首页 > 最新文献

Rhizosphere最新文献

英文 中文
Wheat density drives negative density dependence in nitrogen uptake and root plasticity in wheat–weed communities 小麦密度驱动小麦-杂草群落氮素吸收和根系可塑性的负密度依赖
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-03-01 Epub Date: 2025-12-04 DOI: 10.1016/j.rhisph.2025.101243
Li Zhang , Weiqiang Liu , Yizhong Rong , Jiazhen Xi , Lingfeng Mao , Anna Gunina , Zhen Zhang
Adverse density-dependent effects on competition outcomes (e.g., fecundity) are stronger within species than between them, promoting species coexistence. However, empirical evidence on the resource competition process (e.g., nitrogen, N) and on how plant root traits and fertilization alter this process remains unclear. We conducted a response-surface design competition experiment involving wheat and weeds (Avena fatua L. or Echinochloa crus-galli (L.) P. Beauv., i.e., WB and WO pair) across densities (4, 8, 12, 16 individuals per pot) and proportions (wheat:weed 0:1, 0.25:0.75, 0.5:0.5, 0.75:0.25, 1:0), and fertilization treatment. After seven months, root morphology traits were measured and NH4+ and NO3 uptake was studied using short-term 15N labeling. Without fertilization, high wheat density reduced wheat's root area (αii = −0.130 and −0.147 in WB and WO pairs) and length (−0.110; −0.120) while increasing specific root length (0.040; 0.062) and area (0.019; 0.035) to mitigate a reduction in NH4+ (−0.142) than NO3 (−0.205). Weeds reduced root length and NH4+ uptake. With fertilization, increasing wheat density decreased wheat and weed root length (αii = −0.117, αij = −0.238 in WB pair; αii = −0.117, αij = −0.181 in WO pair) and area (αii = −0.126, αij = −0.283; αii = −0.152, αij = −0.206), NH4+ii = −0.281; αij = −0.224), and NO3 uptake (αii = −0.079; αij = −0.326). Weeds also increased specific root length (0.220 and 0.079) and area (0.054 in the WO pair). These N reduction and root plasticity were not observed with increased weed density, suggesting that maintaining weed presence did not reduce wheat's N uptake. Our research indicated that weed management strategies should consider density-dependent N competition and root plasticity within agricultural systems.
物种内部对竞争结果(如繁殖力)的不利密度依赖效应强于物种之间,从而促进了物种共存。然而,关于资源竞争过程(如氮,N)以及植物根系性状和施肥如何改变这一过程的经验证据尚不清楚。以小麦和杂草(Avena fatua L.或Echinochloa cross -galli (L.))为研究对象,进行了响应面设计竞赛实验。测定。不同密度(4、8、12、16)和比例(小麦:杂草0:1、0.25:0.75、0.5:0.5、0.75:0.25、1:0)和施肥处理之间的差异(即WB和WO对)。7个月后,测定根系形态性状,并利用短期15N标记研究NH4+和NO3−吸收。在不施肥的情况下,高密度处理减少了小麦的根面积(αii = - 0.130和- 0.147,WB和WO对)和根长(- 0.110和- 0.120),增加了比根长(0.040和0.062)和比根面积(0.019和0.035),以缓解NH4+(- 0.142)比NO3−(- 0.205)的减少。杂草减少了根长和NH4+的吸收。与施肥,增加小麦密度降低小麦和杂草根长度(α2 = −0.117,αij = −0.238在世行;αii = −0.117,αij = −0.181在我们组)和地区(α2 = −0.126,αij = −0.283;αii = −0.152,αij = −0.206),NH4 +(α2 = −0.281;αij = −0.224),和3号−吸收(α2 = −0.079;αij = −0.326)。杂草也增加了比根长(0.220和0.079)和比根面积(0.054)。这些氮素的减少和根系的可塑性并没有随着杂草密度的增加而增加,这表明杂草的存在并没有降低小麦对氮的吸收。我们的研究表明,杂草管理策略应考虑农业系统内密度依赖性氮竞争和根系可塑性。
{"title":"Wheat density drives negative density dependence in nitrogen uptake and root plasticity in wheat–weed communities","authors":"Li Zhang ,&nbsp;Weiqiang Liu ,&nbsp;Yizhong Rong ,&nbsp;Jiazhen Xi ,&nbsp;Lingfeng Mao ,&nbsp;Anna Gunina ,&nbsp;Zhen Zhang","doi":"10.1016/j.rhisph.2025.101243","DOIUrl":"10.1016/j.rhisph.2025.101243","url":null,"abstract":"<div><div>Adverse density-dependent effects on competition outcomes (e.g., fecundity) are stronger within species than between them, promoting species coexistence. However, empirical evidence on the resource competition process (e.g., nitrogen, N) and on how plant root traits and fertilization alter this process remains unclear. We conducted a response-surface design competition experiment involving wheat and weeds (<em>Avena fatua</em> L. or <em>Echinochloa crus-galli</em> (L.) P. Beauv., i.e., WB and WO pair) across densities (4, 8, 12, 16 individuals per pot) and proportions (wheat:weed 0:1, 0.25:0.75, 0.5:0.5, 0.75:0.25, 1:0), and fertilization treatment. After seven months, root morphology traits were measured and NH<sub>4</sub><sup>+</sup> and NO<sub>3</sub><sup>−</sup> uptake was studied using short-term <sup>15</sup>N labeling. Without fertilization, high wheat density reduced wheat's root area (α<sub><em>ii</em></sub> = −0.130 and −0.147 in WB and WO pairs) and length (−0.110; −0.120) while increasing specific root length (0.040; 0.062) and area (0.019; 0.035) to mitigate a reduction in NH<sub>4</sub><sup>+</sup> (−0.142) than NO<sub>3</sub><sup>−</sup> (−0.205). Weeds reduced root length and NH<sub>4</sub><sup>+</sup> uptake. With fertilization, increasing wheat density decreased wheat and weed root length (α<sub><em>ii</em></sub> = −0.117, α<sub><em>ij</em></sub> = −0.238 in WB pair; α<sub><em>ii</em></sub> = −0.117, α<sub><em>ij</em></sub> = −0.181 in WO pair) and area (α<sub><em>ii</em></sub> = −0.126, α<sub><em>ij</em></sub> = −0.283; α<sub><em>ii</em></sub> = −0.152, α<sub><em>ij</em></sub> = −0.206), NH<sub>4</sub><sup>+</sup> (α<sub><em>ii</em></sub> = −0.281; α<sub><em>ij</em></sub> = −0.224), and NO<sub>3</sub><sup>−</sup> uptake (α<sub><em>ii</em></sub> = −0.079; α<sub><em>ij</em></sub> = −0.326). Weeds also increased specific root length (0.220 and 0.079) and area (0.054 in the WO pair). These N reduction and root plasticity were not observed with increased weed density, suggesting that maintaining weed presence did not reduce wheat's N uptake. Our research indicated that weed management strategies should consider density-dependent N competition and root plasticity within agricultural systems.</div></div>","PeriodicalId":48589,"journal":{"name":"Rhizosphere","volume":"37 ","pages":"Article 101243"},"PeriodicalIF":3.5,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145749556","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
The extracellular polymeric substances and plants drive soil structural reinforcement and water retention in ground fissures 胞外高分子物质和植物驱动土壤结构加固和地裂缝中的保水
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-03-01 Epub Date: 2026-01-08 DOI: 10.1016/j.rhisph.2026.101263
Haining Yu , Yinli Bi , Kaiwei Xu , Suping Peng , Yang Zhou , Yinchu Qiao
Underground mining in arid and semi-arid regions of western China has resulted in the widespread formation of ground fissures, leading to soil structure degradation and water loss, which severely constrain vegetation restoration. Although extracellular polymeric substances (EPS) have shown great potential in soil improvement, the effectiveness under strongly disturbed fissure conditions and the synergistic effects with plants remain poorly understood. This study investigated the individual and synergistic effects of EPS and plants on soil structure and water retention capacity in areas affected by ground fissures, aiming to provide a theoretical foundation for ecological restoration in mining-impacted areas. A soil column simulation experiment was conducted under four treatments: untreated control (CK), EPS sprayed on the surface of fissure areas (EPS), plants grown near fissures (PL), and combined EPS application and plant treatment (PE). The stability of plant growth parameters, soil water content, soil aggregates, and pore structure were systematically analyzed. The results showed that EPS significantly promoted both aboveground and belowground biomass accumulation and root development. Compared with the PL treatment, the PE treatment increased root length, number of root tips, root projection area, root volume, and root surface area by 28.3 %, 114.3 %, 16.5 %, 126.9 %, and 22.9 %, respectively. The synergistic effects between EPS and roots significantly enhanced the shear strength and cohesion of the root-soil composite, increasing the shear strength by 18.0 % at 400 kPa confining pressure compared to the CK treatment. Both EPS and plants reduced soil water loss in fissure areas, with the PE treatment showing the highest water retention capacity. Furthermore, EPS and plants jointly improved soil structure by increasing the proportion of large macroaggregates (LMA) and enhancing pore connectivity. Relative to CK, the proportion of LMA increased by 26.5 %, 18.1 %, and 37.2 % under EPS, PL, and PE treatments, respectively. These findings demonstrate that EPS, by promoting plant growth and forming stable root-soil composite, substantially enhances soil water retention capacity and mechanical stability, providing a scientific basis for ecological restoration in fissure areas.
中国西部干旱半干旱区地下开采导致地裂缝广泛形成,导致土壤结构退化和水分流失,严重制约植被恢复。尽管胞外聚合物(EPS)在土壤改良中显示出巨大的潜力,但其在强扰动裂缝条件下的有效性以及与植物的协同效应尚不清楚。本研究探讨了EPS和植物对地裂缝影响地区土壤结构和保水能力的个体效应和协同效应,旨在为矿区生态修复提供理论依据。采用无处理对照(CK)、裂缝区表面喷施EPS (EPS)、裂缝附近种植(PL)和EPS与植物处理(PE)联合施用4种处理,进行了土壤柱模拟试验。系统分析了植物生长参数、土壤含水量、土壤团聚体和孔隙结构的稳定性。结果表明,EPS对地上、地下生物量积累和根系发育均有显著促进作用。与PL处理相比,PE处理的根长、根尖数、根突出面积、根体积和根表面积分别增加了28.3 %、114.3 %、16.5 %、126.9 %和22.9 %。EPS与根系的协同作用显著提高了根土复合材料的抗剪强度和黏聚力,在400 kPa围压下,与CK相比,抗剪强度提高了18.0 %。EPS和植物处理均能减少裂缝区土壤水分流失,其中PE处理的保水能力最强。此外,EPS和植物通过增加大团聚体(LMA)的比例和增强孔隙连通性,共同改善了土壤结构。与对照相比,EPS、PL和PE处理的LMA比例分别提高了26.5% %、18.1% %和37.2% %。综上所述,EPS通过促进植物生长和形成稳定的根土复合,显著提高了土壤的保水性和力学稳定性,为裂隙区生态修复提供了科学依据。
{"title":"The extracellular polymeric substances and plants drive soil structural reinforcement and water retention in ground fissures","authors":"Haining Yu ,&nbsp;Yinli Bi ,&nbsp;Kaiwei Xu ,&nbsp;Suping Peng ,&nbsp;Yang Zhou ,&nbsp;Yinchu Qiao","doi":"10.1016/j.rhisph.2026.101263","DOIUrl":"10.1016/j.rhisph.2026.101263","url":null,"abstract":"<div><div>Underground mining in arid and semi-arid regions of western China has resulted in the widespread formation of ground fissures, leading to soil structure degradation and water loss, which severely constrain vegetation restoration. Although extracellular polymeric substances (EPS) have shown great potential in soil improvement, the effectiveness under strongly disturbed fissure conditions and the synergistic effects with plants remain poorly understood. This study investigated the individual and synergistic effects of EPS and plants on soil structure and water retention capacity in areas affected by ground fissures, aiming to provide a theoretical foundation for ecological restoration in mining-impacted areas. A soil column simulation experiment was conducted under four treatments: untreated control (CK), EPS sprayed on the surface of fissure areas (EPS), plants grown near fissures (PL), and combined EPS application and plant treatment (PE). The stability of plant growth parameters, soil water content, soil aggregates, and pore structure were systematically analyzed. The results showed that EPS significantly promoted both aboveground and belowground biomass accumulation and root development. Compared with the PL treatment, the PE treatment increased root length, number of root tips, root projection area, root volume, and root surface area by 28.3 %, 114.3 %, 16.5 %, 126.9 %, and 22.9 %, respectively. The synergistic effects between EPS and roots significantly enhanced the shear strength and cohesion of the root-soil composite, increasing the shear strength by 18.0 % at 400 kPa confining pressure compared to the CK treatment. Both EPS and plants reduced soil water loss in fissure areas, with the PE treatment showing the highest water retention capacity. Furthermore, EPS and plants jointly improved soil structure by increasing the proportion of large macroaggregates (LMA) and enhancing pore connectivity. Relative to CK, the proportion of LMA increased by 26.5 %, 18.1 %, and 37.2 % under EPS, PL, and PE treatments, respectively. These findings demonstrate that EPS, by promoting plant growth and forming stable root-soil composite, substantially enhances soil water retention capacity and mechanical stability, providing a scientific basis for ecological restoration in fissure areas.</div></div>","PeriodicalId":48589,"journal":{"name":"Rhizosphere","volume":"37 ","pages":"Article 101263"},"PeriodicalIF":3.5,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145977514","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Rhizosphere reprogramming for PAH detoxification: Microbial phytoremediation and engineering strategies 多环芳烃解毒的根际重编程:微生物植物修复和工程策略
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-03-01 Epub Date: 2026-01-09 DOI: 10.1016/j.rhisph.2026.101270
Shumaila Parveen , Zaryab Shafi , Waquar Akhter Ansari , Talat Ilyas , Mohammad Shahid , Sajad Ali
Polycyclic aromatic hydrocarbons (PAHs) are major constraints in soil pollution owing to their long-term persistence, limited bioavailability and toxicity. This review explores microbe - meditated rhizosphere engineering to enhance PAH phytoremediation, emphasizing rhizobacterial degradation and molecular engineering. Microbial based remediation and rhizosphere engineering are one of the prime and sustainable approaches for effective PAH remediation however, it may require integrated rather than standalone approaches. Plant growth–promoting rhizobacteria can facilitate PAH transformation through oxygenase-driven catabolic pathways, biofilm formation, and root stress modulation via ACC deaminase and phytohormone signaling. Advances in genetic engineering, CRISPR-based editing, and synthetic microbial consortia enable precise enhancement of catabolic functions and stability in complex soils. Omics-enabled analyses reveal microbial interactions, metabolic fluxes, and regulatory networks driving rhizosphere PAH turnover, guiding rational system design. Integrative strategies incorporating biochar, nanomaterials, and engineered consortia enhance contaminant bioavailability and degradation efficiency. Collectively, these advances establish rhizosphere engineering as a scalable framework for PAH phytoremediation under field conditions.
多环芳烃(PAHs)具有长期持久性、有限的生物利用度和毒性,是土壤污染的主要制约因素。本文综述了微生物介导的根际工程对多环芳烃植物修复的影响,重点介绍了根际细菌降解和分子工程。基于微生物的修复和根际工程是有效的多环芳烃修复的主要和可持续的方法之一,然而,它可能需要综合而不是独立的方法。促进植物生长的根细菌可以通过氧合酶驱动的分解代谢途径、生物膜的形成以及ACC脱氨酶和植物激素信号介导的根胁迫调节来促进多环芳烃的转化。基因工程、基于crispr的编辑和合成微生物群落的进步使复杂土壤中的分解代谢功能和稳定性得以精确增强。组学分析揭示了微生物相互作用、代谢通量和调控网络驱动根际多环芳烃转化,指导合理的系统设计。结合生物炭、纳米材料和工程财团的综合策略提高了污染物的生物利用度和降解效率。总的来说,这些进展使根际工程成为田间条件下多环芳烃植物修复的可扩展框架。
{"title":"Rhizosphere reprogramming for PAH detoxification: Microbial phytoremediation and engineering strategies","authors":"Shumaila Parveen ,&nbsp;Zaryab Shafi ,&nbsp;Waquar Akhter Ansari ,&nbsp;Talat Ilyas ,&nbsp;Mohammad Shahid ,&nbsp;Sajad Ali","doi":"10.1016/j.rhisph.2026.101270","DOIUrl":"10.1016/j.rhisph.2026.101270","url":null,"abstract":"<div><div>Polycyclic aromatic hydrocarbons (PAHs) are major constraints in soil pollution owing to their long-term persistence, limited bioavailability and toxicity. This review explores microbe - meditated rhizosphere engineering to enhance PAH phytoremediation, emphasizing rhizobacterial degradation and molecular engineering. Microbial based remediation and rhizosphere engineering are one of the prime and sustainable approaches for effective PAH remediation however, it may require integrated rather than standalone approaches. Plant growth–promoting rhizobacteria can facilitate PAH transformation through oxygenase-driven catabolic pathways, biofilm formation, and root stress modulation via ACC deaminase and phytohormone signaling. Advances in genetic engineering, CRISPR-based editing, and synthetic microbial consortia enable precise enhancement of catabolic functions and stability in complex soils. Omics-enabled analyses reveal microbial interactions, metabolic fluxes, and regulatory networks driving rhizosphere PAH turnover, guiding rational system design. Integrative strategies incorporating biochar, nanomaterials, and engineered consortia enhance contaminant bioavailability and degradation efficiency. Collectively, these advances establish rhizosphere engineering as a scalable framework for PAH phytoremediation under field conditions.</div></div>","PeriodicalId":48589,"journal":{"name":"Rhizosphere","volume":"37 ","pages":"Article 101270"},"PeriodicalIF":3.5,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146037965","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Bacillus velezensis synergizes with coal gangue to enhance Medicago sativa growth: Insights into nutrient cycling and soil fertility enhancement 玉米芽孢杆菌与煤矸石协同作用促进紫花苜蓿生长:养分循环和土壤肥力增强的新认识
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-03-01 Epub Date: 2026-02-03 DOI: 10.1016/j.rhisph.2026.101289
Yaya Wang , Mingwu Liu , Zijie Xi , Kuanysh T. Tastambek , Meili Du , Xiangrong Liu , Xuan Xie , Ru Zhang , Nuraly S. Akimbekov
Accumulation of coal gangue generates substantial risks to both the environment and public health, highlighting the need for effective and sustainable remediation approaches. This study demonstrates that microbial-assisted utilization through Bacillus velezensis (B. velezensis) synergizes with coal gangue, significantly enhancing the growth and germination rate of Medicago sativa (alfalfa). Detailed analysis revealed that this co-treatment notably improved soil fertility by increasing levels of organic matter, dissolved organic carbon, humic-like substances, and key nutrients, including total nitrogen, potassium, and phosphorus. Additionally, soil enzymatic activities, including urease, amylase, laccase, protease, phosphatase, and 1-Aminocyclopropane-1-Carboxylate deaminase, were elevated, along with the production of indole-3-acetic acid. Microbial analysis showed that the addition of B. velezensis enhanced operational taxonomic unit (OTU) richness and significantly increased Bacillus abundance. Metagenomic and qPCR analysis further revealed the expression of key functional genes, including trpCDE (IAA biosynthesis), nifK (nitrogen fixation), KdpAB (potassium transport), and phnCD (phosphorus cycling). This genetic reprogramming enhanced nutrient cycling while amplifying phytohormonal and enzymatic pathways. Overall, this study presents a promising strategy for the sustainable utilization of coal gangue, contributing to soil fertility enhancement and advancing circular economy solutions for coal-mining regions.
煤矸石的积累对环境和公众健康都构成重大风险,因此需要采取有效和可持续的补救办法。本研究表明,通过velezensis芽孢杆菌(B. velezensis)对煤矸石进行微生物辅助利用,可显著提高紫花苜蓿的生长和发芽率。详细分析表明,这种共处理通过提高有机质、溶解有机碳、腐殖质样物质和全氮、全钾、全磷等关键营养物质的水平,显著提高了土壤肥力。此外,土壤酶活性,包括脲酶、淀粉酶、漆酶、蛋白酶、磷酸酶和1-氨基环丙烷-1-羧酸脱氨酶,随着吲哚-3-乙酸的产生而升高。微生物学分析结果表明,B. velezensis的添加提高了操作分类单位(OTU)丰富度,显著提高了芽孢杆菌的丰度。宏基因组和qPCR分析进一步揭示了关键功能基因的表达,包括trpCDE (IAA生物合成)、nifK(固氮)、KdpAB(钾转运)和phnCD(磷循环)。这种基因重编程增强了营养循环,同时放大了植物激素和酶的途径。总的来说,本研究为煤矸石的可持续利用提供了一个有希望的策略,有助于提高土壤肥力,并为煤矿区提供循环经济解决方案。
{"title":"Bacillus velezensis synergizes with coal gangue to enhance Medicago sativa growth: Insights into nutrient cycling and soil fertility enhancement","authors":"Yaya Wang ,&nbsp;Mingwu Liu ,&nbsp;Zijie Xi ,&nbsp;Kuanysh T. Tastambek ,&nbsp;Meili Du ,&nbsp;Xiangrong Liu ,&nbsp;Xuan Xie ,&nbsp;Ru Zhang ,&nbsp;Nuraly S. Akimbekov","doi":"10.1016/j.rhisph.2026.101289","DOIUrl":"10.1016/j.rhisph.2026.101289","url":null,"abstract":"<div><div>Accumulation of coal gangue generates substantial risks to both the environment and public health, highlighting the need for effective and sustainable remediation approaches. This study demonstrates that microbial-assisted utilization through <em>Bacillus velezensis</em> (<em>B. velezensis</em>) synergizes with coal gangue, significantly enhancing the growth and germination rate of <em>Medicago sativa</em> (alfalfa). Detailed analysis revealed that this co-treatment notably improved soil fertility by increasing levels of organic matter, dissolved organic carbon, humic-like substances, and key nutrients, including total nitrogen, potassium, and phosphorus. Additionally, soil enzymatic activities, including urease, amylase, laccase, protease, phosphatase, and 1-Aminocyclopropane-1-Carboxylate deaminase, were elevated, along with the production of indole-3-acetic acid. Microbial analysis showed that the addition of <em>B. velezensis</em> enhanced operational taxonomic unit (OTU) richness and significantly increased <em>Bacillus</em> abundance. Metagenomic and qPCR analysis further revealed the expression of key functional genes, including <em>trpCDE</em> (IAA biosynthesis), <em>nifK</em> (nitrogen fixation), <em>KdpAB</em> (potassium transport), and <em>phnCD</em> (phosphorus cycling). This genetic reprogramming enhanced nutrient cycling while amplifying phytohormonal and enzymatic pathways. Overall, this study presents a promising strategy for the sustainable utilization of coal gangue, contributing to soil fertility enhancement and advancing circular economy solutions for coal-mining regions.</div></div>","PeriodicalId":48589,"journal":{"name":"Rhizosphere","volume":"37 ","pages":"Article 101289"},"PeriodicalIF":3.5,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146188452","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Vegetation restoration governs the changes in soil preferential flow and matrix infiltration 植被恢复控制着土壤优先流和基质入渗的变化
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-03-01 Epub Date: 2026-01-07 DOI: 10.1016/j.rhisph.2026.101258
Lin Zhang, Tianheng Zhao, Shi Qi
Soil infiltration consists of preferential flow and matrix flow, both of which play a critical role in regulating soil water redistribution and the hydrological cycle. However, how different vegetation restoration types influence the partitioning between preferential flow and matrix infiltration remains poorly understood. Three typical vegetation restoration types of Moso bamboo pure forest, Moso bamboo-Chinese fir mixed forest and Chinese fir pure forest in the subtropical regions of southern China were selected, and the soil preferential flow and matrix flow were measured by using the improved surface-mounted double-ring infiltrometer. The effects of the driving factors on the preferential flow and matrix infiltration were quantified.

Results

1) The preferential flow were 2.31–4.36 times greater than the matrix infiltration, accounting for 79.5 %–81.3 % of the total infiltration (TIA) in Moso bamboo pure forest, 74.9 %–77.0 % of the TIA in Moso bamboo–Chinese fir mixed forest, and 69.8 %–72.5 % of the TIA in Chinese fir pure forest; 2) The total infiltration (560.54–739.47 mm) and preferential flow (425.68–595.81 mm) followed the order: Moso bamboo pure forest > Moso bamboo–Chinese fir mixed forest > Chinese fir pure forest. The cumulative matrix infiltration (136.62–184.20 mm) followed the order: Chinese fir pure forest > Moso bamboo–Chinese fir mixed forest > Moso bamboo pure forest. Fine root biomass (<2 mm), NCP, and BD were the dominant factors influencing the preferential flow, jointly accounting for 55.3 % of the contribution. Fine root biomass (<2 mm), clay, and BD showed close correlations with matrix infiltration, collectively explaining 60.6 % of the contribution. The findings provide mechanistic insights into soil hydrological functioning under different restoration strategies and offer practical implications for optimizing vegetation management and improving water conservation in subtropical ecosystems.
土壤入渗包括优先流和基质流,两者在调节土壤水分再分配和水文循环中起着关键作用。然而,不同植被恢复类型对优先流和基质入渗分配的影响尚不清楚。选取南方亚热带毛竹纯林、毛竹杉木混交林和杉木纯林3种典型植被恢复类型,采用改进型面装双环入渗仪测量土壤优先流和基质流。定量分析了驱动因素对优先流和基质入渗的影响。结果1)优先流量是基质入渗的2.31 ~ 4.36倍,占毛竹纯林总入渗(TIA)的79.5 % ~ 81.3 %,毛竹-杉木混交林总入渗(TIA)的74.9 % ~ 77.0 %,杉木纯林总入渗(TIA)的69.8 % ~ 72.5 %;2)总入渗(5600.54 ~ 739.47 mm)和优先流量(425.68 ~ 595.81 mm)顺序为:毛竹纯林 >; 毛竹杉木混交林 >; 杉木纯林。累积基质入渗(136.62 ~ 184.20 mm)大小顺序为:杉木纯林 >; 毛竹-杉木混交林 >; 毛竹纯林。细根生物量(<2 mm)、NCP和BD是影响优先流的主要因素,共占55.3% %。细根生物量(<2 mm)、粘土和BD与基质入渗密切相关,共同解释了60.6% %的贡献。研究结果为不同恢复策略下土壤水文功能的机理研究提供了新的思路,并为优化亚热带生态系统植被管理和提高水土保持水平提供了实践意义。
{"title":"Vegetation restoration governs the changes in soil preferential flow and matrix infiltration","authors":"Lin Zhang,&nbsp;Tianheng Zhao,&nbsp;Shi Qi","doi":"10.1016/j.rhisph.2026.101258","DOIUrl":"10.1016/j.rhisph.2026.101258","url":null,"abstract":"<div><div>Soil infiltration consists of preferential flow and matrix flow, both of which play a critical role in regulating soil water redistribution and the hydrological cycle. However, how different vegetation restoration types influence the partitioning between preferential flow and matrix infiltration remains poorly understood. Three typical vegetation restoration types of Moso bamboo pure forest, Moso bamboo-Chinese fir mixed forest and Chinese fir pure forest in the subtropical regions of southern China were selected, and the soil preferential flow and matrix flow were measured by using the improved surface-mounted double-ring infiltrometer. The effects of the driving factors on the preferential flow and matrix infiltration were quantified.</div></div><div><h3>Results</h3><div>1) The preferential flow were 2.31–4.36 times greater than the matrix infiltration, accounting for 79.5 %–81.3 % of the total infiltration (TIA) in Moso bamboo pure forest, 74.9 %–77.0 % of the TIA in Moso bamboo–Chinese fir mixed forest, and 69.8 %–72.5 % of the TIA in Chinese fir pure forest; 2) The total infiltration (560.54–739.47 mm) and preferential flow (425.68–595.81 mm) followed the order: Moso bamboo pure forest &gt; Moso bamboo–Chinese fir mixed forest &gt; Chinese fir pure forest. The cumulative matrix infiltration (136.62–184.20 mm) followed the order: Chinese fir pure forest &gt; Moso bamboo–Chinese fir mixed forest &gt; Moso bamboo pure forest. Fine root biomass (&lt;2 mm), NCP, and BD were the dominant factors influencing the preferential flow, jointly accounting for 55.3 % of the contribution. Fine root biomass (&lt;2 mm), clay, and BD showed close correlations with matrix infiltration, collectively explaining 60.6 % of the contribution. The findings provide mechanistic insights into soil hydrological functioning under different restoration strategies and offer practical implications for optimizing vegetation management and improving water conservation in subtropical ecosystems.</div></div>","PeriodicalId":48589,"journal":{"name":"Rhizosphere","volume":"37 ","pages":"Article 101258"},"PeriodicalIF":3.5,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145939444","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Hyphosphere metabolic reprogramming in lipids and aromatic amino acids drives differential mycorrhizal growth promotion in trifoliate orange 脂质和芳香氨基酸的脂球代谢重编程驱动三叶橙菌根生长的差异促进
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-03-01 Epub Date: 2026-01-25 DOI: 10.1016/j.rhisph.2026.101280
Hao-Ran Jiang , Wan-Lin Fu , Ci Deng , Ying-Ning Zou , Mashael Daghash Alqahtani , Qiang-Sheng Wu
Arbuscular mycorrhizal (AM) fungi play a crucial role in plant growth and ecosystem functioning by regulating the rhizosphere microenvironment through their extensive extraradical hyphal networks. However, hyphal exudates are intimately mixed with root deposits and native organic matter in natural soil, making it difficult to isolate the specific chemical contributions of the hyphae themselves. To directly investigate the regulatory effects of extraradical hyphae from different AM fungi on the microenvironment, this study used trifoliate orange colonized by Funneliformis mosseae (Fm) and Rhizophagus intraradices (Ri) in a two-compartment rootbox where the root and hyphal compartments were separated by a 37 μm nylon mesh, with the hyphal compartment filled with high-temperature-ashed (550 °C for 24 h) sand to eliminate organic matter interference. The Fm treatment showed higher root colonization and greater soil hyphal length in the root compartment compared to Ri, although the nylon mesh barrier restricted hyphal extension into the hyphal compartment. Inoculation with either fungus significantly increased leaf, stem, and root biomass, with Ri promoting significantly greater biomass accumulation across all tissues than Fm. Untargeted metabolomic analysis of the sand matrix from the hyphal compartment identified 588 differential metabolites across all pairwise comparisons. The number and regulation pattern of these metabolites varied significantly, with the control vs Fm comparison showing 481 differential metabolites (162 upregulated and 319 downregulated), control vs Ri having 504 (213 upregulated and 291 downregulated), and Fm vs Ri yielding 448 (312 upregulated and 136 downregulated). Notably, the polyacetylene lobetyolin was upregulated specifically in the Fm vs Ri comparison, while the oxylipin 11-oxatetradecanoic acid was downregulated in the same contrast. The chalcone derivative 5′-fluoro-2′-hydroxy-4-methylchalcone showed divergent regulation, being downregulated in control vs Fm but upregulated in Fm vs Ri, highlighting comparison-specific metabolic reprogramming. KEGG pathway enrichment analysis revealed that these differential metabolites were significantly enriched in key pathways including phenylalanine, tyrosine, and tryptophan biosynthesis (the shikimate pathway), fatty acid biosynthesis, unsaturated fatty acid metabolism, and folate metabolism. Notably, Ri treatment exhibited stronger enrichment in unsaturated fatty acid biosynthesis and ubiquinone metabolism compared to Fm. The findings reveal that species-specific hyphosphere metabolic reprogramming, particularly in lipids and aromatic amino acids, rather than colonization extent, determines the differential growth promotion of trifoliate orange by AM fungi.
丛枝菌根真菌(AM)通过其广泛的根外菌丝网络调节根际微环境,在植物生长和生态系统功能中起着至关重要的作用。然而,菌丝渗出物与天然土壤中的根沉积物和天然有机质密切混合,因此很难分离出菌丝本身的特定化学贡献。为了直接研究不同AM真菌的根外菌丝对微环境的调控作用,本研究将由mosseae (Fm)和Rhizophagus intraradices (Ri)定植的三叶橙放在双室根箱中,根室和菌丝室用37 μm尼龙网隔开,菌丝室用高温(550 °C, 24 h)砂填充,以消除有机物干扰。尽管尼龙网屏障限制了菌丝向菌丝室的延伸,但Fm处理的根定植量和根室土壤菌丝长度均高于Ri处理。接种任何一种真菌都显著增加了叶片、茎和根的生物量,其中Ri促进所有组织的生物量积累显著高于Fm。对菌丝室沙基质的非靶向代谢组学分析在所有两两比较中鉴定出588种差异代谢物。这些代谢物的数量和调节模式差异显著,对照与调剂比较显示481种差异代谢物(162种上调,319种下调),对照与调剂有504种差异代谢物(213种上调,291种下调),调剂与调剂产生448种差异代谢物(312种上调,136种下调)。值得注意的是,在Fm和Ri的比较中,聚乙炔lobetyolin特异性上调,而在相同的对比中,氧脂素11-草酸四十四烷酸下调。查尔酮衍生物5 ' -氟-2 ' -羟基-4-甲基查尔酮表现出不同的调控,在对照对照中下调,而在对照对照中上调,突出了比较特异性的代谢重编程。KEGG途径富集分析显示,这些差异代谢物在苯丙氨酸、酪氨酸和色氨酸生物合成(莽草酸途径)、脂肪酸生物合成、不饱和脂肪酸代谢和叶酸代谢等关键途径中显著富集。值得注意的是,与Fm相比,Ri处理在不饱和脂肪酸生物合成和泛醌代谢方面表现出更强的富集。研究结果表明,AM真菌对三叶橙生长促进的差异不是定殖程度,而是物种特异性的丝球代谢重编程,特别是脂质和芳香氨基酸的代谢重编程。
{"title":"Hyphosphere metabolic reprogramming in lipids and aromatic amino acids drives differential mycorrhizal growth promotion in trifoliate orange","authors":"Hao-Ran Jiang ,&nbsp;Wan-Lin Fu ,&nbsp;Ci Deng ,&nbsp;Ying-Ning Zou ,&nbsp;Mashael Daghash Alqahtani ,&nbsp;Qiang-Sheng Wu","doi":"10.1016/j.rhisph.2026.101280","DOIUrl":"10.1016/j.rhisph.2026.101280","url":null,"abstract":"<div><div>Arbuscular mycorrhizal (AM) fungi play a crucial role in plant growth and ecosystem functioning by regulating the rhizosphere microenvironment through their extensive extraradical hyphal networks. However, hyphal exudates are intimately mixed with root deposits and native organic matter in natural soil, making it difficult to isolate the specific chemical contributions of the hyphae themselves. To directly investigate the regulatory effects of extraradical hyphae from different AM fungi on the microenvironment, this study used trifoliate orange colonized by <em>Funneliformis mosseae</em> (<em>Fm</em>) and <em>Rhizophagus intraradices</em> (<em>Ri</em>) in a two-compartment rootbox where the root and hyphal compartments were separated by a 37 μm nylon mesh, with the hyphal compartment filled with high-temperature-ashed (550 °C for 24 h) sand to eliminate organic matter interference. The <em>Fm</em> treatment showed higher root colonization and greater soil hyphal length in the root compartment compared to <em>Ri</em>, although the nylon mesh barrier restricted hyphal extension into the hyphal compartment. Inoculation with either fungus significantly increased leaf, stem, and root biomass, with <em>Ri</em> promoting significantly greater biomass accumulation across all tissues than <em>Fm</em>. Untargeted metabolomic analysis of the sand matrix from the hyphal compartment identified 588 differential metabolites across all pairwise comparisons. The number and regulation pattern of these metabolites varied significantly, with the control vs <em>Fm</em> comparison showing 481 differential metabolites (162 upregulated and 319 downregulated), control vs <em>Ri</em> having 504 (213 upregulated and 291 downregulated), and <em>Fm</em> vs <em>Ri</em> yielding 448 (312 upregulated and 136 downregulated). Notably, the polyacetylene lobetyolin was upregulated specifically in the <em>Fm vs Ri</em> comparison, while the oxylipin 11-oxatetradecanoic acid was downregulated in the same contrast. The chalcone derivative 5′-fluoro-2′-hydroxy-4-methylchalcone showed divergent regulation, being downregulated in control vs <em>Fm</em> but upregulated in <em>Fm vs Ri</em>, highlighting comparison-specific metabolic reprogramming. KEGG pathway enrichment analysis revealed that these differential metabolites were significantly enriched in key pathways including phenylalanine, tyrosine, and tryptophan biosynthesis (the shikimate pathway), fatty acid biosynthesis, unsaturated fatty acid metabolism, and folate metabolism. Notably, <em>Ri</em> treatment exhibited stronger enrichment in unsaturated fatty acid biosynthesis and ubiquinone metabolism compared to <em>Fm</em>. The findings reveal that species-specific hyphosphere metabolic reprogramming, particularly in lipids and aromatic amino acids, rather than colonization extent, determines the differential growth promotion of trifoliate orange by AM fungi.</div></div>","PeriodicalId":48589,"journal":{"name":"Rhizosphere","volume":"37 ","pages":"Article 101280"},"PeriodicalIF":3.5,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146077811","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Connecting soil spatial heterogeneities and grapevine root system architecture in California's Central Valley using non-invasive geophysical methods 使用非侵入性地球物理方法连接加利福尼亚中央山谷的土壤空间异质性和葡萄藤根系结构
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-03-01 Epub Date: 2025-12-12 DOI: 10.1016/j.rhisph.2025.101247
Solomon Ehosioke , Sam Dudley , Andrew J. McElrone , Megan Bartlett , Gordon Osterman
Soil spatial heterogeneity significantly impacts grapevine performance and water-use efficiency, yet understanding the intricate belowground dynamics remains a challenge. This study integrates non-invasive geophysical methods with physiological measurements and root morphology analysis to investigate the influence of soil variability on two grapevine rootstocks, Millardet et de Grasset 101-14 (101-14 Mgt) and Richter 110 (110R), in California's Central Valley. Electromagnetic induction and electrical resistivity tomography were used to map soil spatial heterogeneity, revealing distinct soil units (Yolo silt loam and Reiff very fine sandy loam) with varying physical and hydraulic properties. Electrical capacitance measurement successfully evaluated root system size as we found a positive correlation between root electrical capacitance and root dry mass in both rootstocks. Our results also show that root capacitance was consistently higher in the high vigor and drought resistant 110R than in the moderate vigor and drought sensitive 101-14, highlighting root system differences between the rootstocks. Furthermore, we found that vine water status, indicated by stem water potential and stomatal conductance, varied significantly between rootstocks and locations, and are driven by the underlying soil properties. This research demonstrates the utility of integrating geophysical and electrical methods for field-based phenotyping, providing novel insights into the soil-plant continuum. These findings highlight the potential of agrogeophysics for characterizing vineyard spatial heterogeneity to inform site-specific vineyard management, optimize irrigation strategies, and aid in rootstock selection for enhanced drought resilience without the need for labor intensive excavations.
土壤空间异质性显著影响葡萄产量和水分利用效率,但了解复杂的地下动态仍然是一个挑战。本研究将非侵入性地球物理方法与生理测量和根系形态分析相结合,研究了土壤变异对加利福尼亚中央山谷两种葡萄砧木Millardet et de Grasset 101-14 (101-14 Mgt)和Richter 110 (110R)的影响。利用电磁感应和电阻率层析成像技术绘制土壤空间异质性,揭示了具有不同物理和水力特性的不同土壤单元(Yolo粉质壤土和Reiff极细砂质壤土)。电容测量成功地评估了根系大小,因为我们发现根电容与根干质量呈正相关。结果还表明,高强抗旱品种的根系电容值始终高于中强抗旱品种101-14,突出了不同砧木间的根系差异。此外,我们还发现,以茎水势和气孔导度为表征的葡萄水分状况在不同的砧木和地点之间存在显著差异,并受下伏土壤性质的驱动。这项研究展示了整合地球物理和电方法的实用性,为土壤-植物连续体提供了新的见解。这些发现强调了农业地球物理学在描述葡萄园空间异质性方面的潜力,可以为特定地点的葡萄园管理提供信息,优化灌溉策略,并帮助选择砧木以增强抗旱能力,而无需进行劳动密集型的挖掘。
{"title":"Connecting soil spatial heterogeneities and grapevine root system architecture in California's Central Valley using non-invasive geophysical methods","authors":"Solomon Ehosioke ,&nbsp;Sam Dudley ,&nbsp;Andrew J. McElrone ,&nbsp;Megan Bartlett ,&nbsp;Gordon Osterman","doi":"10.1016/j.rhisph.2025.101247","DOIUrl":"10.1016/j.rhisph.2025.101247","url":null,"abstract":"<div><div>Soil spatial heterogeneity significantly impacts grapevine performance and water-use efficiency, yet understanding the intricate belowground dynamics remains a challenge. This study integrates non-invasive geophysical methods with physiological measurements and root morphology analysis to investigate the influence of soil variability on two grapevine rootstocks, Millardet et de Grasset 101-14 (101-14 Mgt) and Richter 110 (110R), in California's Central Valley. Electromagnetic induction and electrical resistivity tomography were used to map soil spatial heterogeneity, revealing distinct soil units (Yolo silt loam and Reiff very fine sandy loam) with varying physical and hydraulic properties. Electrical capacitance measurement successfully evaluated root system size as we found a positive correlation between root electrical capacitance and root dry mass in both rootstocks. Our results also show that root capacitance was consistently higher in the high vigor and drought resistant 110R than in the moderate vigor and drought sensitive 101-14, highlighting root system differences between the rootstocks. Furthermore, we found that vine water status, indicated by stem water potential and stomatal conductance, varied significantly between rootstocks and locations, and are driven by the underlying soil properties. This research demonstrates the utility of integrating geophysical and electrical methods for field-based phenotyping, providing novel insights into the soil-plant continuum. These findings highlight the potential of agrogeophysics for characterizing vineyard spatial heterogeneity to inform site-specific vineyard management, optimize irrigation strategies, and aid in rootstock selection for enhanced drought resilience without the need for labor intensive excavations.</div></div>","PeriodicalId":48589,"journal":{"name":"Rhizosphere","volume":"37 ","pages":"Article 101247"},"PeriodicalIF":3.5,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145798608","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Rhizosphere microbial recruitment and metabolite-mediated regulation drive contrasting salt tolerance mechanisms in two alfalfa cultivars 根际微生物招募和代谢物介导的调节驱动两个苜蓿品种耐盐机制的对比
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-03-01 Epub Date: 2025-12-01 DOI: 10.1016/j.rhisph.2025.101240
Zhuanqiang Wu , Fenfen Liang , Wen Luo , Qian Zhang , Shaowei Li , Hongshan Yang , Changze Han , Yonggang Wang , Zhiqiang Kong , Xiaoli Wang , Xinqiang Zhu
Alfalfa, the “king of forage,” offers high-quality feed and ecological benefits, but salt stress limits its growth and yield. Salt-tolerant alfalfa varieties were selected using ZT1, developed via space-induced mutation breeding, and ZL2, bred through conventional hybridization. By combining metabolomic and 16S rRNA sequencing data from two varieties (ZT1 and ZL2) under gradient NaCl treatments, we uncovered divergent adaptation mechanisms. ZT1 sustained higher photosynthetic performance, achieved better ion balance, and accumulated more flavonoids and terpenoids. It engaged in quorum sensing and beneficial microbial cooperation, adopting an energy-efficient, microbe-assisted strategy to mitigate stress. In contrast, ZL2 relied on broad metabolic reprogramming and enriched microbes linked to defense, demonstrating a more autonomous, energetically costly survival response under high salinity. Microbial diversity decreased with increasing salt stress, but ZT1 maintained a more stable community structure. These findings advance our understanding of plant–microbe–metabolite crosstalk under stress and support the development of breeding or microbiome-based strategies to enhance salt tolerance in Medicago sativa L.
苜蓿,“草料之王”,提供高质量的饲料和生态效益,但盐胁迫限制了它的生长和产量。利用空间诱变选育的ZT1和常规杂交选育的ZL2选育耐盐苜蓿品种。通过结合两个品种(ZT1和ZL2)在梯度NaCl处理下的代谢组学和16S rRNA测序数据,揭示了不同的适应机制。ZT1维持了更高的光合性能,离子平衡更好,积累了更多的黄酮类化合物和萜类化合物。它参与群体感应和有益微生物的合作,采用一种节能的、微生物辅助的策略来减轻压力。相比之下,ZL2依赖于广泛的代谢重编程和与防御相关的丰富微生物,在高盐度下表现出更自主、更消耗能量的生存反应。微生物多样性随着盐胁迫的增加而下降,但ZT1保持了更稳定的群落结构。这些发现促进了我们对胁迫下植物-微生物-代谢物串扰的理解,并为开发基于育种或微生物组的策略来提高紫花苜蓿的耐盐性提供了支持。
{"title":"Rhizosphere microbial recruitment and metabolite-mediated regulation drive contrasting salt tolerance mechanisms in two alfalfa cultivars","authors":"Zhuanqiang Wu ,&nbsp;Fenfen Liang ,&nbsp;Wen Luo ,&nbsp;Qian Zhang ,&nbsp;Shaowei Li ,&nbsp;Hongshan Yang ,&nbsp;Changze Han ,&nbsp;Yonggang Wang ,&nbsp;Zhiqiang Kong ,&nbsp;Xiaoli Wang ,&nbsp;Xinqiang Zhu","doi":"10.1016/j.rhisph.2025.101240","DOIUrl":"10.1016/j.rhisph.2025.101240","url":null,"abstract":"<div><div>Alfalfa, the “king of forage,” offers high-quality feed and ecological benefits, but salt stress limits its growth and yield. Salt-tolerant alfalfa varieties were selected using ZT1, developed via space-induced mutation breeding, and ZL2, bred through conventional hybridization. By combining metabolomic and 16S rRNA sequencing data from two varieties (ZT1 and ZL2) under gradient NaCl treatments, we uncovered divergent adaptation mechanisms. ZT1 sustained higher photosynthetic performance, achieved better ion balance, and accumulated more flavonoids and terpenoids. It engaged in quorum sensing and beneficial microbial cooperation, adopting an energy-efficient, microbe-assisted strategy to mitigate stress. In contrast, ZL2 relied on broad metabolic reprogramming and enriched microbes linked to defense, demonstrating a more autonomous, energetically costly survival response under high salinity. Microbial diversity decreased with increasing salt stress, but ZT1 maintained a more stable community structure. These findings advance our understanding of plant–microbe–metabolite crosstalk under stress and support the development of breeding or microbiome-based strategies to enhance salt tolerance in <em>Medicago sativa</em> L.</div></div>","PeriodicalId":48589,"journal":{"name":"Rhizosphere","volume":"37 ","pages":"Article 101240"},"PeriodicalIF":3.5,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145798615","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Effects of multi-environmental factors on rhizosphere microbial community structure of Paeonia lactiflora Pall. and its interaction mechanism with medicinal quality 多环境因子对芍药根际微生物群落结构的影响及其与药材质量的相互作用机制
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-03-01 Epub Date: 2025-12-23 DOI: 10.1016/j.rhisph.2025.101252
Feifei Yang , Bingzhen Li , Shuwen Zhao , Yun Hu , Ming Li , Xiaoming Zhang , Yujie Song
Systematic research on factors influencing the quality of Paeonia lactiflora Pall. and the association between rhizosphere microbial communities and medicinal quality remains limited. In this study, the growth quality and rhizosphere microbial diversity of wild and cultivated Paeonia lactiflora Pall. collected from various producing areas in North China were analyzed in relation to soil chemical properties and climatic conditions. Methods such as high-performance liquid chromatography, Mantel tests, and microbial-quality correlation analysis were employed to investigate the effects of cultivation practices on medicinal quality and to identify key environmental factors driving rhizosphere microbial communities. The results demonstrated that growth parameters (e.g., root length and diameter) and bioactive compound contents (e.g., paeoniflorin, oxypaeoniflorin) were significantly higher in wild Paeonia lactiflora Pall. compared to cultivated plants. Production regions and cultivation practices significantly influenced rhizosphere microbial community structure. The microbial diversity in the rhizosphere of wild plants was higher, enriched with growth-promoting bacteria such as Pseudomonas, whereas cultivated plants favored potential pathogenic fungi like Fusarium. Soil chemical characteristics (pH, total nitrogen, available phosphorus), climatic variables (mean annual precipitation, sunshine duration), and producing areas were the primary environmental drivers shaping rhizosphere microbial communities. Bacterial diversity showed a significant positive correlation with root number and ash content of Paeonia lactiflora Pall., while fungal diversity was closely associated with the accumulation of paeoniflorin and total flavonoids. Beneficial microbes, including Reyranella, Xanthobacteraceae, and Streptomyces, exhibited significantly positive correlations with medicinal growth and secondary metabolite accumulation. In conclusion, this study elucidates the “microbe–environment–medicinal quality” interaction mechanism and highlights multi-factorial synergy in determining the medicinal quality of Paeonia lactiflora Pall. These findings provide theoretical support and novel perspectives for the establishment of genuine production areas, sustainable utilization of medicinal plant resources, and improved cultivation management.
芍药品质影响因素的系统研究。根际微生物群落与药材质量之间的关系仍然有限。研究了野生和栽培芍药的生长品质和根际微生物多样性。对华北不同产区的土壤化学性质和气候条件进行了分析。采用高效液相色谱法、Mantel试验和微生物质量相关分析等方法,研究了栽培方式对药材质量的影响,并确定了影响根际微生物群落的关键环境因素。结果表明,野生芍药的生长参数(根长、根径)和活性成分(芍药苷、氧芍药苷)含量显著高于野生芍药;与栽培植物相比。产地和栽培方式对根际微生物群落结构有显著影响。野生植物根际微生物多样性较高,富含促进生长的细菌如假单胞菌,而栽培植物则倾向于潜在的致病真菌如镰刀菌。土壤化学特征(pH、全氮、速效磷)、气候变量(年平均降水量、日照时数)和产地是形成根际微生物群落的主要环境驱动因素。细菌多样性与芍药根数和灰分含量呈极显著正相关。真菌多样性与芍药苷和总黄酮的积累密切相关。有益微生物,包括雷拉菌、黄杆菌科和链霉菌,与药物生长和次生代谢物积累呈显著正相关。综上所述,本研究阐明了“微生物-环境-药用品质”的相互作用机制,强调了影响芍药药用品质的多因子协同作用。这些研究结果为建立药用植物产区、可持续利用药用植物资源和改进栽培管理提供了理论支持和新的视角。
{"title":"Effects of multi-environmental factors on rhizosphere microbial community structure of Paeonia lactiflora Pall. and its interaction mechanism with medicinal quality","authors":"Feifei Yang ,&nbsp;Bingzhen Li ,&nbsp;Shuwen Zhao ,&nbsp;Yun Hu ,&nbsp;Ming Li ,&nbsp;Xiaoming Zhang ,&nbsp;Yujie Song","doi":"10.1016/j.rhisph.2025.101252","DOIUrl":"10.1016/j.rhisph.2025.101252","url":null,"abstract":"<div><div>Systematic research on factors influencing the quality of <em>Paeonia lactiflora</em> Pall. and the association between rhizosphere microbial communities and medicinal quality remains limited. In this study, the growth quality and rhizosphere microbial diversity of wild and cultivated <em>Paeonia lactiflora</em> Pall. collected from various producing areas in North China were analyzed in relation to soil chemical properties and climatic conditions. Methods such as high-performance liquid chromatography, Mantel tests, and microbial-quality correlation analysis were employed to investigate the effects of cultivation practices on medicinal quality and to identify key environmental factors driving rhizosphere microbial communities. The results demonstrated that growth parameters (e.g., root length and diameter) and bioactive compound contents (e.g., paeoniflorin, oxypaeoniflorin) were significantly higher in wild <em>Paeonia lactiflora</em> Pall. compared to cultivated plants. Production regions and cultivation practices significantly influenced rhizosphere microbial community structure. The microbial diversity in the rhizosphere of wild plants was higher, enriched with growth-promoting bacteria such as <em>Pseudomonas</em>, whereas cultivated plants favored potential pathogenic fungi like <em>Fusarium</em>. Soil chemical characteristics (pH, total nitrogen, available phosphorus), climatic variables (mean annual precipitation, sunshine duration), and producing areas were the primary environmental drivers shaping rhizosphere microbial communities. Bacterial diversity showed a significant positive correlation with root number and ash content of <em>Paeonia lactiflora</em> Pall., while fungal diversity was closely associated with the accumulation of paeoniflorin and total flavonoids. Beneficial microbes, including <em>Reyranella</em>, <em>Xanthobacteraceae</em>, and <em>Streptomyces</em>, exhibited significantly positive correlations with medicinal growth and secondary metabolite accumulation. In conclusion, this study elucidates the “microbe–environment–medicinal quality” interaction mechanism and highlights multi-factorial synergy in determining the medicinal quality of <em>Paeonia lactiflora</em> Pall. These findings provide theoretical support and novel perspectives for the establishment of genuine production areas, sustainable utilization of medicinal plant resources, and improved cultivation management.</div></div>","PeriodicalId":48589,"journal":{"name":"Rhizosphere","volume":"37 ","pages":"Article 101252"},"PeriodicalIF":3.5,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145884727","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Enhancing root resilience through sustainable agriculture to mitigate heavy metal pollution and abiotic stresses in a changing climate 通过可持续农业增强根系恢复力,在气候变化中减轻重金属污染和非生物胁迫
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-03-01 Epub Date: 2025-12-24 DOI: 10.1016/j.rhisph.2025.101251
Md Shihab Uddine Khan , Nahid Afridi , Sadia Afroz Ritu , Shamsul Islam Shipar , Samia Binta Zaman , Noshin Tabassum Hasan , Shihab Uddin , Mehedi Hasan , Mehdi Rahimi , Mousumi Jahan Sumi , Shahin Imran
Heavy metal (HM) contamination and climate-induced abiotic stresses have emerged as interconnected global challenges that threaten agricultural productivity and food security. Industrial emissions, agrochemical misuse, and wastewater irrigation contribute to the accumulation of toxic metals such as cadmium, lead, arsenic, and mercury in soils, where they disrupt nutrient cycling and impair plant metabolism. Simultaneously, drought and salinity, exacerbated by climate change, alter soil moisture and ion balance, enhancing metal bioavailability and toxicity. The combined effects of these stresses intensify oxidative damage, inhibit photosynthesis, and reduce crop yield. Plants employ multifaceted defense mechanisms, including activation of antioxidant enzymes, osmolyte accumulation, and regulation of metal transporters, supported by hormonal and transcriptional networks. Recent studies also highlight the role of stress memory and epigenetic regulation in enabling cross-tolerance and long-term adaptation. Sustainable mitigation strategies integrate biological, chemical, and genetic approaches to reduce HM uptake and enhance resilience. Phytoremediation, biochar amendment, and the use of plant growth-promoting rhizobacteria improve soil quality and stress tolerance, while molecular breeding and CRISPR/Cas-based genome editing accelerate the development of dual-resistant crop varieties. This review consolidates current knowledge on the mechanisms underlying HM uptake, toxicity, and plant adaptation under concurrent abiotic stresses, emphasizing the need for integrated, climate-smart, and biotechnological interventions to ensure sustainable crop production and ecosystem restoration in contaminated agroecosystems.
重金属污染和气候引起的非生物胁迫已成为相互关联的全球挑战,威胁着农业生产力和粮食安全。工业排放、农用化学品滥用和废水灌溉导致土壤中镉、铅、砷和汞等有毒金属的积累,破坏养分循环,损害植物代谢。同时,气候变化加剧的干旱和盐碱化改变了土壤水分和离子平衡,提高了金属的生物有效性和毒性。这些胁迫的综合作用加剧了氧化损伤,抑制了光合作用,降低了作物产量。植物采用多方面的防御机制,包括抗氧化酶的激活、渗透物的积累和金属转运体的调节,这些机制由激素和转录网络支持。最近的研究也强调了应激记忆和表观遗传调控在交叉耐受和长期适应中的作用。可持续缓解战略综合了生物、化学和遗传方法,以减少HM吸收并增强复原力。植物修复、生物炭修复和植物促生长根瘤菌的使用提高了土壤质量和抗逆性,而分子育种和基于CRISPR/ cas的基因组编辑加速了双抗作物品种的开发。这篇综述整合了目前关于HM吸收、毒性和植物在非生物胁迫下适应机制的知识,强调需要综合的、气候智能的和生物技术干预措施,以确保受污染农业生态系统的可持续作物生产和生态系统恢复。
{"title":"Enhancing root resilience through sustainable agriculture to mitigate heavy metal pollution and abiotic stresses in a changing climate","authors":"Md Shihab Uddine Khan ,&nbsp;Nahid Afridi ,&nbsp;Sadia Afroz Ritu ,&nbsp;Shamsul Islam Shipar ,&nbsp;Samia Binta Zaman ,&nbsp;Noshin Tabassum Hasan ,&nbsp;Shihab Uddin ,&nbsp;Mehedi Hasan ,&nbsp;Mehdi Rahimi ,&nbsp;Mousumi Jahan Sumi ,&nbsp;Shahin Imran","doi":"10.1016/j.rhisph.2025.101251","DOIUrl":"10.1016/j.rhisph.2025.101251","url":null,"abstract":"<div><div>Heavy metal (HM) contamination and climate-induced abiotic stresses have emerged as interconnected global challenges that threaten agricultural productivity and food security. Industrial emissions, agrochemical misuse, and wastewater irrigation contribute to the accumulation of toxic metals such as cadmium, lead, arsenic, and mercury in soils, where they disrupt nutrient cycling and impair plant metabolism. Simultaneously, drought and salinity, exacerbated by climate change, alter soil moisture and ion balance, enhancing metal bioavailability and toxicity. The combined effects of these stresses intensify oxidative damage, inhibit photosynthesis, and reduce crop yield. Plants employ multifaceted defense mechanisms, including activation of antioxidant enzymes, osmolyte accumulation, and regulation of metal transporters, supported by hormonal and transcriptional networks. Recent studies also highlight the role of stress memory and epigenetic regulation in enabling cross-tolerance and long-term adaptation. Sustainable mitigation strategies integrate biological, chemical, and genetic approaches to reduce HM uptake and enhance resilience. Phytoremediation, biochar amendment, and the use of plant growth-promoting rhizobacteria improve soil quality and stress tolerance, while molecular breeding and CRISPR/Cas-based genome editing accelerate the development of dual-resistant crop varieties. This review consolidates current knowledge on the mechanisms underlying HM uptake, toxicity, and plant adaptation under concurrent abiotic stresses, emphasizing the need for integrated, climate-smart, and biotechnological interventions to ensure sustainable crop production and ecosystem restoration in contaminated agroecosystems.</div></div>","PeriodicalId":48589,"journal":{"name":"Rhizosphere","volume":"37 ","pages":"Article 101251"},"PeriodicalIF":3.5,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145884728","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Rhizosphere
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1