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Impulsive release strategies of sterile mosquitos for optimal control of wild population. 不育蚊脉冲释放策略对野生种群的优化控制。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.1887380
Mingzhan Huang, Lei You, Shouzong Liu, Xinyu Song

To investigate the release strategies of sterile mosquitoes for the wild population control, we propose mathematical models for the interaction between two-mosquito populations incorporating impulsive releases of sterile ones. The long-term control model is first studied, and the existence and stability of the wild mosquito-extinction periodic solution are exploited. Thresholds of the release amount and release period which can guarantee the elimination of the wild mosquitos are obtained. Then for the limited-time control model, three different optimal strategies in impulsive control are investigated. By applying a time rescaling technique and an optimization algorithm based on gradient, the optimal impulsive release timings and amounts of sterile mosquitoes are obtained. Our results show that the optimal selection of release timing is more important than the optimal selection of release amount, while mixed optimal control has the best comprehensive effect.

为了研究野生种群控制中不育蚊的释放策略,我们建立了包含不育蚊脉冲释放的两种群相互作用的数学模型。首先研究了长期控制模型,探讨了野生蚊灭周期解的存在性和稳定性。确定了能保证消灭野蚊的释放量和释放期的阈值。针对有限时间控制模型,研究了三种不同的脉冲控制最优策略。采用时间重标技术和基于梯度的优化算法,获得最佳脉冲释放时间和不育蚊数量。结果表明,释放时间的最优选择比释放量的最优选择更为重要,混合最优控制具有最佳的综合效果。
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引用次数: 7
Universality of stable multi-cluster periodic solutions in a population model of the cell cycle with negative feedback. 负反馈细胞周期种群模型中稳定多簇周期解的通用性。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.1971781
Kiattisak Prathom, Todd R Young

We study a population model where cells in one part of the cell cycle may affect the progress of cells in another part. If the influence, or feedback, from one part to another is negative, simulations of the model almost always result in multiple temporal clusters formed by groups of cells. We study regions in parameter space where periodic 'k-cyclic' solutions are stable. The regions of stability coincide with sub-triangles on which certain events occur in a fixed order. For boundary sub-triangles with order 'rs1', we prove that the k-cyclic periodic solution is asymptotically stable if the index of the sub-triangle is relatively prime with respect to the number of clusters k and neutrally stable otherwise. For negative linear feedback, we prove that the interior of the parameter set is covered by stable sub-triangles, i.e. a stable k-cyclic solution always exists for some k. We observe numerically that the result also holds for many forms of nonlinear feedback, but may break down in extreme cases.

我们研究了一个群体模型,其中细胞周期的一部分细胞可能影响另一部分细胞的进展。如果从一个部分到另一个部分的影响或反馈是负的,则模型的模拟几乎总是导致由细胞群形成的多个时间簇。我们研究了参数空间中周期“k-循环”解稳定的区域。稳定区域与子三角形重合,在这些子三角形上某些事件以固定的顺序发生。对于阶为'rs1'的边界子三角形,证明了如果子三角形的指数相对于簇k的数目是相对素数,则k循环周期解是渐近稳定的,否则证明了k循环周期解是中性稳定的。对于负线性反馈,我们证明了参数集的内部被稳定的子三角形覆盖,即对于某个k,一个稳定的k循环解总是存在。我们在数值上观察到,该结果也适用于许多形式的非线性反馈,但在极端情况下可能会失效。
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引用次数: 0
Homogenous mixing and network approximations in discrete-time formulation of a SIRS model. SIRS模型离散时间公式中的均匀混合和网络近似。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.2005835
Ilaria Renna

A discrete-time deterministic epidemic model is proposed to better understand the contagious dynamics and the behaviour observed in the incidence of real infectious diseases. For this purpose, we analyse a SIRS model both in a random-mixing approach and in a small-world network formulation. The models include the basic parameters that characterize an epidemic: infection and recovery times, as well as mechanisms of contagion. Depending on the parameters, the random-mixing model has different types of behaviour of an epidemic: pathogen extinction; endemic infection; sustained oscillations and dynamic extinction. Spatial effects are included in our network-based approach, where each individual of a population is represented by a node of a small-world network. Our network-based approach includes rewiring connections to account for time-varying network structure, a consequence of the natural response to the emergence of an epidemic (e.g. avoiding contacts with infected individuals). Random and adaptive rewiring conditions are analysed and numerical simulation are made. A comparison of model predictions with the actual effects of COVID-19 infection on population that occurred in Italy and France is produced. Results of the time series of infected people show that our adaptive evolving networks represent effective strategies able to decrease the epidemic spreading.

提出了一种离散时间确定性流行病模型,以更好地理解传染病的传染动力学和在实际传染病发病率中观察到的行为。为此,我们在随机混合方法和小世界网络公式中分析了SIRS模型。这些模型包括表征流行病的基本参数:感染和恢复时间,以及传染机制。根据参数的不同,随机混合模型具有不同类型的流行病行为:病原体灭绝;流行感染;持续振荡和动态消光。空间效应包括在我们基于网络的方法中,其中人口的每个个体都由小世界网络的节点表示。我们基于网络的方法包括重新布线连接,以考虑时变的网络结构,这是对流行病出现的自然反应的结果(例如,避免与受感染的个体接触)。分析了随机和自适应重布线条件,并进行了数值模拟。将模型预测与意大利和法国发生的COVID-19感染对人口的实际影响进行了比较。感染者的时间序列结果表明,我们的自适应进化网络代表了能够减少流行病传播的有效策略。
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引用次数: 1
Estimating the risk of pandemic avian influenza. 估计禽流感大流行的风险。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.1942570
Amita Tripathi, Harish Chandra Dhakal, Khagendra Adhikari, Ramesh Chandra Timsina, Lindi M Wahl

Outbreaks of highly pathogenic strains of avian influenza (HPAI) cause high mortality in avian populations worldwide. When spread from avian reservoirs to humans, HPAI infections cause mortality in about 50% of human infections. Cases of human-to-human transmission of HPAI are relatively rare, and have, to date, only been reported in situations of close contact. These transmissions have resulted in isolated clusters of human HPAI infections, but have not yet caused a pandemic. Given the large number of human H5N1 HPAI infections to date, none of which has resulted in a pandemic, we estimate an upper bound on the probability of H5N1 pandemic emergence. We use this estimate to provide the likelihood of observing such a pandemic over the next decade. We then develop a more accurate parameter-based estimate of the emergence probability and predict the likelihood that, through rare mutations, an H5N1 influenza pandemic will emerge over the same time span.

高致病性禽流感(HPAI)的爆发在全世界的禽类种群中造成了高死亡率。当从禽类宿主传播给人类时,高致病性禽流感感染导致约50%的人类感染死亡。高致病性禽流感的人际传播病例相对罕见,迄今仅在密切接触的情况下报告。这些传播导致了人类高致病性禽流感感染的孤立聚集,但尚未造成大流行。鉴于迄今为止发生的大量H5N1高致病性禽流感人间感染,但没有一起导致大流行,我们估计H5N1大流行发生的概率有一个上限。我们使用这一估计来提供在未来十年观察到这种大流行的可能性。然后,我们对出现概率进行更准确的基于参数的估计,并预测通过罕见突变在同一时间跨度内出现H5N1流感大流行的可能性。
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引用次数: 2
Chimera and cluster collective states in a dispersal ecological network under state-dependent feedback control and complex habitat structure. 状态依赖反馈控制和复杂生境结构下弥散生态网络中的嵌合体和集群集体状态。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2021.1992518
Yi Yang, Lirong Liu, Changcheng Xiang, Wenjie Qin

Pest control based on an economic threshold (ET) can effectively prevent excessive pest control measures such as pesticide abuse and overharvesting. The instinctive dispersal of pest populations in biological network patches for better survival poses challenges for pest management. As long as the pest density is controlled below the economic threshold and no pest outbreak occurs, the aim of pest management can be achieved and it is not necessary to completely remove the pests. This study focuses on the issues of chimera states and cluster solutions in regular bidirectional biological networks with state-dependent impulsive pest management. We consider the influence of two different control modes on the system states, namely global control and local control. Local control is found to be more likely to induce the chimera state. In addition, in the local coupling mode, a higher coupling strength is more likely to generate a coherent state, whereas a lower coupling strength is more likely to generate chimera and incoherent states. Furthermore, the cluster size is inversely related to the coupling strength under local coupling and global control.

基于经济阈值(ET)的虫害防治可以有效防止滥用农药和过度采收等过度虫害防治措施。为了更好地生存,害虫种群本能地在生物网络斑块中扩散,这对害虫管理提出了挑战。只要将有害生物密度控制在经济阈值以下,不发生病虫害暴发,就可以达到有害生物治理的目的,不需要完全消灭有害生物。本文主要研究了具有状态依赖脉冲害虫管理的规则双向生物网络的嵌合体状态和聚类解问题。我们考虑了两种不同的控制模式对系统状态的影响,即全局控制和局部控制。局部控制更容易诱导嵌合体状态。此外,在局部耦合模式下,高耦合强度更容易产生相干态,而低耦合强度更容易产生嵌合态和非相干态。此外,在局部耦合和全局控制下,聚类大小与耦合强度成反比。
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引用次数: 0
Transmission rates and environmental reservoirs for COVID-19 - a modeling study. COVID-19 的传播率和环境库--一项模型研究。
IF 1.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-12-01 DOI: 10.1080/17513758.2020.1869844
Chayu Yang, Jin Wang

The coronavirus disease 2019 (COVID-19) remains a global pandemic at present. Although the human-to-human transmission route for this disease has been well established, its transmission mechanism is not fully understood. In this paper, we propose a mathematical model for COVID-19 which incorporates multiple transmission pathways and which employs time-dependent transmission rates reflecting the impact of disease prevalence and outbreak control. Applying this model to a retrospective study based on publicly reported data in China, we argue that the environmental reservoirs play an important role in the transmission and spread of the coronavirus. This argument is supported by our data fitting and numerical simulation results for the city of Wuhan, for the provinces of Hubei and Guangdong, and for the entire country of China.

目前,2019 年冠状病毒病(COVID-19)仍是一种全球性流行病。虽然该疾病的人际传播途径已经确定,但其传播机制尚未完全明了。本文提出了 COVID-19 的数学模型,该模型包含多种传播途径,并采用了随时间变化的传播率,反映了疾病流行和疫情控制的影响。将该模型应用于一项基于中国公开报道数据的回顾性研究,我们认为环境储库在冠状病毒的传播和扩散中发挥了重要作用。我们对武汉市、湖北省和广东省以及整个中国的数据拟合和数值模拟结果都支持这一论点。
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引用次数: 0
Building mean field ODE models using the generalized linear chain trick & Markov chain theory. 利用广义线性链技巧和马尔可夫链理论建立平均场ODE模型。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-05-01 Epub Date: 2021-04-13 DOI: 10.1080/17513758.2021.1912418
Paul J Hurtado, Cameron Richards

The well known linear chain trick (LCT) allows modellers to derive mean field ODEs that assume gamma (Erlang) distributed passage times, by transitioning individuals sequentially through a chain of sub-states. The time spent in these sub-states is the sum of k exponentially distributed random variables, and is thus gamma distributed. The generalized linear chain trick (GLCT) extends this technique to the broader phase-type family of distributions, which includes exponential, Erlang, hypoexponential, and Coxian distributions. Phase-type distributions are the family of matrix exponential distributions on [0,) that represent the absorption time distributions for finite-state, continuous time Markov chains (CTMCs). Here we review CTMCs and phase-type distributions, then illustrate how to use the GLCT to efficiently build ODE models from underlying stochastic model assumptions. We introduce two novel model families by using the GLCT to generalize the Rosenzweig-MacArthur predator-prey model, and the SEIR model. We illustrate the kinds of complexity that can be captured by such models through multiple examples. We also show the benefits of using a GLCT-based model formulation to speed up the computation of numerical solutions to such models. These results highlight the intuitive nature, and utility, of using the GLCT to derive ODE models from first principles.

众所周知的线性链技巧(LCT)允许建模者通过在子状态链中依次转换个体,得出假设伽马(Erlang)分布通过时间的平均场ode。在这些子状态中花费的时间是k个指数分布的随机变量的和,因此是伽马分布的。广义线性链技巧(GLCT)将该技术扩展到更广泛的相类型分布族,其中包括指数分布、Erlang分布、次指数分布和Coxian分布。相型分布是在[0,∞)上的矩阵指数分布族,表示有限状态连续时间马尔可夫链(ctmc)的吸收时间分布。在这里,我们回顾了ctmc和相位类型分布,然后说明了如何使用GLCT从底层随机模型假设有效地构建ODE模型。利用GLCT对Rosenzweig-MacArthur捕食者-猎物模型和SEIR模型进行了推广,引入了两个新的模型族。我们通过多个示例说明了这种模型可以捕获的各种复杂性。我们还展示了使用基于glct的模型公式来加速此类模型数值解的计算的好处。这些结果突出了使用GLCT从第一原理派生ODE模型的直观性质和实用性。
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引用次数: 5
Modelling the risk of HIV infection for drug abusers. 对药物滥用者感染艾滋病毒的风险进行建模。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-05-01 Epub Date: 2020-11-07 DOI: 10.1080/17513758.2020.1842921
Angelica Bloomquist, Naveen K Vaidya

Drugs of abuse, such as opiates, are one of the leading causes for transmission of HIV in many parts of the world. Drug abusers often face a higher risk of acquiring HIV because target cell (CD4+ T-cell) receptor expression differs in response to morphine, a metabolite of common opiates. In this study, we use a viral dynamics model that incorporates the T-cell expression difference to formulate the probability of infection among drug abusers. We quantify how the risk of infection is exacerbated in morphine conditioning, depending on the timings of morphine intake and virus exposure. With in-depth understanding of the viral dynamics and the increased risk for these individuals, we further evaluate how preventive therapies, including pre- and post-exposure prophylaxis, affect the infection risk in drug abusers. These results are useful to devise ideal treatment protocols to combat the several obstacles those under drugs of abuse face.

滥用药物,如阿片类药物,是世界许多地区艾滋病毒传播的主要原因之一。由于靶细胞(CD4+ t细胞)受体对吗啡(一种常见阿片类药物的代谢物)的反应不同,药物滥用者通常面临更高的感染艾滋病毒的风险。在这项研究中,我们使用病毒动力学模型,结合t细胞表达差异来制定吸毒者感染的可能性。我们量化了在吗啡条件下感染的风险是如何加剧的,这取决于吗啡摄入和病毒暴露的时间。随着对病毒动力学和这些个体风险增加的深入了解,我们进一步评估预防性治疗,包括暴露前和暴露后预防,如何影响药物滥用者的感染风险。这些结果有助于设计理想的治疗方案,以对抗药物滥用者面临的几个障碍。
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引用次数: 3
Dynamics of a diffusive vaccination model with therapeutic impact and non-linear incidence in epidemiology. 具有治疗影响和流行病学非线性发生率的扩散疫苗模型的动力学。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-05-01 Epub Date: 2020-11-18 DOI: 10.1080/17513758.2020.1849831
Md Kamrujjaman, Md Shahriar Mahmud, Md Shafiqul Islam

In this paper, we study a more general diffusive spatially dependent vaccination model for infectious disease. In our diffusive vaccination model, we consider both therapeutic impact and nonlinear incidence rate. Also, in this model, the number of compartments of susceptible, vaccinated and infectious individuals are considered to be functions of both time and location, where the set of locations (equivalently, spatial habitats) is a subset of Rn with a smooth boundary. Both local and global stability of the model are studied. Our study shows that if the threshold level R01, the disease-free equilibrium E0 is globally asymptotically stable. On the other hand, if R0>1 then there exists a unique stable disease equilibrium E. The existence of solutions of the model and uniform persistence results are studied. Finally, using finite difference scheme, we present a number of numerical examples to verify our analytical results. Our results indicate that the global dynamics of the model are completely determined by the threshold value R0.

在本文中,我们研究了一个更一般的传染病扩散空间依赖疫苗接种模型。在我们的扩散疫苗模型中,我们同时考虑了治疗效果和非线性发病率。此外,在该模型中,易感个体、接种个体和感染个体的隔室数被认为是时间和位置的函数,其中位置集(相当于空间栖息地)是具有光滑边界的Rn子集。研究了模型的局部稳定性和全局稳定性。我们的研究表明,当阈值水平R0≤1时,无病平衡E0是全局渐近稳定的。另一方面,如果R0>1,则存在唯一的稳定疾病平衡点E *。研究了模型解的存在性和均匀持续性结果。最后,我们用有限差分格式给出了一些数值例子来验证我们的分析结果。结果表明,模型的全局动力学完全由阈值R0决定。
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引用次数: 7
A stage-structured population model for activity-dependent dendritic spines. 活动依赖树突棘的阶段结构种群模型。
IF 2.8 4区 数学 Q3 ECOLOGY Pub Date : 2021-05-01 Epub Date: 2020-12-04 DOI: 10.1080/17513758.2020.1839136
Morteza Rouhani, Steven M Baer, Sharon M Crook

Here we present a novel application of stage-structured population modelling to explore the properties of neuronal dendrites with spines. Dendritic spines are small protrusions that emanate from the dendritic shaft of several functionally important neurons in the cerebral cortex. They are the postsynaptic sites of over 90% of excitatory synapses in the mammalian brain. Here, we formulate a stage-structured population model of a passive dendrite with activity-dependent spines using a continuum approach. This computational study models three dynamic populations of activity-dependent spine types, corresponding to the anatomical categories of stubby, mushroom, and thin spines. In this stage-structured population model, transitions between spine type populations are driven by calcium levels that depend on local electrical activity. We explore the influence of the changing spine populations and spine types on the development of electrical propagation pathways in response to repetitive synaptic input, and which input frequencies are best for facilitating these pathways.

在这里,我们提出了一种新的应用阶段结构人口模型来探索具有棘的神经元树突的特性。树突棘是大脑皮层中几个功能重要的神经元的树突轴上产生的小突起。它们是哺乳动物大脑中超过90%的兴奋性突触的突触后位点。在这里,我们制定了一个阶段结构的人口模型的被动树突与活动依赖的棘使用连续体方法。本计算研究模拟了三种动态种群的活动依赖脊柱类型,对应于粗短,蘑菇和细刺的解剖类别。在这个阶段结构的种群模型中,脊椎类型种群之间的过渡是由依赖于局部电活动的钙水平驱动的。我们探讨了不断变化的脊柱种群和脊柱类型对响应重复突触输入的电传播通路发展的影响,以及哪种输入频率最有利于促进这些通路。
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引用次数: 1
期刊
Journal of Biological Dynamics
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