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Complexity of host-vector dynamics in a two-strain dengue model. 两株登革热模型中宿主-媒介动力学的复杂性。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2020.1864038
Peter Rashkov, Bob W Kooi

We introduce a compartmental host-vector model for dengue with two viral strains, temporary cross-immunity for the hosts, and possible secondary infections. We study the conditions on existence of endemic equilibria where one strain displaces the other or the two virus strains co-exist. Since the host and vector epidemiology follow different time scales, the model is described as a slow-fast system. We use the geometric singular perturbation technique to reduce the model dimension. We compare the behaviour of the full model with that of the model with a quasi-steady approximation for the vector dynamics. We also perform numerical bifurcation analysis with parameter values from the literature and compare the bifurcation structure to that of previous two-strain host-only models.

我们介绍了一种具有两种病毒株的登革热区隔宿主-载体模型,宿主的暂时交叉免疫,以及可能的继发感染。研究了一株病毒取代另一株病毒或两株病毒共存时存在地方性平衡的条件。由于宿主和媒介流行病学遵循不同的时间尺度,该模型被描述为一个慢-快系统。我们使用几何奇异摄动技术来降低模型维数。我们比较了完整模型的行为与具有准稳定近似的向量动力学模型的行为。我们还使用文献中的参数值进行了数值分岔分析,并将分岔结构与之前的双应变纯宿主模型进行了比较。
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引用次数: 15
On the reproduction number in epidemics. 关于流行病中的繁殖数。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.2001584
Milan Batista

This note provides an elementary derivation of the basic reproduction number and the effective reproduction number from the discrete Kermack-McKendrick epidemic model. The derived formulae match those derived from the continuous version of the model; however, the derivation from discrete model is a bit more intuitive. The MATLAB functions for its calculation are given. A real case example is considered and the results are compared with those obtained by the R0 and the EpiEstim software packages.

本文给出了离散Kermack-McKendrick流行病模型的基本再现数和有效再现数的初等推导。导出的公式与模型连续版本的公式相匹配;然而,离散模型的推导更直观一些。给出了其计算的MATLAB函数。结合实际算例,与R0和EpiEstim软件包的计算结果进行了比较。
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引用次数: 3
The impact of poaching and regime switching on the dynamics of single-species model. 偷猎和制度转换对单物种模型动力学的影响。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.1914757
Pengcheng Du, Yunhua Liao

It is widely recognized that the criminal act of poaching has brought tremendous damage to biodiversity. This paper employs a stochastic single-species model with regime switching to investigate the impact of poaching. We first carry out the survival analysis and obtain sufficient conditions for the extinction and persistence in mean of the single-species population. Then, we show that the model is positive recurrent by constructing suitable Lyapunov function. Finally, numerical simulations are carried out to support our theoretical results. It is found that: (i) As the intensity of poaching increases, the odds of being at risk of extinction increases for the single-species population. (ii) The regime switching can suppress the extinction of the single-species population. (iii) The white noise is detrimental to the survival of the single-species population. (iv) Increasing the criminal cost of poaching and establishing animal sanctuaries are important ways to protect biodiversity.

众所周知,偷猎犯罪行为给生物多样性带来了巨大的破坏。本文采用一个随机的单物种状态切换模型来研究偷猎的影响。首先进行了生存分析,得到了单种种群灭绝和存续的充分条件。然后,我们通过构造合适的李雅普诺夫函数来证明模型是正循环的。最后,通过数值模拟验证了理论结果。研究发现:(i)随着偷猎活动的加剧,单一物种种群面临灭绝危险的几率也在增加。(2)制度转换可以抑制单种种群的灭绝。(三)白噪音不利于单一物种的生存。(四)提高偷猎犯罪成本和建立动物保护区是保护生物多样性的重要途径。
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引用次数: 1
On the basic reproduction number in semi-Markov switching networks. 半马尔可夫交换网络的基本复制数。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2020.1867246
Xiaochun Cao, Zhen Jin, Guirong Liu, Michael Y Li

Basic reproduction number R0 in network epidemic dynamics is studied in the case of stochastic regime-switching networks. For generality, the dependence between successive networks is considered to follow a continuous time semi-Markov chain. R0 is the weighted average of the basic reproduction numbers of deterministic subnetworks. Its position with respect to 1 can determine epidemic persistence or extinction in theories and simulations.

研究了随机状态交换网络中网络流行病动力学中的基本复制数R0。为了通用性,考虑连续网络之间的依赖遵循连续时间半马尔可夫链。R0是确定性子网的基本复制数的加权平均值。在理论和模拟中,它相对于1的位置可以决定流行病的持续或灭绝。
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引用次数: 1
Long-term transmission dynamics of tick-borne diseases involving seasonal variation and co-feeding transmission. 涉及季节变化和共食传播的蜱传疾病的长期传播动力学。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.1919322
Kyeongah Nah, Jianhong Wu

Co-feeding is a mode of pathogen transmission for a wide range of tick-borne diseases where susceptible ticks can acquire infection from co-feeding with infected ticks on the same hosts. The significance of this transmission pathway is determined by the co-occurrence of ticks at different stages in the same season. Taking this into account, we formulate a system of differential equations with tick population dynamics and pathogen transmission dynamics highly regulated by the seasonal temperature variations. We examine the global dynamics of the model systems, and show that the two important ecological and epidemiological basic reproduction numbers can be used to fully characterize the long-term dynamics, and we link these two important threshold values to efficacy of co-feeding transmission.

共食是多种蜱传疾病的一种病原体传播方式,其中易感蜱可通过与同一宿主上的受感染蜱共食而感染。蜱虫在同一季节不同阶段的共存决定了这一传播途径的重要性。考虑到这一点,我们建立了蜱虫种群动态和病原体传播动态受季节温度变化高度调节的微分方程组。我们研究了模型系统的全球动态,并表明两个重要的生态和流行病学基本繁殖数可以用来充分表征长期动态,并将这两个重要的阈值与共食传播的有效性联系起来。
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引用次数: 3
Dynamic mechanism of multiple bursting patterns in a whole-cell multiscale model with calcium oscillations. 含钙振荡的全细胞多尺度模型中多种破裂模式的动力机制。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.1925753
Xiaowen Xiong, Yanqiu Li, Dongmei Zheng

The dynamic mechanism of a whole-cell model containing electrical signalling and two-compartment Ca2+ signalling in gonadotrophs is investigated. The transition from spiking to bursting by Hopf bifurcation of the fast subsystem about the slow variable is detected via the suitable parameters. When the timescale of K+ gating variable is changed, the relaxation oscillation with locally small fluctuation, chaotic bursting and mixed-mode bursting (MMB) are revealed through chaos. In addition, the bifurcation of [Ca2+]i with regard to [IP3] is analysed, showing periodic solutions, torus, period doubling solutions and chaos. Finally, hyperpolarizations and torus canard-like behaviours of the full system under a set of specific parameters are elucidated.

研究了促性腺激素中含有电信号和双室Ca2+信号的全细胞模型的动态机制。通过适当的参数检测快子系统关于慢变量的Hopf分岔从尖峰到爆发的转变。当K+门控变量的时间尺度改变时,通过混沌表现出局域小波动的松弛振荡、混沌爆破和混合模式爆破(MMB)。此外,分析了[Ca2+]i对[IP3]的分岔,显示了周期解、环面、周期加倍解和混沌。最后,在一组特定参数下,阐明了整个系统的超极化和环面鸭状行为。
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引用次数: 1
A discrete-time risk-structured model of cholera infections in Cameroon. 喀麦隆霍乱感染的离散时间风险结构模型。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.1991497
Eric Che, Abdul-Aziz Yakubu

In a recent paper, Che et al. [5] used a continuous-time Ordinary Differential Equation (ODE) model with risk structure to study cholera infections in Cameroon. However, the population and the reported cholera cases in Cameroon are censored at discrete-time annual intervals. In this paper, unlike in [5], we introduce a discrete-time risk-structured cholera model with no spatial structure. We use our discrete-time demographic equation to 'fit' the annual population of Cameroon. Furthermore, we use our fitted discrete-time model to capture the annually reported cholera cases from 1987 to 2004 and to study the impact of vaccination, treatment and improved sanitation on the number of cholera infections from 2004 to 2019. Our discrete-time cholera model confirms the results of the ODE model in [5]. However, our discrete-time model predicts a decrease in the number of cholera cases in a shorter period of cholera intervention (2004-2019) as compared to the ODE model's period of intervention (2004-2022).

在最近的一篇论文中,Che等[5]使用具有风险结构的连续时间常微分方程(ODE)模型研究了喀麦隆的霍乱感染。然而,喀麦隆的人口和报告的霍乱病例在每年的离散时间间隔进行审查。与文献[5]不同的是,本文引入了一个离散时间风险结构的霍乱模型,没有空间结构。我们使用离散时间人口方程来“拟合”喀麦隆的年人口。此外,我们使用我们的拟合离散时间模型来捕获1987年至2004年每年报告的霍乱病例,并研究2004年至2019年接种疫苗、治疗和改善卫生条件对霍乱感染人数的影响。我们的离散时间霍乱模型证实了[5]中ODE模型的结果。然而,我们的离散时间模型预测,与ODE模型的干预期(2004-2022)相比,在较短的霍乱干预期(2004-2019),霍乱病例数会减少。
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引用次数: 2
Impulsive release strategies of sterile mosquitos for optimal control of wild population. 不育蚊脉冲释放策略对野生种群的优化控制。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.1887380
Mingzhan Huang, Lei You, Shouzong Liu, Xinyu Song

To investigate the release strategies of sterile mosquitoes for the wild population control, we propose mathematical models for the interaction between two-mosquito populations incorporating impulsive releases of sterile ones. The long-term control model is first studied, and the existence and stability of the wild mosquito-extinction periodic solution are exploited. Thresholds of the release amount and release period which can guarantee the elimination of the wild mosquitos are obtained. Then for the limited-time control model, three different optimal strategies in impulsive control are investigated. By applying a time rescaling technique and an optimization algorithm based on gradient, the optimal impulsive release timings and amounts of sterile mosquitoes are obtained. Our results show that the optimal selection of release timing is more important than the optimal selection of release amount, while mixed optimal control has the best comprehensive effect.

为了研究野生种群控制中不育蚊的释放策略,我们建立了包含不育蚊脉冲释放的两种群相互作用的数学模型。首先研究了长期控制模型,探讨了野生蚊灭周期解的存在性和稳定性。确定了能保证消灭野蚊的释放量和释放期的阈值。针对有限时间控制模型,研究了三种不同的脉冲控制最优策略。采用时间重标技术和基于梯度的优化算法,获得最佳脉冲释放时间和不育蚊数量。结果表明,释放时间的最优选择比释放量的最优选择更为重要,混合最优控制具有最佳的综合效果。
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引用次数: 7
Universality of stable multi-cluster periodic solutions in a population model of the cell cycle with negative feedback. 负反馈细胞周期种群模型中稳定多簇周期解的通用性。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.1971781
Kiattisak Prathom, Todd R Young

We study a population model where cells in one part of the cell cycle may affect the progress of cells in another part. If the influence, or feedback, from one part to another is negative, simulations of the model almost always result in multiple temporal clusters formed by groups of cells. We study regions in parameter space where periodic 'k-cyclic' solutions are stable. The regions of stability coincide with sub-triangles on which certain events occur in a fixed order. For boundary sub-triangles with order 'rs1', we prove that the k-cyclic periodic solution is asymptotically stable if the index of the sub-triangle is relatively prime with respect to the number of clusters k and neutrally stable otherwise. For negative linear feedback, we prove that the interior of the parameter set is covered by stable sub-triangles, i.e. a stable k-cyclic solution always exists for some k. We observe numerically that the result also holds for many forms of nonlinear feedback, but may break down in extreme cases.

我们研究了一个群体模型,其中细胞周期的一部分细胞可能影响另一部分细胞的进展。如果从一个部分到另一个部分的影响或反馈是负的,则模型的模拟几乎总是导致由细胞群形成的多个时间簇。我们研究了参数空间中周期“k-循环”解稳定的区域。稳定区域与子三角形重合,在这些子三角形上某些事件以固定的顺序发生。对于阶为'rs1'的边界子三角形,证明了如果子三角形的指数相对于簇k的数目是相对素数,则k循环周期解是渐近稳定的,否则证明了k循环周期解是中性稳定的。对于负线性反馈,我们证明了参数集的内部被稳定的子三角形覆盖,即对于某个k,一个稳定的k循环解总是存在。我们在数值上观察到,该结果也适用于许多形式的非线性反馈,但在极端情况下可能会失效。
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引用次数: 0
Homogenous mixing and network approximations in discrete-time formulation of a SIRS model. SIRS模型离散时间公式中的均匀混合和网络近似。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.2005835
Ilaria Renna

A discrete-time deterministic epidemic model is proposed to better understand the contagious dynamics and the behaviour observed in the incidence of real infectious diseases. For this purpose, we analyse a SIRS model both in a random-mixing approach and in a small-world network formulation. The models include the basic parameters that characterize an epidemic: infection and recovery times, as well as mechanisms of contagion. Depending on the parameters, the random-mixing model has different types of behaviour of an epidemic: pathogen extinction; endemic infection; sustained oscillations and dynamic extinction. Spatial effects are included in our network-based approach, where each individual of a population is represented by a node of a small-world network. Our network-based approach includes rewiring connections to account for time-varying network structure, a consequence of the natural response to the emergence of an epidemic (e.g. avoiding contacts with infected individuals). Random and adaptive rewiring conditions are analysed and numerical simulation are made. A comparison of model predictions with the actual effects of COVID-19 infection on population that occurred in Italy and France is produced. Results of the time series of infected people show that our adaptive evolving networks represent effective strategies able to decrease the epidemic spreading.

提出了一种离散时间确定性流行病模型,以更好地理解传染病的传染动力学和在实际传染病发病率中观察到的行为。为此,我们在随机混合方法和小世界网络公式中分析了SIRS模型。这些模型包括表征流行病的基本参数:感染和恢复时间,以及传染机制。根据参数的不同,随机混合模型具有不同类型的流行病行为:病原体灭绝;流行感染;持续振荡和动态消光。空间效应包括在我们基于网络的方法中,其中人口的每个个体都由小世界网络的节点表示。我们基于网络的方法包括重新布线连接,以考虑时变的网络结构,这是对流行病出现的自然反应的结果(例如,避免与受感染的个体接触)。分析了随机和自适应重布线条件,并进行了数值模拟。将模型预测与意大利和法国发生的COVID-19感染对人口的实际影响进行了比较。感染者的时间序列结果表明,我们的自适应进化网络代表了能够减少流行病传播的有效策略。
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引用次数: 1
期刊
Journal of Biological Dynamics
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