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Cognitive reappraisal improves the social decision-making performance of suicide attempters 认知再评价可提高自杀企图者的社会决策能力
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-07-01 DOI: 10.1016/j.fmre.2024.06.008
Wang Tong, Xiaoya Liu, Duan Moxin, Zhang Bo, An Li, Shuang Liu, Ming Dong
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引用次数: 0
The role of anesthesia in peri‑operative neurocognitive disorders: Molecular mechanisms and preventive strategies 麻醉在围手术期神经认知障碍中的作用:分子机制和预防策略
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-07-01 DOI: 10.1016/j.fmre.2023.02.007

Peri-operative neurocognitive disorders (PNDs) include postoperative delirium (POD) and postoperative cognitive dysfunction (POCD). Children and the elderly are the two populations most vulnerable to the development of POD and POCD, which results in both high morbidity and mortality. There are many factors, including neuroinflammation and oxidative stress, that are associated with POD and POCD. General anesthesia is a major risk factor of PNDs. However, the molecular mechanisms of PNDs are poorly understood. Dexmedetomidine (DEX) is a useful sedative agent with analgesic properties, which significantly improves POCD in elderly patients. In this review, the current understanding of anesthesia in PNDs and the protective effects of DEX are summarized, and the underlying mechanisms are further discussed.

围手术期神经认知障碍(PND)包括术后谵妄(POD)和术后认知功能障碍(POCD)。儿童和老年人是最易患 POD 和 POCD 的两个人群,这两种疾病会导致高发病率和高死亡率。与 POD 和 POCD 相关的因素很多,包括神经炎症和氧化应激。全身麻醉是 PND 的主要风险因素。然而,人们对 PNDs 的分子机制知之甚少。右美托咪定(DEX)是一种有效的镇静剂,具有镇痛特性,可显著改善老年患者的 POCD。在这篇综述中,总结了目前对 PNDs 麻醉和 DEX 保护作用的理解,并进一步讨论了其潜在机制。
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引用次数: 0
Astrocytic pyruvate dehydrogenase kinase-lactic acid axis involvement in glia-neuron crosstalk contributes to morphine-induced hyperalgesia in mice 星形胶质细胞丙酮酸脱氢酶激酶-乳酸轴参与胶质细胞-神经元串扰导致小鼠吗啡诱导的痛觉过敏
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-07-01 DOI: 10.1016/j.fmre.2023.02.013

The activation of spinal astrocytes accounts for opioid-induced hyperalgesia (OIH), but the underlying mechanisms remain elusive. The presence of astrocyte-neuron lactate shuttle (ANLS) makes astrocytes necessary for some neural function and communication. The aim of this study was to explore the role of ANLS in the occurrence and maintenance of OIH. After 7 days consecutive morphine injection, a mice OIH model was established and astrocytic pyruvate dehydrogenase kinase 4 (PDK4), phosphorylated pyruvate dehydrogenase (p-PDH) and accumulation of L-lactate was elevated in the spinal dorsal horn. Intrathecally administration of inhibitors of PDK, lactate dehydrogenase 5 and monocarboxylate transporters to decrease the supply of L-lactate on neurons was observed to attenuate hypersensitivity behaviors induced by repeated morphine administration and downregulate the expression of markers of central sensitization in the spinal dorsal horns. The astrocyte line and the neuronal line were co-cultured to investigate the mechanisms in vitro. In this study, we demonstrated that morphine-induced hyperalgesia was sustained by lactate overload consequent upon aberrant function of spinal ANLS. In this process, PDK-p-PDH-lactate axis serves a pivotal role, which might therefore be a new target to improve long-term opioid treatment strategy in clinical practice.

脊髓星形胶质细胞的激活是阿片类药物诱导的痛觉减退(OIH)的原因,但其潜在机制仍难以捉摸。星形胶质细胞-神经元乳酸穿梭(ANLS)的存在使星形胶质细胞成为某些神经功能和交流的必要条件。本研究旨在探讨ANLS在OIH发生和维持中的作用。连续注射吗啡 7 天后,建立了小鼠 OIH 模型,发现脊髓背角的星形胶质细胞丙酮酸脱氢酶激酶 4(PDK4)、磷酸化丙酮酸脱氢酶(p-PDH)和 L-乳酸的积累均升高。经皮下注射 PDK、乳酸脱氢酶 5 和单羧酸盐转运体抑制剂以减少神经元中 L-乳酸盐的供应,可减轻反复注射吗啡引起的超敏行为,并下调脊髓背角中枢敏化标志物的表达。我们将星形胶质细胞系和神经元系共同培养,以研究体外机制。在这项研究中,我们证明了吗啡诱导的痛觉减退是由于乳酸超载导致脊髓ANLS功能异常而持续的。在这一过程中,PDK-p-PDH-乳酸轴发挥了关键作用,因此可能成为临床上改善阿片类药物长期治疗策略的新靶点。
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引用次数: 0
Generating barcodes for nanopore sequencing data with PRO 用 PRO 生成纳米孔测序数据的条形码
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-07-01 DOI: 10.1016/j.fmre.2024.04.014

DNA barcodes, short and unique DNA sequences, play a crucial role in sample identification when processing many samples simultaneously, which helps reduce experimental costs. Nevertheless, the low quality of long-read sequencing makes it difficult to identify barcodes accurately, which poses significant challenges for the design of barcodes for large numbers of samples in a single sequencing run. Here, we present a comprehensive study of the generation of barcodes and develop a tool, PRO, that can be used for selecting optimal barcode sets and demultiplexing. We formulate the barcode design problem as a combinatorial problem and prove that finding the optimal largest barcode set in a given DNA sequence space in which all sequences have the same length is theoretically NP-complete. For practical applications, we developed the novel method PRO by introducing the probability divergence between two DNA sequences to expand the capacity of barcode kits while ensuring demultiplexing accuracy. Specifically, the maximum size of the barcode kits designed by PRO is 2,292, which keeps the length of barcodes the same as that of the official ones used by Oxford Nanopore Technologies (ONT). We validated the performance of PRO on a simulated nanopore dataset with high error rates. The demultiplexing accuracy of PRO reached 98.29% for a barcode kit of size 2,922, 4.31% higher than that of Guppy, the official demultiplexing tool. When the size of the barcode kit generated by PRO is the same as the official size provided by ONT, both tools show superior and comparable demultiplexing accuracy.

DNA 条形码是一种简短而独特的 DNA 序列,在同时处理许多样本时对样本识别起着至关重要的作用,有助于降低实验成本。然而,由于长读程测序的质量较低,很难准确识别条形码,这给在一次测序中为大量样本设计条形码带来了巨大挑战。在此,我们对条形码的生成进行了全面研究,并开发了一种可用于选择最佳条形码集和解复用的工具 PRO。我们将条形码设计问题表述为一个组合问题,并证明在所有序列长度相同的给定 DNA 序列空间中寻找最优的最大条形码集在理论上是 NP-完全的。在实际应用中,我们开发了新方法 PRO,通过引入两个 DNA 序列之间的概率发散,在确保解复用精度的同时扩大了条形码套件的容量。具体来说,PRO 所设计的条形码试剂盒的最大尺寸为 2292,与牛津纳米孔技术公司(ONT)正式使用的条形码长度相同。我们在误差率较高的模拟纳米孔数据集上验证了 PRO 的性能。在条形码大小为 2,922 的情况下,PRO 的解复用准确率达到 98.29%,比官方解复用工具 Guppy 高出 4.31%。当 PRO 生成的条形码工具包大小与 ONT 提供的官方大小相同时,两种工具的解复用准确率都很高,不相上下。
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引用次数: 0
Ultra-efficient and parameter-free computation of submicron thermal transport with phonon Boltzmann transport equation 基于声子玻尔兹曼输运方程的亚微米热输运超高效无参数计算
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-07-01 DOI: 10.1016/j.fmre.2022.06.007

Understanding thermal transport at the submicron scale is crucial for engineering applications, especially in the thermal management of electronics and tailoring the thermal conductivity of thermoelectric materials. At the submicron scale, the macroscopic heat diffusion equation is no longer valid and the phonon Boltzmann transport equation (BTE) becomes the governing equation for thermal transport. However, previous thermal simulations based on the phonon BTE have two main limitations: relying on empirical parameters and prohibitive computational costs. Therefore, the phonon BTE is commonly used for qualitatively studying the non-Fourier thermal transport phenomena of toy problems. In this work, we demonstrate an ultra-efficient and parameter-free computational method of the phonon BTE to achieve quantitatively accurate thermal simulation for realistic materials and devices. By properly integrating the phonon properties from first-principles calculations, our method does not rely on empirical material properties input. It can be generally applicable for different materials and the predicted results can match well with experimental results. Moreover, by developing a suitable ensemble of advanced numerical algorithms, our method exhibits superior numerical efficiency. The full-scale (from ballistic to diffusive) thermal simulation of a 3-dimensional fin field-effect transistor with 13 million degrees of freedom, which is prohibitive for existing phonon BTE solvers even on supercomputers, can now be completed within two hours on a single personal computer. Our method makes it possible to achieve the predictive design of realistic nanostructures for the desired thermal conductivity. It also enables accurately resolving the temperature profiles at the transistor level, which helps in better understanding the self-heating effect of electronics.

了解亚微米尺度的热传输对于工程应用至关重要,尤其是在电子设备的热管理和热电材料的热导率定制方面。在亚微米尺度上,宏观热扩散方程不再有效,声子玻尔兹曼输运方程(BTE)成为热输运的支配方程。然而,以往基于声子 BTE 的热模拟有两个主要局限:依赖经验参数和过高的计算成本。因此,声子 BTE 通常用于定性研究玩具问题的非傅里叶热传输现象。在这项工作中,我们展示了一种超高效、无参数的声子 BTE 计算方法,以实现对现实材料和器件的定量精确热模拟。通过对第一原理计算中的声子特性进行适当积分,我们的方法不依赖于经验材料特性输入。它可以普遍适用于不同的材料,而且预测结果与实验结果非常吻合。此外,通过开发合适的先进数值算法组合,我们的方法表现出卓越的数值效率。对具有 1,300 万个自由度的三维鳍式场效应晶体管进行全尺度(从弹道到扩散)热模拟,即使在超级计算机上也是现有声子 BTE 求解器无法完成的,而现在在一台个人计算机上只需两小时就能完成。我们的方法使预测性设计出所需热导率的现实纳米结构成为可能。它还能准确解析晶体管级的温度曲线,有助于更好地理解电子器件的自热效应。
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引用次数: 0
Ternary NiCoTi-layered double hydroxide nanosheets as a pH-responsive nanoagent for photodynamic/chemodynamic synergistic therapy 三元镍钴钛层双氢氧化物纳米片作为光动力/化学动力协同疗法的 pH 值响应型纳米试剂
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-07-01 DOI: 10.1016/j.fmre.2022.06.001

Combining photodynamic therapy (PDT) with chemodynamic therapy (CDT) has been proven to be a promising strategy to improve the treatment efficiency of cancer, because of the synergistic therapeutic effect arising between the two modalities. Herein, we report an inorganic nanoagent based on ternary NiCoTi-layered double hydroxide (NiCoTi-LDH) nanosheets to realize highly efficient photodynamic/chemodynamic synergistic therapy. The NiCoTi-LDH nanosheets exhibit oxygen vacancy-promoted electron-hole separation and photogenerated hole-induced O2-independent reactive oxygen species (ROS) generation under acidic circumstances, realizing in situ pH-responsive PDT. Moreover, due to the effective conversion between Co3+ and Co2+ caused by photogenerated electrons, the NiCoTi-LDH nanosheets catalyze the release of hydroxyl radicals (·OH) from H2O2 through Fenton reactions, resulting in CDT. Laser irradiation enhances the catalyzed ability of the NiCoTi-LDH nanosheets to promote the ROS generation, resulting in a better performance than TiO2 nanoparticles at pH 6.5. In vitro and in vivo experimental results show conclusively that NiCoTi-LDH nanosheets plus irradiation lead to efficient cell apoptosis and significant inhibition of tumor growth. This study reports a new pH-responsive inorganic nanoagent with oxygen vacancy-promoted photodynamic/chemodynamic synergistic performance, offering a potentially appealing clinical strategy for selective tumor elimination.

将光动力疗法(PDT)与化学动力疗法(CDT)相结合已被证明是提高癌症治疗效率的一种有前途的策略,因为这两种疗法之间会产生协同治疗效果。在此,我们报告了一种基于三元镍钴钛层状双氢氧化物(NiCoTi-LDH)纳米片的无机纳米试剂,以实现高效的光动力/化学动力协同治疗。镍钴钛层双氢氧化物纳米片在酸性环境下表现出氧空位促进的电子-空穴分离和光生空穴诱导的不依赖于活性氧(ROS)的O2生成,实现了原位pH响应型PDT。此外,由于光生电子引起的 Co3+ 和 Co2+ 之间的有效转换,NiCoTi-LDH 纳米片通过 Fenton 反应催化 H2O2 释放羟基自由基(-OH),从而产生 CDT。激光照射增强了镍钴钛-LDH 纳米片促进 ROS 生成的催化能力,因此在 pH 值为 6.5 时,其性能优于 TiO2 纳米颗粒。体外和体内实验结果表明,NiCoTi-LDH 纳米片加辐照能有效地导致细胞凋亡,并显著抑制肿瘤生长。这项研究报告了一种新型 pH 响应无机纳米试剂,它具有氧空位促进的光动力/化学动力协同性能,为选择性消除肿瘤提供了一种具有潜在吸引力的临床策略。
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引用次数: 0
Unveiling the critical role of TiO2-supported atomically dispersed Cu species for enhanced photofixation of N2 to nitrate 揭示TiO2支持的原子分散Cu物种在增强N2对硝酸盐的光固定中的关键作用
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-07-01 DOI: 10.1016/j.fmre.2022.05.025

Nitrate products are widely used in manufacturing as crucial raw materials and fertilizers. The traditional nitrate synthesis process involves high energy consumption and emission, thereby opposing the goals of zero-carbon emission and green chemistry. Thus, a sustainable roadmap for nitrate synthesis that uses green energy input, clean N sources, and direct catalytic processes is urgently required (e.g., developing a novel photosynthesis system). Here, we synthesized TiO2-supported atomically dispersed Cu species for N2 photofixation to nitrate in a flow reactor. The optimized photocatalyst yielded a high nitrate photosynthesis rate of 0.93 μmol h−1 and selectivity of ∼90%, which is superior to most of the values reported thus far. Further, experimental results and in-situ investigations revealed that the atomically dispersed Cu sites in the as-designed sample significantly enhanced the separation and transfer efficiency of photogenerated carriers, adsorption and activation of reactants, and the formation of chemisorbed NOx intermediates, thereby realizing the excellent photofixation of N2 to nitrate.

硝酸盐产品作为重要的原材料和肥料被广泛应用于制造业。传统的硝酸盐合成工艺能耗高、排放量大,与零碳排放和绿色化学的目标背道而驰。因此,利用绿色能源输入、清洁氮源和直接催化工艺(如开发新型光合作用系统)的可持续硝酸盐合成路线图亟待开发。在此,我们合成了二氧化钛(TiO2)支撑的原子分散铜物种,用于在流动反应器中将 N2 光固化为硝酸盐。优化后的光催化剂硝酸盐光合作用率高达 0.93 μmol h-1,选择性高达 90%,优于目前报道的大多数数值。此外,实验结果和原位研究表明,设计样品中原子分散的铜位点显著提高了光生载流子的分离和转移效率、反应物的吸附和活化以及化学吸附 NOx 中间产物的形成,从而实现了 N2 到硝酸盐的良好光固化。
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引用次数: 0
Quantifying the impacts of COVID-19 on Sustainable Development Goals using machine learning models 利用机器学习模型量化 COVID-19 对可持续发展目标的影响
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-07-01 DOI: 10.1016/j.fmre.2022.06.016

The COVID-19 pandemic has posed severe threats to global sustainable development. However, a comprehensive quantitative assessment of the impacts of COVID-19 on Sustainable Development Goals (SDGs) is still lacking. This research quantified the post-COVID-19 SDG progress from 2020 to 2024 using projected GDP growth and population and machine learning models including support vector machine, random forest, and extreme gradient boosting. The results show that the overall SDG performance declined by 7.7% in 2020 at the global scale, with 12 socioeconomic SDG performance decreasing by 3.0%–22.3% and 4 environmental SDG performance increasing by 1.6%–9.2%. By 2024, the progress of 12 SDGs will lag behind for one to eight years compared to their pre-COVID-19 trajectories, while extra time will be gained for 4 environment-related SDGs. Furthermore, the pandemic will cause more impacts on countries in emerging markets and developing economies than those on advanced economies, and the latter will recover more quickly to be closer to their pre-COVID-19 trajectories by 2024. Post-COVID-19 economic recovery should emphasize in areas that can help decouple economic growth from negative environmental impacts. The results can help government and non-state stakeholders identify critical areas for targeted policy to resume and speed up the progress to achieve SDGs by 2030.

COVID-19 大流行对全球可持续发展构成了严重威胁。然而,目前仍缺乏关于 COVID-19 对可持续发展目标(SDGs)影响的全面定量评估。本研究利用预测的 GDP 增长率和人口数量以及支持向量机、随机森林和极端梯度提升等机器学习模型,量化了 COVID-19 后 2020 年至 2024 年的可持续发展目标进展情况。结果显示,2020 年全球范围内可持续发展目标的总体绩效下降了 7.7%,其中 12 项社会经济可持续发展目标的绩效下降了 3.0%-22.3%,4 项环境可持续发展目标的绩效上升了 1.6%-9.2%。到 2024 年,12 个可持续发展目标的进展将比其在 COVID-19 前的轨迹落后 1 到 8 年,而 4 个与环境相关的可持续发展目标将获得额外的时间。此外,大流行病对新兴市场国家和发展中经济体的影响将大于对发达经济体的影响,而后者的恢复速度将更快,到 2024 年将更接近 COVID-19 前的轨迹。COVID-19 后的经济复苏应侧重于那些有助于使经济增长与负面环境影响脱钩的领域。研究结果可帮助政府和非国家利益相关者确定关键领域,制定有针对性的政策,以恢复和加快到 2030 年实现可持续发展目标的进程。
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引用次数: 0
An ensemble machine learning model to uncover potential sites of hazardous waste illegal dumping based on limited supervision experience 基于有限监管经验的危险废物非法倾倒潜在地点的集成机器学习模型
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-07-01 DOI: 10.1016/j.fmre.2023.06.010

With the soaring generation of hazardous waste (HW) during industrialization and urbanization, HW illegal dumping continues to be an intractable global issue. Particularly in developing regions with lax regulations, it has become a major source of soil and groundwater contamination. One dominant challenge for HW illegal dumping supervision is the invisibility of dumping sites, which makes HW illegal dumping difficult to be found, thereby causing a long-term adverse impact on the environment. How to utilize the limited historic supervision records to screen the potential dumping sites in the whole region is a key challenge to be addressed. In this study, a novel machine learning model based on the positive-unlabeled (PU) learning algorithm was proposed to resolve this problem through the ensemble method which could iteratively mine the features of limited historic cases. Validation of the random forest-based PU model showed that the predicted top 30% of high-risk areas could cover 68.1% of newly reported cases in the studied region, indicating the reliability of the model prediction. This novel framework will also be promising in other environmental management scenarios to deal with numerous unknown samples based on limited prior experience.

随着工业化和城市化进程中有害废物(HW)产生量的激增,非法倾倒有害废物仍然是一个棘手的全球性问题。特别是在监管不严的发展中地区,它已成为土壤和地下水污染的主要来源。有害废弃物非法倾倒监管面临的一个主要挑战是倾倒地点的隐蔽性,这使得有害废弃物非法倾倒难以被发现,从而对环境造成长期的不利影响。如何利用有限的历史监管记录来筛选整个区域的潜在倾倒点,是亟待解决的关键难题。本研究提出了一种基于正向无标记(PU)学习算法的新型机器学习模型,通过迭代挖掘有限历史案例特征的集合方法来解决这一问题。对基于随机森林的 PU 模型的验证表明,预测出的前 30% 高风险地区可覆盖研究地区新报告病例的 68.1%,表明该模型预测的可靠性。这种新颖的框架在其他环境管理场景中也将大有可为,可以根据有限的以往经验处理大量未知样本。
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引用次数: 0
Effect of inlet elbow on rotation stall in waterjet propulsion pump 进口弯头对喷水推进泵旋转失速的影响
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-07-01 DOI: 10.1016/j.fmre.2022.05.029

To study the influence of an elbow inlet on the rotating stall characteristics of a waterjet propulsion pump (WJPP), a three-dimensional internal flow field in a WJPP under a straight-pipe inlet and elbow inlet is numerically simulated. By comparing the hydraulic performance of WJPP under the two inlet conditions, the internal relationship between the inlet mode and the flow pattern in the pump is clarified. Based on unsteady pressure fluctuation characteristics and wavelet analysis, the influence of the inlet mode on the rotating stall is revealed, and the stall transient propagation characteristics under critical stall conditions are analyzed. The disturbance effects of the inlet channel geometry disappear under low flow rate conditions, the main disturbance is induced by the high-speed countercurrent, and the flow pattern under the elbow inlet is better than that under the straight-pipe inlet. Under the straight-pipe inlet, the single-stall nucleus in the WJPP temporarily experiences a low-frequency and high-amplitude disturbance, which subsequently transforms into a mode of multi-stall nuclei with high-frequency circumferential disturbance. Under the elbow inlet, the rotating stall always maintains a mode of high-amplitude and low-frequency disturbance, which represents the transient characteristics of a single stall core propagating in the circumferential direction inside the channel. The results of this study have a reference value for structural design optimization in a WJPP.

为了研究弯头进水口对水喷射推进泵(WJPP)旋转失速特性的影响,对直管进水口和弯头进水口条件下 WJPP 的三维内部流场进行了数值模拟。通过比较两种入口条件下 WJPP 的水力性能,阐明了入口模式与泵内流动模式之间的内在关系。基于非稳态压力波动特性和小波分析,揭示了入口模式对旋转失速的影响,并分析了临界失速条件下的失速瞬态传播特性。在低流速条件下,入口通道几何形状的扰动效应消失,主要扰动由高速逆流引起,弯头入口下的流动模式优于直管入口下的流动模式。在直管入口下,WJPP 中的单滞流核暂时受到低频高振幅扰动,随后转变为具有高频圆周扰动的多滞流核模式。在弯头进水口下,旋转滞流始终保持高振幅低频扰动模式,这代表了单个滞流核在通道内沿圆周方向传播的瞬态特征。该研究结果对 WJPP 的结构设计优化具有参考价值。
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引用次数: 0
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