖类可以进一步细分为四个遗传分化良好的分支。每个分支都有可以共同描述的形态特征。使用分子测序的物种划分突出了分类学的复杂性,涉及分离和分配物种仅使用形态学标准。这种方法提供了一个机会,以完善目前的形态分类标准或提出新的标准,以建立更准确的分类。墨西哥丰富的寄主物种和地理区域多样性是两栖类生物多样性的热点。未被描述的物种数量仍然很高。这项研究有助于确定假定的两栖新种的适当边界。
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引用次数: 0
Early colonization of New Caledonia by ultrasonic crickets from New Guinea (Orthoptera: Gryllidae: Eneopterinae): Historical biogeography and description of a new genus 来自新几内亚的超声波蟋蟀在新喀里多尼亚的早期殖民(直翅目:蟋蟀科:蟋蟀科):历史生物地理学和一个新属的描述
IF 4.9 1区 农林科学 Q1 ENTOMOLOGY Pub Date : 2024-10-31 DOI: 10.1111/syen.12656
Thomas Le Flanchec, Karen Salazar, Julien Malem, Juliette Vendanger, Eddy Poirier, Valentin Dutertre, Céline Bonillo, Pascaline Chifflet-Belle, Frédéric Legendre, Romain Nattier, Tony Robillard

New Caledonian crickets of the tribe Lebinthini are renowned for their high endemicity and their use of high-frequency calling songs. Although previous studies have found them to originate from New Guinea around 30 Ma, recent discoveries of new lineages of Lebinthini in New Caledonia and in Australia questioned this result. Here, we describe Kanakinthus koniambo Le Flanchec & Robillard gen. et sp.nov., a new genus and species endemic to New Caledonia. We also describe three new species of the endemic genus Agnothecous: A. anonymous Le Flanchec, Vendanger & Robillard sp.nov., A. borendyi Le Flanchec, Vendanger & Robillard sp.nov. and A. kwakwe Le Flanchec, Vendanger & Robillard sp.nov. We include these new taxa and the Australian Lebinthini in a molecular phylogeny of the subfamily Eneopterinae, estimate their divergence times and reconstruct their historical biogeography. Our results confirm the monophyly of the clade endemic to New Caledonia and its origin from a single colonization event from New Guinea, around 30 Ma, shortly after the archipelago completely re-emerged in its current configuration, 34 Ma. We also infer an independent colonization of Australia by the genus Julverninthus from New Guinea, around 25 Ma.

Lebinthini部落的新喀里多尼亚蟋蟀以其高地方性和使用高频鸣叫而闻名。尽管先前的研究发现它们起源于大约30年前的新几内亚,但最近在新喀里多尼亚和澳大利亚发现的Lebinthini新谱系质疑了这一结果。在这里,我们描述Kanakinthus koniambo Le Flanchec &;罗毕拉德将军等。新喀里多尼亚特有的一个新属和新种。我们还描述了特有属Agnothecous的三个新种:A. anonymous Le Flanchec, Vendanger &;Robillard sp.nov。, A.波伦迪·勒·弗兰切克,文登格尔&;Robillard sp.nov。和A. kwakwe Le Flanchec, Vendanger &;Robillard sp.nov。我们将这些新分类群与澳大利亚的Lebinthini归入蝶亚科的分子系统发育中,估计了它们的分化时间并重建了它们的历史生物地理。我们的研究结果证实了新喀里多尼亚特有进化枝的单系性,以及它起源于新几内亚的单一殖民事件,大约在30 Ma左右,在群岛完全以其目前的形态(34 Ma)重新出现后不久。我们还推断来自新几内亚的Julverninthus属在25 Ma左右独立殖民澳大利亚。
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引用次数: 0
Lacewing-specific Universal Single Copy Orthologs designed towards resolution of backbone phylogeny of Neuropterida 为解决神经翼目脊椎系统发育问题而设计的草蛉特异的通用单拷贝直同源
IF 4.9 1区 农林科学 Q1 ENTOMOLOGY Pub Date : 2024-10-29 DOI: 10.1111/syen.12657
Yan Lai, Shiyu Du, Hongyu Li, Yuchen Zheng, Adrian Ardila-Camacho, Ulrike Aspöck, Horst Aspöck, Ding Yang, Feng Zhang, Xingyue Liu

Universal Single Copy Orthologs (USCOs), as a set of markers of nearly universal single-copy genes, show a superiority in phylogenomic inference. Here, we developed a Benchmarking Universal Single Copy Orthologs (BUSCOs) dataset, neuropterida_odb10, tailored for Neuropterida, based on high-quality genome assemblies and transcriptome data, comprising 5438 BUSCOs. A range of 1524–5328 complete and single-copy USCOs could be captured from the genome assemblies and transcriptomes of 104 species of Neuropterida. The reconstruction of a higher-level phylogeny of Neuropterida based on a comprehensive sampling and refined genomic data in reference to neuropterida_odb10 validates the efficiency of this BUSCO dataset for phylogenomic inference. We recovered Psychopsidae as the sister group to Ithonidae, and corroborated the sister group relationship between Sisyridae and Nevrorthidae within Osmyloidea and the sister group relationship between Chrysopidae and Mantispoidea. Furthermore, our findings highlight that focusing on alignments with a higher presence of parsimony-informative sites, rather than on the total number of alignments, can diminish errors in gene tree estimation, a process notably vulnerable to error when using multispecies coalescent methods. The neuropterida_odb10 BUSCO reference dataset holds promise for phylogenetic studies at various hierarchical levels, as well as for comparative genomics and the exploration of species diversity within Neuropterida.

通用单拷贝同源物(Universal Single Copy Orthologs, USCOs)作为一组几乎通用的单拷贝基因标记,在系统基因组推断中具有优势。在这里,我们基于高质量的基因组组装和转录组数据,开发了一个为栉翼类量身定制的基准通用单拷贝同源物(BUSCOs)数据集neuropterida_odb10,包含5438个BUSCOs。从104种栉虫的基因组组装和转录组中捕获了1524 ~ 5328个完整的单拷贝USCOs。以neuropterida_odb10为参考,基于全面采样和精细化的基因组数据重建了一个更高层次的神经翼目系统发育,验证了BUSCO数据集在系统发育推断方面的有效性。我们恢复了精神蝗科作为蚁科的姐妹类群,并证实了在蚁科中,精神蝗科与蚁科之间存在姐妹类群关系,而蝶科与螳螂科之间存在姐妹类群关系。此外,我们的研究结果强调,关注具有较高简约性信息位点的比对比对,而不是关注比对比对的总数,可以减少基因树估计中的错误,这是一个在使用多物种聚结方法时特别容易出错的过程。neuropterida_odb10 BUSCO参考数据集有望用于不同层次的系统发育研究,以及比较基因组学和神经翼目物种多样性的探索。
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引用次数: 0
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Systematic Entomology
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