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Protective effects of Erythronium japonicum and Corylopsis coreana Uyeki extracts against 1,3-dichloro-2-propanol-induced hepatotoxicity in rats 丹参和山茱萸提取物对1,3-二氯-2-丙醇所致大鼠肝毒性的保护作用
Q3 Immunology and Microbiology Pub Date : 2020-12-02 DOI: 10.1186/s42649-020-00049-0
Seunghyun Kim, Hee-Ock Boo, Taeho Ahn, Chun-Sik Bae

Erythronium japonicum (E. japonicum) and Corylopsis coreana Uyeki (C. coreana Uyeki, Korean winter hazel) have been shown to significantly decrease 1,3-dichloro-2-propanol (1,3-DCP)-induced generation of reactive oxygen species and CYP2E1 activity in HuH7, human hepatocytes. In this study, we expanded upon the previous study and investigated the effects of E. japonicum and C. coreana Uyeki extracts on 1,3-DCP-induced liver damage in rats. The pre-treatment of rats with these extracts alleviated a decrease in body weight and reduced 1,3-DCP-induced increase in catalytic activities of hepatic enzymes, such as aspartate aminotransferase and alanine aminotransferase, in the serum. Moreover, treatment with the extracts restored the 1,3-DCP-induced decreases in anti-oxidant enzyme activities, such as the activities of superoxide dismutase and catalase, in the rat liver. Histopathological studies also strongly supported the results of enzyme activities. These results suggest a possibility that the extracts of E. japonicum and C. coreana Uyeki can be a remedy for alleviating 1,3-DCP-induced liver damage in animals.

日本赤藓(Erythronium japonicum)和韩国冬梅(Corylopsis coreana Uyeki, Korean winter hazel)已被证明能显著降低1,3-二氯-2-丙醇(1,3- dcp)诱导的HuH7人肝细胞中活性氧的产生和CYP2E1的活性。本研究在前人研究的基础上,进一步探讨了日本藤和山茱萸提取物对1,3- dcp致大鼠肝损伤的保护作用。用这些提取物预处理大鼠,减轻了体重的下降,降低了1,3- dcp引起的血清中天冬氨酸转氨酶和丙氨酸转氨酶等肝脏酶的催化活性升高。此外,用提取物处理可以恢复1,3- dcp诱导的大鼠肝脏中抗氧化酶活性的下降,如超氧化物歧化酶和过氧化氢酶的活性。组织病理学研究也强烈支持酶活性的结果。这些结果提示,日本藤和山茱萸提取物可能是一种减轻1,3- dcp引起的动物肝损伤的药物。
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引用次数: 2
Mechanical removal of surface residues on graphene for TEM characterizations 机械去除石墨烯表面残留物的TEM表征
Q3 Immunology and Microbiology Pub Date : 2020-11-30 DOI: 10.1186/s42649-020-00048-1
Dong-Gyu Kim, Sol Lee, Kwanpyo Kim

Contamination on two-dimensional (2D) crystal surfaces poses serious limitations on fundamental studies and applications of 2D crystals. Surface residues induce uncontrolled doping and charge carrier scattering in 2D crystals, and trapped residues in mechanically assembled 2D vertical heterostructures often hinder coupling between stacked layers. Developing a process that can reduce the surface residues on 2D crystals is important. In this study, we explored the use of atomic force microscopy (AFM) to remove surface residues from 2D crystals. Using various transmission electron microscopy (TEM) investigations, we confirmed that surface residues on graphene samples can be effectively removed via contact-mode AFM scanning. The mechanical cleaning process dramatically increases the residue-free areas, where high-resolution imaging of graphene layers can be obtained. We believe that our mechanical cleaning process can be utilized to prepare high-quality 2D crystal samples with minimum surface residues.

二维晶体表面的污染严重限制了二维晶体的基础研究和应用。在二维晶体中,表面残馀会引起不受控制的掺杂和载流子散射,而在机械组装的二维垂直异质结构中被捕获的残馀往往会阻碍堆叠层之间的耦合。开发一种可以减少二维晶体表面残留的工艺是很重要的。在这项研究中,我们探索了使用原子力显微镜(AFM)去除二维晶体表面残留物的方法。通过各种透射电子显微镜(TEM)研究,我们证实石墨烯样品的表面残留物可以通过接触模式AFM扫描有效去除。机械清洗过程大大增加了无残留物区域,从而可以获得石墨烯层的高分辨率成像。我们相信,我们的机械清洗工艺可以用来制备高质量的二维晶体样品,表面残留物最少。
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引用次数: 5
Sequential conversion from line defects to atomic clusters in monolayer WS2 单层WS2中从线缺陷到原子簇的顺序转换
Q3 Immunology and Microbiology Pub Date : 2020-11-30 DOI: 10.1186/s42649-020-00047-2
Gyeong Hee Ryu, Ren-Jie Chan

Transition metal dichalcogenides (TMD), which is composed of a transition metal atom and chalcogen ion atoms, usually form vacancies based on the knock-on threshold of each atom. In particular, when electron beam is irradiated on a monolayer TMD such as MoS2 and WS2, S vacancies are formed preferentially, and they are aligned linearly to constitute line defects. And then, a hole is formed at the point where the successively formed line defects collide, and metal clusters are also formed at the edge of the hole. This study reports a process in which the line defects formed in a monolayer WS2 sheet expends into holes. Here, the process in which the W cluster, which always occurs at the edge of the formed hole, goes through a uniform intermediate phase is explained based on the line defects and the formation behavior of the hole. Further investigation confirms the atomic structure of the intermediate phase using annular dark field scanning transition electron microscopy (ADF-STEM) and image simulation.

过渡金属二硫族化合物(TMD)由过渡金属原子和硫离子原子组成,通常根据每个原子的撞击阈值形成空位。特别是当电子束照射在MoS2和WS2等单层TMD上时,优先形成S空位,并呈线性排列构成线缺陷。然后,在相继形成的线缺陷碰撞处形成一个孔,并且在孔的边缘也形成金属团簇。本研究报告了在单层WS2薄片中形成的线缺陷扩展成孔的过程。本文从线缺陷和孔的形成行为出发,解释了W团簇在形成孔边缘经过均匀中间相的过程。利用环形暗场扫描跃迁电子显微镜(ADF-STEM)和图像模拟进一步证实了中间相的原子结构。
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引用次数: 1
Stem cell behaviors on periodic arrays of nanopillars analyzed by high-resolution scanning electron microscope images 利用高分辨率扫描电镜图像分析了干细胞在纳米柱周期性阵列上的行为
Q3 Immunology and Microbiology Pub Date : 2020-11-17 DOI: 10.1186/s42649-020-00046-3
Jihun Kang, Eun-Hye Kang, Young-Shik Yun, Seungmuk Ji, In-Sik Yun, Jong-Souk Yeo

The biocompatible polyurethane acrylate (PUA) nanopillars were fabricated by soft lithography using three different sizes of nanobeads (350, 500, and 1000?nm), and the human adipose-derived stem cells (hASCs) were cultured on the nanopillars. The hASCs and their various behaviors, such as cytoplasmic projections, migration, and morphology, were observed by high resolution images using a scanning electron microscope (SEM). With the accurate analysis by SEM for the controlled sizes of nanopillars, the deflections are observed at pillars fabricated with 350- and 500-nm nanobeads. These high-resolution images could offer crucial information to elucidate the complicated correlations between nanopillars and the cells, such as morphology and cytoplasmic projections.

采用软光刻技术制备了具有生物相容性的聚氨酯丙烯酸酯(PUA)纳米柱,并在其上培养了人脂肪源性干细胞(hASCs)。利用高分辨率扫描电镜(SEM)观察了hASCs及其各种行为,如细胞质投射、迁移和形态。通过扫描电镜对控制尺寸的纳米柱进行精确分析,观察了350 nm和500 nm纳米球制备的纳米柱的挠度。这些高分辨率图像可以为阐明纳米柱与细胞之间的复杂关系提供关键信息,例如形态和细胞质投影。
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引用次数: 0
Scanning acoustic microscopy for material evaluation 用于材料评价的扫描声学显微镜
Q3 Immunology and Microbiology Pub Date : 2020-11-05 DOI: 10.1186/s42649-020-00045-4
Hyunung Yu

Scanning acoustic microscopy (SAM) or Acoustic Micro Imaging (AMI) is a powerful, non-destructive technique that can detect hidden defects in elastic and biological samples as well as non-transparent hard materials. By monitoring the internal features of a sample in three-dimensional integration, this technique can efficiently find physical defects such as cracks, voids, and delamination with high sensitivity. In recent years, advanced techniques such as ultrasound impedance microscopy, ultrasound speed microscopy, and scanning acoustic gigahertz microscopy have been developed for applications in industries and in the medical field to provide additional information on the internal stress, viscoelastic, and anisotropic, or nonlinear properties. X-ray, magnetic resonance, and infrared techniques are the other competitive and widely used methods. However, they have their own advantages and limitations owing to their inherent properties such as different light sources and sensors.

This paper provides an overview of the principle of SAM and presents a few results to demonstrate the applications of modern acoustic imaging technology. A variety of inspection modes, such as vertical, horizontal, and diagonal cross-sections have been presented by employing the focus pathway and image reconstruction algorithm. Images have been reconstructed from the reflected echoes resulting from the change in the acoustic impedance at the interface of the material layers or defects. The results described in this paper indicate that the novel acoustic technology can expand the scope of SAM as a versatile diagnostic tool requiring less time and having a high efficiency.

扫描声学显微镜(SAM)或声学微成像(AMI)是一种强大的非破坏性技术,可以检测弹性和生物样品以及非透明硬材料中的隐藏缺陷。该技术通过在三维积分中监测样品的内部特征,可以高效地发现裂纹、空隙、分层等物理缺陷,灵敏度高。近年来,超声阻抗显微镜、超声速度显微镜和扫描声千兆赫显微镜等先进技术已被开发用于工业和医学领域,以提供有关内应力、粘弹性、各向异性或非线性特性的额外信息。x射线、磁共振和红外技术是其他具有竞争力和广泛使用的方法。然而,由于其固有的特性,如不同的光源和传感器,它们有自己的优势和局限性。本文概述了声成像技术的基本原理,并介绍了现代声成像技术的一些应用成果。利用聚焦路径和图像重建算法,提出了垂直、水平和对角截面等多种检测模式。利用材料层界面或缺陷处声阻抗变化引起的反射回波重构图像。研究结果表明,这种新型声学技术可以扩展SAM作为一种多功能诊断工具的范围,所需时间短,效率高。
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引用次数: 12
The LaserFIB: new application opportunities combining a high-performance FIB-SEM with femtosecond laser processing in an integrated second chamber LaserFIB:在集成的第二腔室中,将高性能FIB-SEM与飞秒激光处理相结合,提供了新的应用机会
Q3 Immunology and Microbiology Pub Date : 2020-10-26 DOI: 10.1186/s42649-020-00044-5
Ben Tordoff, Cheryl Hartfield, Andrew J. Holwell, Stephan Hiller, Marcus Kaestner, Stephen Kelly, Jaehan Lee, Sascha Müller, Fabian Perez-Willard, Tobias Volkenandt, Robin White, Thomas Rodgers

The development of the femtosecond laser (fs laser) with its ability to provide extremely rapid athermal ablation of materials has initiated a renaissance in materials science. Sample milling rates for the fs laser are orders of magnitude greater than that of traditional focused ion beam (FIB) sources currently used. In combination with minimal surface post-processing requirements, this technology is proving to be a game changer for materials research. The development of a femtosecond laser attached to a focused ion beam scanning electron microscope (LaserFIB) enables numerous new capabilities, including access to deeply buried structures as well as the production of extremely large trenches, cross sections, pillars and TEM H-bars, all while preserving microstructure and avoiding or reducing FIB polishing. Several high impact applications are now possible due to this technology in the fields of crystallography, electronics, mechanical engineering, battery research and materials sample preparation. This review article summarizes the current opportunities for this new technology focusing on the materials science megatrends of engineering materials, energy materials and electronics.

飞秒激光器(fs激光器)的发展及其提供极快的材料非热烧蚀的能力已经开始了材料科学的复兴。光纤激光器的样品铣削速率比目前使用的传统聚焦离子束(FIB)源的铣削速率大几个数量级。结合最小的表面后处理要求,这项技术被证明是材料研究的游戏规则改变者。将飞秒激光器连接到聚焦离子束扫描电子显微镜(LaserFIB)上,实现了许多新功能,包括进入深埋结构,以及生产极大的沟槽、横截面、柱和TEM h棒,同时保持微观结构,避免或减少FIB抛光。由于该技术在晶体学,电子学,机械工程,电池研究和材料样品制备领域的一些高影响应用现在成为可能。本文从工程材料、能源材料和电子材料的材料科学大趋势等方面综述了该新技术的发展前景。
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引用次数: 19
Noise2Atom: unsupervised denoising for scanning transmission electron microscopy images Noise2Atom:扫描透射电子显微镜图像的无监督去噪
Q3 Immunology and Microbiology Pub Date : 2020-10-20 DOI: 10.1186/s42649-020-00041-8
Feng Wang, Trond R. Henninen, Debora Keller, Rolf Erni

We propose an effective deep learning model to denoise scanning transmission electron microscopy (STEM) image series, named Noise2Atom, to map images from a source domain (mathcal {S}) to a target domain (mathcal {C}), where (mathcal {S}) is for our noisy experimental dataset, and (mathcal {C}) is for the desired clear atomic images. Noise2Atom uses two external networks to apply additional constraints from the domain knowledge. This model requires no signal prior, no noise model estimation, and no paired training images. The only assumption is that the inputs are acquired with identical experimental configurations. To evaluate the restoration performance of our model, as it is impossible to obtain ground truth for our experimental dataset, we propose consecutive structural similarity (CSS) for image quality assessment, based on the fact that the structures remain much the same as the previous frame(s) within small scan intervals. We demonstrate the superiority of our model by providing evaluation in terms of CSS and visual quality on different experimental datasets.

我们提出了一个有效的深度学习模型来对扫描透射电子显微镜(STEM)图像序列进行降噪,名为Noise2Atom,将图像从源域(mathcal {S})映射到目标域(mathcal {C}),其中(mathcal {S})用于我们的噪声实验数据集,(mathcal {C})用于所需的清晰原子图像。Noise2Atom使用两个外部网络来应用来自领域知识的附加约束。该模型不需要信号先验,不需要噪声模型估计,不需要成对训练图像。唯一的假设是输入是用相同的实验配置获得的。为了评估我们的模型的恢复性能,因为我们的实验数据集不可能获得地面真实值,我们提出了连续结构相似性(CSS)用于图像质量评估,基于这样一个事实,即结构在很小的扫描间隔内与前一帧保持大致相同。我们通过在不同的实验数据集上提供CSS和视觉质量方面的评估来证明我们模型的优越性。
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引用次数: 28
Method of Ga removal from a specimen on a microelectromechanical system-based chip for in-situ transmission electron microscopy 用于原位透射电子显微镜的基于微机电系统芯片的样品Ga去除方法
Q3 Immunology and Microbiology Pub Date : 2020-10-14 DOI: 10.1186/s42649-020-00043-6
Yena Kwon, Byeong-Seon An, Yeon-Ju Shin, Cheol-Woong Yang

In-situ transmission electron microscopy (TEM) holders that employ a chip-type specimen stage have been widely utilized in recent years. The specimen on the microelectromechanical system (MEMS)-based chip is commonly prepared by focused ion beam (FIB) milling and ex-situ lift-out (EXLO). However, the FIB-milled thin-foil specimens are inevitably contaminated with Ga+ ions. When these specimens are heated for real time observation, the Ga+ ions influence the reaction or aggregate in the protection layer. An effective method of removing the Ga residue by Ar+ ion milling within FIB system was explored in this study. However, the Ga residue remained in the thin-foil specimen that was extracted by EXLO from the trench after the conduct of Ar+ ion milling. To address this drawback, the thin-foil specimen was attached to an FIB lift-out grid, subjected to Ar+ ion milling, and subsequently transferred to an MEMS-based chip by EXLO. The removal of the Ga residue was confirmed by energy dispersive spectroscopy.

采用芯片式试样台的原位透射电子显微镜(TEM)支架近年来得到了广泛应用。基于微机电系统(MEMS)的芯片上的试样通常采用聚焦离子束(FIB)铣削和非原位提升(EXLO)法制备。然而,fib铣削薄片试样不可避免地受到Ga+离子的污染。当这些试样被加热进行实时观察时,Ga+离子会影响反应或聚集在保护层中。本研究探索了在FIB系统中利用Ar+离子铣削去除Ga残渣的有效方法。而氩离子铣削后用EXLO提取的薄片样品中仍有Ga残留。为了解决这一缺陷,薄片试样被附着在FIB吊出网格上,进行Ar+离子铣削,随后通过EXLO转移到基于mems的芯片上。通过能量色散谱分析证实了Ga残留的去除。
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引用次数: 1
Sublimable materials facilitate the TEM sample preparation of oil-soluble nanomaterials 可升华材料有利于油溶性纳米材料的TEM样品制备
Q3 Immunology and Microbiology Pub Date : 2020-09-29 DOI: 10.1186/s42649-020-00042-7
Yu-Hao Deng

Sample preparation is significantly important to the high-resolution transmission electron microscopy (HRTEM) characterization of nanomaterials. However, many general organic solvents can dissolve the necessary organic polymer support layer in TEM grid, which causes it difficult to obtain high-quality samples of oil-soluble nanomaterials. In this study, a new sample preparation method for oil-soluble nanomaterials has been developed by using the sublimable material as a transition layer. Experiments also show that there is no damage to TEM grids and high-quality HRTEM images can be obtained via this method. This approach paves the way to applicable HRTEM sample preparation of oil-soluble nanomaterials.

样品制备对纳米材料的高分辨率透射电镜(HRTEM)表征具有重要意义。然而,许多普通的有机溶剂可以溶解TEM网格中必要的有机聚合物支撑层,导致难以获得高质量的油溶性纳米材料样品。本研究开发了一种以可升华材料为过渡层制备油溶性纳米材料样品的新方法。实验结果表明,该方法对TEM网格无损伤,可获得高质量的HRTEM图像。该方法为应用HRTEM制备油溶性纳米材料的样品铺平了道路。
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引用次数: 1
Fine structure of the intercalated disc and cardiac junctions in the black widow spider Latrodectus mactans 黑寡妇蜘蛛间插盘和心脏连接处的精细结构
Q3 Immunology and Microbiology Pub Date : 2020-09-25 DOI: 10.1186/s42649-020-00040-9
Yan Sun, Seung-Min Lee, Bon-Jin Ku, Myung-Jin Moon

Arthropods have an open circulatory system with a simple tubular heart, so it has been estimated that the contractile pumping structure of the cardiac muscle will be less efficient than that of vertebrates. Nevertheless, certain arthropods are known to have far superior properties and characteristics than vertebrates, so we investigated the fine structural features of intercalated discs and cardiac junctions of cardiac muscle cells in the black widow spider Latrodectus mactans. Characteristically, the spider cardiac muscle has typical striated features and represents a functional syncytium that supports multiple connections to adjacent cells by intercalated discs. Histologically, the boundary lamina of each sarcolemma connects to the basement membrane to form an elastic sheath, and the extracellular matrix allows the cells to be anchored to other tissues. Since the intercalated disc is also part of sarcolemma, it contains gap junctions for depolarization and desmosomes that keep the fibers together during cardiac muscle contraction. Furthermore, fascia adherens and macula adherens (desmosomes) were also identified as cell junctions in both sarcolemma and intercalated discs. To enable the coordinated heartbeat of the cardiac muscle, the muscle fibers have neuronal innervations by multiple axons from the motor ganglion.

节肢动物有一个开放的循环系统和一个简单的管状心脏,因此据估计,心肌的收缩泵结构将比脊椎动物的效率低。然而,已知某些节肢动物具有比脊椎动物优越得多的特性和特征,因此我们研究了黑寡妇蜘蛛(Latrodectus mactans)心肌细胞间插盘和心脏连接处的精细结构特征。蜘蛛心肌具有典型的条纹特征,是一种功能性合胞体,通过插片支持与相邻细胞的多重连接。组织学上,每个肌膜的边界层与基底膜连接形成弹性鞘,细胞外基质允许细胞锚定在其他组织上。由于间插椎间盘也是肌膜的一部分,它包含用于去极化的间隙连接和在心肌收缩时使纤维保持在一起的桥粒。此外,筋膜粘附体和黄斑粘附体(桥粒)也被鉴定为肌膜和间插椎间盘的细胞连接。为了使心肌的协调心跳,肌肉纤维受到来自运动神经节的多个轴突的神经支配。
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引用次数: 2
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Applied Microscopy
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