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Monkeypox: Insights into virus morphology, clinical manifestations, and mitigation strategies in developing nations 猴痘:对发展中国家病毒形态、临床表现和缓解策略的见解
Q3 Agricultural and Biological Sciences Pub Date : 2023-07-01 DOI: 10.21608/nrmj.2023.313345
Ram Khadka, Khimdhoj Karki, Gautam Chaudhary, Jitendra Pandey
Monkeypox is an emerging zoonotic disease caused by the monkeypox virus (MPXV) and shares similarities with the other Orthopoxviruses . This review aimed to explore the morphology of MPXV, clinical manifestations, and mitigation strategies in the developing nations. Clinically, MPXV resembles smallpox. It has an unidentified natural host, despite it has been isolated from the rope squirrels and Sooty mangabeys . Transmission occurs through the respiratory excretions, saliva, contact with lesions, and potentially via the feces. The disease comprises a prodromal phase and subsequent skin rash. Originating in 1959 following a monkey outbreak in Copenhagen's research institute; the initial human case was documented in 1970 in the Democratic Republic of Congo. The virus subsequently dispersed globally; impacting several nations such as UK, USA, Israel, and Singapore. Thus, in addition to the healthcare infrastructure, combating monkeypox in the developing countries requires bolstering the disease surveillance, public awareness, diagnostic capabilities, and vaccination campaigns. Sustainable international collaboration and extensive scientific investigations are crucial for safeguarding the public health and preventing further spread of this viral disease.
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引用次数: 0
Exploring the microbial dynamics for heavy metals bioremediation in the industrial wastewater treatment: A critical review 工业废水处理中重金属生物修复的微生物动力学研究综述
Q3 Agricultural and Biological Sciences Pub Date : 2023-07-01 DOI: 10.21608/nrmj.2023.307215
Malathi H, Pooja Sharma
The purpose of this review article was to provide a concise overview of the current researches on the topic of in-situ microbial remediation of heavy metals (HM) in the industrial wastewater. Due to the ever-expanding industrial sector; groundwater contamination by HM is a global environmental crisis. Heavy metals; environmental pollution, and the adaptive mechanisms that allow the bacteria to thrive in the metal-contaminated environments, have all been linked to the dramatic shifts in the microbial diversity, which are observed during the microbial restoration. It has been suggested that in situ bioremediation (ISB) can help with the emerging contamination problems; as the bacteria can be used to clean up the polluted areas. In the future, the researchers should pay more attention to the assessment methodologies for determining the success of remediation using ISB technology. Bio-remediation is only effective if the polluted area is properly characterized; the appropriate microbial species is chosen, and the harmful metals are easily accessible for absorption. This new technology uses bacteria to remove the harmful metals from the environment at a low cost. This study analyzes the effectiveness of bioremediation using microorganisms; using unique methodologies and integrated assessment methods. In addition to providing an overview of ISB for pollutant(s) elimination; this review is useful for comprehending the primary functions of microorganisms in this process.
本文旨在对工业废水中重金属的原位微生物修复研究现状进行简要综述。由于工业部门不断扩大;HM对地下水的污染是一场全球性的环境危机。重金属;环境污染,以及允许细菌在金属污染环境中繁殖的适应机制,都与微生物多样性的急剧变化有关,这些变化是在微生物恢复过程中观察到的。有人认为,原位生物修复(ISB)可以帮助解决新出现的污染问题;因为细菌可以用来清理污染区域。未来,研究人员应该更多地关注使用ISB技术确定修复成功与否的评估方法。生物修复只有在污染区域特征正确的情况下才有效;选择合适的微生物种类,有害金属易于吸收。这项新技术利用细菌以低成本去除环境中的有害金属。本研究分析了利用微生物进行生物修复的有效性;使用独特的方法和综合评估方法。除了提供消除污染物的ISB概述外;这篇综述有助于理解微生物在这一过程中的主要功能。
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引用次数: 0
Regional and seasonal variation of Fusarium and Oomycetes species associated with apple seedlings decline in Tunisian nurseries 突尼斯苗圃中与苹果幼苗衰退相关的镰刀菌和卵菌属物种的区域和季节变化
Q3 Agricultural and Biological Sciences Pub Date : 2023-06-26 DOI: 10.21608/nrmj.2023.305463
S. Mannai, N. Benfradj, N. Boughalleb-M’hamdi
Apple decline, which is responsible for seedlings root and collar rot in the nurseries, is a serious disease that causes reduction in apple plant production. The aim of this study was to evaluate the regional and seasonal distribution of the fungi and Oomycetes, which were associated with the apple decline disease in the Tunisian nurseries. In this study, surveys were conducted from autumn, 2015 to summer, 2016. Apple plants were sampled to detect and quantify the inoculum density of these pathogens. Based on the morphological characteristics; two Fusarium and two Pythiaceae spp. were obtained. The most dominant species were F. oxysporum (33.9 %); Pythium ultimum (33.05 %), F. solani (16.95 %), and Phytopythium mercuriale (16.1 %). Results of the seasonal variation showed that Fusarium spp. and Pythiaceae populations had peaked in June. The populations of F. oxysporum and F. solani were significantly and positively correlated to temperature. In relation to the soil physicochemical characteristics; the Pearson correlation showed that the population of P. ultimum was positively related to the nitrogen (N) content (r = 0.59); sand (r= 0.82), organic matter (r = 0.85), and organic carbon (r = 0.84). However, this species was negatively correlated with the silt content (r = -0.79); clay (r = -0.84), and electrical conductivity (r = - 0.74). The Phytopythium mercuriale population was positively correlated with nitrogen content (r = 0.64), and negatively correlated with soil pH (r = -0.62); clay content (r = -0.47), and silt (r = -0.54).
苹果衰退是造成苗圃幼苗根部和项圈腐烂的一种严重疾病,会导致苹果植株产量下降。本研究的目的是评估突尼斯苗圃中与苹果衰退病有关的真菌和卵菌的区域和季节分布。在本研究中,调查于2015年秋季至2016年夏季进行。对苹果植株进行取样,以检测和量化这些病原体的接种密度。基于形态学特征;获得2个镰刀菌属和2个Pythiaceae属。优势种为尖孢镰刀菌(33.9%);最后腐霉(33.05%)、龙葵(16.95%)和汞根腐霉(16.1%)。季节变化结果表明,镰刀菌属和Pythiaceae种群在6月达到峰值。尖孢镰刀菌和茄尼镰刀菌种群与温度呈显著正相关。与土壤理化特性有关;Pearson相关分析表明,P.ultium种群与氮含量呈正相关(r=0.59);砂(r=0.82)、有机质(r=0.85)和有机碳(r=0.84)。但该物种与含泥量呈负相关(r=-0.79);粘粒(r=-0.84),电导率(r=-0.74)。汞藻种群与氮含量呈正相关(r=0.64),与土壤pH呈负相关(r=-0.62);粘土含量(r=-0.47)和粉土含量(r=-0.54)。
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引用次数: 0
Bacteriophage endolysins and their role in eradication of bacterial biofilms 噬菌体溶血素及其在细菌生物膜根除中的作用
Q3 Agricultural and Biological Sciences Pub Date : 2023-06-19 DOI: 10.21608/nrmj.2023.304309
Anugrah Masih, Ashutosh Kumar Singh
Biofilm is the protective coating that the bacteria use to thrive in their environment without being damaged by radiation or the effects of antibiotics. Nosocomial infections that are often caused by biofilms have been demonstrated to be very challenging to cure because of their complicated molecular structure and resistance to antibiotics. Biofilms of bacteria that form on the medical equipment pose a risk to patients and facilitate the transmission of infection. Progress has been made in eliminating bacterial biofilms by combining bacteriophage with antibiotics for a synergistic impact and employing the phage-lysin efficiently. The aim of this study was to explore the potential efficacy of phages and lysins alone and/ or in conjunction with antibiotics to combating biofilm conformation and eradication. This review article is broadly divided into two parts; the first section focused on molecular mechanism of biofilm formation and risk of bacterial biofilms in the hospital settings. The second part of the review is giving an insight on bacteriophage derived lytic protein-endolysin, which has emerged as a potential alternative to eliminate bacterial biofilms, and should be explored to combat infections caused by them.
生物膜是细菌用来在环境中生长而不受辐射或抗生素影响的保护性涂层。由于生物膜的复杂分子结构和对抗生素的耐药性,通常由生物膜引起的医院感染被证明是非常难以治愈的。医疗设备上形成的细菌生物膜对患者构成风险,并促进感染的传播。通过将噬菌体与抗生素结合以产生协同作用并有效利用噬菌体裂解素,在消除细菌生物膜方面取得了进展。本研究的目的是探索噬菌体和溶血素单独和/或与抗生素联合对抗生物膜构象和根除的潜在疗效。这篇综述文章大致分为两个部分;第一节重点介绍了生物膜形成的分子机制和医院环境中细菌生物膜的风险。综述的第二部分是深入了解噬菌体衍生的裂解蛋白内溶素,它已成为消除细菌生物膜的潜在替代品,应被探索以对抗由其引起的感染。
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引用次数: 0
Bio-control of Chocolate spot disease of Faba bean using potential rhizobacterial strains under field conditions in Northwestern Ethiopia 利用潜在根瘤菌在埃塞俄比亚西北部大田条件下对蚕豆巧克力斑病的生物防治
Q3 Agricultural and Biological Sciences Pub Date : 2023-05-01 DOI: 10.21608/nrmj.2023.303798
Gebeyehu Y. Mengstie, Zewdu T. Awlachew, Atsede M. Degefa
Faba bean ( Vicia faba L.) is an important legume that is frequently produced in the highlands of Ethiopia. However, the production of faba bean in this country is limited by the chocolate spot disease caused by Botrytis fabae . The purpose of this study was to evaluate the efficacy of Chryseobacterium strain GY04; Chryseobacterium proteolyticum GY05, and Pseudomonas chlororaphis GY07 on chocolate spot disease management; faba bean growth promotion, and improvement of the yield-related parameters under field conditions. All the three rhizobacteria significantly reduced the incidence and severity of chocolate spot disease in both tested varieties ( i.e ., Local and Dosha), compared with the control. In both faba bean varieties, the highest disease incidence reduction (%) was observed on the plot treated by P. chlororaphis GY07; recording 73.07 % and 75.86 % in the Local and Dosha varieties, respectively. In terms of disease severity, inoculation of P. chlororaphis GY07 in the Local and Dosha varieties resulted in an 84.3 % and 81.5 % reduction in the disease severity, respectively. All the three tested rhizobacterial strains caused growth parameters enhancement with different potentials. In both faba bean varieties, the highest growth promotion was observed on the plot treated with P. chlororaphis GY07, followed by Chryseobacterium strain GY04, and Chryseobacterium proteolyticum GY05. All of the rhizobacteria had a significant enhancement potential on the number of pods per plant and grains weight, compared to the un-inoculated treatment. The results of this study give a clue that these rhizobacterial strains may be used as biocontrol agents for chocolate spot diseases, and as bio-inoculants for enhancement of faba bean production.
蚕豆(Vicia Faba L.)是一种重要的豆科植物,经常在埃塞俄比亚高地生产。然而,由于蚕豆芽孢杆菌引起的巧克力斑病,我国蚕豆的生产受到限制。本研究的目的是评价黄杆菌菌株GY04的效果;溶蛋白黄杆菌GY05和绿假单胞菌GY07对巧克力斑疹病的防治作用促进蚕豆生长,改善田间条件下的产量相关参数。与对照相比,这三种根瘤菌在两个受试品种(即Local和Dosha)中均显著降低了巧克力斑疹病的发病率和严重程度。在两个蚕豆品种中,以绿蚜GY07处理的小区发病率降低率最高(%);本地品种占73.07%,多沙品种占75.86%。就病害严重程度而言,接种地方品种和多沙品种的绿蚜GY07可使病害严重程度分别降低84.3%和81.5%。3株被试菌均对生长参数有不同的促进作用。在两个蚕豆品种中,绿芽孢杆菌GY07处理的生长促进作用最大,其次是黄杆菌GY04和溶蛋白黄杆菌GY05。与未接种处理相比,所有根瘤菌对单株荚果数和籽粒重均有显著提高的潜力。本研究结果提示,这些根瘤菌菌株可作为巧克力斑疹病的生物防治剂和蚕豆增产的生物接种剂。
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引用次数: 0
Prevalence and characterization of plasmid-mediated quinolone resistance genes in Proteus species isolated from different patients 不同患者变形杆菌中质粒介导的喹诺酮类耐药基因的流行及特性分析
Q3 Agricultural and Biological Sciences Pub Date : 2023-05-01 DOI: 10.21608/nrmj.2023.300633
Dalia G. Ali, Gamal F. M. Gad, Osman A. O. Ismail, Hala R. Ahmed, Reham A. Ibrahem
Proteus spp. are widely distributed opportunistic pathogens that can cause various human infections. A total of 361 clinical specimens were obtained from patients who were attending to different hospitals in El-Minia governorate, Egypt. Approximately 23 % of the samples belong to Proteus spp. isolates which were obtained from various clinical sources. After biochemical identification, 42.1 % of isolates were found to belong to Proteus vulgaris and 57.8 % to P. mirabilis . The urine samples collected from catheterized patients represented 32.6 % of all the clinical specimens, and the majority of the recorded isolates were Proteus spp. The antibacterial sensitivity of the Proteus spp. was examined using 16 different antibiotics from various families. The most effective antibiotics were Amikacin; Levofloxacin, and Meropenem, recording 68.6 %, 66.2 %, and 62.2 % of the isolates sensitivity to each of these antibiotics, respectively. Using the ureR -based PCR, 48 % of the isolates were identified as P. mirabilis . Moreover, the Qnr genes ( i.e ., qnrA , qnrB , qnrS , qnrD , and qnrC ) and the aac (6')- Ib-cr gene had been identified in 40 % of P. mirabilis isolates. The aims of the study were to investigate the prevalence of Proteus spp. in El-Minia, Egypt; determine the antibacterial susceptibility pattern of these isolates, and characterize the PMQR genes in Proteus spp. Quinolone resistance in P. mirabilis isolates might have been brought on by mechanisms other than qnr and aac (6')-Ib genes. Finally, since Proteus spp. are widespread in the environment; healthcare facilities must uphold stringent sanitation standards to reduce the incidence of the nosocomial infections.
变形杆菌是广泛分布的机会性病原体,可引起各种人类感染。从埃及El Minia省不同医院就诊的患者身上共获得361份临床标本。大约23%的样品属于变形杆菌属。分离物是从各种临床来源获得的。经生化鉴定,42.1%的菌株属于寻常变形杆菌,57.8%的菌株属于奇异变形杆菌。从导管患者身上采集的尿液样本占所有临床样本的32.6%,大多数记录的分离株是变形杆菌。使用来自不同家族的16种不同抗生素检测了变形杆菌的抗菌敏感性。最有效的抗生素是阿米卡星;左氧氟沙星和美罗培南对每种抗生素的敏感性分别为68.6%、66.2%和62.2%。利用基于ureR的聚合酶链式反应,48%的分离株被鉴定为奇异假单胞菌。此外,在40%的奇异毕赤霉分离株中鉴定出了Qnr基因(即qnrA、qnrB、qnrS、qnrD和qnrC)和aac(6’)-Ib-cr基因。本研究的目的是调查变形杆菌在埃及El Minia的流行情况;确定这些分离株的抗菌易感性模式,并表征变形杆菌中的PMQR基因。奇异紫外假单胞菌分离株对喹诺酮类药物的耐药性可能是由qnr和aac(6')-Ib基因以外的机制引起的。最后,由于变形杆菌在环境中广泛存在;医疗机构必须坚持严格的卫生标准,以降低医院感染的发生率。
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引用次数: 0
A review on Actinomycetes distribution, isolation, and their medical applications 放线菌的分布、分离及其医学应用研究进展
Q3 Agricultural and Biological Sciences Pub Date : 2023-04-06 DOI: 10.21608/nrmj.2023.294180
Abeer Muazi Alenazi, Y. Anwar, Salah E.M. Abo-Aba, Noor M. Bataweel
Actinomycetes (Actinobacteria) are Gram-positive bacteria that grow in a variety of environments and have a filamentous shape similar to fungi. The actinomycetes distinguish themselves morphologically by forming a layer of hyphae that carry chains of spores. The aim of this study was to update the recent developments related to the actinomycetes. Streptomyces ; as an actinomycete, is known for producing a number of bioactive secondary metabolites, including anti-tumour agents; antibiotics, antifungals, antivirals, anti-hypertension drugs, and immunosuppressives. In order to compete with other microorganisms, including those of the same genera, Streptomyces species produce several secondary metabolites. However, despite the discovery of antibiotics, the infectious diseases remain the second-leading cause of death worldwide. Each year, around 17 million people die from bacterial infections; mainly children and the elderly. In addition to the overuse of antibiotics, a key factor contributing to antibiotic resistance is self-medication, which reduces the lifespan of antibiotics.
放线菌是一种革兰氏阳性细菌,生长在各种环境中,具有类似真菌的丝状形状。放线菌通过形成一层携带孢子链的菌丝在形态上区分自己。本研究旨在更新放线菌的最新研究进展。链霉菌;作为一种放线菌,已知能产生许多具有生物活性的次级代谢产物,包括抗肿瘤药物;抗生素、抗真菌药物、抗病毒药物、抗高血压药物和免疫抑制剂。为了与包括同属微生物在内的其他微生物竞争,链霉菌会产生几种次级代谢产物。然而,尽管发现了抗生素,传染病仍然是全球第二大死亡原因。每年约有1700万人死于细菌感染;主要是儿童和老人。除了过度使用抗生素外,导致抗生素耐药性的一个关键因素是自我用药,这会缩短抗生素的使用寿命。
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引用次数: 1
Priming of wheat plant with weed extracts, calcium and salicylic acid for contribution to alleviating the oxidative stress imposed by Fusarium graminearum and lead toxicity 用杂草提取物、钙和水杨酸引发小麦植株,以减轻禾谷镰刀菌的氧化应激和铅毒性
Q3 Agricultural and Biological Sciences Pub Date : 2023-03-11 DOI: 10.21608/nrmj.2023.294938
Sherien E. Sobhy, Dalia G. Aseel, Essam-Eldeen M. Abo-Kassem, Nasser A. Sewelam, Khalil M. Saad-Allah, Marwa A. Samy, Elsayed E. Hafez
Biotic and abiotic stress factors drastically limit plant growth and productivity through changing the physiological, biochemical, and cellular processes. In this study, 100 mM of lead (Pb) was used as an abiotic stress source, while Fusarium graminearum represented a biotic one on wheat plant. Compared to the control, Pb treatment and F. graminearum inoculation led to remarkable reductions in the wheat seedlings leaf area that reached 21 %, and 12.5 %, respectively. Moreover, the current results showed an enhanced activity of Phenylalanine ammonia lyase (PAL) that reached 173 % in the stressed wheat grains and seedlings, decreased mineral contents in N -3 , P +3 , K + , and Ca +2 in the shoot
生物和非生物胁迫因子通过改变生理、生化和细胞过程,极大地限制了植物的生长和生产力。在本研究中,100mM的铅(Pb)被用作非生物胁迫源,而禾谷镰刀菌代表了小麦植株上的生物胁迫源。与对照相比,Pb处理和接种禾谷镰刀菌显著减少了小麦幼苗的叶面积,分别达到21%和12.5%。此外,目前的研究结果表明,受胁迫的小麦籽粒和幼苗中苯丙氨酸解氨酶(PAL)的活性提高了173%,而地上部氮、磷、钾和钙的矿物质含量降低了
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引用次数: 0
Mycotoxins in fermented foods: A comprehensive review 发酵食品中的真菌毒素:综述
Q3 Agricultural and Biological Sciences Pub Date : 2023-03-01 DOI: 10.21608/nrmj.2023.293196
Souvik Roy, D. Shaw, Tiyasha Sarkar, Lopamudra Choudhury
While the super-swift escalation of antibiotic-resistant pathogenic microbial strains is a great matter of public health concern; however, mycotoxins are not to be forgotten as well. According to the statistical analyses, mycotoxins contaminate up to 25 % of the world’s food supply and contribute to a substantial amount of food spoilage. These toxins, which are secondary metabolites of certain species of pathogenic fungi, are responsible for a variety of adverse health effects that range from acute food poisoning to long-term effects, such as cancer; pregnancy disruption, and immunodeficiency. Although fermented foods have been consumed since time immemorial, in the 21 st century, they are gaining immense popularity owing to their numerous health benefits. However, it should be noted that mycotoxin-infested fermented food is not uncommon, due to the use of poor-quality starter microbial cultures for fermentation and/or other improper practices; thus making this mycotoxin-infested fermented food an important food safety issue. However, due to the recent developments in food processing and the advent of very sophisticated and precise techniques, such as immunoassay and chromatography analysis, which are used to detect these mycotoxins, detecting their presence has become easier. This review aimed to address several aspects pertaining to mycotoxins, including their predominant types and producer fungi; their harmful effects, methods of sampling and extraction from fermented foods, and their detection and analysis techniques, in addition to the methods used to mitigate those.
尽管抗生素耐药性病原微生物菌株的超快速升级是公众健康关注的重大问题;然而,真菌毒素也不能被遗忘。根据统计分析,真菌毒素污染了世界上高达25%的食物供应,并导致大量食物变质。这些毒素是某些致病真菌的次级代谢产物,对健康产生各种不良影响,从急性食物中毒到长期影响,如癌症;妊娠中断和免疫缺陷。尽管发酵食品自古以来就被人们食用,但在21世纪,它们因其众多的健康益处而越来越受欢迎。然而,应该注意的是,真菌毒素感染的发酵食品并不罕见,因为使用了质量较差的发酵剂微生物培养物进行发酵和/或其他不当做法;因此,这种霉菌毒素滋生的发酵食品成为一个重要的食品安全问题。然而,由于食品加工的最新发展以及用于检测这些真菌毒素的非常复杂和精确的技术的出现,如免疫测定和色谱分析,检测它们的存在变得更加容易。这篇综述旨在解决与真菌毒素有关的几个方面,包括它们的主要类型和生产真菌;它们的有害影响,从发酵食品中取样和提取的方法,以及它们的检测和分析技术,以及用于减轻这些影响的方法。
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引用次数: 2
Different formulation approaches to improve the survivability of probiotics in the digestive tract 提高益生菌在消化道中生存能力的不同配方方法
Q3 Agricultural and Biological Sciences Pub Date : 2023-03-01 DOI: 10.21608/nrmj.2023.291832
Radhika R Baheti, J. Mahore, V. Patole
This review aimed to present the various approaches that have been used to protect the probiotics from the toxic effects of the gastrointestinal tract (GIT) during oral delivery. A microbiota is a collection of trillions of microorganisms that live within the human body and form an ecosystem that is complex, adaptive, and unique to each organ. The probiotics have varied applications and exhibit side effects; as a result, they have been employed as food supplements with both therapeutic and prophylactic effects on disorders of the gastric and non-gastric regions. The significant contribution of probiotics to the maintenance of health has expanded the scope of their use in advanced research areas. A significant number of microorganisms will survive and thrive in the gastrointestinal tract (GIT); even after being exposed to several toxic substances such as bile salts and acids. Prevention of probiotics from the harmful effects of gastric acid and other enzymatic barriers, in addition to their delivery to the the intestinal region, has been a great challenge. The new approaches designed for probiotic therapies work on stabilizing the probiotics through several mechanisms; leading to a significant number of probiotics that are available after passing through the various GI barriers, in addition to showing the desired therapeutic and/ or prophylactic effects. A brief critique of the health effects of probiotics, issues associated with their delivery, and the various formulation strategies employed to improve the probiotic transport are provided in the current review.
这篇综述旨在介绍在口服给药过程中用于保护益生菌免受胃肠道(GIT)毒性影响的各种方法。微生物群是生活在人体内的数万亿微生物的集合,形成了一个复杂、适应性强、每个器官都独特的生态系统。益生菌具有多种应用,并表现出副作用;因此,它们被用作食品补充剂,对胃和非胃区域的疾病具有治疗和预防作用。益生菌对维持健康的重大贡献扩大了其在高级研究领域的应用范围。大量微生物将在胃肠道(GIT)中存活并茁壮成长;即使在暴露于几种有毒物质如胆汁盐和酸之后。预防益生菌对胃酸和其他酶屏障的有害影响,以及将其输送到肠道区域,一直是一个巨大的挑战。为益生菌疗法设计的新方法通过几种机制稳定益生菌;导致在通过各种胃肠道屏障后除了显示出所需的治疗和/或预防效果之外还有大量的益生菌可用。本综述对益生菌的健康影响、与益生菌递送相关的问题以及用于改善益生菌运输的各种配方策略进行了简要评述。
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引用次数: 0
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