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Hair microscopy: an easy adjunct to diagnosis of systemic diseases in children 毛发显微镜:诊断儿童全身性疾病的简便辅助方法
Q3 Immunology and Microbiology Pub Date : 2021-11-29 DOI: 10.1186/s42649-021-00067-6
Dharmagat Bhattarai, Aaqib Zaffar Banday, Rohit Sadanand, Kanika Arora, Gurjit Kaur, Satish Sharma, Amit Rawat

Hair, having distinct stages of growth, is a dynamic component of the integumentary system. Nonetheless, derangement in its structure and growth pattern often provides vital clues for the diagnosis of systemic diseases. Assessment of the hair structure by various microscopy techniques is, hence, a valuable tool for the diagnosis of several systemic and cutaneous disorders. Systemic illnesses like Comel-Netherton syndrome, Griscelli syndrome, Chediak Higashi syndrome, and Menkes disease display pathognomonic findings on hair microscopy which, consequently, provide crucial evidence for disease diagnosis. With minimal training, light microscopy of the hair can easily be performed even by clinicians and other health care providers which can, thus, serve as a useful tool for disease diagnosis at the patient’s bedside. This is especially true for resource-constrained settings where access and availability of advanced investigations (like molecular diagnostics) is a major constraint. Despite its immense clinical utility and non-invasive nature, hair microscopy seems to be an underutilized diagnostic modality. Lack of awareness regarding the important findings on hair microscopy may be one of the crucial reasons for its underutilization. Herein, we, therefore, present a comprehensive overview of the available methods for hair microscopy and the pertinent findings that can be observed in various diseases.

毛发具有不同的生长阶段,是人体皮肤系统的一个动态组成部分。然而,毛发结构和生长模式的异常往往能为全身性疾病的诊断提供重要线索。因此,通过各种显微镜技术评估毛发结构是诊断多种全身性疾病和皮肤疾病的重要工具。科梅尔-奈瑟顿综合征、格里斯切利综合征、切迪亚克-东综合征和门克氏症等全身性疾病在毛发显微镜下会显示出病理特征,从而为疾病诊断提供重要证据。即使是临床医生和其他医疗服务提供者,只需经过简单的培训,也可以轻松地对头发进行光学显微镜检查,因此可以作为在病人床边诊断疾病的有用工具。尤其是在资源有限的环境中,先进检查(如分子诊断)的获取和可用性是一个主要制约因素。尽管毛发显微镜具有巨大的临床实用性和非侵入性,但似乎仍是一种未得到充分利用的诊断方式。对头发显微镜检查的重要发现缺乏了解可能是导致其利用率不足的重要原因之一。因此,我们在此全面概述头发显微镜检查的可用方法以及在各种疾病中可观察到的相关发现。
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引用次数: 0
Role of Cel5H protein surface amino acids in binding with clay minerals and measurements of its forces Cel5H 蛋白质表面氨基酸在与粘土矿物结合中的作用及其作用力测量
Q3 Immunology and Microbiology Pub Date : 2021-11-11 DOI: 10.1186/s42649-021-00066-7
Renukaradhya K. Math, Nagakumar Bharatham, Palaksha K. Javaregowda, Han Dae Yun

Our previous study on the binding activity between Cel5H and clay minerals showed highest binding efficiency among other cellulase enzymes cloned. Here, based on previous studies, we hypothesized that the positive amino acids on the surface of Cel5H protein may play an important role in binding to clay surfaces. To examine this, protein sequences of Bacillus licheniformis Cel5H (BlCel5H) and Paenibacillus polymyxa Cel5A (PpCel5A) were analyzed and then selected amino acids were mutated. These mutated proteins were investigated for binding activity and force measurement via atomic force microscopy (AFM). A total of seven amino acids which are only present in BlCel5H but not in PpCel5A were selected for mutational studies and the positive residues which are present in both were omitted. Of the seven selected surface lysine residues, only three mutants K196A(M2), K54A(M3) and K157T(M4) showed 12%, 7% and 8% less clay mineral binding ability, respectively compared with wild-type. The probable reason why other mutants did not show altered binding efficiency might be due to relative location of amino acids on the protein surface. Meanwhile, measurement of adhesion forces on mica sheets showed a well-defined maximum at 69 ± 19 pN for wild-type, 58 ± 19 pN for M2, 53 ± 19 pN for M3, and 49 ± 19 pN for M4 proteins. Hence, our results demonstrated that relative location of surface amino acids of Cel5H protein especially positive charged amino acids are important in the process of clay mineral-protein binding interaction through electrostatic exchange of charges.

我们之前关于 Cel5H 与粘土矿物之间结合活性的研究表明,在克隆的其他纤维素酶中,Cel5H 的结合效率最高。在此,基于之前的研究,我们假设 Cel5H 蛋白表面的正氨基酸可能在与粘土表面的结合中发挥了重要作用。为了研究这一点,我们分析了地衣芽孢杆菌 Cel5H(BlCel5H)和多粘芽孢杆菌 Cel5A(PpCel5A)的蛋白质序列,然后对选定的氨基酸进行了突变。通过原子力显微镜(AFM)对这些突变蛋白质的结合活性和力测量进行了研究。总共选择了 7 个只存在于 BlCel5H 而不存在于 PpCel5A 的氨基酸进行突变研究,而同时存在于两者的阳性残基则被省略。在所选的七个表面赖氨酸残基中,只有 K196A(M2)、K54A(M3) 和 K157T(M4) 三个突变体与野生型相比,粘土矿物结合能力分别降低了 12%、7% 和 8%。其他突变体之所以没有表现出结合效率的改变,可能与蛋白质表面氨基酸的相对位置有关。同时,对云母片上粘附力的测量显示,野生型蛋白的最大粘附力为 69 ± 19 pN,M2 为 58 ± 19 pN,M3 为 53 ± 19 pN,M4 为 49 ± 19 pN。因此,我们的研究结果表明,Cel5H 蛋白表面氨基酸的相对位置,尤其是带正电荷的氨基酸,在粘土矿物与蛋白质通过静电电荷交换结合相互作用的过程中非常重要。
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引用次数: 0
Some living eukaryotes during and after scanning electron microscopy 扫描电子显微镜观察期间和观察之后的一些真核生物
Q3 Immunology and Microbiology Pub Date : 2021-11-04 DOI: 10.1186/s42649-021-00065-8
Ki Woo Kim

Electron microscopy (EM) is an essential imaging method in biological sciences. Since biological specimens are exposed to radiation and vacuum conditions during EM observations, they die due to chemical bond breakage and desiccation. However, some organisms belonging to the taxa of bacteria, fungi, plants, and animals (including beetles, ticks, and tardigrades) have been reported to survive hostile scanning EM (SEM) conditions since the onset of EM. The surviving organisms were observed (i) without chemical fixation, (ii) after mounting to a precooled cold stage, (iii) using cryo-SEM, or (iv) after coating with a thin polymer layer, respectively. Combined use of these techniques may provide a better condition for preservation and live imaging of multicellular organisms for a long time beyond live-cell EM.

电子显微镜(EM)是生物科学中必不可少的成像方法。由于生物标本在电子显微镜观察过程中暴露在辐射和真空条件下,会因化学键断裂和干燥而死亡。不过,据报道,自电磁学问世以来,一些属于细菌、真菌、植物和动物类群的生物(包括甲虫、蜱和沙丁鱼)在敌意扫描电磁(SEM)条件下仍能存活。这些存活的生物体分别是:(i) 未经化学固定;(ii) 安装到预冷的冷台上;(iii) 使用低温扫描电子显微镜;或 (iv) 涂上一层薄聚合物。这些技术的结合使用可为多细胞生物的长期保存和活体成像提供更好的条件,而不仅仅是活细胞电磁成像。
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引用次数: 0
Teliospore mucilage of Puccinia miscanthi revealed through the axial imaging of secondary electrons 通过二次电子轴向成像揭示丝核菌的端孢子粘液
Q3 Immunology and Microbiology Pub Date : 2021-10-22 DOI: 10.1186/s42649-021-00064-9
Ki Woo Kim

Puccinia miscanthi teliospores were observed on the leaf surface of Miscanthus sinensis using a field emission scanning electron microscope. Details of teliospore mucilage could be visualized through the axial imaging of secondary electrons for a better understanding of pathogen behavior in rust diseases.

利用场发射扫描电子显微镜观察了中华鹅掌楸叶片表面的灰霉病端孢子。通过二次电子的轴向成像,可以观察到端孢子粘液的细节,从而更好地了解锈病的病原体行为。
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引用次数: 0
Melanin-based structural coloration of birds and its biomimetic applications 基于黑色素的鸟类结构着色及其生物仿生应用。
Q3 Immunology and Microbiology Pub Date : 2021-10-11 DOI: 10.1186/s42649-021-00063-w
Deok-Jin Jeon, Suejeong Paik, Seungmuk Ji, Jong-Souk Yeo

Melanin has been a widely researched pigment by scientists for decades as it is undoubtedly the most ubiquitous and ancient pigment found in nature. Melanin plays very significant roles in structural plumage colors in birds: it has visible light-absorbing capabilities, and nanoscale structures can be formed by self-assembling melanin granules. Herein, we review recent progress on melanin-based structural coloration research. We hope that this review will provide current understanding of melanin’s structural and optical properties, natural coloration mechanisms, and biomimetic methods to implement artificial melanin-based structural colors.

几十年来,黑色素一直是科学家们广泛研究的色素,因为它无疑是自然界中最普遍、最古老的色素。黑色素在鸟类羽色结构中扮演着非常重要的角色:它具有可见光吸收能力,并且可以通过黑色素颗粒的自组装形成纳米级结构。在此,我们将回顾基于黑色素的结构着色研究的最新进展。我们希望通过这篇综述,了解黑色素的结构和光学特性、自然着色机制以及实现基于黑色素的人工结构着色的生物仿生方法。
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引用次数: 0
Cryo-EM as a powerful tool for drug discovery: recent structural based studies of SARS-CoV-2 Cryo-EM作为药物发现的有力工具:最近基于SARS-CoV-2结构的研究。
Q3 Immunology and Microbiology Pub Date : 2021-09-25 DOI: 10.1186/s42649-021-00062-x
Han-ul Kim, Hyun Suk Jung

The novel coronavirus, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has arisen as a global pandemic affecting the respiratory system showing acute respiratory distress syndrome (ARDS). However, there is no targeted therapeutic agent yet and due to the growing cases of infections and the rising death tolls, discovery of the possible drug is the need of the hour. In general, the study for discovering therapeutic agent for SARS-CoV-2 is largely focused on large-scale screening with fragment-based drug discovery (FBDD). With the recent advancement in cryo-electron microscopy (Cryo-EM), it has become one of the widely used tools in structural biology. It is effective in investigating the structure of numerous proteins in high-resolution and also had an intense influence on drug discovery, determining the binding reaction and regulation of known drugs as well as leading the design and development of new drug candidates. Here, we review the application of cryo-EM in a structure-based drug design (SBDD) and in silico screening of the recently acquired FBDD in SARS-CoV-2. Such insights will help deliver better understanding in the procurement of the effective remedial solution for this pandemic.

新型冠状病毒、严重急性呼吸综合征冠状病毒2型(SARS-CoV-2)是一种影响呼吸系统的全球大流行,表现为急性呼吸窘迫综合征(ARDS)。然而,目前还没有靶向治疗剂,由于感染病例的增加和死亡人数的上升,发现可能的药物是当务之急。一般来说,发现严重急性呼吸系统综合征冠状病毒2型治疗剂的研究主要集中在基于片段的药物发现(FBDD)的大规模筛查上。随着冷冻电子显微镜(cryo-EM)的发展,它已成为结构生物学中广泛使用的工具之一。它在高分辨率研究许多蛋白质的结构方面是有效的,也对药物发现、确定已知药物的结合反应和调节以及领导新药候选药物的设计和开发产生了重大影响。在此,我们回顾了冷冻电镜在基于结构的药物设计(SBDD)和最近获得的严重急性呼吸系统综合征冠状病毒2型FBDD的计算机筛查中的应用。这些见解将有助于在采购针对这一流行病的有效补救解决方案时提供更好的理解。
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引用次数: 0
Multispectral intravital microscopy for simultaneous bright-field and fluorescence imaging of the microvasculature 多光谱活体内显微镜用于同时对微血管进行亮场和荧光成像。
Q3 Immunology and Microbiology Pub Date : 2021-07-24 DOI: 10.1186/s42649-021-00059-6
Barry G. H. Janssen, Mohamadreza Najiminaini, Yan Min Zhang, Parsa Omidi, Jeffrey J. L. Carson

Intravital video microscopy permits the observation of microcirculatory blood flow. This often requires fluorescent probes to visualize structures and dynamic processes that cannot be observed with conventional bright-field microscopy. Conventional light microscopes do not allow for simultaneous bright-field and fluorescent imaging. Moreover, in conventional microscopes, only one type of fluorescent label can be observed. This study introduces multispectral intravital video microscopy, which combines bright-field and fluorescence microscopy in a standard light microscope. The technique enables simultaneous real-time observation of fluorescently-labeled structures in relation to their direct physical surroundings. The advancement provides context for the orientation, movement, and function of labeled structures in the microcirculation.

内视显微镜可以观察微循环血流。这通常需要荧光探针来观察传统明场显微镜无法观察到的结构和动态过程。传统的光学显微镜无法同时进行明视野和荧光成像。此外,传统显微镜只能观察一种荧光标签。本研究介绍了多光谱动态视频显微镜,它在标准光学显微镜中结合了明视野和荧光显微镜。该技术可同时实时观察荧光标记结构与其周围直接物理环境的关系。这一进展为微循环中标记结构的方向、运动和功能提供了背景信息。
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引用次数: 0
Capture silk scaffold production in the cribellar web spider 捕丝脚手架生产在网蜘蛛
Q3 Immunology and Microbiology Pub Date : 2021-07-13 DOI: 10.1186/s42649-021-00061-y
Yan Sun, Seung-Min Lee, Bon-Jin Ku, Eun-Ah Park, Myung-Jin Moon

Spider capture silk is a natural scaffolding material that outperforms most synthetic materials in terms of its combination of strength and elasticity. Among the various kinds of silk threads, cribellar thread is the most primitive prey-capturing type of spider web material. We analyzed the functional organization of the sieve-like cribellum spigots and specialized calamistral comb bristles for capture thread production by the titanoecid spider Nurscia albofasciata. The outer cribellar surface is covered with thousands of tiny spigots, and the cribellar plate produces non-sticky threads composed of thousands of fine nanofibers. N. albofasciata cribellar spigots are typically about 10?μm long, and each spigot appears as a long individual shaft with a pagoda-like tiered tip. The five distinct segments comprising each spigot is a defining characteristic of this spider. This segmented and flexible structure not only allows for spigots to bend individually and join with adjacent spigots, but it also enables spigots to draw the silk fibrils from their cribella with rows of calamistral leg bristles to form cribellar prey-capture threads.

蜘蛛捕获丝是一种天然的脚手架材料,其强度和弹性的结合优于大多数合成材料。在各种丝线中,钩线是最原始的捕获猎物类型的蜘蛛网材料。本文分析了钛蛛生产捕丝所用的筛子状卷毛龙头和专门的灾状梳毛的功能组织。外网带表面覆盖着数千个微小的龙头,网带板产生由数千个精细纳米纤维组成的不粘线。白筋膜棘球绦虫的棘突通常约为10?每个插口看起来像一个长而独立的轴,有一个宝塔状的分层尖端。组成每个龙头的五个不同的部分是这种蜘蛛的一个定义特征。这种分段和灵活的结构不仅允许插口单独弯曲并与相邻的插口连接,而且还允许插口用成排的灾难腿刚毛从其cribella中抽出丝原纤维,形成cribella捕获猎物的线。
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引用次数: 2
Sensitivity of quantitative symmetry measurement algorithms for convergent beam electron diffraction technique 会聚束电子衍射技术中定量对称测量算法的灵敏度
Q3 Immunology and Microbiology Pub Date : 2021-07-03 DOI: 10.1186/s42649-021-00060-z
Hyeongsub So, Ro Woon Lee, Sung Taek Hong, Kyou-Hyun Kim

We investigate the sensitivity of symmetry quantification algorithms based on the profile R-factor (Rp) and the normalized cross-correlation (NCC) coefficient (γ). A DM (Digital Micrograph?) script embedded in the Gatan digital microscopy software is used to develop the symmetry quantification program. Using the Bloch method, a variety of CBED patterns are simulated and used to investigate the sensitivity of symmetry quantification algorithms. The quantification results show that two symmetry quantification coefficients are significantly sensitive to structural changes even for small strain values of <?1%.

我们研究了基于轮廓r因子(Rp)和归一化互相关(NCC)系数(γ)的对称量化算法的敏感性。利用Gatan数字显微镜软件中嵌入的DM (Digital Micrograph?)脚本编写对称量化程序。利用布洛赫方法,模拟了多种CBED模式,并用于研究对称量化算法的灵敏度。量化结果表明,即使应变值很小(<?1%),两个对称量化系数对结构变化也非常敏感。
{"title":"Sensitivity of quantitative symmetry measurement algorithms for convergent beam electron diffraction technique","authors":"Hyeongsub So,&nbsp;Ro Woon Lee,&nbsp;Sung Taek Hong,&nbsp;Kyou-Hyun Kim","doi":"10.1186/s42649-021-00060-z","DOIUrl":"https://doi.org/10.1186/s42649-021-00060-z","url":null,"abstract":"<p>We investigate the sensitivity of symmetry quantification algorithms based on the profile R-factor (<i>R</i><sub><i>p</i></sub>) and the normalized cross-correlation (NCC) coefficient (<i>γ</i>). A DM (Digital Micrograph<sup>?</sup>) script embedded in the Gatan digital microscopy software is used to develop the symmetry quantification program. Using the Bloch method, a variety of CBED patterns are simulated and used to investigate the sensitivity of symmetry quantification algorithms. The quantification results show that two symmetry quantification coefficients are significantly sensitive to structural changes even for small strain values of &lt;?1%.</p>","PeriodicalId":470,"journal":{"name":"Applied Microscopy","volume":"51 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2021-07-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1186/s42649-021-00060-z","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"4126201","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 2
A brief review of non-invasive brain imaging technologies and the near-infrared optical bioimaging 无创脑成像技术与近红外光学生物成像技术综述
Q3 Immunology and Microbiology Pub Date : 2021-06-25 DOI: 10.1186/s42649-021-00058-7
Beomsue Kim, Hongmin Kim, Songhui Kim, Young-ran Hwang

Brain disorders seriously affect life quality. Therefore, non-invasive neuroimaging has received attention to monitoring and early diagnosing neural disorders to prevent their progress to a severe level. This short review briefly describes the current MRI and PET/CT techniques developed for non-invasive neuroimaging and the future direction of optical imaging techniques to achieve higher resolution and specificity using the second near-infrared (NIR-II) region of wavelength with organic molecules.

脑部疾病严重影响生活质量。因此,无创神经影像学监测和早期诊断神经系统疾病以防止其发展到严重程度已受到重视。本文简要介绍了目前用于非侵入性神经成像的MRI和PET/CT技术,以及光学成像技术的未来发展方向,即利用第二近红外(NIR-II)波长区域与有机分子实现更高的分辨率和特异性。
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引用次数: 15
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Applied Microscopy
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