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Long-term nutrient management regimes alter root exudation and rhizosphere fungal community structure in turmeric (Curcuma longa L.) 长期营养管理改变姜黄根系分泌物和根际真菌群落结构
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-06 DOI: 10.1016/j.rhisph.2026.101265
Anitta Abraham , C. Sarathambal , V. Srinivasan , C.K. Thankamani
Nutrient management practices profoundly influence rhizosphere microbial dynamics, which are central to soil fertility and sustainable crop production. However, too little consideration has been given to the taxonomic compositions of rhizosphere soil fungi and their interactions with root exudates under different fertilizer regimes in the turmeric cropping system. Here, we investigated the effects of long-term nutrient management regimes, organic (ONM), integrated (INM) and chemical (CNM) on the fungal community structure in turmeric (Curcuma longa L.), rhizosphere, as well as their relationship with soil properties and root exudation patterns. The results showed that nutrient management regimes clearly separated the fungal communities between the treatments. The ONM treatment supported a higher abundance and diversity of beneficial fungal taxa, including Glomeraceae, whereas INM and CNM were dominated by Psathyrellaceae and Spizellomycetaceae. Organic amendments had a significant effect on root exudate composition, the total abundance of sugars, alcohols, alkaloids and derivatives and amino acids and derivatives were high in ONM and INM treatments. NMDS and Mantel analysis revealed significant correlations of fungal diversity with soil pH, OC, P, Ca, Fe, and Zn, while K showed a negative relationship. Redundancy analysis identified soil pH, P, and root-exuded alcohols and amino acids and derivatives as key determinants of fungal community structure. Collectively, these findings demonstrate that biologically driven organic nutrient inputs enhance rhizosphere fungal diversity and improve soil health. Understanding these relationships provides valuable insights for developing nutrient management strategies that promote robust fungal communities and enable sustainable turmeric production systems through ecologically optimized fertilization practices.
养分管理实践深刻影响根际微生物动态,这是土壤肥力和可持续作物生产的核心。然而,对不同施肥制度下姜黄根际土壤真菌的分类组成及其与根系分泌物的相互作用研究甚少。本文研究了有机(ONM)、综合(INM)和化学(CNM)三种长期营养管理方式对姜黄根际真菌群落结构的影响,以及它们与土壤性质和根系渗出模式的关系。结果表明,不同的营养管理制度明显地分离了不同处理之间的真菌群落。ONM处理的有益真菌类群(包括Glomeraceae)的丰度和多样性更高,而INM和CNM处理的有益真菌类群以Psathyrellaceae和Spizellomycetaceae为主。有机改性对根分泌物组成有显著影响,ONM和INM处理的糖、醇类、生物碱及其衍生物、氨基酸及其衍生物的总丰度较高。NMDS和Mantel分析显示,真菌多样性与土壤pH、OC、P、Ca、Fe和Zn呈显著相关,与K呈负相关。冗余分析表明,土壤pH、磷、根部渗出的醇、氨基酸及其衍生物是真菌群落结构的关键决定因素。总的来说,这些发现表明,生物驱动的有机养分投入可以增强根际真菌多样性,改善土壤健康。了解这些关系为制定营养管理策略提供了有价值的见解,这些策略可以促进强健的真菌群落,并通过生态优化的施肥实践实现可持续的姜黄生产系统。
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引用次数: 0
Adaptive shift to deep soil water use mitigates mining-induced drought stress in Artemisia ordosica 向深层土壤水分利用的适应性转变缓解了油蒿开采引起的干旱胁迫
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-03 DOI: 10.1016/j.rhisph.2026.101259
Xikai Wang , Yunlan He , Suping Peng , Lei Chen
In the ecologically fragile areas of western China, large-scale underground coal mining induces surface subsidence. These disturbances could alter plant water use strategy (WUS). However, the specific transformation path is not well understood. This study focused on Artemisia ordosica Krasch. (Asteraceae), comparing its WUS between subsidence and undisturbed area. By combining natural stable water isotopes (δ2H and δ18O) with deuterium labeling approach, we established a water source tracing pathway from soil to xylem. A Bayesian mixing model (MixSIAR) was applied to evaluate the effect of mining subsidence on plant WUS. The results indicated that: (1) Mining subsidence significantly altered near-surface water cycles, manifesting as depleted stable isotope values in both soil and xylem water in subsidence area (P < 0.05); (2) Artemisia ordosica shifted its WUS in subsidence area, transitioning from primarily using shallow soil water (0–80 cm) in the undisturbed area to increasingly relying on deep soil water (80–120 cm). The proportion of shallow soil water uptake decreased by approximately 10.7 %, while deep soil water uptake increased by about 11.3 %; (3) Deuterium labeling effectively created distinct isotope gradients in soil profile, providing a reliable method for identifying plant water sources. This study demonstrates that Artemisia ordosica adapts to mining-induced environmental changes by actively adjusting its WUS.
在中国西部生态脆弱地区,大规模地下采煤引起地表沉陷。这些干扰可能改变植物的水分利用策略。然而,具体的转换路径还没有被很好地理解。本研究以油蒿(Artemisia ordosica Krasch)为研究对象。(菊科),比较沉降区与未扰动区WUS。通过将天然稳定水同位素(δ2H和δ18O)与氘标记方法相结合,建立了从土壤到木质部的水源追踪途径。采用贝叶斯混合模型(MixSIAR)评价了开采沉陷对矿井WUS的影响。结果表明:(1)开采沉陷显著改变了近地表水循环,表现为塌陷区土壤和木质部水分稳定同位素值的耗损(P <; 0.05);(2)油蒿在塌陷区水分利用能力发生转移,由原状区主要利用浅层土壤水(0 ~ 80 cm)向日益依赖深层土壤水(80 ~ 120 cm)转变。浅层土壤吸水比例下降约10.7 %,深层土壤吸水比例增加约11.3 %;(3)氘标记有效地在土壤剖面中建立了不同的同位素梯度,为植物水源的识别提供了可靠的方法。本研究表明,油蒿通过主动调节WUS来适应采掘引起的环境变化。
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引用次数: 0
Ecological and functional diversity of sulfur-oxidizing and sulfate-reducing bacteria in Chinese mangrove ecosystems: A comparative review with insights from Guangxi Beihai 中国红树林生态系统中硫氧化和硫酸盐还原细菌的生态和功能多样性——以广西北海为例
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-03 DOI: 10.1016/j.rhisph.2026.101260
Muhammad Kashif , Qi Liang , Can Meng , Tingmei Li , Yujia Luo , Feng Guo , Dan Wang , Chengjian Jiang
Mangrove habitats are critical coastal biomes at the land-sea interface, supporting various microbial communities necessary for biogeochemical cycling, including sulfur conversions. The principal players in these systems are sulfur-oxidizing bacteria (SOB) and sulfate-reducing bacteria (SRB), which accordingly control sulfur compounds oxidation and reduction. While SRB lowers sulfate to sulfide during organic material decomposition, SOB oxidizes harmful hydrogen sulfide (H2S) to sulfate (SO42−). Using nutrient cycling, preservation of sulfur balance, and change of redox potential, these microbial interactions help preserve mangrove ecosystems' stability. Aiming toward Guangxi Beihai, Fujian, Guangdong, and Hainan, this review offers a comparative study of SOB and SRB populations in mangrove habitats throughout China. Salinity, organic matter content, redox potential, and anthropogenic influences affect regional microbial diversity and activity. Hainan's high salinity supports SOB, while Guangxi Beihai's prevailing SRB community has moderate salinity and high organic content. Reflecting their several environmental gradients, Fujian and Guangdong have a balanced presence in both groups. The functional roles of SOB and SRB in sulfur cycling, their interactions with carbon and nitrogen dynamics, and their contributions to ecosystem health are emphasized. It further explores the biotechnological potential of these bacteria in wastewater treatment, heavy metals detoxification, and large-scale environmental bioremediation. Notwithstanding developments in microbial ecology, significant knowledge gaps still exist about the adaptation mechanisms of SOB and SRB under environmental stressors, their interactions with other microbial taxa, and their reactions to climate change. Multi-omics techniques, including metagenomics and transcriptomics, should be used in future studies to disentangle sulfur-metabolizing bacteria's functional variety and ecological roles. Developing sustainable conservation plans, reducing anthropogenic effects, and increasing the resilience of mangrove ecosystems against global environmental change depend on an awareness of these microbial processes.
红树林栖息地是海陆界面上重要的沿海生物群落,支持生物地球化学循环(包括硫转化)所必需的各种微生物群落。这些系统中的主要参与者是硫氧化细菌(SOB)和硫酸盐还原细菌(SRB),它们相应地控制硫化合物的氧化和还原。在有机物分解过程中,SRB将硫酸盐分解为硫化物,而SOB将有害的硫化氢(H2S)氧化为硫酸盐(SO42−)。通过养分循环、硫平衡的保持和氧化还原电位的变化,这些微生物相互作用有助于保持红树林生态系统的稳定性。本文以广西、北海、福建、广东和海南为研究对象,对中国红树生境中SOB和SRB种群进行了比较研究。盐度、有机质含量、氧化还原电位和人为影响影响区域微生物多样性和活动。海南的高盐度支持SOB,而广西北海盛行的SRB群落具有中等盐度和高有机质含量。由于福建和广东的环境梯度,这两个群体的存在是平衡的。重点介绍了硫循环过程中SOB和SRB的功能作用、它们与碳氮动态的相互作用以及它们对生态系统健康的贡献。进一步探讨了这些细菌在废水处理、重金属脱毒和大规模环境生物修复方面的生物技术潜力。尽管微生物生态学有了很大的发展,但在环境胁迫下SOB和SRB的适应机制、与其他微生物类群的相互作用以及对气候变化的反应等方面仍存在重大的知识空白。多组学技术,包括宏基因组学和转录组学,应该在未来的研究中使用,以解开硫代谢细菌的功能多样性和生态作用。制定可持续的保护计划,减少人为影响,提高红树林生态系统对全球环境变化的适应能力,取决于对这些微生物过程的认识。
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引用次数: 0
Genomic comparative analysis of Bradyrhizobium elkanii strains: Exploring the diversity of nod factors elkanii慢生根瘤菌的基因组比较分析:探讨nod因子的多样性
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-03 DOI: 10.1016/j.rhisph.2026.101256
Igor Daniel Alves Ribeiro , Anderson José Scherer , Manuel Megías , Francisco J. Ollero , Luciane Maria Pereira Passaglia
Bradyrhizobium elkanii is an important rhizobial species that nodulates a wide range of legumes, including soybean, and is widely used as an inoculant to enhance biological nitrogen fixation. This symbiosis is mediated by chemical signaling between plant flavonoids and bacterial nodulation factors (NFs; lipo-chitooligosaccharides, LCOs), whose structural diversity determines host specificity. In addition, genes related to plant growth–promoting (PGP) traits contribute to efficient root colonization and symbiotic performance.
Here, we performed a comparative genomic analysis of five B. elkanii strains from distinct geographic origins within the SEMIA collection (SEMIA 5011, SEMIA 5026, SEMIA 5027, SEMIA 5019, and SEMIA 587), including two elite inoculant strains, focusing on nodulation gene repertoires and NF profiles. A broader comparison including 56 genomes revealed a open pangenome, characterized by a large accessory fraction enriched in mobilome-related functions, while the core genome was dominated by housekeeping genes.
PGP gene profiles were largely conserved among strains, encompassing functions associated with phytohormone production, stress mitigation, and plant interaction. Nodulation gene repertoires comprised 25–33 genes organized into four to six clusters. A conserved main nod cluster was identified in all five SEMIA strains and was predicted to be plasmid-associated. NF profiling revealed 37 variants composed of three to five N-acetylglucosamine residues and four major types of chemical modifications. Overall, this study provides new insights into the genomic diversity, nodulation gene architecture, and NF variability of B. elkanii, contributing to a better understanding of the molecular basis underlying symbiotic interactions.
elkanii缓生根瘤菌是一种重要的根瘤菌,可结瘤多种豆科植物,包括大豆,并被广泛用作促进生物固氮的接种剂。这种共生关系是通过植物黄酮类化合物和细菌结瘤因子(NFs;脂质-壳寡糖,LCOs)之间的化学信号传导介导的,其结构多样性决定了宿主的特异性。此外,与植物促生长(PGP)性状相关的基因对有效的根定植和共生性能也有影响。在这里,我们对来自SEMIA收集的不同地理来源的5株elkanii菌株(SEMIA 5011, SEMIA 5026, SEMIA 5027, SEMIA 5019和SEMIA 587)进行了比较基因组分析,包括两个精英接种菌株,重点关注结瘤基因库和NF谱。包括56个基因组在内的更广泛的比较揭示了一个开放的泛基因组,其特征是大量附属部分丰富了与移动组相关的功能,而核心基因组主要是内务基因。PGP基因在不同品系中具有保守性,包括与植物激素产生、胁迫缓解和植物相互作用相关的功能。结瘤基因库由25-33个基因组成,分为四到六个簇。在所有5株SEMIA菌株中鉴定出一个保守的主节点簇,并预测与质粒相关。NF谱分析揭示了37个由3到5个n -乙酰氨基葡萄糖残基和4种主要化学修饰组成的变体。总的来说,本研究为贝氏杆菌的基因组多样性、结瘤基因结构和NF变异性提供了新的见解,有助于更好地理解共生相互作用的分子基础。
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引用次数: 0
Divergent colonization strategies shape shared and inoculant-specific transcriptional and microbiome dynamics in pea roots 不同的定植策略塑造了豌豆根中共享的和接种剂特异性的转录和微生物动力学
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-02 DOI: 10.1016/j.rhisph.2025.101255
Ahmad H. Kabir
Beneficial microbes can reprogram plant responses, but how ecologically distinct inoculants differentially shape host responses in pea remain unclear. To address this, we analyzed root transcriptional and microbiome responses to Trichoderma afroharzianum T22 and Bacillus subtilis NRRL B-14596. In RNA-seq analysis, T. afroharzianum induced a balanced set of 221 upregulated and 320 downregulated genes, whereas B. subtilis triggered a substantially broader response with 597 genes upregulated and 138 downregulated. T. afroharzianum established a robust endophytic presence within root tissues and induced a symbiosis-oriented transcriptional program, including CASTOR/POLLUX, lectin-domain receptors, Nodule-specific GRP genes, Sucrose synthase and Glutamine synthetase. This was further supported by co-culture assays, where T. afroharzianum significantly stimulated Rhizobium leguminosarum colony expansion, demonstrating a direct fungal–rhizobial synergism. In contrast, B. subtilis remained primarily epiphytic and triggered a broader, stress- and metabolism-focused transcriptome dominated by Ethylene-responsive transcription factors, AUX/IAA repressors, and metal-buffering and proton-gradient regulators, indicating hormone recalibration and rhizoplane homeostasis rather than Nod-factor signaling. Despite these divergent pathways, both microbes converged on antioxidant and detoxification responses, upregulating multiple antioxidant and glutathione-linked genes. Microbiome profiling further revealed that T. afroharzianum recruited symbiosis-enhancing bacterial and fungal taxa (Rhizobiales, Pararhizobium, Hypocreales), whereas B. subtilis selectively enriched a targeted guild of Gemmatimonadales, Capnodiales, Flavobacterium, Paecilomyces known for nutrient mobilization, auxin buffering, and stress mitigation. Together, these findings demonstrate that endophytic fungi and rhizoplane-associated bacteria reprogram host physiology through distinct yet complementary molecular routes, providing a blueprint for engineering synergistic fungal–bacterial consortia to enhance legume performance.
有益微生物可以重新编程植物的反应,但生态上不同的接种剂如何在豌豆中不同地塑造宿主反应尚不清楚。为了解决这个问题,我们分析了根转录和微生物组对非洲木霉T22和枯草芽孢杆菌NRRL B-14596的反应。在RNA-seq分析中,非洲芽孢杆菌诱导了221个基因上调和320个基因下调,而枯草芽孢杆菌引发了更广泛的反应,有597个基因上调和138个基因下调。稻瘟霉在根组织中建立了强大的内生存在,并诱导了一个以共生为导向的转录程序,包括CASTOR/POLLUX、凝集素结构域受体、结节特异性GRP基因、蔗糖合成酶和谷氨酰胺合成酶。共培养实验进一步支持了这一点,其中非洲芽孢杆菌显著刺激豆科根瘤菌的菌落扩张,证明了真菌-根瘤菌的直接协同作用。相比之下,枯草芽孢杆菌仍然主要是附着性的,并触发了一个更广泛的、以应激和代谢为重点的转录组,该转录组由乙烯应答转录因子、AUX/IAA抑制因子、金属缓冲和质子梯度调节因子主导,表明激素重新校准和根面稳态,而不是nod因子信号。尽管存在这些不同的途径,但这两种微生物在抗氧化和解毒反应上趋同,上调多种抗氧化和谷胱甘肽相关基因。微生物组分析进一步揭示,T. afroharzianum招募了促进共生的细菌和真菌类群(根瘤菌、副根瘤菌、下根瘤菌),而B. subtilis选择性地富集了具有营养动员、生长素缓冲和应激缓解功能的Gemmatimonadales、Capnodiales、Flavobacterium、Paecilomyces等目标类群。总之,这些发现表明内生真菌和根瘤菌相关细菌通过不同但互补的分子途径重新编程宿主生理,为真菌-细菌联合体的工程协同提高豆科植物的性能提供了蓝图。
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引用次数: 0
Enrichment and nitrogen preference of heterotrophic nitrifying bacteria in the maize rhizosphere 玉米根际异养硝化细菌的富集和氮偏好
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-02 DOI: 10.1016/j.rhisph.2026.101257
Mengqiu He , Xiaoqian Dan , Zichun Wang , Zucong Cai , Yi Zhang , Jinbo Zhang , Christoph Müller , Yuanshuo Zhang , Dejin Wang
Heterotrophic nitrification (ONrec) is a crucial pathway of nitrate (NO3) production in acidic soils. While plants are known to stimulate ONrec, the specific microbial agents and their physiological traits remain largely unidentified. Building on our previous 15N tracing study, which quantified the stimulation of ONrec by maize, this research further identified the microbial drivers underpinning this phenomenon. Using plant removal and dark incubation treatments, we linked photosynthetic carbon flow to microbial dynamics. Most probable number (MPN) enumeration revealed significant enrichment of heterotrophic nitrifying bacteria and fungi in the rhizosphere, strongly correlated with soil dissolved organic carbon (DOC). We isolated multiple bacterial genera, including Burkholderia, Stenotrophomonas, Bacillus, Sinomonas, Micromonospora, and Terrabacter. These isolates exhibited remarkable metabolic versatility, oxidizing both organic (maize straw) and inorganic ammonium (NH4+) to NO3. The findings demonstrate that maize plants selectively enrich heterotrophic nitrifiers via root exudates, thereby stimulating ONrec to enhance nitrogen availability.
异养硝化(ONrec)是酸性土壤中产生硝态氮(NO3−)的重要途径。虽然已知植物可以刺激ONrec,但具体的微生物制剂及其生理特性在很大程度上仍未确定。在我们之前的15N示踪研究(量化了玉米对ONrec的刺激)的基础上,本研究进一步确定了支撑这一现象的微生物驱动因素。通过植物去除和暗培养处理,我们将光合碳流与微生物动力学联系起来。最可能数(MPN)计数显示根际异养硝化细菌和真菌显著富集,与土壤溶解有机碳(DOC)密切相关。我们分离了多种细菌属,包括伯克霍尔德氏菌、窄养单胞菌、芽孢杆菌、单胞菌、小单孢菌和Terrabacter。这些菌株表现出显著的代谢多样性,可以将有机(玉米秸秆)和无机铵(NH4+)氧化为NO3−。研究结果表明,玉米植株通过根系分泌物选择性富集异养硝化菌,从而刺激ONrec提高氮素有效性。
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引用次数: 0
Protected cultivation of the stock plant enhances rooting of wounded cuttings of Caryocar brasiliense (Caryocaraceae) 砧木的保护性栽培促进了巴西核桃科(Caryocar brasiliense)受伤插枝的生根
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-12-30 DOI: 10.1016/j.rhisph.2025.101254
Adriene Matos dos Santos , Hellen Cássia Mazzottini-dos-Santos , Leonardo Monteiro Ribeiro , Renan Ribeiro Silva , Nermy Ribeiro Valadares , Paulo Sérgio Nascimento Lopes
Little is known about the factors controlling the efficiency of vegetative propagation by cuttings in tropical woody species. Caryocar brasiliense, an endemic fruit tree of the Cerrado biome, shows great potential for domestication through this technique. This study examined anatomical and physiological aspects related to the effects of the cultivation environment of the stock plants and the timing of wounding at the base of cuttings on the success of propagation. Stock plants were cultivated under full sunlight, shade netting, and greenhouse conditions, while cuttings were wounded at their bases at 0, 7, and 14 days after cutting. Rooting, morphoanatomy, and physiology of both stock plants and cuttings were evaluated, together with the ontogeny of adventitious roots. Greenhouse cultivation promoted greater growth, higher photosynthetic efficiency, and increased carbohydrate concentrations, as well as reduced lignification and phenolic compound accumulation in the cortical region. The phytohormones indole-3-acetic acid and jasmonic acid, together with peroxidase enzyme activity and the ratios of indole-3-acetic acid to 1-aminocyclopropane-1-carboxylic acid, peroxidase, and abscisic acid, showed strong positive correlations with rooting, whereas abscisic acid and zeatin showed negative correlations. Cultivation under 70 % shading and wounding applied seven days after cutting favored adventitious root formation. Adventitious root ontogeny in C. brasiliense is multisite, originating from the vascular cambium, phloem, cortex, and callus, depending on the cutting's origin in relation to the stock plant's cultivation environment. These findings provide insights into optimizing the propagation of C. brasiliense for domestication and conservation purposes.
控制热带木本植物扦插繁殖效率的因素尚不清楚。巴西核桃树是塞拉多生物群系的一种特有果树,通过这种技术显示出巨大的驯化潜力。本研究从解剖学和生理学的角度探讨了砧木栽培环境和插枝基部伤害时间对繁殖成功的影响。砧木在充分日照、遮阳网和温室条件下栽培,扦插在扦插后0、7和14天在砧木基部进行扦插。对砧木和插枝的生根、形态解剖学和生理学进行了评价,并对不定根的发生进行了评价。温室栽培促进了植株的生长,提高了光合效率,增加了碳水化合物浓度,减少了皮质区木质素化和酚类化合物的积累。植物激素吲哚-3-乙酸、茉莉酸、过氧化物酶活性、吲哚-3-乙酸与1-氨基环丙烷-1-羧酸、过氧化物酶、脱落酸与生根呈显著正相关,而脱落酸与玉米素呈显著负相关。70% %遮荫栽培和扦插后7天进行伤害有利于不定根的形成。巴西松不定根的发生是多位点的,可由维管形成层、韧皮部、皮层和愈伤组织形成,这取决于扦插的来源与砧木栽培环境的关系。这些发现为优化巴西螺的繁殖以驯化和保护目的提供了见解。
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引用次数: 0
Enhancing root resilience through sustainable agriculture to mitigate heavy metal pollution and abiotic stresses in a changing climate 通过可持续农业增强根系恢复力,在气候变化中减轻重金属污染和非生物胁迫
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-12-24 DOI: 10.1016/j.rhisph.2025.101251
Md Shihab Uddine Khan , Nahid Afridi , Sadia Afroz Ritu , Shamsul Islam Shipar , Samia Binta Zaman , Noshin Tabassum Hasan , Shihab Uddin , Mehedi Hasan , Mehdi Rahimi , Mousumi Jahan Sumi , Shahin Imran
Heavy metal (HM) contamination and climate-induced abiotic stresses have emerged as interconnected global challenges that threaten agricultural productivity and food security. Industrial emissions, agrochemical misuse, and wastewater irrigation contribute to the accumulation of toxic metals such as cadmium, lead, arsenic, and mercury in soils, where they disrupt nutrient cycling and impair plant metabolism. Simultaneously, drought and salinity, exacerbated by climate change, alter soil moisture and ion balance, enhancing metal bioavailability and toxicity. The combined effects of these stresses intensify oxidative damage, inhibit photosynthesis, and reduce crop yield. Plants employ multifaceted defense mechanisms, including activation of antioxidant enzymes, osmolyte accumulation, and regulation of metal transporters, supported by hormonal and transcriptional networks. Recent studies also highlight the role of stress memory and epigenetic regulation in enabling cross-tolerance and long-term adaptation. Sustainable mitigation strategies integrate biological, chemical, and genetic approaches to reduce HM uptake and enhance resilience. Phytoremediation, biochar amendment, and the use of plant growth-promoting rhizobacteria improve soil quality and stress tolerance, while molecular breeding and CRISPR/Cas-based genome editing accelerate the development of dual-resistant crop varieties. This review consolidates current knowledge on the mechanisms underlying HM uptake, toxicity, and plant adaptation under concurrent abiotic stresses, emphasizing the need for integrated, climate-smart, and biotechnological interventions to ensure sustainable crop production and ecosystem restoration in contaminated agroecosystems.
重金属污染和气候引起的非生物胁迫已成为相互关联的全球挑战,威胁着农业生产力和粮食安全。工业排放、农用化学品滥用和废水灌溉导致土壤中镉、铅、砷和汞等有毒金属的积累,破坏养分循环,损害植物代谢。同时,气候变化加剧的干旱和盐碱化改变了土壤水分和离子平衡,提高了金属的生物有效性和毒性。这些胁迫的综合作用加剧了氧化损伤,抑制了光合作用,降低了作物产量。植物采用多方面的防御机制,包括抗氧化酶的激活、渗透物的积累和金属转运体的调节,这些机制由激素和转录网络支持。最近的研究也强调了应激记忆和表观遗传调控在交叉耐受和长期适应中的作用。可持续缓解战略综合了生物、化学和遗传方法,以减少HM吸收并增强复原力。植物修复、生物炭修复和植物促生长根瘤菌的使用提高了土壤质量和抗逆性,而分子育种和基于CRISPR/ cas的基因组编辑加速了双抗作物品种的开发。这篇综述整合了目前关于HM吸收、毒性和植物在非生物胁迫下适应机制的知识,强调需要综合的、气候智能的和生物技术干预措施,以确保受污染农业生态系统的可持续作物生产和生态系统恢复。
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引用次数: 0
Effects of multi-environmental factors on rhizosphere microbial community structure of Paeonia lactiflora Pall. and its interaction mechanism with medicinal quality 多环境因子对芍药根际微生物群落结构的影响及其与药材质量的相互作用机制
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-12-23 DOI: 10.1016/j.rhisph.2025.101252
Feifei Yang , Bingzhen Li , Shuwen Zhao , Yun Hu , Ming Li , Xiaoming Zhang , Yujie Song
Systematic research on factors influencing the quality of Paeonia lactiflora Pall. and the association between rhizosphere microbial communities and medicinal quality remains limited. In this study, the growth quality and rhizosphere microbial diversity of wild and cultivated Paeonia lactiflora Pall. collected from various producing areas in North China were analyzed in relation to soil chemical properties and climatic conditions. Methods such as high-performance liquid chromatography, Mantel tests, and microbial-quality correlation analysis were employed to investigate the effects of cultivation practices on medicinal quality and to identify key environmental factors driving rhizosphere microbial communities. The results demonstrated that growth parameters (e.g., root length and diameter) and bioactive compound contents (e.g., paeoniflorin, oxypaeoniflorin) were significantly higher in wild Paeonia lactiflora Pall. compared to cultivated plants. Production regions and cultivation practices significantly influenced rhizosphere microbial community structure. The microbial diversity in the rhizosphere of wild plants was higher, enriched with growth-promoting bacteria such as Pseudomonas, whereas cultivated plants favored potential pathogenic fungi like Fusarium. Soil chemical characteristics (pH, total nitrogen, available phosphorus), climatic variables (mean annual precipitation, sunshine duration), and producing areas were the primary environmental drivers shaping rhizosphere microbial communities. Bacterial diversity showed a significant positive correlation with root number and ash content of Paeonia lactiflora Pall., while fungal diversity was closely associated with the accumulation of paeoniflorin and total flavonoids. Beneficial microbes, including Reyranella, Xanthobacteraceae, and Streptomyces, exhibited significantly positive correlations with medicinal growth and secondary metabolite accumulation. In conclusion, this study elucidates the “microbe–environment–medicinal quality” interaction mechanism and highlights multi-factorial synergy in determining the medicinal quality of Paeonia lactiflora Pall. These findings provide theoretical support and novel perspectives for the establishment of genuine production areas, sustainable utilization of medicinal plant resources, and improved cultivation management.
芍药品质影响因素的系统研究。根际微生物群落与药材质量之间的关系仍然有限。研究了野生和栽培芍药的生长品质和根际微生物多样性。对华北不同产区的土壤化学性质和气候条件进行了分析。采用高效液相色谱法、Mantel试验和微生物质量相关分析等方法,研究了栽培方式对药材质量的影响,并确定了影响根际微生物群落的关键环境因素。结果表明,野生芍药的生长参数(根长、根径)和活性成分(芍药苷、氧芍药苷)含量显著高于野生芍药;与栽培植物相比。产地和栽培方式对根际微生物群落结构有显著影响。野生植物根际微生物多样性较高,富含促进生长的细菌如假单胞菌,而栽培植物则倾向于潜在的致病真菌如镰刀菌。土壤化学特征(pH、全氮、速效磷)、气候变量(年平均降水量、日照时数)和产地是形成根际微生物群落的主要环境驱动因素。细菌多样性与芍药根数和灰分含量呈极显著正相关。真菌多样性与芍药苷和总黄酮的积累密切相关。有益微生物,包括雷拉菌、黄杆菌科和链霉菌,与药物生长和次生代谢物积累呈显著正相关。综上所述,本研究阐明了“微生物-环境-药用品质”的相互作用机制,强调了影响芍药药用品质的多因子协同作用。这些研究结果为建立药用植物产区、可持续利用药用植物资源和改进栽培管理提供了理论支持和新的视角。
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引用次数: 0
Arbuscular mycorrhizal symbiosis Drives rhizosphere-regulated drought tolerance in maize 丛枝菌根共生驱动玉米根际调控的抗旱性
IF 3.5 3区 生物学 Q1 PLANT SCIENCES Pub Date : 2025-12-22 DOI: 10.1016/j.rhisph.2025.101250
Ghulam Murtaza , Muhammad Usman , Khairiah Mubarak Alwutayd , Rashid Iqbal
Drought-induced stress is a significant constraint for crop yields in semi-arid and arid areas.
Yield assessments under water stress indicate that mycorrhizae can alleviate the detrimental impacts of drought, placing them as sustainable options for agricultural practices in affected areas. Thus, we executed a two-year study to examine the effects of root colonization by two AMF species (Diversispora epigaea and Diversispora versiformis) under different drought stress conditions, assessing maize morpho-physiological and biochemical characteristics, nutrient absorption, yield components, oil percentage, and irrigation water efficiency. The research was conducted in a desolate region of Pakistan during the 2023 and 2024 growing seasons. Drought-induced stress was generated at two levels by irrigating after 80 % and 60 % water loss, categorized as severe and mild drought stress. Irrigation after a 40 % reduction in water was considered normal (without stress). The findings demonstrated that regardless of AMF species and level of drought stress, inoculated plants yielded heavier seeds, higher dry matter, chlorophyll (37 %) and carotenoids (41 %), phytohormone (27 %), enhanced oil yields (32 %) and seeds (24.2 %) compared to uninoculated plants. Notably, the maize seed yields of Diversispora epigaea-treated plants under every irrigation treatment surpassed those of Diversispora versiformis inoculated plants and uninoculated plants. Drought stress reduced nitrogen levels in seeds and leaves, whereas AMF enhanced nitrogen levels, particularly when crops were treated with Diversispora epigaea. Moreover, seed phosphorus percentages were not influenced by AMF in 2023. Conversely, the highest phosphorus percentages in seeds and leaves were recorded in crops inoculated with Diversispora epigaea in 2023. Our findings indicate that Diversispora epigaea exhibits greater efficiency under water stress and provides superior support to maize plants.
干旱胁迫是半干旱和干旱地区作物产量的重要制约因素。水分胁迫下的产量评估表明,菌根可以减轻干旱的有害影响,使其成为受影响地区农业实践的可持续选择。因此,我们进行了一项为期两年的研究,研究了两种AMF物种(diverspora epigaea和diverspora versiformis)在不同干旱胁迫条件下对根系定殖的影响,评估了玉米的形态生理生化特征、养分吸收、产量组成、含油量和灌溉用水效率。这项研究是在2023年和2024年的生长季节在巴基斯坦的一个荒凉地区进行的。水分损失率分别为80% %和60% %,分别为重度和轻度干旱胁迫。水减少40% %后的灌溉被认为是正常的(没有压力)。结果表明,无论AMF种类和干旱胁迫水平如何,与未接种植株相比,接种植株的种子更重,干物质、叶绿素(37 %)、类胡萝卜素(41 %)、植物激素(27 %)更高,油产量(32 %)和种子(24.2% %)也更高。值得注意的是,各灌溉处理下,长角孢虫处理植株的玉米种子产量均高于异角孢虫接种植株和未接种植株。干旱胁迫降低了种子和叶片中的氮含量,而AMF则提高了氮含量,特别是当作物被异孢菌处理时。此外,2023年AMF对种子磷含量没有影响。相反,在2023年接种了异孢菌的作物的种子和叶片中磷含量最高。研究结果表明,在水分胁迫下,异孢菌(diverspora epigaea)表现出更高的效率,为玉米植株提供了更好的支持。
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