In this paper, we propose a model to assess the impacts of budget allocation for vaccination and awareness programs on the dynamics of infectious diseases. The budget allocation is assumed to follow logistic growth, and its per capita growth rate increases proportional to disease prevalence. An increment in per-capita growth rate of budget allocation due to increase in infected individuals after a threshold value leads to onset of limit cycle oscillations. Our results reveal that the epidemic potential can be reduced or even disease can be eradicated through vaccination of high quality and/or continuous propagation of awareness among the people in endemic zones. We extend the proposed model by incorporating a discrete time delay in the increment of budget allocation due to infected population in the region. We observe that multiple stability switches occur and the system becomes chaotic on gradual increase in the value of time delay.
{"title":"Delay in budget allocation for vaccination and awareness induces chaos in an infectious disease model.","authors":"Arvind Kumar Misra, Rajanish Kumar Rai, Pankaj Kumar Tiwari, Maia Martcheva","doi":"10.1080/17513758.2021.1952322","DOIUrl":"https://doi.org/10.1080/17513758.2021.1952322","url":null,"abstract":"<p><p>In this paper, we propose a model to assess the impacts of budget allocation for vaccination and awareness programs on the dynamics of infectious diseases. The budget allocation is assumed to follow logistic growth, and its per capita growth rate increases proportional to disease prevalence. An increment in per-capita growth rate of budget allocation due to increase in infected individuals after a threshold value leads to onset of limit cycle oscillations. Our results reveal that the epidemic potential can be reduced or even disease can be eradicated through vaccination of high quality and/or continuous propagation of awareness among the people in endemic zones. We extend the proposed model by incorporating a discrete time delay in the increment of budget allocation due to infected population in the region. We observe that multiple stability switches occur and the system becomes chaotic on gradual increase in the value of time delay.</p>","PeriodicalId":48809,"journal":{"name":"Journal of Biological Dynamics","volume":"15 1","pages":"395-429"},"PeriodicalIF":2.8,"publicationDate":"2021-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/17513758.2021.1952322","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39182801","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2021-12-01DOI: 10.1080/17513758.2021.1946177
Maia Martcheva, Necibe Tuncer, Calistus N Ngonghala
We propose two models inspired by the COVID-19 pandemic: a coupled disease-human behaviour (or disease-game theoretic), and a coupled disease-human behaviour-economic model, both of which account for the impact of social-distancing on disease control and economic growth. The models exhibit rich dynamical behaviour including multistable equilibria, a backward bifurcation, and sustained bounded periodic oscillations. Analyses of the first model suggests that the disease can be eliminated if everybody practices full social-distancing, but the most likely outcome is some level of disease coupled with some level of social-distancing. The same outcome is observed with the second model when the economy is weaker than the social norms to follow health directives. However, if the economy is stronger, it can support some level of social-distancing that can lead to disease elimination.
{"title":"Effects of social-distancing on infectious disease dynamics: an evolutionary game theory and economic perspective.","authors":"Maia Martcheva, Necibe Tuncer, Calistus N Ngonghala","doi":"10.1080/17513758.2021.1946177","DOIUrl":"https://doi.org/10.1080/17513758.2021.1946177","url":null,"abstract":"<p><p>We propose two models inspired by the COVID-19 pandemic: a coupled disease-human behaviour (or disease-game theoretic), and a coupled disease-human behaviour-economic model, both of which account for the impact of social-distancing on disease control and economic growth. The models exhibit rich dynamical behaviour including multistable equilibria, a backward bifurcation, and sustained bounded periodic oscillations. Analyses of the first model suggests that the disease can be eliminated if everybody practices full social-distancing, but the most likely outcome is some level of disease coupled with some level of social-distancing. The same outcome is observed with the second model when the economy is weaker than the social norms to follow health directives. However, if the economy is stronger, it can support some level of social-distancing that can lead to disease elimination.</p>","PeriodicalId":48809,"journal":{"name":"Journal of Biological Dynamics","volume":"15 1","pages":"342-366"},"PeriodicalIF":2.8,"publicationDate":"2021-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/17513758.2021.1946177","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39114566","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
In this paper, we investigate the combined effects of fear, prey refuge and additional food for predator in a predator-prey system with Beddington type functional response. We observe oscillatory behaviour of the system in the absence of fear, refuge and additional food whereas the system shows stable dynamics if anyone of these three factors is introduced. After analysing the behaviour of system with fear, refuge and additional food, we find that the system destabilizes due to fear factor whereas refuge and additional food stabilize the system by killing persistent oscillations. We extend our model by considering the fact that after sensing the chemical/vocal cue, prey takes some time for assessing the predation risk. The delayed system shows chaotic dynamics through multiple stability switches for increasing values of time delay. Moreover, we see the impact of seasonal change in the level of fear on the delayed as well as non-delayed system.
{"title":"A delay non-autonomous model for the combined effects of fear, prey refuge and additional food for predator.","authors":"Nazmul Sk, Pankaj Kumar Tiwari, Samares Pal, Maia Martcheva","doi":"10.1080/17513758.2021.2001583","DOIUrl":"https://doi.org/10.1080/17513758.2021.2001583","url":null,"abstract":"<p><p>In this paper, we investigate the combined effects of fear, prey refuge and additional food for predator in a predator-prey system with Beddington type functional response. We observe oscillatory behaviour of the system in the absence of fear, refuge and additional food whereas the system shows stable dynamics if anyone of these three factors is introduced. After analysing the behaviour of system with fear, refuge and additional food, we find that the system destabilizes due to fear factor whereas refuge and additional food stabilize the system by killing persistent oscillations. We extend our model by considering the fact that after sensing the chemical/vocal cue, prey takes some time for assessing the predation risk. The delayed system shows chaotic dynamics through multiple stability switches for increasing values of time delay. Moreover, we see the impact of seasonal change in the level of fear on the delayed as well as non-delayed system.</p>","PeriodicalId":48809,"journal":{"name":"Journal of Biological Dynamics","volume":"15 1","pages":"580-622"},"PeriodicalIF":2.8,"publicationDate":"2021-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39899392","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2021-12-01DOI: 10.1080/17513758.2020.1864038
Peter Rashkov, Bob W Kooi
We introduce a compartmental host-vector model for dengue with two viral strains, temporary cross-immunity for the hosts, and possible secondary infections. We study the conditions on existence of endemic equilibria where one strain displaces the other or the two virus strains co-exist. Since the host and vector epidemiology follow different time scales, the model is described as a slow-fast system. We use the geometric singular perturbation technique to reduce the model dimension. We compare the behaviour of the full model with that of the model with a quasi-steady approximation for the vector dynamics. We also perform numerical bifurcation analysis with parameter values from the literature and compare the bifurcation structure to that of previous two-strain host-only models.
{"title":"Complexity of host-vector dynamics in a two-strain dengue model.","authors":"Peter Rashkov, Bob W Kooi","doi":"10.1080/17513758.2020.1864038","DOIUrl":"https://doi.org/10.1080/17513758.2020.1864038","url":null,"abstract":"<p><p>We introduce a compartmental host-vector model for dengue with two viral strains, temporary cross-immunity for the hosts, and possible secondary infections. We study the conditions on existence of endemic equilibria where one strain displaces the other or the two virus strains co-exist. Since the host and vector epidemiology follow different time scales, the model is described as a slow-fast system. We use the geometric singular perturbation technique to reduce the model dimension. We compare the behaviour of the full model with that of the model with a quasi-steady approximation for the vector dynamics. We also perform numerical bifurcation analysis with parameter values from the literature and compare the bifurcation structure to that of previous two-strain host-only models.</p>","PeriodicalId":48809,"journal":{"name":"Journal of Biological Dynamics","volume":"15 1","pages":"35-72"},"PeriodicalIF":2.8,"publicationDate":"2021-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/17513758.2020.1864038","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38746374","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2021-12-01DOI: 10.1080/17513758.2021.2001584
Milan Batista
This note provides an elementary derivation of the basic reproduction number and the effective reproduction number from the discrete Kermack-McKendrick epidemic model. The derived formulae match those derived from the continuous version of the model; however, the derivation from discrete model is a bit more intuitive. The MATLAB functions for its calculation are given. A real case example is considered and the results are compared with those obtained by the R0 and the EpiEstim software packages.
{"title":"On the reproduction number in epidemics.","authors":"Milan Batista","doi":"10.1080/17513758.2021.2001584","DOIUrl":"https://doi.org/10.1080/17513758.2021.2001584","url":null,"abstract":"<p><p>This note provides an elementary derivation of the basic reproduction number and the effective reproduction number from the discrete Kermack-McKendrick epidemic model. The derived formulae match those derived from the continuous version of the model; however, the derivation from discrete model is a bit more intuitive. The MATLAB functions for its calculation are given. A real case example is considered and the results are compared with those obtained by the R0 and the EpiEstim software packages.</p>","PeriodicalId":48809,"journal":{"name":"Journal of Biological Dynamics","volume":"15 1","pages":"623-634"},"PeriodicalIF":2.8,"publicationDate":"2021-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39642207","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2021-12-01DOI: 10.1080/17513758.2021.1914757
Pengcheng Du, Yunhua Liao
It is widely recognized that the criminal act of poaching has brought tremendous damage to biodiversity. This paper employs a stochastic single-species model with regime switching to investigate the impact of poaching. We first carry out the survival analysis and obtain sufficient conditions for the extinction and persistence in mean of the single-species population. Then, we show that the model is positive recurrent by constructing suitable Lyapunov function. Finally, numerical simulations are carried out to support our theoretical results. It is found that: (i) As the intensity of poaching increases, the odds of being at risk of extinction increases for the single-species population. (ii) The regime switching can suppress the extinction of the single-species population. (iii) The white noise is detrimental to the survival of the single-species population. (iv) Increasing the criminal cost of poaching and establishing animal sanctuaries are important ways to protect biodiversity.
{"title":"The impact of poaching and regime switching on the dynamics of single-species model.","authors":"Pengcheng Du, Yunhua Liao","doi":"10.1080/17513758.2021.1914757","DOIUrl":"https://doi.org/10.1080/17513758.2021.1914757","url":null,"abstract":"<p><p>It is widely recognized that the criminal act of poaching has brought tremendous damage to biodiversity. This paper employs a stochastic single-species model with regime switching to investigate the impact of poaching. We first carry out the survival analysis and obtain sufficient conditions for the extinction and persistence in mean of the single-species population. Then, we show that the model is positive recurrent by constructing suitable Lyapunov function. Finally, numerical simulations are carried out to support our theoretical results. It is found that: (i) As the intensity of poaching increases, the odds of being at risk of extinction increases for the single-species population. (ii) The regime switching can suppress the extinction of the single-species population. (iii) The white noise is detrimental to the survival of the single-species population. (iv) Increasing the criminal cost of poaching and establishing animal sanctuaries are important ways to protect biodiversity.</p>","PeriodicalId":48809,"journal":{"name":"Journal of Biological Dynamics","volume":"15 1","pages":"250-268"},"PeriodicalIF":2.8,"publicationDate":"2021-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/17513758.2021.1914757","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38881059","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2021-12-01DOI: 10.1080/17513758.2020.1867246
Xiaochun Cao, Zhen Jin, Guirong Liu, Michael Y Li
Basic reproduction number in network epidemic dynamics is studied in the case of stochastic regime-switching networks. For generality, the dependence between successive networks is considered to follow a continuous time semi-Markov chain. is the weighted average of the basic reproduction numbers of deterministic subnetworks. Its position with respect to 1 can determine epidemic persistence or extinction in theories and simulations.
{"title":"On the basic reproduction number in semi-Markov switching networks.","authors":"Xiaochun Cao, Zhen Jin, Guirong Liu, Michael Y Li","doi":"10.1080/17513758.2020.1867246","DOIUrl":"https://doi.org/10.1080/17513758.2020.1867246","url":null,"abstract":"<p><p>Basic reproduction number <math><msub><mrow><mi>R</mi></mrow><mn>0</mn></msub></math> in network epidemic dynamics is studied in the case of stochastic regime-switching networks. For generality, the dependence between successive networks is considered to follow a continuous time semi-Markov chain. <math><msub><mrow><mi>R</mi></mrow><mn>0</mn></msub></math> is the weighted average of the basic reproduction numbers of deterministic subnetworks. Its position with respect to 1 can determine epidemic persistence or extinction in theories and simulations.</p>","PeriodicalId":48809,"journal":{"name":"Journal of Biological Dynamics","volume":"15 1","pages":"73-85"},"PeriodicalIF":2.8,"publicationDate":"2021-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/17513758.2020.1867246","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38784700","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2021-12-01DOI: 10.1080/17513758.2021.1919322
Kyeongah Nah, Jianhong Wu
Co-feeding is a mode of pathogen transmission for a wide range of tick-borne diseases where susceptible ticks can acquire infection from co-feeding with infected ticks on the same hosts. The significance of this transmission pathway is determined by the co-occurrence of ticks at different stages in the same season. Taking this into account, we formulate a system of differential equations with tick population dynamics and pathogen transmission dynamics highly regulated by the seasonal temperature variations. We examine the global dynamics of the model systems, and show that the two important ecological and epidemiological basic reproduction numbers can be used to fully characterize the long-term dynamics, and we link these two important threshold values to efficacy of co-feeding transmission.
{"title":"Long-term transmission dynamics of tick-borne diseases involving seasonal variation and co-feeding transmission.","authors":"Kyeongah Nah, Jianhong Wu","doi":"10.1080/17513758.2021.1919322","DOIUrl":"https://doi.org/10.1080/17513758.2021.1919322","url":null,"abstract":"<p><p>Co-feeding is a mode of pathogen transmission for a wide range of tick-borne diseases where susceptible ticks can acquire infection from co-feeding with infected ticks on the same hosts. The significance of this transmission pathway is determined by the co-occurrence of ticks at different stages in the same season. Taking this into account, we formulate a system of differential equations with tick population dynamics and pathogen transmission dynamics highly regulated by the seasonal temperature variations. We examine the global dynamics of the model systems, and show that the two important ecological and epidemiological basic reproduction numbers can be used to fully characterize the long-term dynamics, and we link these two important threshold values to efficacy of co-feeding transmission.</p>","PeriodicalId":48809,"journal":{"name":"Journal of Biological Dynamics","volume":"15 1","pages":"269-286"},"PeriodicalIF":2.8,"publicationDate":"2021-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/17513758.2021.1919322","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"38846386","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2021-12-01DOI: 10.1080/17513758.2021.1925753
Xiaowen Xiong, Yanqiu Li, Dongmei Zheng
The dynamic mechanism of a whole-cell model containing electrical signalling and two-compartment Ca signalling in gonadotrophs is investigated. The transition from spiking to bursting by Hopf bifurcation of the fast subsystem about the slow variable is detected via the suitable parameters. When the timescale of K gating variable is changed, the relaxation oscillation with locally small fluctuation, chaotic bursting and mixed-mode bursting (MMB) are revealed through chaos. In addition, the bifurcation of with regard to is analysed, showing periodic solutions, torus, period doubling solutions and chaos. Finally, hyperpolarizations and torus canard-like behaviours of the full system under a set of specific parameters are elucidated.
{"title":"Dynamic mechanism of multiple bursting patterns in a whole-cell multiscale model with calcium oscillations.","authors":"Xiaowen Xiong, Yanqiu Li, Dongmei Zheng","doi":"10.1080/17513758.2021.1925753","DOIUrl":"https://doi.org/10.1080/17513758.2021.1925753","url":null,"abstract":"<p><p>The dynamic mechanism of a whole-cell model containing electrical signalling and two-compartment Ca<math><msup><mi></mi><mrow><mn>2</mn><mo>+</mo></mrow></msup></math> signalling in gonadotrophs is investigated. The transition from spiking to bursting by Hopf bifurcation of the fast subsystem about the slow variable is detected via the suitable parameters. When the timescale of K<math><msup><mi></mi><mo>+</mo></msup></math> gating variable is changed, the relaxation oscillation with locally small fluctuation, chaotic bursting and mixed-mode bursting (MMB) are revealed through chaos. In addition, the bifurcation of <math><mo>[</mo><msup><mrow><mi>C</mi><mi>a</mi></mrow><mrow><mn>2</mn><mo>+</mo></mrow></msup><msub><mo>]</mo><mi>i</mi></msub></math> with regard to <math><mo>[</mo><mi>I</mi><msub><mi>P</mi><mn>3</mn></msub><mo>]</mo></math> is analysed, showing periodic solutions, torus, period doubling solutions and chaos. Finally, hyperpolarizations and torus canard-like behaviours of the full system under a set of specific parameters are elucidated.</p>","PeriodicalId":48809,"journal":{"name":"Journal of Biological Dynamics","volume":"15 1","pages":"308-326"},"PeriodicalIF":2.8,"publicationDate":"2021-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1080/17513758.2021.1925753","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39065793","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2021-12-01DOI: 10.1080/17513758.2021.1991497
Eric Che, Abdul-Aziz Yakubu
In a recent paper, Che et al. [5] used a continuous-time Ordinary Differential Equation (ODE) model with risk structure to study cholera infections in Cameroon. However, the population and the reported cholera cases in Cameroon are censored at discrete-time annual intervals. In this paper, unlike in [5], we introduce a discrete-time risk-structured cholera model with no spatial structure. We use our discrete-time demographic equation to 'fit' the annual population of Cameroon. Furthermore, we use our fitted discrete-time model to capture the annually reported cholera cases from 1987 to 2004 and to study the impact of vaccination, treatment and improved sanitation on the number of cholera infections from 2004 to 2019. Our discrete-time cholera model confirms the results of the ODE model in [5]. However, our discrete-time model predicts a decrease in the number of cholera cases in a shorter period of cholera intervention (2004-2019) as compared to the ODE model's period of intervention (2004-2022).
{"title":"A discrete-time risk-structured model of cholera infections in Cameroon.","authors":"Eric Che, Abdul-Aziz Yakubu","doi":"10.1080/17513758.2021.1991497","DOIUrl":"https://doi.org/10.1080/17513758.2021.1991497","url":null,"abstract":"<p><p>In a recent paper, Che et al. [5] used a continuous-time Ordinary Differential Equation (ODE) model with risk structure to study cholera infections in Cameroon. However, the population and the reported cholera cases in Cameroon are censored at discrete-time annual intervals. In this paper, unlike in [5], we introduce a discrete-time risk-structured cholera model with no spatial structure. We use our discrete-time demographic equation to 'fit' the annual population of Cameroon. Furthermore, we use our fitted discrete-time model to capture the annually reported cholera cases from 1987 to 2004 and to study the impact of vaccination, treatment and improved sanitation on the number of cholera infections from 2004 to 2019. Our discrete-time cholera model confirms the results of the ODE model in [5]. However, our discrete-time model predicts a decrease in the number of cholera cases in a shorter period of cholera intervention (2004-2019) as compared to the ODE model's period of intervention (2004-2022).</p>","PeriodicalId":48809,"journal":{"name":"Journal of Biological Dynamics","volume":"15 1","pages":"523-562"},"PeriodicalIF":2.8,"publicationDate":"2021-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"39536186","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}