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Laboratory studies on the infectivity of human respiratory viruses: Experimental conditions, detections, and resistance to the atmospheric environment 人类呼吸道病毒传染性的实验室研究:实验条件、检测和对大气环境的抵抗力
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-05-01 DOI: 10.1016/j.fmre.2023.12.017
Yaohao Hu , Shuyi Peng , Bojiang Su , Tao Wang , Juying Lin , Wei Sun , Xiaodong Hu , Guohua Zhang , Xinming Wang , Ping'an Peng , Xinhui Bi

The environmental stability of infectious viruses in the laboratory setting is crucial to the transmission potential of human respiratory viruses. Different experimental techniques or conditions used in studies over the past decades have led to diverse understandings and predictions for the stability of viral infectivity in the atmospheric environment. In this paper, we review the current knowledge on the effect of simulated atmospheric conditions on the infectivity of respiratory viruses, mainly focusing on influenza viruses and coronaviruses, including severe acute respiratory syndrome coronavirus 2 and Middle East respiratory syndrome coronavirus. First, we summarize the impact of the experimental conditions on viral stability; these involve the methods of viral aerosol generation, storage during aging and collection, the virus types and strains, the suspension matrixes, the initial inoculum volumes and concentrations, and the drying process. Second, we summarize and discuss the detection methods of viral infectivity and their disadvantages. Finally, we integrate the results from the reviewed studies to obtain an overall understanding of the effects of atmospheric environmental conditions on the decay of infectious viruses, especially aerosolized viruses. Overall, this review highlights the knowledge gaps in predicting the ability of viruses to maintain infectivity during airborne transmission.

实验室环境中传染性病毒的环境稳定性对人类呼吸道病毒的传播潜力至关重要。在过去几十年的研究中,不同的实验技术或条件导致了对大气环境中病毒传染性稳定性的不同理解和预测。本文主要针对流感病毒和冠状病毒(包括严重急性呼吸系统综合征冠状病毒 2 和中东呼吸系统综合征冠状病毒),综述了模拟大气环境对呼吸道病毒感染性影响的现有知识。首先,我们总结了实验条件对病毒稳定性的影响;这些条件涉及病毒气溶胶的产生方法、老化和收集期间的储存方法、病毒类型和毒株、悬浮基质、初始接种量和浓度以及干燥过程。其次,我们总结并讨论了病毒传染性的检测方法及其缺点。最后,我们将综述研究的结果进行整合,以全面了解大气环境条件对传染性病毒(尤其是气溶胶病毒)衰变的影响。总之,本综述强调了在预测病毒在空气传播过程中保持感染性的能力方面存在的知识空白。
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引用次数: 0
A commentary of “Discovery of an extremely narrow jet and 10 teraelectronvolt photons from the brightest-of-all-time gamma-ray burst”: Top 10 Scientific Advances of 2023, China 关于 "发现史上最亮伽玛射线暴的极窄射流和10太电子伏特光子 "的评论:2023年中国十大科学进展
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-05-01 DOI: 10.1016/j.fmre.2024.03.011
Renxin Xu
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引用次数: 0
A commentary of “Mechanism of alkaline tolerance and application in crop improvement”: Top 10 Chinese Scientific Advances of 2023, China 耐碱性机理及在作物改良中的应用 "评论:2023年中国十大科学进展
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-05-01 DOI: 10.1016/j.fmre.2024.03.012
Yujuan Zhu , Sanwen Huang
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引用次数: 0
A commentary of “Prolonging the lifetime of logic qubits by Bosonic error-correcting code —realizing the break-even point of quantum error correction”: Top 10 Scientific Advances of 2023, China 关于 "利用玻色纠错码延长逻辑量子比特寿命--实现量子纠错的盈亏平衡点 "的评论:2023 年中国十大科学进展
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-05-01 DOI: 10.1016/j.fmre.2024.03.013
Gui-Lu Long
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引用次数: 0
Ambient particle composition and toxicity in 31 major cities in China 中国31个主要城市的环境颗粒物组成和毒性
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-05-01 DOI: 10.1016/j.fmre.2022.10.004
Lu Zhang, Maosheng Yao

Current assessment of air quality or control effectiveness is solely based on particulate matter (PM) mass levels, without considering their toxicity differences in terms of health benefits. Here, we collected a total of 465 automobile air conditioning filters from 31 major Chinese cities to study the composition and toxicity of PM at a national scale. Dithiothreitol assay showed that normalized PM toxicity (NIOG) in different Chinese cities varied greatly from the highest 4.99 × 10−3 for Changsha to the lowest 7.72 × 10−4 for Yinchuan. NIOG values were observed to have significant correlations with annual PM10 concentration (r = -0.416, p = 0.020) and some PM components (total fungi, SO42− and calcium element). The concentrations of different elements and water-soluble ions in PM also varied by several orders of magnitude for 31 cities in China. Endotoxin concentrations in PM analyzed using limulus amebocyte lysate assay ranged from 2.88 EU/mg PM (Hangzhou) to 62.82 EU/mg PM (Shijiazhuang) among 31 Chinese cities. Besides, real-time qPCR revealed 10∼100-fold differences in total bacterial and fungal levels among 31 Chinese cities. The concentrations of chemical (water soluble ions and trace elements) and biological (fungi, bacteria and endotoxin) components in PM were found to be significantly correlated with some meteorological factors and gaseous pollutants such as SO2. Our results have demonstrated that PM toxicity from 31 major cities varied greatly up to 6.5 times difference; and components such as fungi and SO42− in PM could play important roles in the observed PM toxicity. The city-specific air pollution control strategy that integrates toxicity factors should be enacted in order to maximize health and economic co-benefits. This work also provides a comprehensive view on the overall PM pollution situation in China.

目前对空气质量或控制效果的评估仅仅基于颗粒物(PM)的质量水平,而没有考虑其在健康益处方面的毒性差异。在此,我们收集了中国 31 个主要城市的 465 个汽车空调滤清器,在全国范围内研究可吸入颗粒物的成分和毒性。二硫苏糖醇测定显示,中国不同城市的归一化可吸入颗粒物毒性(NIOG)差异很大,最高为长沙的 4.99 × 10-3,最低为银川的 7.72 × 10-4。据观察,NIOG 值与 PM10 年浓度(r = -0.416,p = 0.020)和一些 PM 成分(总真菌、SO42- 和钙元素)有显著相关性。在中国的 31 个城市中,可吸入颗粒物中不同元素和水溶性离子的浓度也相差几个数量级。在中国的 31 个城市中,使用石灰质卵母细胞裂解液检测法分析的可吸入颗粒物中的内毒素浓度从 2.88 欧盟/毫克可吸入颗粒物(杭州)到 62.82 欧盟/毫克可吸入颗粒物(石家庄)不等。此外,实时 qPCR 显示,中国 31 个城市的细菌和真菌总含量相差 10∼100 倍。研究发现,可吸入颗粒物中的化学成分(水溶性离子和微量元素)和生物成分(真菌、细菌和内毒素)的浓度与一些气象因素和气态污染物(如二氧化硫)显著相关。我们的研究结果表明,31 个主要城市的可吸入颗粒物毒性差异很大,最高可达 6.5 倍的差异;可吸入颗粒物中的真菌和 SO42- 等成分可能在观察到的可吸入颗粒物毒性中发挥重要作用。应制定综合毒性因素的城市空气污染控制策略,以实现健康和经济效益的最大化。这项工作还提供了对中国整体可吸入颗粒物污染状况的全面看法。
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引用次数: 0
COVID-19 transmission and control in land public transport: A literature review 陆地公共交通中 COVID-19 的传播和控制:文献综述
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-05-01 DOI: 10.1016/j.fmre.2023.10.013
Qiqi Luo , Wenbing Liu , Jiayuan Liao , Zhongli Gu , Xiaodan Fan , Zhiwen Luo , Xuelin Zhang , Jian Hang , Cuiyun Ou

Land public transport is an important link within and between cities, and how to control the transmission of COVID-19 in land public transport is a critical issue in our daily lives. However, there are still many inconsistent opinions and views about the spread of SARS-CoV-2 in land public transport, which limits our ability to implement effective interventions. The purpose of this review is to overview the literature on transmission characteristics and routes of the epidemic in land public transport, as well as to investigate factors affecting its spread and provide feasible measures to mitigate the infection risk of passengers. We obtained 898 papers by searching the Web of Science, Pubmed, and WHO global COVID database by keywords, and finally selected 45 papers that can address the purpose of this review. Land public transport is a high outbreak area for COVID-19 due to characteristics like crowding, inadequate ventilation, long exposure time, and environmental closure. Different from surface touch transmission and drop spray transmission, aerosol inhalation transmission can occur not only in short distances but also in long distances. Insufficient ventilation is the most important factor influencing long-distance aerosol transmission. Other transmission factors (e.g., interpersonal distance, relative orientation, and ambient conditions) should be noticed as well, which have been summarized in this paper. To address various influencing factors, it is essential to suggest practical and efficient preventive measures. Among these, increased ventilation, particularly the fresh air (i.e., natural ventilation), has proven to effectively reduce indoor infection risk. Many preventive measures are also effective, such as enlarging social distance, avoiding face-to-face orientation, setting up physical partitions, disinfection, avoiding talking, and so on. As research on the epidemic has intensified, people have broken down many perceived barriers, but more comprehensive studies on monitoring systems and prevention measures in land public transport are still needed.

陆路公共交通是连接城市内部和城市之间的重要纽带,如何控制 COVID-19 在陆路公共交通中的传播是我们日常生活中的一个关键问题。然而,关于 SARS-CoV-2 在陆路公共交通中的传播,目前仍存在许多不一致的观点和看法,这限制了我们实施有效干预措施的能力。本综述旨在综述有关陆地公共交通中该流行病的传播特点和传播途径的文献,研究影响其传播的因素,并为降低乘客的感染风险提供可行的措施。我们通过关键词检索 Web of Science、Pubmed 和世界卫生组织全球 COVID 数据库,共获得 898 篇论文,最终筛选出 45 篇能够达到本综述目的的论文。由于拥挤、通风不足、暴露时间长、环境封闭等特点,陆地公共交通工具是 COVID-19 的高发区。与表面接触传播和滴喷传播不同,气溶胶吸入传播不仅可在短距离内发生,也可在长距离内发生。通风不足是影响气溶胶远距离传播的最重要因素。其他传播因素(如人际距离、相对方向和环境条件)也应引起注意,本文对此进行了总结。针对各种影响因素,有必要提出切实有效的预防措施。其中,加强通风,尤其是新鲜空气(即自然通风),已被证明能有效降低室内感染风险。许多预防措施也是有效的,如扩大社交距离、避免面对面、设置物理隔断、消毒、避免交谈等。随着疫情研究的深入,人们已经打破了许多认知障碍,但仍需对陆地公共交通的监测系统和预防措施进行更全面的研究。
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引用次数: 0
An efficient labeled memory system for learned indexes 用于学习索引的高效标记记忆系统
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-05-01 DOI: 10.1016/j.fmre.2022.05.016
Yuxuan Mo, Jingnan Jia, Pengfei Li, Yu Hua

The appearance and wide use of memory hardware bring significant changes to the conventional vertical memory hierarchy that fails to handle contentions for shared hardware resources and expensive data movements. To deal with these problems, existing schemes have to rely on inefficient scheduling strategies that also cause extra temporal, spatial and bandwidth overheads. Based on the insights that the shared hardware resources trend to be uniformly and hierarchically offered to the requests for co-located applications in memory systems, we present an efficient abstraction of memory hierarchies, called Label, which is used to establish the connection between the application layer and underlying hardware layer. Based on labels, our paper proposes LaMem, a labeled, resource-isolated and cross-tiered memory system by leveraging the way-based partitioning technique for shared resources to guarantee QoS demands of applications, while supporting fast and low-overhead cache repartitioning technique. Besides, we customize LaMem for the learned index that fundamentally replaces storage structures with computation models as a case study to verify the applicability of LaMem. Experimental results demonstrate the efficiency and efficacy of LaMem.

内存硬件的出现和广泛使用给传统的垂直内存层次结构带来了重大变化,这种层次结构无法处理共享硬件资源的争夺和昂贵的数据移动。为了解决这些问题,现有方案不得不依赖低效的调度策略,这也会造成额外的时间、空间和带宽开销。基于对共享硬件资源趋势的洞察,我们提出了一种高效的内存分层抽象,称为标签(Label),用于建立应用层与底层硬件层之间的联系。基于标签,我们的论文提出了 LaMem--一种标签化、资源隔离和跨层级的内存系统,它利用基于方式的共享资源分区技术来保证应用程序的 QoS 需求,同时支持快速、低开销的缓存重新分区技术。实验结果证明了 LaMem 的效率和功效。
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引用次数: 0
Avian influenza and gut microbiome in poultry and humans: A “One Health” perspective 禽流感与家禽和人类的肠道微生物群:统一健康 "视角
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-05-01 DOI: 10.1016/j.fmre.2023.10.016
Ling Zhang , Erkai Zhou , Ce Liu , Xiaoyu Tian , Baode Xue , Kai Zhang , Bin Luo

A gradual increase in avian influenza outbreaks has been found in recent years. It is highly possible to trigger the next human pandemic due to the characteristics of antigenic drift and antigenic shift in avian influenza virus (AIV). Although great improvements in understanding influenza viruses and the associated diseases have been unraveled, our knowledge of how these viruses impact the gut microbiome of both poultry and humans, as well as the underlying mechanisms, is still improving. The “One Health” approach shows better vitality in monitoring and mitigating the risk of avian influenza, which requires a multi-sectoral effort and highlights the interconnection of human health with environmental sustainability and animal health. Therefore, monitoring the gut microbiome may serve as a sentinel for protecting the common health of the environment, animals, and humans. This review summarizes the interactions between AIV infection and the gut microbiome of poultry and humans and their potential mechanisms. With the presented suggestions, we hope to address the current major challenges in the surveillance and prevention of microbiome-related avian influenza with the “One Health” approach.

近年来,禽流感疫情逐渐增多。由于禽流感病毒(AIV)具有抗原漂移和抗原转变的特点,因此极有可能引发下一次人类大流行。尽管人们对流感病毒及其相关疾病的认识有了很大提高,但我们对这些病毒如何影响家禽和人类肠道微生物群及其内在机制的了解仍在不断加深。在监测和降低禽流感风险方面,"同一健康 "方法显示出更好的生命力,这需要多部门的努力,并突出了人类健康与环境可持续性和动物健康之间的相互联系。因此,监测肠道微生物组可作为保护环境、动物和人类共同健康的哨兵。本综述总结了禽流感病毒感染与家禽和人类肠道微生物组之间的相互作用及其潜在机制。我们希望通过本文提出的建议,以 "一体健康 "的方法应对当前在监测和预防与微生物相关的禽流感方面所面临的主要挑战。
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引用次数: 0
Ternary superconducting hydrides stabilized via Th and Ce elements at mild pressures 三元超导氢化物稳定通过Th和Ce元素在温和的压力
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-05-01 DOI: 10.1016/j.fmre.2022.11.010
Qiwen Jiang , Zihan Zhang , Hao Song , Yanbin Ma , Yuanhui Sun , Maosheng Miao , Tian Cui , Defang Duan

The discovery of covalent H3S and clathrate structure LaH10 with excellent superconducting critical temperatures at high pressures has facilitated a multitude of research on compressed hydrides. However, their superconducting pressures are too high (generally above 150 GPa), thereby hindering their application. In addition, making room-temperature superconductivity close to ambient pressure in hydrogen-based superconductors is challenging. In this work, we calculated the chemically “pre-compressed” Be-H by heavy metals Th and Ce to stabilize the superconducting phase near ambient pressure. An unprecedented ThBeH8 (CeBeH8) with a “fluorite-type” structure was predicted to be thermodynamically stable above 69 GPa (76 GPa), yielding a Tc of 113 K (28 K) decompressed to 7 GPa (13 GPa) by solving the anisotropic Migdal–Eliashberg equations. Be-H vibrations play a vital role in electron–phonon coupling and structural stability of these ternary hydrides. Our results will guide further experiments toward synthesizing ternary hydride superconductors at mild pressures.

共价 H3S 和凝块结构 LaH10 在高压下具有极佳的超导临界温度,它们的发现促进了对压缩氢化物的大量研究。然而,它们的超导压力过高(一般超过 150 GPa),从而阻碍了它们的应用。此外,在氢基超导体中实现接近环境压力的室温超导也具有挑战性。在这项工作中,我们计算了重金属 Th 和 Ce 对 Be-H 的化学 "预压缩",以稳定接近环境压力的超导相。通过求解各向异性的 Migdal-Eliashberg 方程,我们预测具有 "萤石型 "结构的前所未有的 ThBeH8(CeBeH8)在 69 GPa(76 GPa)以上具有热力学稳定性,其 Tc 为 113 K(28 K),减压至 7 GPa(13 GPa)。Be-H 振荡在这些三元氢化物的电子-声子耦合和结构稳定性方面发挥了重要作用。我们的研究结果将为在温和压力下合成三元氢化物超导体的进一步实验提供指导。
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引用次数: 0
A globally shared resource paradigm for encoded storage systems in the public cloud 公共云中编码存储系统的全球共享资源范式
IF 6.2 3区 综合性期刊 Q1 Multidisciplinary Pub Date : 2024-05-01 DOI: 10.1016/j.fmre.2022.12.011
Zhiyue Li , Guangyan Zhang

Public clouds favor sharing of storage resources, in which many tenants acquire bandwidth and storage capacity from a shared storage pool. To provide high availability, data are often encoded to provide fault tolerance with low storage costs. Regarding this, efficiently organizing an encoded storage system for shared I/Os is critical for application performance. This is usually hard to achieve as different applications have different stripe configurations and fault tolerance levels. In this paper, we first study the block trace from the Alibaba cloud, and find that I/O patterns of modern applications prefer the resource sharing scheme. Based on this, we propose a globally shared resource paradigm for encoded storage system in the public cloud. The globally shared resource paradigm can provide balanced load and fault tolerance for numerous disk pool sizes and arbitrary application stripe configurations. Furthermore, we demonstrate with two case studies that our theory can help address the device-specific problems of HDD and SSD RAID arrays with slight modifications: comparing the existing resource partition and resource sharing methods, our theory can promote the rebuild speed of the HDD RAID arrays by 2.5×, and reduce the P99 tail latency of the SSD arrays by up to two orders of magnitude.

公共云有利于共享存储资源,许多租户可从共享存储池中获取带宽和存储容量。为了提供高可用性,通常会对数据进行编码,以便以较低的存储成本实现容错。因此,有效组织共享 I/O 的编码存储系统对应用性能至关重要。这通常很难实现,因为不同的应用具有不同的条带配置和容错级别。在本文中,我们首先研究了阿里巴巴云的块跟踪,发现现代应用的 I/O 模式更喜欢资源共享方案。在此基础上,我们提出了公有云中编码存储系统的全局共享资源范式。全局共享资源范例可为众多磁盘池大小和任意应用条带配置提供均衡负载和容错。此外,我们还通过两个案例研究证明,我们的理论只需稍加修改,就能帮助解决硬盘和固态硬盘 RAID 阵列的特定设备问题:与现有的资源分区和资源共享方法相比,我们的理论能将硬盘 RAID 阵列的重建速度提高 2.5 倍,将固态硬盘阵列的 P99 尾部延迟降低两个数量级。
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引用次数: 0
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