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Poxvirus under the eyes of electron microscope 电镜下痘病毒
Q3 Immunology and Microbiology Pub Date : 2022-11-14 DOI: 10.1186/s42649-022-00080-3
Jaekyung Hyun

Zoonotic poxvirus infections pose significant threat to human health as we have witnessed recent spread of monkeypox. Therefore, insights into molecular mechanism behind poxvirus replication cycle are needed for the development of efficient antiviral strategies. Virion assembly is one of the key steps that determine the fate of replicating poxviruses. However, in-depth understanding of poxvirus assembly is challenging due to the complex nature of multi-step morphogenesis and heterogeneous virion structures. Despite these challenges, decades of research have revealed virion morphologies at various maturation stages, critical protein components and interactions with host cell compartments. Transmission electron microscopy has been employed as an indispensable tool for the examination of virion morphology, and more recently for the structure determination of protein complexes. In this review, we describe some of the major findings in poxvirus morphogenesis and the contributions of continuously advancing electron microscopy techniques.

人畜共患痘病毒感染对人类健康构成重大威胁,因为我们最近目睹了猴痘的传播。因此,需要深入了解痘病毒复制周期背后的分子机制,以开发有效的抗病毒策略。病毒粒子组装是决定痘病毒复制命运的关键步骤之一。然而,由于多步骤形态发生的复杂性和病毒粒子结构的异质性,对痘病毒组装的深入理解是具有挑战性的。尽管存在这些挑战,数十年的研究已经揭示了病毒粒子在不同成熟阶段的形态、关键的蛋白质成分以及与宿主细胞隔室的相互作用。透射电子显微镜已被用作检查病毒粒子形态的不可或缺的工具,最近用于蛋白质复合物的结构测定。在这篇综述中,我们描述了痘病毒形态发生的一些主要发现以及不断发展的电子显微镜技术的贡献。
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引用次数: 3
Microstructural, mechanical, and electrochemical analysis of carbon doped AISI carbon steels 碳掺杂AISI碳钢的显微结构、力学和电化学分析
Q3 Immunology and Microbiology Pub Date : 2022-10-20 DOI: 10.1186/s42649-022-00079-w
Muhammad Ishtiaq, Aqil Inam, Saurabh Tiwari, Jae Bok Seol

The effect of carbon doping contents on the microstructure, hardness, and corrosion properties of heat-treated AISI steel grades of plain carbon steel was investigated in this study. Various microstructures including coarse ferrite-pearlite, fine ferrite-pearlite, martensite, and bainite were developed by different heat treatments i.e. annealing, normalizing, quenching, and austempering, respectively. The developed microstructures, micro-hardness, and corrosion properties were investigated by a light optical microscope, scanning electron microscope, electromechanical (Vickers Hardness tester), and electrochemical (Gamry Potentiostat) equipment, respectively. The highest corrosion rates were observed in bainitic microstructures (2.68–12.12 mpy), whereas the lowest were found in the fine ferritic-pearlitic microstructures (1.57–6.36 mpy). A direct correlation has been observed between carbon concentration and corrosion rate, i.e. carbon content resulted in an increase in corrosion rate (2.37 mpy for AISI 1020 to 9.67 mpy for AISI 1050 in annealed condition).

研究了碳掺杂含量对经热处理的普通碳钢AISI钢的显微组织、硬度和腐蚀性能的影响。通过退火、正火、淬火和等温回火处理,形成了粗铁素体-珠光体、细铁素体-珠光体、马氏体和贝氏体等多种显微组织。分别用光学显微镜、扫描电镜、机电(维氏硬度计)和电化学(Gamry恒电位器)对制备的材料的显微组织、显微硬度和腐蚀性能进行了研究。贝氏体组织的腐蚀速率最高(2.68 ~ 12.12 mpy),细铁素体-珠光体组织的腐蚀速率最低(1.57 ~ 6.36 mpy)。碳浓度与腐蚀速率直接相关,即碳含量导致腐蚀速率增加(在退火条件下,AISI 1020为2.37 mpy, AISI 1050为9.67 mpy)。
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引用次数: 0
Review on the structural understanding of the 10S myosin II in the era of Cryo-electron microscopy 低温电镜时代对10S肌球蛋白II的结构认识综述
Q3 Immunology and Microbiology Pub Date : 2022-10-11 DOI: 10.1186/s42649-022-00078-x
Anahita Vispi Bharda, Hyun Suk Jung

The compact smooth muscle 10S myosin II is a type of a monomer with folded tail and the heads bending back to interact with each other. This inactivated form is associated with regulatory and enzymatic activities affecting myosin processivity with actin filaments as well as ATPase activity. Phosphorylation by RLC can however, shuttle myosin from the inhibited 10S state to an activated 6S state, dictating the equilibrium. Multiple studies contributed by TEM have provided insights in the structural understanding of the 10S form. However, it is only recently that the true potential of Cryo-EM in deciphering the intramolecular interactions of 10S myosin state has been realized. This has led to an influx of new revelations on the 10S inactivation, unfolding mechanism and association in various diseases. This study reviews the gradual development in the structural interpretation of 10S species from TEM to Cryo-EM era. Furthermore, we discuss the utility of Cryo-EM in future myosin 10S studies and its contribution to human health.

紧凑型平滑肌10S肌球蛋白II是一种尾部折叠、头部向后弯曲以相互作用的单体。这种失活形式与影响肌动蛋白丝和atp酶活性的肌球蛋白加工的调节和酶活性有关。然而,RLC的磷酸化可以将肌凝蛋白从抑制的10S状态转移到激活的6S状态,从而决定平衡。TEM的多项研究提供了对10S结构理解的见解。然而,直到最近,Cryo-EM在破译10S肌球蛋白状态的分子内相互作用方面的真正潜力才被实现。这导致了关于10S失活、展开机制及其在各种疾病中的关联的大量新发现。本研究回顾了10S物种从TEM到Cryo-EM时代的结构解释的逐渐发展。此外,我们还讨论了冷冻电镜在未来肌球蛋白10S研究中的应用及其对人类健康的贡献。
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引用次数: 0
Histology and morphometry of the skin of the trident goby Tridentiger brevispinis (Perciformes, Gobiidae) 三叉戟虾虎鱼(虾虎鱼科,虾虎鱼目)皮肤的组织学和形态学研究
Q3 Immunology and Microbiology Pub Date : 2022-08-09 DOI: 10.1186/s42649-022-00077-y
Hyun-Tae Kim

The Korean trident goby, Tridentiger brevispinis, lives in adverse habitats that can easily become hypoxic due to low precipitation, regional dry periods, and high amounts of solar radiation. Histological and morphometric studies revealed the goby’s specialized skin (35.4–150.0 μm in thickness), consisting of an epidermis and dermis. The thicker epidermis comprises an outermost surface layer (having taste buds, stratified flattened cells, mucous cells, pigment cells, and stratified polygonal cells), middle layer (having stratified polygonal cells), and stratum germinativum (stratified columnar cells). In particular, the dermis has scales, well-developed vascularization, and a few blood capillaries just above the basement membrane, and a reduced diffusion distance was present in the lateral body. Consequently, adaptations such as thicker epidermis, well-developed vascularization, few blood capillaries, and a reduced diffusion distance may provide cutaneous respiration for survival in poorly oxygenated water during the periodic dry season.

韩国三叉戟虾虎鱼(Tridentiger brevispinis)生活在不利的栖息地,由于降水少、地区干旱期和大量的太阳辐射,这些栖息地很容易缺氧。组织学和形态学研究显示虾虎鱼的特殊皮肤(厚度为35.4-150.0 μm),由表皮和真皮层组成。较厚的表皮包括最外层(具有味蕾、分层扁平细胞、粘液细胞、色素细胞和分层多边形细胞)、中间层(具有分层多边形细胞)和生发层(分层柱状细胞)。特别是真皮有鳞片,血管发达,基膜上方有少量毛细血管,外侧体扩散距离缩短。因此,诸如较厚的表皮、发达的血管、较少的毛细血管和较短的扩散距离等适应可能为周期性干旱季节在缺氧水中的生存提供皮肤呼吸。
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引用次数: 2
In-situ formation of co particles encapsulated by graphene layers 由石墨烯层封装的co颗粒的原位形成
Q3 Immunology and Microbiology Pub Date : 2022-07-14 DOI: 10.1186/s42649-022-00076-z
Minjeong Lee, Gyutae Kim, Gyu Hyun Jeong, Aram Yoon, Zonghoon Lee, Gyeong Hee Ryu

The process of encapsulating cobalt nanoparticles using a graphene layer is mainly direct pyrolysis. The encapsulation structure of hybrids prepared in this way improves the catalyst stability, which greatly reduces the leaching of non-metals and prevents metal nanoparticles from growing beyond a certain size. In this study, cobalt particles surrounded by graphene layers were formed by increasing the temperature in a transmission electron microscope, and they were analyzed using scanning transmission electron microscopy (STEM). Synthesized cobalt hydroxide nanosheets were used to obtain cobalt particles using an in-situ heating holder inside a TEM column. The cobalt nanoparticles are surrounded by layers of graphene, and the number of layers increases as the temperature increases. The interlayer spacing of the graphene layers was also investigated using atomic imaging. The success achieved in the encapsulation of metallic nanoparticles in graphene layers paves the way for the design of highly active and reusable heterogeneous catalysts for more challenging molecules.

用石墨烯层封装钴纳米颗粒的工艺主要是直接热解。通过这种方法制备的杂化物的包封结构提高了催化剂的稳定性,大大减少了非金属的浸出,防止了金属纳米颗粒的生长超过一定的尺寸。在本研究中,在透射电子显微镜下通过提高温度形成被石墨烯层包围的钴颗粒,并使用扫描透射电子显微镜(STEM)对其进行分析。合成的氢氧化钴纳米片在TEM柱内使用原位加热支架获得钴颗粒。钴纳米颗粒被石墨烯层包围,层数随着温度的升高而增加。利用原子成像技术研究了石墨烯层间的间距。在石墨烯层中封装金属纳米颗粒的成功为设计高活性和可重复使用的多相催化剂铺平了道路。
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引用次数: 1
Light and electron microscopic morphology of the fertilized egg and fertilized egg envelope of Poropanchax normani, Poeciliidae, Teleostei 鲈科normanchax Poropanchax, Poeciliidae, Teleostei受精卵和受精卵包膜的光镜和电镜形态
Q3 Immunology and Microbiology Pub Date : 2022-07-13 DOI: 10.1186/s42649-022-00075-0
Dong Heui Kim

We examined the morphology of the fertilized egg and the fine structure of fertilized egg envelopes of Poropanchax normani belonging to the family Poeciliidae, also known as Norman’s lampeye using light and electron microscopes. The fertilized eggs with narrow perivitelline space were found to be spherical and demersal, additionally containing small oil droplets in the vitelline membrane. Further, a bundle of adhesive filaments was observed to be present on one side of the fertilized egg. These filaments possessed remarkably high elasticity and were approximately 1-3 mm in length. The size of the fertilized egg was determined to be about 1.49 ± 0.07 mm (n = 30). The outer surface appeared smooth, and adhesive filaments originating at different location of the surface of the envelope were found to be distributed around the egg envelope and were joined together to form a single long bundle in scanning electron microscopic observation. A peak-like structure formed of several straight wrinkles was observed around the micropyle. However, the complete structure of the micropyle could not be studied due to the depth at which it was located. Additionally, the total thickness of the egg envelope was ascertained to be approximately12.5–14.5 μm. The egg envelope consisted of two distinct layers, an outer electron dense layer and an inner lamellar layer, further consisting of 10 sublayers of varying thicknesses. Collectively, it was observed that the morphological characteristics of the fertilized egg, fine structures surrounding the micropyle, outer surface, adhesive structure consisting adhesive filaments, and sections of fertilized egg envelope displayed species specificity.

本文利用光学显微镜和电子显微镜对Poropanchax normani (Poropanchax normani)受精卵的形态和受精卵包膜的精细结构进行了研究。Poropanchax normani属于Poeciliidae科,也被称为诺曼灯眼。受精卵卵周间隙狭窄,呈球形和凹陷状,卵黄膜中含有小油滴。此外,在受精卵的一侧观察到一束粘连的细丝。这些细丝具有非常高的弹性,长度约为1-3毫米。测定受精卵大小约为1.49±0.07 mm (n = 30)。外表面光滑,扫描电镜观察发现,在卵包膜表面不同位置产生的粘丝分布在卵包膜周围,并连接在一起形成一个单一的长束。微孔周围可见数条直皱形成的峰状结构。然而,由于其所处的深度,无法对微孔的完整结构进行研究。此外,确定卵包膜的总厚度约为12.5 - 14.5 μm。卵包膜由两个不同的层组成,一个外层电子致密层和一个内层层,再由10个不同厚度的亚层组成。总的来说,我们观察到受精卵的形态特征、微孔周围的精细结构、外表面、由粘附丝组成的粘附结构和受精卵包膜切片显示出物种特异性。
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引用次数: 0
Quantitative analysis of retained austenite in Nb added Fe-based alloy 加Nb铁基合金中残余奥氏体的定量分析
Q3 Immunology and Microbiology Pub Date : 2022-06-18 DOI: 10.1186/s42649-022-00074-1
Kwang Kyu Ko, Jin Ho Jang, Saurabh Tiwari, Hyo Ju Bae, Hyo Kyung Sung, Jung Gi Kim, Jae Bok Seol

The use of Pipelines for long-distance transportation of crude oil, natural gas and similar applications is increasing and has pivotal importance in recent times. High specific strength plays a crucial role in improving transport efficiency through increased pressure and improved laying efficiency through reduced diameter and weight of line pipes. TRIP-based high-strength and high-ductility alloys comprise a mixture of ferrite, bainite, and retained austenite that provide excellent mechanical properties such as dimensional stability, fatigue strength, and impact toughness. This study performs microstructure analysis using both Nital etching and LePera etching methods. At the time of Nital etching, it is difficult to distinctly observe second phase. However, using LePera etching conditions it is possible to distinctly measure the M/A phase and ferrite matrix. The fraction measurement was done using OM and SEM images which give similar results for the average volume fraction of the phases. Although it is possible to distinguish the M/A phase from the SEM image of the sample subjected to LePera etching. However, using Nital etching is nearly impossible. Nital etching is good at specific phase analysis than LePera etching when using SEM images.

在原油、天然气和类似应用的长距离运输中,管道的使用越来越多,近年来具有举足轻重的重要性。高比强度通过增加压力来提高输送效率,通过减小管线管径和重量来提高敷设效率,具有至关重要的作用。基于trip的高强度和高延展性合金由铁素体、贝氏体和残余奥氏体的混合物组成,具有优异的机械性能,如尺寸稳定性、疲劳强度和冲击韧性。本研究使用Nital蚀刻和LePera蚀刻方法进行微观结构分析。在初始蚀刻时,很难清晰地观察到第二相。然而,使用LePera蚀刻条件,可以清楚地测量M/A相和铁氧体基体。分数测量是用OM和SEM图像完成的,它们对相的平均体积分数给出了相似的结果。虽然可以从LePera蚀刻样品的SEM图像中区分M/A相。然而,使用Nital蚀刻几乎是不可能的。当使用SEM图像时,Nital蚀刻比LePera蚀刻具有更好的比相分析能力。
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引用次数: 2
Biological applications of the NanoSuit for electron imaging and X-microanalysis of insulating specimens NanoSuit在绝缘样品的电子成像和x微分析中的生物学应用
Q3 Immunology and Microbiology Pub Date : 2022-05-11 DOI: 10.1186/s42649-022-00073-2
Ki Woo Kim
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引用次数: 0
Biological applications of the NanoSuit for electron imaging and X-microanalysis of insulating specimens NanoSuit在绝缘样品的电子成像和x微分析中的生物学应用
Q3 Immunology and Microbiology Pub Date : 2022-05-11 DOI: 10.1186/s42649-022-00073-2
Ki Woo Kim

Field emission scanning electron microscopy (FESEM) is an essential tool for observing surface details of specimens in a high vacuum. A series of specimen procedures precludes the observations of living organisms, resulting in artifacts. To overcome these problems, Takahiko Hariyama and his colleagues proposed the concept of the “nanosuit” later referred to as “NanoSuit”, describing a thin polymer layer placed on organisms to protect them in a high vacuum in 2013. The NanoSuit is formed rapidly by (i) electron beam irradiation, (ii) plasma irradiation, (iii) Tween 20 solution immersion, and (iv) surface shield enhancer (SSE) solution immersion. Without chemical fixation and metal coating, the NanoSuit-formed specimens allowed structural preservation and accurate element detection of insulating, wet specimens at high spatial resolution. NanoSuit-formed larvae were able to resume normal growth following FESEM observation. The method has been employed to observe unfixed and uncoated bacteria, multicellular organisms, and paraffin sections. These results suggest that the NanoSuit can be applied to prolong life in vacuo and overcome the limit of dead imaging of electron microscopy.

场发射扫描电子显微镜(FESEM)是在高真空条件下观察样品表面细节的重要工具。一系列的标本程序排除了对活生物体的观察,导致人工制品。为了克服这些问题,Takahiko Hariyama和他的同事们在2013年提出了“纳米服”(后来被称为“纳米服”)的概念,描述了一种薄薄的聚合物层,可以在高真空环境下保护生物体。NanoSuit通过(i)电子束照射,(ii)等离子体照射,(iii) Tween 20溶液浸泡和(iv)表面屏蔽增强剂(SSE)溶液浸泡快速形成。在没有化学固定和金属涂层的情况下,nanosuit形成的样品可以在高空间分辨率下进行结构保存和准确的绝缘湿样品元素检测。通过FESEM观察,nanosuit形成的幼虫能够恢复正常生长。该方法已用于观察未固定和未包被的细菌、多细胞生物和石蜡切片。这些结果表明,NanoSuit可以用于延长真空寿命,克服电子显微镜死成像的限制。
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引用次数: 0
Analysis of microstructural characteristics and components of red and yellow ink pigments used in permanent makeup 永久彩妆用红、黄油墨颜料的显微结构特征及成分分析
Q3 Immunology and Microbiology Pub Date : 2022-04-11 DOI: 10.1186/s42649-022-00072-3
Hyun Sook Jin, Byung Soo Chang

Our purpose in this study is to analyze the microstructural characteristics and constituent elements of inorganic substances added to the yellow ink and red ink pigments used in permanent makeup. We observed the microstructural properties of inorganic pigments added to the ink using a scanning electron microscopy (SEM) and analyzed the constituent elements of the inorganic pigment particles using an energy dispersive X-ray spectroscopy (EDX). In red wine-colored ink, cubic titanium dioxide with a diameter of 110 to 200 nm was the major component, and rod-shaped iron oxide was rarely observed. Most of the ingredients of taupe yellow ink were rod-shaped yellow iron oxide, and a small amount of cubic titanium dioxide was observed. Red wine-colored ink and taupe yellow ink contained lumps composed of titanium dioxide particles. In red wine-colored ink, lumps were formed by agglomeration. However, we observed that the surface of the lump composed of titanium dioxide in the taupe yellow ink had a smooth surface caused by external physical compression. The titanium dioxide particle mass which found in taupe yellow ink in this study is an artificial product. When this mass accumulates in the dermis, it may cause a color mismatch. Therefore, permanent makeup using fine pigments should be free of foreign substances that may cause trouble in the skin. In addition, there is a need to improve the quality of the ink so that the required color can be safe and long lasting in the dermis.

本研究的目的是分析永久彩妆用黄墨和红墨颜料中添加的无机物的微观结构特征和组成元素。利用扫描电子显微镜(SEM)观察了添加到油墨中的无机颜料的微观结构特性,并利用能量色散x射线能谱(EDX)分析了无机颜料颗粒的组成元素。在红酒墨水中,主要成分是直径为110 ~ 200nm的立方二氧化钛,很少观察到棒状的氧化铁。灰黄色油墨的主要成分是棒状的黄色氧化铁,并观察到少量的立方二氧化钛。红色墨水和灰黄色墨水中含有由二氧化钛颗粒组成的块状物。在红酒色的墨水中,团块是通过凝聚形成的。然而,我们观察到灰黄色油墨中由二氧化钛组成的块状表面由于外部物理压缩而具有光滑的表面。本研究在灰黄色油墨中发现的二氧化钛颗粒质量是一种人工产物。当这种物质积聚在真皮层时,可能会导致颜色不匹配。因此,使用精细色素的永久化妆品应该不含可能对皮肤造成麻烦的外来物质。此外,还需要提高油墨的质量,使所要求的颜色能够在真皮层中安全持久。
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引用次数: 3
期刊
Applied Microscopy
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