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Natural variation in the chickpea metabolome under drought stress 干旱胁迫下鹰嘴豆代谢组的自然变异
IF 13.8 1区 生物学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-10-16 DOI: 10.1111/pbi.14447
Palak Chaturvedi, Iro Pierides, Cristina López-Hidalgo, Vanika Garg, Shuang Zhang, Rutwik Barmukh, Anke Bellaire, Jiahang Li, Gert Bachmann, Luis Valledor, Rajeev K. Varshney, Arindam Ghatak, Wolfram Weckwerth
Chickpea is the world's fourth largest grown legume crop, which significantly contributes to food security by providing calories and dietary protein globally. However, the increased frequency of drought stress has significantly reduced chickpea production in recent years. Here, we have performed a field experiment with 36 diverse chickpea genotypes to evaluate grain yield, photosynthetic activities and molecular traits related to drought stress. For metabolomics analysis, leaf tissue was collected at three time points representing different pod-filling stages. We identified L-threonic acid, fructose and sugar alcohols involved in chickpea adaptive drought response within the mid-pod-filling stage. A stress susceptibility index for each genotype was calculated to identify tolerance capacity under drought, distributing the 36 genotypes into four categories from best to worst performance. To understand how biochemical mechanisms control different traits for genetic improvement, we performed a differential Jacobian analysis, which unveiled the interplay between various metabolic pathways across three time points, including higher flux towards inositol interconversions, glycolysis for high-performing genotypes, fumarate to malate conversion, and carbon and nitrogen metabolism perturbations. Metabolic GWAS (mGWAS) analysis uncovered gene candidates involved in glycolysis and MEP pathway corroborating with the differential biochemical Jacobian results. Accordingly, this proposed data analysis strategy bridges the gap from pure statistical association to causal biochemical relations by exploiting natural variation. Our study offers new perspectives on the genetic and metabolic understanding of drought tolerance-associated diversity in the chickpea metabolome and led to the identification of metabolic control points that can be also tested in other legume crops.
鹰嘴豆是世界第四大豆科作物,在全球范围内提供热量和膳食蛋白质,为粮食安全做出了重大贡献。然而,近年来干旱胁迫频率的增加大大降低了鹰嘴豆的产量。在此,我们对 36 种不同鹰嘴豆基因型进行了田间试验,以评估谷物产量、光合作用活性以及与干旱胁迫相关的分子性状。为了进行代谢组学分析,我们在代表不同结荚期的三个时间点收集了叶片组织。我们确定了 L-苏氨酸、果糖和糖醇在豆荚成熟中期参与鹰嘴豆适应性干旱响应。我们计算了每个基因型的胁迫易感性指数,以确定其在干旱下的耐受能力,并将 36 个基因型从最佳表现到最差表现分为四类。为了了解生化机制如何控制不同的性状以进行遗传改良,我们进行了差异雅各布分析,揭示了三个时间点上各种代谢途径之间的相互作用,包括肌醇相互转化的较高通量、高表现基因型的糖酵解、富马酸到苹果酸的转化以及碳和氮代谢扰动。代谢 GWAS(mGWAS)分析发现了参与糖酵解和 MEP 途径的候选基因,这与差异生化雅各布因子的结果相吻合。因此,这种拟议的数据分析策略通过利用自然变异,缩小了从纯统计关联到因果生化关系的差距。我们的研究为从遗传和代谢角度理解鹰嘴豆代谢组中与耐旱性相关的多样性提供了新的视角,并确定了代谢控制点,这些控制点也可在其他豆科作物中进行测试。
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引用次数: 0
Edited eukaryotic translation initiation factors confer resistance against maize lethal necrosis. 编辑的真核翻译起始因子赋予玉米致死坏死抗性
IF 13.8 1区 生物学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-10-15 DOI: 10.1111/pbi.14472
Zhengyu Wen,Fengzhong Lu,Mark Jung,Sabrina Humbert,Lisa Marshall,Craig Hastings,Emily Wu,Todd Jones,Mario Pacheco,Ivan Martinez,L M Suresh,Yoseph Beyene,Prasanna Boddupalli,Kevin Pixley,Kanwarpal S Dhugga
Maize lethal necrosis (MLN), which is caused by maize chlorotic mottle virus along with a potyvirus, has threatened the food security of smallholders in sub-Saharan Africa. Mutations in eukaryotic translation initiation factors (eIFs), which also facilitate virus genome translation, are known to confer variable resistance against viruses. Following phylogenetic analysis, we selected two eIF4E proteins from maize as the most likely candidates to facilitate MLN infection. A knockout (KO) of each of the corresponding genes in elite but MLN-susceptible maize lines conferred only partial protection. Our inability to knockout both the genes together suggested that at least one was required for survival. When we edited (ED) the eIF4E genes in Mini Maize, however, the plants with the eif4e1-KO became highly resistant, whereas those with the eif4e2-KO remained susceptible. Neither of the causal viruses could be detected in the MLN-inoculated eif4e1-KO plants. The eIF4E2 cDNA in Mini Maize lacked the entire 4th exon, causing a 22-amino acid in-frame deletion, which shortened the protein to 198 amino acids. When we introduced mutations in the 4th exon of the eIF4E2 gene in two elite, MLN-susceptible lines pre-edited for an eif4e1-KO, we obtained as strong resistance against MLN as in eif4e1-KO Mini Maize. The MLN-inoculated lines with eif4e1-KO/eIF4E2-exon-4ED performed as well as the uninoculated wild-type lines. We demonstrate that the C-terminal 38 amino acids of eIF4E2 are dispensable for normal plant growth but are required for the multiplication of MLN viruses. Our discovery has wide applications across plant species for developing virus-resistant varieties.
玉米致命坏死病(MLN)是由玉米萎黄斑驳病病毒(maize chlorotic mottle virus)和一种壶状病毒(potyvirus)引起的,它威胁着撒哈拉以南非洲地区小农的粮食安全。真核翻译起始因子(eIFs)也能促进病毒基因组的翻译,众所周知,eIFs 的突变能赋予病毒不同的抗性。经过系统发育分析,我们选择了玉米中的两种 eIF4E 蛋白作为最有可能促进 MLN 感染的候选蛋白。在精英但对 MLN 易感的玉米品系中敲除(KO)每个相应的基因,只能获得部分保护。我们无法同时敲除两个基因,这表明至少有一个基因是存活所必需的。然而,当我们编辑(ED)迷你玉米中的 eIF4E 基因时,eif4e1-KO 的植株变得高度抗病,而 eif4e2-KO 的植株仍然易感。在接种了 MLN 的 eif4e1-KO 植株中检测不到任何致病病毒。迷你玉米中的 eIF4E2 cDNA 缺乏整个第 4 外显子,造成 22 个氨基酸的框内缺失,使蛋白质缩短为 198 个氨基酸。当我们将 eIF4E2 基因第 4 外显子上的突变引入两个预编辑为 eif4e1-KO 的 MLN 易感精英品系时,我们获得了与 eif4e1-KO Mini 玉米一样强的抗 MLN 能力。接种了 eif4e1-KO/eIF4E2-exon-4ED 的 MLN 株系与未接种的野生型株系表现一样好。我们证明,eIF4E2 的 C 端 38 个氨基酸对植物的正常生长是不可或缺的,但对 MLN 病毒的繁殖却是必需的。我们的发现在开发抗病毒品种方面具有广泛的应用前景。
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引用次数: 0
An efficient CRISPR-Cas12a-mediated MicroRNA knockout strategy in plants 一种高效的 CRISPR-Cas12a 介导的植物 MicroRNA 基因敲除策略
IF 13.8 1区 生物学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-10-14 DOI: 10.1111/pbi.14484
Xuelian Zheng, Xu Tang, Yuechao Wu, Xiaoqin Zheng, Jianping Zhou, Qinqin Han, Yalan Tang, Xinxuan Fu, Jiao Deng, Yibo Wang, Danning Wang, Shuting Zhang, Tao Zhang, Yiping Qi, Yong Zhang
In recent years, the CRISPR-Cas9 nuclease has been used to knock out MicroRNA (miRNA) genes in plants, greatly promoting the study of miRNA function. However, due to its propensity for generating small insertions and deletions, Cas9 is not well-suited for achieving a complete knockout of miRNA genes. By contrast, CRISPR-Cas12a nuclease generates larger deletions, which could significantly disrupt the secondary structure of pre-miRNA and prevent the production of mature miRNAs. Through the case study of OsMIR390 in rice, we confirmed that Cas12a is a more efficient tool than Cas9 in generating knockout mutants of a miRNA gene. To further demonstrate CRISPR-Cas12a-mediated knockout of miRNA genes in rice, we targeted nine OsMIRNA genes that have different spaciotemporal expression and have not been previously investigated via genetic knockout approaches. With CRISPR-Cas12a, up to 100% genome editing efficiency was observed at these miRNA loci. The resulting larger deletions suggest Cas12a robustly generated null alleles of miRNA genes. Transcriptome profiling of the miRNA mutants, as well as phenotypic analysis of the rice grains revealed the function of these miRNAs in controlling gene expression and regulating grain quality and seed development. This study established CRISPR-Cas12a as an efficient tool for genetic knockout of miRNA genes in plants.
近年来,CRISPR-Cas9核酸酶被用于敲除植物中的微RNA(miRNA)基因,极大地促进了对miRNA功能的研究。然而,由于Cas9容易产生小的插入和缺失,因此并不适合实现对miRNA基因的完全敲除。相比之下,CRISPR-Cas12a 核酸酶会产生较大的缺失,这可能会严重破坏前 miRNA 的二级结构,阻止成熟 miRNA 的产生。通过对水稻 OsMIR390 的案例研究,我们证实 Cas12a 是比 Cas9 更有效的产生 miRNA 基因敲除突变体的工具。为了进一步证明 CRISPR-Cas12a 介导的水稻 miRNA 基因敲除,我们以九个 OsMIRNA 基因为靶标,这些基因具有不同的时空表达,而且以前没有通过基因敲除方法进行过研究。利用CRISPR-Cas12a,在这些miRNA基因座上观察到了高达100%的基因组编辑效率。由此产生的较大的缺失表明,Cas12a 能强有力地产生 miRNA 基因的空等位基因。对 miRNA 突变体的转录组分析以及水稻籽粒的表型分析表明,这些 miRNA 具有控制基因表达、调节籽粒品质和种子发育的功能。这项研究证明 CRISPR-Cas12a 是遗传敲除植物 miRNA 基因的有效工具。
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引用次数: 0
PAM-relaxed and temperature-tolerant CRISPR-Mb3Cas12a single transcript unit systems for efficient singular and multiplexed genome editing in rice, maize, and tomato 用于水稻、玉米和番茄高效单一和多路基因组编辑的 PAM 缓解和耐温 CRISPR-Mb3Cas12a 单转录本单元系统
IF 13.8 1区 生物学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-10-10 DOI: 10.1111/pbi.14486
Shishi Liu, Yao He, Tingting Fan, Meirui Zhu, Caiyan Qi, Yanqin Ma, Mengqiao Yang, Liang Yang, Xu Tang, Jianping Zhou, Zhaohui Zhong, Xueli An, Yiping Qi, Yong Zhang
Class 2 Type V-A CRISPR-Cas (Cas12a) nucleases are powerful genome editing tools, particularly effective in A/T-rich genomic regions, complementing the widely used CRISPR-Cas9 in plants. To enhance the utility of Cas12a, we investigate three Cas12a orthologs—Mb3Cas12a, PrCas12a, and HkCas12a—in plants. Protospacer adjacent motif (PAM) requirements, editing efficiencies, and editing profiles are compared in rice. Among these orthologs, Mb3Cas12a exhibits high editing efficiency at target sites with a simpler, relaxed TTV PAM which is less restrictive than the canonical TTTV PAM of LbCas12a and AsCas12a. To optimize Mb3Cas12a, we develop an efficient single transcription unit (STU) system by refining the linker between Mb3Cas12a and CRISPR RNA (crRNA), nuclear localization signal (NLS), and direct repeat (DR). This optimized system enables precise genome editing in rice, particularly for fine-tuning target gene expression by editing promoter regions. Further, we introduced Arginine (R) substitutions at Aspartic acid (D) 172, Asparagine (N) 573, and Lysine (K) 579 of Mb3Cas12a, creating two temperature-tolerant variants: Mb3Cas12a-R (D172R) and Mb3Cas12a-RRR (D172R/N573R/K579R). These variants demonstrate significantly improved editing efficiency at lower temperatures (22 °C and 28 °C) in rice cells, with Mb3Cas12a-RRR showing the best performance. We extend this approach by developing efficient Mb3Cas12a-RRR STU systems in maize and tomato, achieving biallelic mutants targeting single or multiple genes in T0 lines cultivated at 28 °C and 25 °C, respectively. This study significantly expands Cas12a's targeting capabilities in plant genome editing, providing valuable tools for future research and practical applications.
2类V-A型CRISPR-Cas(Cas12a)核酸酶是强大的基因组编辑工具,尤其对富含A/T-的基因组区域有效,是对植物中广泛使用的CRISPR-Cas9的补充。为了提高Cas12a的实用性,我们研究了植物中的三种Cas12a直向同源物--Mb3Cas12a、PrCas12a和HkCas12a。比较了水稻中原位相邻基序(PAM)的要求、编辑效率和编辑概况。在这些直向同源物中,Mb3Cas12a 在目标位点的编辑效率很高,它的 TTV PAM 比 LbCas12a 和 AsCas12a 的规范 TTTV PAM 更简单、宽松,限制性更小。为了优化 Mb3Cas12a,我们通过改进 Mb3Cas12a 与 CRISPR RNA(crRNA)、核定位信号(NLS)和直接重复(DR)之间的连接体,开发出一种高效的单转录单元(STU)系统。这一优化系统实现了水稻基因组的精确编辑,特别是通过编辑启动子区域来微调目标基因的表达。此外,我们还在 Mb3Cas12a 的天冬氨酸(D)172、天冬酰胺(N)573 和赖氨酸(K)579 处引入了精氨酸(R)取代,从而产生了两种耐温变体:Mb3Cas12a-R (D172R) 和 Mb3Cas12a-RRR (D172R/N573R/K579R)。这些变体在水稻细胞中较低温度(22 °C和28 °C)下的编辑效率明显提高,其中Mb3Cas12a-RRR表现最佳。我们通过在玉米和番茄中开发高效的 Mb3Cas12a-RRR STU 系统扩展了这一方法,在分别于 28 ℃ 和 25 ℃ 培养的 T0 株系中实现了针对单个或多个基因的双拷贝突变体。这项研究大大拓展了 Cas12a 在植物基因组编辑中的靶向能力,为未来的研究和实际应用提供了宝贵的工具。
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引用次数: 0
Flexible substrate-based mass spectrometry platform for in situ non-destructive molecular imaging of living plants. 基于基质的灵活质谱平台,用于活体植物的原位无损分子成像。
IF 10.1 1区 生物学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-10-04 DOI: 10.1111/pbi.14482
Guanhua Zhang, Han Zheng, Xiao Wang, Shuxin Han, Wei Liu, Chenglong Sun, Qiongzheng Hu, Chunxia Ma

Monitoring and localizing molecules on living plants is critical for understanding their growth, development and disease. However, current techniques for molecular imaging of living plants often lack spatial information or require tedious pre-labelling. Here, we proposed a novel molecular imaging platform that combines sliver nanowire-doped Ti3C2 MXene (Ag NWs@MXene) flexible film substrate with laser desorption/ionization mass spectrometry imaging (AMF-LDI-MSI) to study the spatial distribution of biomolecules on the surface of living plants. This platform overcomes the MSI challenges posed by difficult-to-slice plant tissues (e.g., tough or water-rich roots and fragile flowers) and enables precisely transfer and visualize the molecule. Comparisons of the measurement results to those from matrix-assisted LDI-MSI (MALDI-MSI) technology demonstrate the accuracy and reliability of the platform. Biocompatibility evaluations indicated that the platform without observable adverse effects on the health of living plants. The distribution of growth and disease-associated signalling molecules, such as choline, organic acids and carbohydrates, can be in situ non-destructively detected on the surfaces of living plants, which is important for tracking the health of plants and their diseased areas. AMF-LDI-MSI platform can serve as a promising tool for label-free, in situ and non-destructive monitoring of functional biomolecules and plant growth from a spatial perspective.

监测和定位活体植物上的分子对于了解其生长、发育和疾病至关重要。然而,目前用于活体植物分子成像的技术往往缺乏空间信息或需要繁琐的预标记。在此,我们提出了一种新型分子成像平台,该平台结合了银条纳米线掺杂的 Ti3C2 MXene(Ag NWs@MXene)柔性薄膜基底和激光解吸电离质谱成像(AMF-LDI-MSI),用于研究生物分子在活体植物表面的空间分布。该平台克服了难以切片的植物组织(如坚韧或富含水分的根和脆弱的花)所带来的 MSI 挑战,实现了分子的精确转移和可视化。将测量结果与基质辅助 LDI-MSI (MALDI-MSI)技术的测量结果进行比较,证明了该平台的准确性和可靠性。生物兼容性评估表明,该平台对活植物的健康没有明显的不良影响。可在活体植物表面原位非破坏性地检测胆碱、有机酸和碳水化合物等与生长和疾病相关的信号分子的分布情况,这对跟踪植物的健康状况及其患病部位非常重要。AMF-LDI-MSI 平台可作为一种前景广阔的工具,从空间角度对功能生物分子和植物生长进行无标记、原位和非破坏性监测。
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引用次数: 0
Maize-Tripsacum-Teosinte allopolyploid (MTP), a novel dwarf mutant inducer tool in maize 玉米三倍体(MTP)--一种新型的玉米矮小突变诱导工具
IF 13.8 1区 生物学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-10-03 DOI: 10.1111/pbi.14483
Yang Zhou, Yang Li, Lin Luo, Delong Zhang, Xingyu Wang, Yu Chen, Yibo Zhang, Qiyuan Zhang, Hanyu Luo, Pengfei Xie, Yiyang Du, Saifei Duan, Yong Zhou, Tao Yang, Xiaofeng Li, Ruyu He, Yingzheng Li, Mingjun Cheng, Yan Li, Zhibin Ma, Jianmei He, Tingzhao Rong, Qilin Tang
Dwarf plant architecture facilitates dense planting, and increased planting densities boost the maize yield. However, breeding applications of dwarfing materials for maize are currently limited. There is an urgent need remove the obstacles to applying dwarf resources. Here, we innovated a new method to add a novel maize dwarf germplasm through the distant hybridization of Maize–Tripsacum–Teosinte allopolyploid (MTP) with maize. We identified ten independent dwarf families with unique characteristics. Five germplasms in our library were controlled by their respective dwarf genes. However, no allele was controlled by Br2. Subsequently, d024 in the library was successfully fine mapped, revealing its linkage to indel-4 in ZmCYP90D1. The indel-4 polymorphism regulates the expression of ZmCYP90D1 and is controlled by an upstream transcription factor (ZmBES1/BZR1-5). The indel-4 of ZmCYP90D1 allele, which reduces plant height, originated from Tripsacum, a wild variety of maize. However, d024 exhibits sensitivity to brassinosteroids (BRs), with lower castasterone levels in the internodes than that in the wild type. Furthermore, ZmCYP90D1 interacted with ZmFDXs and ZmNAD(P)H to positively regulate the downstream BR synthesis pathway. Additionally, we showed that introgressing the indel-4 of the Tripsacum allele into modern hybrids ensures yield potential and improves the harvest index under high-density conditions. Overall, as we begin to manufacture highly engineered dwarf materials using the MTP, this approach will solve the problems faced by corn dwarfs.
矮小的植株结构有利于密植,增加种植密度可提高玉米产量。然而,矮化材料在玉米育种中的应用目前还很有限。迫切需要消除矮化资源应用的障碍。在此,我们创新了一种新方法,通过玉米-三尖杉-特新特异多倍体(MTP)与玉米的远缘杂交来增加新型玉米矮秆种质。我们发现了十个具有独特特征的独立矮化品系。我们文库中的五个种质受各自矮化基因的控制。但是,没有一个等位基因受 Br2 控制。随后,我们成功地对文库中的 d024 进行了精细测绘,发现它与 ZmCYP90D1 中的 indel-4 有关联。吲哚-4多态性调节 ZmCYP90D1 的表达,并受上游转录因子(ZmBES1/BZR1-5)的控制。ZmCYP90D1 的 indel-4 等位基因会降低植株高度,该等位基因源自玉米野生品种 Tripsacum。然而,d024 表现出对黄铜类固醇(BRs)的敏感性,节间的蓖麻酮含量低于野生型。此外,ZmCYP90D1 与 ZmFDXs 和 ZmNAD(P)H 相互作用,对下游 BR 合成途径起积极调节作用。此外,我们还发现,在高密度条件下,将三叶草等位基因的吲哚-4导入现代杂交种可确保产量潜力并提高收获指数。总之,随着我们开始利用 MTP 制造高度工程化的矮化材料,这种方法将解决玉米矮化所面临的问题。
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引用次数: 0
Tetraspanin 5 orchestrates resilience to salt stress through the regulation of ion and reactive oxygen species homeostasis in rice. 四泛素5通过调节水稻中离子和活性氧的平衡来协调对盐胁迫的恢复能力。
IF 10.1 1区 生物学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-10-02 DOI: 10.1111/pbi.14476
Balaji Mani, Inderjit Kaur, Yashika Dhingra, Vidisha Saxena, G K Krishna, Rahul Kumar, Viswanathan Chinnusamy, Manu Agarwal, Surekha Katiyar-Agarwal

Tetraspanins (TETs) are integral membrane proteins, characterized by four transmembrane domains and a unique signature motif in their large extracellular loop. They form dynamic supramolecular complexes called tetraspanin-enriched microdomains (TEMs), through interactions with partner proteins. In plants, TETs are involved in development, reproduction and immune responses, but their role in defining abiotic stress responses is largely underexplored. We focused on OsTET5, which is differentially expressed under various abiotic stresses and localizes to both plasma membrane and endoplasmic reticulum. Using overexpression and underexpression transgenic lines we demonstrate that OsTET5 contributes to salinity and drought stress tolerance in rice. OsTET5 can interact with itself in yeast, suggesting homomer formation. Immunoblotting of native PAGE of microsomal fraction enriched from OsTET5-Myc transgenic rice lines revealed multimeric complexes containing OsTET5, suggesting the potential formation of TEM complexes. Transcriptome analysis, coupled with quantitative PCR-based validation, of OsTET5-altered transgenic lines unveiled the differential expression patterns of several stress-responsive genes, as well as those coding for transporters under salt stress. Notably, OsTET5 plays a crucial role in maintaining the ionic equilibrium during salinity stress, particularly by preserving an elevated potassium-to-sodium (K+/Na+) ratio. OsTET5 also regulates reactive oxygen species homeostasis, primarily by modulating the gene expression and activities of antioxidant pathway enzymes and proline accumulation. Our comprehensive investigation underscores the multifaceted role of OsTET5 in rice, accentuating its significance in developmental processes and abiotic stress tolerance. These findings open new avenues for potential strategies aimed at enhancing stress resilience and making valuable contributions to global food security.

四跨蛋白(TETs)是一种整体膜蛋白,具有四个跨膜结构域,其细胞外大环上有一个独特的标志性图案。它们通过与伙伴蛋白相互作用,形成动态的超分子复合物,称为四跨蛋白富集微域(TEM)。在植物中,TETs 参与发育、繁殖和免疫反应,但它们在确定非生物胁迫反应中的作用却大多未得到充分探索。我们重点研究了 OsTET5,它在各种非生物胁迫下都有不同程度的表达,并定位在质膜和内质网上。利用过表达和低表达转基因品系,我们证明了 OsTET5 对水稻耐盐碱和干旱胁迫的贡献。在酵母中,OsTET5 能与自身相互作用,这表明它能形成同源物。对从 OsTET5-Myc 转基因水稻品系中富集的微粒体部分的原生 PAGE 进行免疫印迹,发现了含有 OsTET5 的多聚体复合物,这表明可能形成了 TEM 复合物。通过对 OsTET5 改变的转基因品系进行转录组分析以及基于定量 PCR 的验证,揭示了盐胁迫下多个胁迫响应基因以及转运体编码基因的不同表达模式。值得注意的是,OsTET5 在维持盐胁迫期间的离子平衡方面发挥了关键作用,特别是通过保持钾钠(K+/Na+)比率的升高。OsTET5 还主要通过调节抗氧化途径酶的基因表达和活性以及脯氨酸的积累来调节活性氧的平衡。我们的综合研究强调了 OsTET5 在水稻中的多方面作用,突出了它在发育过程和耐受非生物胁迫方面的重要意义。这些发现为旨在提高抗逆性的潜在策略开辟了新途径,并为全球粮食安全做出了宝贵贡献。
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引用次数: 0
Generation of OsGRF4 and OsSNAC1 alleles for improving rice agronomic traits by CRISPR/Cas9-mediated manipulation of transposable elements. 通过 CRISPR/Cas9 介导的转座元件操作,产生 OsGRF4 和 OsSNAC1 等位基因以改善水稻农艺性状。
IF 10.1 1区 生物学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-10-01 DOI: 10.1111/pbi.14465
Yunna Zheng, Mingjiang Chen, Dunpin Xiong, Xiangbing Meng, Hong Yu, Hongwen Wang, Jiayang Li
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引用次数: 0
Limonene enhances rice plant resistance to a piercing‐sucking herbivore and rice pathogens 柠檬烯能增强水稻植株对刺吸式食草动物和水稻病原体的抵抗力
IF 13.8 1区 生物学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-09-28 DOI: 10.1111/pbi.14481
Chang‐Lai Qiu, Wei Li, Ling‐Nan Wang, Shi‐Cheng Wang, Supaporn Falert, Chao Wang, Shi‐Yu Yu, Sara Taha Abdelkhalek, Jing Lu, Yong‐Jun Lin, Man‐Qun Wang
SummaryTerpene synthases (TPSs) are key enzymes in terpenoids synthesis of plants and play crucial roles in regulating plant defence against pests and diseases. Here, we report the functional characterization of OsTPS19 and OsTPS20, which were upregulated by the attack of brown planthopper (BPH). BPH female adults performed concentration‐dependent behavioural responses to (S)‐limonene showing preference behaviour at low concentrations and avoidance behaviour at high concentrations. Overexpression lines of OsTPS19 and OsTPS20, which emitted higher amounts of the monoterpene (S)‐limonene, decreased the hatching rate of BPH eggs, reduced the lesion length of sheath blight caused by Rhizoctonia solani and bacterial blight caused by Xanthomonas oryzae. While knockout lines of OsTPS19 and OsTPS20, which emitted lower amounts of (S)‐limonene, were more susceptible to these pathogens. Overexpression of OsTPS19 and OsTPS20 in rice plants had adverse effects on the incidence of BPH, rice blast, and sheath blight in the field and had no significant impacts on rice yield traits. OsTPS19 and OsTPS20 were found to be involved in fine‐tuning the emission of (S)‐limonene in rice plants and play an important role in defence against both BPH and rice pathogens.
摘要萜合成酶(TPSs)是植物合成萜类化合物的关键酶,在调节植物防御病虫害方面发挥着重要作用。本文报告了 OsTPS19 和 OsTPS20 的功能特征。褐飞虱雌成虫对(S)-柠檬烯的行为反应具有浓度依赖性,低浓度时表现出偏好行为,高浓度时表现出回避行为。OsTPS19 和 OsTPS20 的过表达株系能释放出更多的单萜(S)-柠檬烯,它们能降低 BPH 卵的孵化率,减少由根瘤菌(Rhizoctonia solani)引起的鞘枯病和由黄单胞菌(Xanthomonas oryzae)引起的细菌性枯萎病的病斑长度。OsTPS19和OsTPS20基因敲除品系释放的(S)-柠檬烯含量较低,更容易受到这些病原体的感染。在水稻植株中过表达 OsTPS19 和 OsTPS20 会对田间 BPH、稻瘟病和鞘枯病的发病率产生不利影响,但对水稻产量性状没有显著影响。研究发现,OsTPS19 和 OsTPS20 参与微调水稻植株中(S)-柠檬烯的释放,并在抵御 BPH 和水稻病原体方面发挥重要作用。
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引用次数: 0
Engineering PE6 prime editors to efficiently insert tags in rice 设计 PE6 主编辑器,在水稻中高效插入标记
IF 13.8 1区 生物学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2024-09-27 DOI: 10.1111/pbi.14456
Rongfang Xu, Chong Ma, Jiaqi Sheng, Jiahui Zhu, Dongmei Wang, Xiaoshuang Liu, Qing Wang, Juan Li, Ruiying Qin, Pengcheng Wei
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Plant Biotechnology Journal
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