首页 > 最新文献

Results and Problems in Cell Differentiation最新文献

英文 中文
Airineme-Mediated Intercellular Communication. 以空气介质为媒介的细胞间通信
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1007/978-3-031-62036-2_7
Dae Seok Eom

Intercellular communication is indispensable across multicellular organisms, and any aberration in this process can give rise to significant anomalies in developmental and homeostatic processes. Thus, a comprehensive understanding of its mechanisms is imperative for addressing human health-related concerns. Recent advances have expanded our understanding of intercellular communication by elucidating additional signaling modalities alongside established mechanisms. Notably, cellular protrusion-mediated long-range communication, characterized by physical contact through thin and elongated cellular protrusions between cells involved in signal transmission and reception, has emerged as a significant intercellular signaling paradigm. This chapter delves into the exploration of a signaling cellular protrusion termed 'airinemes,' discovered in the zebrafish skin. It covers their identified signaling roles and the cellular and molecular mechanisms that underpin their functionality.

在多细胞生物体中,细胞间通信是不可或缺的,这一过程中的任何异常都可能导致发育和平衡过程出现重大异常。因此,全面了解其机制对于解决人类健康相关问题至关重要。最近的研究进展除了阐明已确立的机制外,还阐明了更多的信号模式,从而扩展了我们对细胞间通信的理解。值得注意的是,细胞突起介导的长程通讯已成为一种重要的细胞间信号传递模式,其特点是参与信号传递和接收的细胞之间通过细长的细胞突起进行物理接触。本章将深入探讨在斑马鱼皮肤中发现的一种被称为 "气膜 "的信号细胞突起。内容包括已确定的信号作用以及支持其功能的细胞和分子机制。
{"title":"Airineme-Mediated Intercellular Communication.","authors":"Dae Seok Eom","doi":"10.1007/978-3-031-62036-2_7","DOIUrl":"10.1007/978-3-031-62036-2_7","url":null,"abstract":"<p><p>Intercellular communication is indispensable across multicellular organisms, and any aberration in this process can give rise to significant anomalies in developmental and homeostatic processes. Thus, a comprehensive understanding of its mechanisms is imperative for addressing human health-related concerns. Recent advances have expanded our understanding of intercellular communication by elucidating additional signaling modalities alongside established mechanisms. Notably, cellular protrusion-mediated long-range communication, characterized by physical contact through thin and elongated cellular protrusions between cells involved in signal transmission and reception, has emerged as a significant intercellular signaling paradigm. This chapter delves into the exploration of a signaling cellular protrusion termed 'airinemes,' discovered in the zebrafish skin. It covers their identified signaling roles and the cellular and molecular mechanisms that underpin their functionality.</p>","PeriodicalId":39320,"journal":{"name":"Results and Problems in Cell Differentiation","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142146500","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Orchestrating Blood Flow in the Retina: Interpericyte Tunnelling Nanotube Communication. 协调视网膜中的血流:膜间隧道纳米管通信
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1007/978-3-031-62036-2_11
Hannah McDonald, Jesse Gardner-Russell, Luis Alarcon-Martinez

The retina transforms light into electrical signals, which are sent to the brain via the optic nerve to form our visual perception. This complex signal processing is performed by the retinal neuron and requires a significant amount of energy. Since neurons are unable to store energy, they must obtain glucose and oxygen from the bloodstream to produce energy to match metabolic needs. This process is called neurovascular coupling (NVC), and it is based on a precise mechanism that is not totally understood. The discovery of fine tubular processes termed tunnelling nanotubes (TNTs) set a new type of cell-to-cell communication. TNTs are extensions of the cellular membrane that allow the transfer of material between connected cells. Recently, they have been reported in the brain and retina of living mice, where they connect pericytes, which are vascular mural cells that regulate vessel diameter. Accordingly, these TNTs were termed interpericyte tunnelling nanotubes (IPTNTs), which showed a vital role in blood delivery and NVC. In this chapter, we review the involvement of TNTs in NVC and discuss their implications in retinal neurodegeneration.

视网膜将光线转化为电信号,通过视神经发送到大脑,形成我们的视觉感知。这种复杂的信号处理由视网膜神经元完成,需要大量的能量。由于神经元无法储存能量,它们必须从血液中获取葡萄糖和氧气来产生能量,以满足新陈代谢的需要。这一过程被称为神经血管耦合(NVC),其精确机制尚未完全明了。被称为隧道纳米管(TNTs)的细管过程的发现开创了一种新型的细胞间通信方式。TNTs 是细胞膜的延伸,可以在相连的细胞之间传输物质。最近,在活体小鼠的大脑和视网膜中发现了TNTs,它们连接着血管壁细胞周细胞,这些细胞负责调节血管直径。因此,这些 TNT 被称为 "周细胞间隧道纳米管(IPTNT)",在血液输送和 NVC 中发挥着重要作用。在本章中,我们将回顾 TNTs 在视网膜神经变性中的参与,并讨论它们在视网膜神经变性中的意义。
{"title":"Orchestrating Blood Flow in the Retina: Interpericyte Tunnelling Nanotube Communication.","authors":"Hannah McDonald, Jesse Gardner-Russell, Luis Alarcon-Martinez","doi":"10.1007/978-3-031-62036-2_11","DOIUrl":"10.1007/978-3-031-62036-2_11","url":null,"abstract":"<p><p>The retina transforms light into electrical signals, which are sent to the brain via the optic nerve to form our visual perception. This complex signal processing is performed by the retinal neuron and requires a significant amount of energy. Since neurons are unable to store energy, they must obtain glucose and oxygen from the bloodstream to produce energy to match metabolic needs. This process is called neurovascular coupling (NVC), and it is based on a precise mechanism that is not totally understood. The discovery of fine tubular processes termed tunnelling nanotubes (TNTs) set a new type of cell-to-cell communication. TNTs are extensions of the cellular membrane that allow the transfer of material between connected cells. Recently, they have been reported in the brain and retina of living mice, where they connect pericytes, which are vascular mural cells that regulate vessel diameter. Accordingly, these TNTs were termed interpericyte tunnelling nanotubes (IPTNTs), which showed a vital role in blood delivery and NVC. In this chapter, we review the involvement of TNTs in NVC and discuss their implications in retinal neurodegeneration.</p>","PeriodicalId":39320,"journal":{"name":"Results and Problems in Cell Differentiation","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142146512","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Monocytes/Macrophages in Helminth Infections: Key Players in Host Defence, Inflammation, and Tissue Repair. 螺旋体感染中的单核细胞/巨噬细胞:宿主防御、炎症和组织修复中的关键角色。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1007/978-3-031-65944-7_13
Anuradha Rajamanickam, Subash Babu

Monocytes/macrophages are pivotal in host defense, inflammation, and tissue repair. They are actively engaged during helminth infections, playing critical roles in trapping pathogens, eliminating them, repairing tissue damage, and mitigating type 2 inflammation. These cells are indispensable in preserving physiological equilibrium and overseeing pathogen resistance as well as metabolic processes. Furthermore, these immune cells are influenced by cellular metabolism, which adjusts in response to host-derived factors and environmental cues. They secrete effector molecules crucial for anti-helminthic immunity and healing tissues damaged by parasites. Helminth parasites manipulate the immune regulatory capabilities of monocytes/macrophages by secreting anti-inflammatory mediators to dodge host defenses. Infections, especially with helminths, induce metabolic adaptations involving monocytes/macrophages that can lead to enhanced insulin sensitivity. This review provides a synthesis of the activation and diversity of monocytes/macrophages, their involvement in inflammation, and the latest insights into the strategies of monocyte/macrophage-mediated host defense against helminth infections. It also sheds light on recent discoveries concerning the immune regulatory interactions between monocytes/macrophages and helminth parasites.

单核细胞/巨噬细胞在宿主防御、炎症和组织修复中起着关键作用。在蠕虫感染期间,它们会积极参与,在捕捉病原体、消灭病原体、修复组织损伤和减轻 2 型炎症方面发挥关键作用。这些细胞在维持生理平衡、监督病原体抵抗力和新陈代谢过程方面不可或缺。此外,这些免疫细胞受细胞新陈代谢的影响,会根据宿主的因素和环境线索进行调整。它们分泌的效应分子对于抗蠕虫免疫和愈合被寄生虫破坏的组织至关重要。蠕虫寄生虫通过分泌抗炎介质来躲避宿主的防御,从而操纵单核细胞/巨噬细胞的免疫调节能力。感染,尤其是螺旋体感染,会诱发涉及单核细胞/巨噬细胞的代谢适应,从而导致胰岛素敏感性增强。这篇综述综述了单核细胞/巨噬细胞的活化和多样性、它们在炎症中的参与以及单核细胞/巨噬细胞介导的宿主防御蠕虫感染策略的最新见解。它还揭示了有关单核细胞/巨噬细胞与螺旋体寄生虫之间免疫调节相互作用的最新发现。
{"title":"Monocytes/Macrophages in Helminth Infections: Key Players in Host Defence, Inflammation, and Tissue Repair.","authors":"Anuradha Rajamanickam, Subash Babu","doi":"10.1007/978-3-031-65944-7_13","DOIUrl":"https://doi.org/10.1007/978-3-031-65944-7_13","url":null,"abstract":"<p><p>Monocytes/macrophages are pivotal in host defense, inflammation, and tissue repair. They are actively engaged during helminth infections, playing critical roles in trapping pathogens, eliminating them, repairing tissue damage, and mitigating type 2 inflammation. These cells are indispensable in preserving physiological equilibrium and overseeing pathogen resistance as well as metabolic processes. Furthermore, these immune cells are influenced by cellular metabolism, which adjusts in response to host-derived factors and environmental cues. They secrete effector molecules crucial for anti-helminthic immunity and healing tissues damaged by parasites. Helminth parasites manipulate the immune regulatory capabilities of monocytes/macrophages by secreting anti-inflammatory mediators to dodge host defenses. Infections, especially with helminths, induce metabolic adaptations involving monocytes/macrophages that can lead to enhanced insulin sensitivity. This review provides a synthesis of the activation and diversity of monocytes/macrophages, their involvement in inflammation, and the latest insights into the strategies of monocyte/macrophage-mediated host defense against helminth infections. It also sheds light on recent discoveries concerning the immune regulatory interactions between monocytes/macrophages and helminth parasites.</p>","PeriodicalId":39320,"journal":{"name":"Results and Problems in Cell Differentiation","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142476996","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Origin and Role of Testicular Macrophages in Testis Development, Steroidogenesis, and Spermatogenesis. 睾丸巨噬细胞在睾丸发育、类固醇生成和精子生成中的起源和作用
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1007/978-3-031-65944-7_5
Rafal P Piprek, Malgorzata Kloc, Klaudia Porebska, Paulina C Mizia, Izabela Rams-Pociecha, Jacek Z Kubiak

Testicular macrophages are the principal immune cells in the testis. In addition to their classical immune roles, they regulate male hormone synthesis by Leydig cells, regeneration of Leydig cells, spermatogonia proliferation and differentiation, maintenance of testis-specific environment for sperm formation, and testis development. The juvenile and adult testes contain two distinct macrophage populations with unique tissue localization, genetic markers, morphology, and function. The interstitial macrophages are physically and functionally connected to Leydig cells, while the peritubular macrophages localize around the seminiferous tubules and are crucial for spermatogonia differentiation. Macrophages in the fetal testes regulate testis vasculature formation and clearance of mislocated cells. The origin of testicular macrophages is unclear. Some studies suggest their origin from the yolk sac and others from the bone marrow-derived monocytes. We discuss this issue at the end of this review article.

睾丸巨噬细胞是睾丸的主要免疫细胞。除了传统的免疫作用外,它们还能调节 Leydig 细胞的雄性激素合成、Leydig 细胞的再生、精原细胞的增殖和分化、精子形成所需的睾丸特异性环境的维持以及睾丸的发育。幼年和成年睾丸含有两种不同的巨噬细胞群,它们具有独特的组织定位、遗传标记、形态和功能。间质巨噬细胞在物理和功能上与莱迪格细胞相连,而管周巨噬细胞则分布在曲细精管周围,对精原细胞的分化至关重要。胎儿睾丸中的巨噬细胞可调节睾丸血管的形成并清除错位细胞。睾丸巨噬细胞的起源尚不清楚。一些研究表明它们来源于卵黄囊,另一些则来源于骨髓单核细胞。我们将在这篇综述文章的最后讨论这个问题。
{"title":"Origin and Role of Testicular Macrophages in Testis Development, Steroidogenesis, and Spermatogenesis.","authors":"Rafal P Piprek, Malgorzata Kloc, Klaudia Porebska, Paulina C Mizia, Izabela Rams-Pociecha, Jacek Z Kubiak","doi":"10.1007/978-3-031-65944-7_5","DOIUrl":"https://doi.org/10.1007/978-3-031-65944-7_5","url":null,"abstract":"<p><p>Testicular macrophages are the principal immune cells in the testis. In addition to their classical immune roles, they regulate male hormone synthesis by Leydig cells, regeneration of Leydig cells, spermatogonia proliferation and differentiation, maintenance of testis-specific environment for sperm formation, and testis development. The juvenile and adult testes contain two distinct macrophage populations with unique tissue localization, genetic markers, morphology, and function. The interstitial macrophages are physically and functionally connected to Leydig cells, while the peritubular macrophages localize around the seminiferous tubules and are crucial for spermatogonia differentiation. Macrophages in the fetal testes regulate testis vasculature formation and clearance of mislocated cells. The origin of testicular macrophages is unclear. Some studies suggest their origin from the yolk sac and others from the bone marrow-derived monocytes. We discuss this issue at the end of this review article.</p>","PeriodicalId":39320,"journal":{"name":"Results and Problems in Cell Differentiation","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142476997","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Mechanisms of Intracellular Communication in Cancer and Pathogen Spreading. 癌症和病原体传播中的细胞内通讯机制。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1007/978-3-031-62036-2_13
Silvana Valdebenito, David Ajasin, Karl Valerdi, Yue Ran Liu, Samvrit Rao, Eliseo A Eugenin

Cell-to-cell interactions are essential for proper development, homeostasis, and complex syncytia/organ formation and function. Intercellular communication are mediated by multiple mechanisms including soluble mediators, adhesion molecules and specific mechanisms of cell to cell communication such as Gap junctions (GJ), tunneling nanotubes (TNT), and exosomes. Only recently, has been discovered that TNTs and exosomes enable the exchange of large signaling molecules, RNA, viral products, antigens, and organelles opening new avenues of research and therapeutic approaches. The focus of this review is to summarize these recent findings in physiologic and pathologic conditions.

细胞与细胞之间的相互作用对于正常发育、平衡以及复杂合胞体/器官的形成和功能至关重要。细胞间通信由多种机制介导,包括可溶性介质、粘附分子和细胞间通信的特定机制,如间隙连接(GJ)、隧道纳米管(TNT)和外泌体。直到最近,人们才发现隧道纳米管和外泌体能够交换大型信号分子、RNA、病毒产物、抗原和细胞器,为研究和治疗方法开辟了新途径。本综述的重点是总结这些在生理和病理条件下的最新发现。
{"title":"Mechanisms of Intracellular Communication in Cancer and Pathogen Spreading.","authors":"Silvana Valdebenito, David Ajasin, Karl Valerdi, Yue Ran Liu, Samvrit Rao, Eliseo A Eugenin","doi":"10.1007/978-3-031-62036-2_13","DOIUrl":"10.1007/978-3-031-62036-2_13","url":null,"abstract":"<p><p>Cell-to-cell interactions are essential for proper development, homeostasis, and complex syncytia/organ formation and function. Intercellular communication are mediated by multiple mechanisms including soluble mediators, adhesion molecules and specific mechanisms of cell to cell communication such as Gap junctions (GJ), tunneling nanotubes (TNT), and exosomes. Only recently, has been discovered that TNTs and exosomes enable the exchange of large signaling molecules, RNA, viral products, antigens, and organelles opening new avenues of research and therapeutic approaches. The focus of this review is to summarize these recent findings in physiologic and pathologic conditions.</p>","PeriodicalId":39320,"journal":{"name":"Results and Problems in Cell Differentiation","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142146509","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Microbial Extracellular Vesicles in Host-Microbiota Interactions. 宿主与微生物群互动中的微生物胞外囊泡
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1007/978-3-031-62036-2_19
Sarah Abubaker, Saba Miri, Walid Mottawea, Riadh Hammami

Extracellular vesicles have emerged as key players in cellular communication, influencing various physiological processes and pathophysiological progression, including digestion, immune response, and tissue repairs. Recently, a class of EVs derived from microbial communities has gained significant attention due to their pivotal role in intercellular communication and their potential as biomarkers and biotherapeutic agents. Microbial EVs are membrane-bound molecules encapsulating bioactive metabolites that modulate host physiological and pathological processes. This chapter discusses the evolving history of microbiota-produced EVs, including their discovery, characterization, current research status, and their diverse mechanisms of interaction with other microbes and hosts. This review also highlights the importance of EVs in health and disease and discusses recent research that shows promising results for the therapeutic potential of EVs.

细胞外囊泡已成为细胞通讯的关键角色,影响着各种生理过程和病理生理进展,包括消化、免疫反应和组织修复。最近,从微生物群落中提取的一类 EVs 引起了人们的极大关注,因为它们在细胞间通信中发挥着关键作用,并具有作为生物标记物和生物治疗剂的潜力。微生物 EVs 是膜结合分子,包裹着具有生物活性的代谢物,可调节宿主的生理和病理过程。本章讨论了微生物群产生的 EVs 的演变历史,包括它们的发现、特征描述、研究现状以及它们与其他微生物和宿主相互作用的各种机制。这篇综述还强调了 EVs 在健康和疾病中的重要性,并讨论了最近的研究,这些研究结果表明 EVs 具有治疗潜力。
{"title":"Microbial Extracellular Vesicles in Host-Microbiota Interactions.","authors":"Sarah Abubaker, Saba Miri, Walid Mottawea, Riadh Hammami","doi":"10.1007/978-3-031-62036-2_19","DOIUrl":"10.1007/978-3-031-62036-2_19","url":null,"abstract":"<p><p>Extracellular vesicles have emerged as key players in cellular communication, influencing various physiological processes and pathophysiological progression, including digestion, immune response, and tissue repairs. Recently, a class of EVs derived from microbial communities has gained significant attention due to their pivotal role in intercellular communication and their potential as biomarkers and biotherapeutic agents. Microbial EVs are membrane-bound molecules encapsulating bioactive metabolites that modulate host physiological and pathological processes. This chapter discusses the evolving history of microbiota-produced EVs, including their discovery, characterization, current research status, and their diverse mechanisms of interaction with other microbes and hosts. This review also highlights the importance of EVs in health and disease and discusses recent research that shows promising results for the therapeutic potential of EVs.</p>","PeriodicalId":39320,"journal":{"name":"Results and Problems in Cell Differentiation","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142146510","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Tunneling Nanotubes in the Brain. 大脑中的隧道纳米管
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1007/978-3-031-62036-2_10
Dimitri Budinger, Vivian Baker, Michael T Heneka

Tunneling nanotubes (TNTs) have emerged as intriguing structures facilitating intercellular communications across diverse cell types, which are integral to several biological processes, as well as participating in various disease progression. This review provides an in-depth analysis of TNTs, elucidating their structural characteristics and functional roles, with a particular focus on their significance within the brain environment and their implications in neurological and neurodegenerative disorders. We explore the interplay between TNTs and neurological diseases, offering potential mechanistic insights into disease progression, while also highlighting their potential as viable therapeutic targets. Additionally, we address the significant challenges associated with studying TNTs, from technical limitations to their investigation in complex biological systems. By addressing some of these challenges, this review aims to pave the way for further exploration into TNTs, establishing them as a central focus in advancing our understanding of neurodegenerative disorders.

隧道纳米管(TNTs)是一种有趣的结构,可促进不同类型细胞之间的细胞间通信,是多种生物过程不可或缺的组成部分,也参与了各种疾病的进展。本综述深入分析了 TNTs,阐明了它们的结构特征和功能作用,尤其关注它们在大脑环境中的重要性及其对神经和神经退行性疾病的影响。我们探讨了 TNTs 与神经系统疾病之间的相互作用,提供了有关疾病进展的潜在机理见解,同时也强调了 TNTs 作为可行治疗靶点的潜力。此外,我们还探讨了研究 TNTs 所面临的重大挑战,包括技术限制和在复杂生物系统中对其进行研究。通过探讨其中的一些挑战,本综述旨在为进一步探索 TNTs 铺平道路,将其确立为促进我们对神经退行性疾病理解的核心重点。
{"title":"Tunneling Nanotubes in the Brain.","authors":"Dimitri Budinger, Vivian Baker, Michael T Heneka","doi":"10.1007/978-3-031-62036-2_10","DOIUrl":"10.1007/978-3-031-62036-2_10","url":null,"abstract":"<p><p>Tunneling nanotubes (TNTs) have emerged as intriguing structures facilitating intercellular communications across diverse cell types, which are integral to several biological processes, as well as participating in various disease progression. This review provides an in-depth analysis of TNTs, elucidating their structural characteristics and functional roles, with a particular focus on their significance within the brain environment and their implications in neurological and neurodegenerative disorders. We explore the interplay between TNTs and neurological diseases, offering potential mechanistic insights into disease progression, while also highlighting their potential as viable therapeutic targets. Additionally, we address the significant challenges associated with studying TNTs, from technical limitations to their investigation in complex biological systems. By addressing some of these challenges, this review aims to pave the way for further exploration into TNTs, establishing them as a central focus in advancing our understanding of neurodegenerative disorders.</p>","PeriodicalId":39320,"journal":{"name":"Results and Problems in Cell Differentiation","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142146519","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Enhancer Activation by Transcription Factors and Underlying Mechanisms. 转录因子对增强子的激活作用及其内在机制
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1007/978-3-031-39027-2_10
Hisato Kondoh

Enhancers are classified into two classes based on various criteria. Class I enhancers participate primarily in finely tuned cell-specific regulation, as exemplified by the neural enhancers discussed in Chap. 9 . They are activated by simultaneous binding of transcription factors (TFs) to adjacent sites in the core sequence and are marked by moderate levels of H3K27ac modification. Class II enhancers are activated by the reiterated binding of the same TFs at multiple sites and are marked by high levels of H3K27ac modification. Class II enhancers are exemplified by enhancers in the SCR downstream of the Sox2 gene, as also discussed in Chap. 9 . Both classes of enhancers activate transcription similarly with low selectivity toward the promoters.The genomic loci broadly covered by high-level H3K27ac modification were once dubbed "Super-enhancers," implying that they are densely packed enhancers with superpowers in gene regulation. However, marking with H3K27ac modification does not predict the enhancer activity of a sequence; a "Super enhancer" region includes a few ordinary Class II enhancers. Currently, the most reliable criterion for enhancer prediction is cross-species sequence conservation.The mechanism by which transcription factors find and stay on the target enhancer site remains elusive. Results from two approaches, single-molecule live imaging and kinetic analysis using FRAP, are discussed.

增强子根据不同的标准可分为两类。第一类增强子主要参与细胞特异性调控,第 9 章讨论的神经增强子就是一个例子。它们通过转录因子(TF)与核心序列中的相邻位点同时结合而被激活,并以中等程度的 H3K27ac 修饰为标志。第二类增强子是由相同的 TFs 在多个位点上重复结合激活的,具有高水平的 H3K27ac 修饰。第二类增强子的例子是 Sox2 基因下游 SCR 中的增强子,这在第 9 章中也有讨论。这两类增强子以对启动子的低选择性激活转录。被高水平 H3K27ac 修饰广泛覆盖的基因组位点曾被称为 "超级增强子",这意味着它们是基因调控能力超强的密集增强子。然而,用 H3K27ac 修饰标记并不能预测序列的增强子活性;"超级增强子 "区域包括一些普通的二级增强子。目前,增强子预测最可靠的标准是跨物种序列保护。转录因子发现并停留在目标增强子位点的机制仍然难以捉摸。本文讨论了单分子实时成像和利用 FRAP 进行动力学分析这两种方法的结果。
{"title":"Enhancer Activation by Transcription Factors and Underlying Mechanisms.","authors":"Hisato Kondoh","doi":"10.1007/978-3-031-39027-2_10","DOIUrl":"10.1007/978-3-031-39027-2_10","url":null,"abstract":"<p><p>Enhancers are classified into two classes based on various criteria. Class I enhancers participate primarily in finely tuned cell-specific regulation, as exemplified by the neural enhancers discussed in Chap. 9 . They are activated by simultaneous binding of transcription factors (TFs) to adjacent sites in the core sequence and are marked by moderate levels of H3K27ac modification. Class II enhancers are activated by the reiterated binding of the same TFs at multiple sites and are marked by high levels of H3K27ac modification. Class II enhancers are exemplified by enhancers in the SCR downstream of the Sox2 gene, as also discussed in Chap. 9 . Both classes of enhancers activate transcription similarly with low selectivity toward the promoters.The genomic loci broadly covered by high-level H3K27ac modification were once dubbed \"Super-enhancers,\" implying that they are densely packed enhancers with superpowers in gene regulation. However, marking with H3K27ac modification does not predict the enhancer activity of a sequence; a \"Super enhancer\" region includes a few ordinary Class II enhancers. Currently, the most reliable criterion for enhancer prediction is cross-species sequence conservation.The mechanism by which transcription factors find and stay on the target enhancer site remains elusive. Results from two approaches, single-molecule live imaging and kinetic analysis using FRAP, are discussed.</p>","PeriodicalId":39320,"journal":{"name":"Results and Problems in Cell Differentiation","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140176935","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Molecular Basis of Cell Reprogramming into iPSCs with Exogenous Transcription Factors. 利用外源转录因子将细胞重编程为 iPSCs 的分子基础。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1007/978-3-031-39027-2_11
Hisato Kondoh

A striking discovery in recent decades concerning the transcription factor (TF)-dependent process was the production of induced pluripotent stem cell (iPSCs) from fibroblasts by the exogenous expression of the TF cocktail containing Oct3/4 (Pou5f1), Sox2, Klf4, and Myc, collectively called OSKM. How fibroblast cells can be remodeled into embryonic stem cell (ESC)-like iPSCs despite high epigenetic barriers has opened a new essential avenue to understanding the action of TFs in developmental regulation. Two forerunning investigations preceded the iPSC phenomenon: exogenous TF-mediated cell remodeling driven by the action of MyoD, and the "pioneer TF" action to preopen chromatin, allowing multiple TFs to access enhancer sequences. The process of remodeling somatic cells into iPSCs has been broken down into multiple subprocesses: the initial attack of OSKM on closed chromatin, sequential changes in cytosine modification, enhancer usage, and gene silencing and activation. Notably, the OSKM TFs change their genomic binding sites extensively. The analyses are still at the descriptive stage, but currently available information is discussed in this chapter.

近几十年来,关于转录因子(TF)依赖过程的一个惊人发现是,通过外源表达包含Oct3/4(Pou5f1)、Sox2、Klf4和Myc(统称OSKM)的TF鸡尾酒,从成纤维细胞中产生了诱导多能干细胞(iPSC)。成纤维细胞如何在表观遗传学障碍较高的情况下重塑为类似胚胎干细胞(ESC)的iPSC,为了解TF在发育调控中的作用开辟了一条新的重要途径。在 iPSC 现象之前有两项先驱研究:由 MyoD 作用驱动的外源 TF 介导的细胞重塑,以及预开放染色质的 "先驱 TF "作用,允许多种 TF 进入增强子序列。体细胞重塑为 iPSCs 的过程被分解为多个子过程:OSKM 对封闭染色质的初始攻击、胞嘧啶修饰的连续变化、增强子的使用以及基因沉默和激活。值得注意的是,OSKM TFs 会广泛改变其基因组结合位点。这些分析仍处于描述阶段,但本章将讨论目前可用的信息。
{"title":"Molecular Basis of Cell Reprogramming into iPSCs with Exogenous Transcription Factors.","authors":"Hisato Kondoh","doi":"10.1007/978-3-031-39027-2_11","DOIUrl":"10.1007/978-3-031-39027-2_11","url":null,"abstract":"<p><p>A striking discovery in recent decades concerning the transcription factor (TF)-dependent process was the production of induced pluripotent stem cell (iPSCs) from fibroblasts by the exogenous expression of the TF cocktail containing Oct3/4 (Pou5f1), Sox2, Klf4, and Myc, collectively called OSKM. How fibroblast cells can be remodeled into embryonic stem cell (ESC)-like iPSCs despite high epigenetic barriers has opened a new essential avenue to understanding the action of TFs in developmental regulation. Two forerunning investigations preceded the iPSC phenomenon: exogenous TF-mediated cell remodeling driven by the action of MyoD, and the \"pioneer TF\" action to preopen chromatin, allowing multiple TFs to access enhancer sequences. The process of remodeling somatic cells into iPSCs has been broken down into multiple subprocesses: the initial attack of OSKM on closed chromatin, sequential changes in cytosine modification, enhancer usage, and gene silencing and activation. Notably, the OSKM TFs change their genomic binding sites extensively. The analyses are still at the descriptive stage, but currently available information is discussed in this chapter.</p>","PeriodicalId":39320,"journal":{"name":"Results and Problems in Cell Differentiation","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140176939","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The Epiblast and Pluripotent Stem Cell Lines. 上胚层和多能干细胞系。
Q4 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-01-01 DOI: 10.1007/978-3-031-39027-2_1
Hisato Kondoh

All somatic cells develop from the epiblast, which occupies the upper layer of two-layered embryos and in most mammals is formed after the implantation stage but before gastrulation initiates. Once the epiblast is established, the epiblast cells begin to develop into various somatic cells via large-scale cell reorganization, namely, gastrulation. Different pluripotent stem cell lines representing distinct stages of embryogenesis have been established: mouse embryonic stem cells (mESCs), human embryonic stem cells (hESCs), and mouse epiblast stem cells (EpiSCs), which represent the preimplantation stage inner cell mass, an early  post-implantation stage epiblast, and a later-stage epiblast, respectively. Together, these cell lines provide excellent in vitro models of cell regulation before somatic cells develop. This chapter addresses these early developmental stages.

所有体细胞都从上胚层发育而来,上胚层位于两层胚胎的上层,在大多数哺乳动物中,上胚层形成于着床阶段之后,但在胃形成开始之前。上胚层建立后,上胚层细胞开始通过大规模细胞重组(即胃形成)发育成各种体细胞。目前已建立了代表胚胎发育不同阶段的不同多能干细胞系:小鼠胚胎干细胞(mESCs)、人类胚胎干细胞(hESCs)和小鼠上胚层干细胞(EpiSCs),它们分别代表着植入前阶段的内细胞团、植入后早期阶段的上胚层和后期阶段的上胚层。这些细胞系共同为体细胞发育前的细胞调控提供了绝佳的体外模型。本章将讨论这些早期发育阶段。
{"title":"The Epiblast and Pluripotent Stem Cell Lines.","authors":"Hisato Kondoh","doi":"10.1007/978-3-031-39027-2_1","DOIUrl":"10.1007/978-3-031-39027-2_1","url":null,"abstract":"<p><p>All somatic cells develop from the epiblast, which occupies the upper layer of two-layered embryos and in most mammals is formed after the implantation stage but before gastrulation initiates. Once the epiblast is established, the epiblast cells begin to develop into various somatic cells via large-scale cell reorganization, namely, gastrulation. Different pluripotent stem cell lines representing distinct stages of embryogenesis have been established: mouse embryonic stem cells (mESCs), human embryonic stem cells (hESCs), and mouse epiblast stem cells (EpiSCs), which represent the preimplantation stage inner cell mass, an early  post-implantation stage epiblast, and a later-stage epiblast, respectively. Together, these cell lines provide excellent in vitro models of cell regulation before somatic cells develop. This chapter addresses these early developmental stages.</p>","PeriodicalId":39320,"journal":{"name":"Results and Problems in Cell Differentiation","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140176943","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Results and Problems in Cell Differentiation
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1