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SARS-CoV-2 and self-medication in Cameroon: a mathematical model. 喀麦隆的SARS-CoV-2和自我用药:一个数学模型。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.1883130
Jude D Kong, Rinel F Tchuendom, Samuel A Adeleye, Jummy F David, Fikreab Solomon Admasu, Emmanuel A Bakare, Nourridine Siewe

Self-medication is an important initial response to illness in Africa. This mode of medication is often done with the help of African traditional medicines. Because of the misconception that African traditional medicines can cure/prevent all diseases, some Africans may opt for COVID-19 prevention and management by self-medicating. Thus to efficiently predict the dynamics of COVID-19 in Africa, the role of the self-medicated population needs to be taken into account. In this paper, we formulate and analyse a mathematical model for the dynamics of COVID-19 in Cameroon. The model is represented by a system of compartmental age-structured ODEs that takes into account the self-medicated population and subdivides the human population into two age classes relative to their current immune system strength. We use our model to propose policy measures that could be implemented in the course of an epidemic in order to better handle cases of self-medication.

在非洲,自我药疗是对疾病的重要初步反应。这种治疗方式通常是在非洲传统药物的帮助下完成的。由于误解非洲传统药物可以治愈/预防所有疾病,一些非洲人可能会选择通过自我治疗来预防和管理COVID-19。因此,为了有效预测2019冠状病毒病在非洲的动态,需要考虑自我用药人群的作用。在本文中,我们制定并分析了喀麦隆COVID-19动态的数学模型。该模型由间隔年龄结构的ode系统表示,该系统考虑了自我用药人群,并将人群细分为相对于其当前免疫系统强度的两个年龄段。我们利用我们的模型提出在疫情期间可以实施的政策措施,以便更好地处理自我药疗的情况。
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引用次数: 9
Threshold dynamics of a HCV model with virus to cell transmission in both liver with CTL immune response and the extrahepatic tissue. 具有CTL免疫应答的肝脏和肝外组织中病毒向细胞传播的HCV模型的阈值动力学
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2020.1859632
Xinli Hu, Jianquan Li, Xiaomei Feng

In this paper, a deterministic model characterizing the within-host infection of Hepatitis C virus (HCV) in intrahepatic and extrahepatic tissues is presented. In addition, the model also includes the effect of the cytotoxic T lymphocyte (CTL) immunity described by a linear activation rate by infected cells. Firstly, the non-negativity and boundedness of solutions of the model are established. Secondly, the basic reproduction number R01 and immune reproduction number R02 are calculated, respectively. Three equilibria, namely, infection-free, CTL immune response-free and infected equilibrium with CTL immune response are discussed in terms of these two thresholds. Thirdly, the stability of these three equilibria is investigated theoretically as well as numerically. The results show that when R01<1 , the virus will be cleared out eventually and the CTL immune response will also disappear; when R02<1<R01 , the virus persists within the host, but the CTL immune response disappears eventually; when R02>1 , both of the virus and the CTL immune response persist within the host. Finally, a brief discussion will be given.

本文提出了一种表征丙型肝炎病毒(HCV)在肝内和肝外组织中宿主内感染的确定性模型。此外,该模型还包括受感染细胞线性激活率描述的细胞毒性T淋巴细胞(CTL)免疫的影响。首先,建立了模型解的非负性和有界性。其次,分别计算基本繁殖数R01和免疫繁殖数R02。根据这两个阈值讨论了无感染平衡、无CTL免疫反应平衡和有CTL免疫反应的感染平衡。第三,对这三种平衡的稳定性进行了理论和数值研究。结果表明,当R011发生时,病毒最终被清除,CTL免疫应答也随之消失;当R021R01时,病毒在宿主体内持续存在,但CTL免疫应答最终消失;当R02>1时,病毒和CTL免疫反应都在宿主体内持续存在。最后,将作一个简短的讨论。
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引用次数: 6
Global stability of a delayed and diffusive virus model with nonlinear infection function. 一类具有非线性感染函数的延迟扩散病毒模型的全局稳定性。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.1922770
Yan Geng, Jinhu Xu

This paper studies a delayed viral infection model with diffusion and a general incidence rate. A discrete-time model was derived by applying nonstandard finite difference scheme. The positivity and boundedness of solutions are presented. We established the global stability of equilibria in terms of R0 by applying Lyapunov method. The results showed that if R0 is less than 1, then the infection-free equilibrium E0 is globally asymptotically stable. If R0 is greater than 1, then the infection equilibrium E is globally asymptotically stable. Numerical experiments are carried out to illustrate the theoretical results.

本文研究了具有扩散和一般发病率的延迟病毒感染模型。采用非标准有限差分格式建立了离散时间模型。给出了解的正性和有界性。利用Lyapunov方法建立了R0下均衡的全局稳定性。结果表明,当R0小于1时,无感染平衡点E0是全局渐近稳定的。若R0大于1,则感染平衡点E *是全局渐近稳定的。数值实验对理论结果进行了验证。
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引用次数: 1
Parameter estimation from ICC curves. 从ICC曲线估计参数。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.1912419
Joceline Lega

Incidence vs. Cumulative Cases (ICC) curves are introduced and shown to provide a simple framework for parameter identification in the case of the most elementary epidemiological model, consisting of susceptible, infected, and removed compartments. This novel methodology is used to estimate the basic reproduction ratio of recent outbreaks, including those associated with the ongoing COVID-19 pandemic.

发病率与累积病例(ICC)曲线的引入和显示,为最基本的流行病学模型的参数识别提供了一个简单的框架,包括易感、感染和移除的区室。这种新方法用于估计最近疫情的基本再现率,包括与正在进行的COVID-19大流行相关的疫情。
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引用次数: 8
Effect of innate and adaptive immune mechanisms on treatment regimens in an AIDS-related Kaposi's Sarcoma model. 先天和适应性免疫机制对艾滋病相关卡波西肉瘤模型治疗方案的影响
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.1912420
Obias Mulenga Chimbola, Edward M Lungu, Barbara Szomolay

Kaposi Sarcoma (KS) is the most common AIDS-defining cancer, even as HIV-positive people live longer. Like other herpesviruses, human herpesvirus-8 (HHV-8) establishes a lifelong infection of the host that in association with HIV infection may develop at any time during the illness. With the increasing global incidence of KS, there is an urgent need of designing optimal therapeutic strategies for HHV-8-related infections. Here we formulate two models with innate and adaptive immune mechanisms, relevant for non-AIDS KS (NAKS) and AIDS-KS, where the initial condition of the second model is given by the equilibrium state of the first one. For the model with innate mechanism (MIM), we define an infectivity resistance threshold that will determine whether the primary HHV-8 infection of B-cells will progress to secondary infection of progenitor cells, a concept relevant for viral carriers in the asymptomatic phase. The optimal control strategy has been employed to obtain treatment efficacy in case of a combined antiretroviral therapy (cART). For the MIM we have shown that KS therapy alone is capable of reducing the HHV-8 load. In the model with adaptive mechanism (MAM), we show that if cART is administered at optimal levels, that is, 0.48 for protease inhibitors, 0.79 for reverse transcriptase inhibitors and 0.25 for KS therapy, both HIV-1 and HHV-8 can be reduced. The predictions of these mathematical models have the potential to offer more effective therapeutic interventions in the treatment of NAKS and AIDS-KS.

卡波西肉瘤(KS)是最常见的艾滋病定义癌症,即使hiv阳性的人寿命更长。与其他疱疹病毒一样,人类疱疹病毒-8 (HHV-8)在宿主体内建立终身感染,与HIV感染相关,可能在疾病期间的任何时间发生。随着全球KS发病率的增加,迫切需要设计hhv -8相关感染的最佳治疗策略。本文建立了非艾滋病性KS (NAKS)和艾滋病-KS两种具有先天免疫和适应性免疫机制的模型,其中第二个模型的初始条件由第一个模型的平衡状态给出。对于具有先天机制(MIM)的模型,我们定义了一个传染性抵抗阈值,该阈值将决定b细胞的原发性HHV-8感染是否会发展为祖细胞的继发性感染,这是一个与无症状期病毒携带者相关的概念。在抗逆转录病毒联合治疗(cART)的情况下,采用最优控制策略获得治疗效果。对于MIM,我们已经证明单独使用KS疗法能够减少HHV-8的载量。在具有自适应机制(MAM)的模型中,我们发现,如果cART以最佳水平施用,即蛋白酶抑制剂为0.48,逆转录酶抑制剂为0.79,KS治疗为0.25,HIV-1和HHV-8都可以降低。这些数学模型的预测有可能为NAKS和AIDS-KS的治疗提供更有效的治疗干预措施。
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引用次数: 0
A stochastic predator-prey model with Holling II increasing function in the predator. 捕食者中具有Holling II递增函数的随机捕食者-猎物模型。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2020.1859146
Youlin Huang, Wanying Shi, Chunjin Wei, Shuwen Zhang

This paper is concerned with a stochastic predator-prey model with Holling II increasing function in the predator. By applying the Lyapunov analysis method, we demonstrate the existence and uniqueness of the global positive solution. Then we show there is a stationary distribution which implies the stochastic persistence of the predator and prey in the model. Moreover, we obtain respectively sufficient conditions for weak persistence in the mean and extinction of the prey and extinction of the predator. Finally, some numerical simulations are given to illustrate our main results and the discussion and conclusion are presented.

本文研究了一个随机捕食者-猎物模型,该模型在捕食者中具有Holling II递增函数。利用Lyapunov分析方法,证明了全局正解的存在唯一性。然后我们证明了在模型中存在一个平稳分布,这意味着捕食者和猎物的随机持久性。此外,我们还分别得到了捕食者灭绝和被捕食者灭绝的充分条件。最后,通过一些数值模拟来说明我们的主要结果,并给出了讨论和结论。
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引用次数: 15
Stability and bifurcation analysis of an HIV-1 infection model with a general incidence and CTL immune response. 具有一般发病率和CTL免疫应答的HIV-1感染模型的稳定性和分岔分析。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.1950224
Xinsheng Ma, Yuhuai Zhang, Yuming Chen

In this paper, with eclipse stage in consideration, we propose an HIV-1 infection model with a general incidence rate and CTL immune response. We first study the existence and local stability of equilibria, which is characterized by the basic infection reproduction number R0 and the basic immunity reproduction number R1. The local stability analysis indicates the occurrence of transcritical bifurcations of equilibria. We confirm the bifurcations at the disease-free equilibrium and the infected immune-free equilibrium with transmission rate and the decay rate of CTLs as bifurcation parameters, respectively. Then we apply the approach of Lyapunov functions to establish the global stability of the equilibria, which is determined by the two basic reproduction numbers. These theoretical results are supported with numerical simulations. Moreover, we also identify the high sensitivity parameters by carrying out the sensitivity analysis of the two basic reproduction numbers to the model parameters.

在本文中,考虑到日食阶段,我们提出了一个具有一般发病率和CTL免疫反应的HIV-1感染模型。首先研究了以基本感染繁殖数R0和基本免疫繁殖数R1为特征的平衡点的存在性和局部稳定性。局部稳定性分析表明平衡点存在跨临界分岔。我们分别以ctl的传播率和衰变率作为分岔参数,确定了无病平衡和受感染免疫平衡的分岔。然后应用Lyapunov函数的方法,建立了由两个基本繁殖数决定的平衡点的全局稳定性。这些理论结果得到了数值模拟的支持。此外,我们还通过对两个基本再现数对模型参数的敏感性分析,确定了高灵敏度参数。
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引用次数: 3
Determining reliable parameter estimates for within-host and within-vector models of Zika virus. 确定寨卡病毒宿主内和媒介内模型的可靠参数估计。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.1970261
Necibe Tuncer, Maia Martcheva

In this paper, we introduce three within-host and one within-vector models of Zika virus. The within-host models are the target cell limited model, the target cell limited model with natural killer (NK) cells class, and a within-host-within-fetus model of a pregnant individual. The within-vector model includes the Zika virus dynamics in the midgut and salivary glands. The within-host models are not structurally identifiable with respect to data on viral load and NK cell counts. After rescaling, the scaled within-host models are locally structurally identifiable. The within-vector model is structurally identifiable with respect to viremia data in the midgut and salivary glands. Using Monte Carlo Simulations, we find that target cell limited model is practically identifiable from data on viremia; the target cell limited model with NK cell class is practically identifiable, except for the rescaled half saturation constant. The within-host-within-fetus model has all fetus-related parameters not practically identifiable without data on the fetus, as well as the rescaled half saturation constant is also not practically identifiable. The remaining parameters are practically identifiable. Finally we find that none of the parameters of the within-vector model is practically identifiable.

本文介绍了寨卡病毒的三种宿主内模型和一种媒介内模型。宿主内模型包括靶细胞受限模型、NK细胞类靶细胞受限模型和妊娠个体宿主-胎儿内模型。媒介内模型包括寨卡病毒在中肠和唾液腺中的动态。关于病毒载量和NK细胞计数的数据,宿主内模型在结构上无法识别。重新缩放后的主机内模型在局部结构上是可识别的。关于中肠和唾液腺的病毒血症数据,载体内模型在结构上是可识别的。利用蒙特卡罗模拟,我们发现靶细胞有限模型实际上可以从病毒血症数据中识别出来;NK细胞类别的靶细胞有限模型除了半饱和常数被重新缩放外,几乎是可识别的。在没有胎儿数据的情况下,内宿主内胎儿模型中所有与胎儿相关的参数都无法实际识别,并且重新缩放的半饱和常数也无法实际识别。其余参数实际上是可识别的。最后,我们发现向量内模型的参数没有一个是实际可识别的。
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引用次数: 7
A continuous-time mathematical model and discrete approximations for the aggregation of β-Amyloid. β-淀粉样蛋白聚集的连续时间数学模型和离散近似。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2020.1869843
Azmy S Ackleh, Saber Elaydi, George Livadiotis, Amy Veprauskas

Alzheimer's disease is a degenerative disorder characterized by the loss of synapses and neurons from the brain, as well as the accumulation of amyloid-based neuritic plaques. While it remains a matter of contention whether β-amyloid causes the neurodegeneration, β-amyloid aggregation is associated with the disease progression. Therefore, gaining a clearer understanding of this aggregation may help to better understand the disease. We develop a continuous-time model for β-amyloid aggregation using concepts from chemical kinetics and population dynamics. We show the model conserves mass and establish conditions for the existence and stability of equilibria. We also develop two discrete-time approximations to the model that are dynamically consistent. We show numerically that the continuous-time model produces sigmoidal growth, while the discrete-time approximations may exhibit oscillatory dynamics. Finally, sensitivity analysis reveals that aggregate concentration is most sensitive to parameters involved in monomer production and nucleation, suggesting the need for good estimates of such parameters.

阿尔茨海默病是一种退行性疾病,其特征是大脑突触和神经元的丧失,以及淀粉样蛋白神经斑块的积累。虽然β-淀粉样蛋白是否引起神经变性仍有争议,但β-淀粉样蛋白聚集与疾病进展有关。因此,更清楚地了解这种聚集可能有助于更好地了解这种疾病。我们利用化学动力学和种群动力学的概念开发了β-淀粉样蛋白聚集的连续时间模型。我们证明了该模型守恒质量,并建立了平衡存在和稳定的条件。我们还开发了两个离散时间近似的模型是动态一致的。我们在数值上表明,连续时间模型产生s型增长,而离散时间近似可能表现出振荡动力学。最后,敏感性分析表明,聚集体浓度对单体产生和成核的参数最敏感,这表明需要对这些参数进行良好的估计。
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引用次数: 4
Modelling homosexual and heterosexual transmissions of hepatitis B virus in China. 乙型肝炎病毒在中国同性恋和异性恋传播的模型。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.1896797
Min Lu, Yaqin Shu, Jicai Huang, Shigui Ruan, Xinan Zhang, Lan Zou

Studies have shown that sexual transmission, both heterosexually and homosexually, is one of the main ways of HBV infection. Based on this fact, we propose a mathematical model to study the sexual transmission of HBV among adults by classifying adults into men and women and considering both same-sex and opposite-sex transmissions of HBV in adults. Firstly, we calculate the basic reproduction number R0 and the disease-free equilibrium point E0. Secondly, by analysing the sensitivity of R0 in terms of model parameters, we find that the infection rate among people who have same-sex partners, the frequency of homosexual contact and the immunity rate of adults play important roles in the transmission of HBV. Moreover, we use our model to fit the reported data in China and forecast the trend of hepatitis B. Our results demonstrate that popularizing the basic knowledge of HBV among residents, advocating healthy and reasonable sexual life style, reducing the number of adult carriers, and increasing the immunization rate of adults are effective measures to prevent and control hepatitis B.

研究表明,性传播,无论是异性恋还是同性恋,都是HBV感染的主要途径之一。基于这一事实,我们提出了一个数学模型来研究成人中HBV的性传播,将成人分为男性和女性,并考虑成人中HBV的同性和异性传播。首先计算基本繁殖数R0和无病平衡点E0。其次,通过分析R0对模型参数的敏感性,我们发现同性伴侣的感染率、同性接触的频率和成年人的免疫率在HBV的传播中起重要作用。结果表明,在居民中普及乙肝基本知识,倡导健康合理的性生活方式,减少成人乙肝病毒携带者数量,提高成人乙肝疫苗接种率是预防和控制乙肝病毒的有效措施。
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引用次数: 0
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Journal of Biological Dynamics
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