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Bounding the generation time distribution uncertainty on R0 estimation from exponential growth rates. 从指数增长率估算 R0 的世代时间分布不确定性边界。
IF 1.8 4区 数学 Q3 ECOLOGY Pub Date : 2024-12-01 Epub Date: 2024-10-16 DOI: 10.1080/17513758.2024.2410720
James Cochran, Bogdan Oancea, Dan Pirjol

The basic reproduction number R0 is one of the main parameters determining the spreading of an epidemic in a population of susceptible individuals. Wallinga and Lipsitch proposed a method for estimating R0 using the Euler-Lotka equation, which requires the Laplace transform of the generation interval distribution. The determination of the generation time distribution is challenging, as the generation time is not directly observable. We prove upper and lower bounds on R0 using only the first few moments of the generation interval distributions and study the sensitivity of the bounds to these parameters. The bounds do not require the exact shape of the generation interval distribution and give robust estimates of the r-R0 relationship.

基本繁殖数 R0 是决定流行病在易感人群中传播的主要参数之一。Wallinga 和 Lipsitch 提出了一种利用欧拉-洛特卡方程估算 R0 的方法,该方法需要对世代间隔分布进行拉普拉斯变换。确定世代时间分布具有挑战性,因为世代时间无法直接观测。我们仅利用发电间隔分布的前几个时刻就证明了 R0 的上界和下界,并研究了边界对这些参数的敏感性。这些界值不需要发电间隔分布的确切形状,并给出了 R-R0 关系的稳健估计值。
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引用次数: 0
Modeling and analysis of a multilayer solid tumour with cell physiological age and resource limitations. 具有细胞生理年龄和资源限制的多层实体肿瘤建模与分析
IF 1.8 4区 数学 Q3 ECOLOGY Pub Date : 2024-12-01 Epub Date: 2023-12-22 DOI: 10.1080/17513758.2023.2295492
Zhonghu Luo, Zijian Liu, Yuanshun Tan, Jin Yang

We study an avascular spherical solid tumour model with cell physiological age and resource constraints in vivo. We divide the tumour cells into three components: proliferating cells, quiescent cells and dead cells in necrotic core. We assume that the division rate of proliferating cells is nonlinear due to the nutritional and spatial constraints. The proportion of newborn tumour cells entering directly into quiescent state is considered, since this proportion can respond to the therapeutic effect of drug. We establish a nonlinear age-structured tumour cell population model. We investigate the existence and uniqueness of the model solution and explore the local and global stabilities of the tumour-free steady state. The existence and local stability of the tumour steady state are studied. Finally, some numerical simulations are performed to verify the theoretical results and to investigate the effects of different parameters on the model.

我们研究了一个无血管球形实体肿瘤模型,该模型具有细胞生理年龄和体内资源限制。我们将肿瘤细胞分为三部分:增殖细胞、静止细胞和坏死核心中的死亡细胞。我们假设由于营养和空间限制,增殖细胞的分裂率是非线性的。我们考虑了直接进入静止状态的新生肿瘤细胞的比例,因为这部分细胞会对药物的治疗效果做出反应。我们建立了一个非线性年龄结构肿瘤细胞群体模型。我们研究了模型解的存在性和唯一性,并探讨了无肿瘤稳态的局部和全局稳定性。研究了肿瘤稳态的存在性和局部稳定性。最后,我们进行了一些数值模拟,以验证理论结果并研究不同参数对模型的影响。
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引用次数: 0
The role of long-lived plasma cells in viral clearance. 长寿命浆细胞在病毒清除中的作用。
IF 1.8 4区 数学 Q3 ECOLOGY Pub Date : 2024-12-01 Epub Date: 2024-03-06 DOI: 10.1080/17513758.2024.2325523
Mingran Zhang, Meili Li, Junling Ma

The adaptive immune system has two types of plasma cells (PC), long-lived plasma cells (LLPC) and short-lived plasma cells (SLPC), that differ in their lifespan. In this paper, we propose that LLPC is crucial to the clearance of viral particles in addition to reducing the viral basic reproduction number in secondary infections. We use a sequence of within-host mathematical models to show that, CD8 T cells, SLPC and memory B cells cannot achieve full viral clearance, and the viral load will reach a low positive equilibrium level because of a continuous replenishment of target cells. However, the presence of LLPC is crucial for viral clearance.

适应性免疫系统有两种类型的浆细胞(PC),即长寿命浆细胞(LLPC)和短寿命浆细胞(SLPC),它们的寿命各不相同。在本文中,我们提出长寿命浆细胞除了在二次感染中减少病毒的基本繁殖数量外,对清除病毒颗粒也至关重要。我们利用一系列宿主内数学模型证明,CD8 T 细胞、SLPC 和记忆 B 细胞无法实现完全清除病毒,由于靶细胞的不断补充,病毒载量将达到较低的正平衡水平。然而,LLPC 的存在对病毒清除至关重要。
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引用次数: 0
Estimation of spreading speeds and travelling waves for the lattice pioneer-climax competition system. 网格先驱-高潮竞争系统的传播速度和行波估算。
IF 1.8 4区 数学 Q3 ECOLOGY Pub Date : 2024-12-01 Epub Date: 2024-06-11 DOI: 10.1080/17513758.2024.2365792
Haifeng Song, Yuxiang Zhang

This paper concerns the invasion dynamics of the lattice pioneer-climax competition model with parameter regions in which the system is non-monotone. We estimate the spreading speeds and establish appropriate conditions under which the spreading speeds are linearly selected. Moreover, the existence of travelling waves is determined by constructing suitable upper and lower solutions. It shows that the spreading speed coincides with the minimum wave speed of travelling waves if the diffusion rate of the invasive species is larger or equal to that of the native species. Our results are new to estimate the spreading speed of non-monotone lattice pioneer-climax systems, and the techniques developed in this work can be used to study the invasion dynamics of the pioneer-climax system with interaction delays, which could extend the results in the literature. The analysis replies on the construction of auxiliary systems, upper and lower solutions, and the monotone dynamical system approach.

本文涉及网格先驱-高潮竞争模型的入侵动力学,在该模型中,系统的参数区域是非单调的。我们估计了传播速度,并建立了传播速度线性选择的适当条件。此外,我们还通过构建合适的上解和下解确定了行波的存在。结果表明,如果入侵物种的扩散速度大于或等于本地物种的扩散速度,则扩散速度与行波的最小波速重合。我们的结果是估计非单调晶格先驱-高潮系统扩散速度的新方法,本文所发展的技术可用于研究有相互作用延迟的先驱-高潮系统的入侵动力学,这可以扩展文献中的结果。分析依赖于辅助系统的构建、上解和下解以及单调动力系统方法。
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引用次数: 0
Improving adherence to a daily PrEP regimen is key when considering long-time partnerships. 在考虑长期合作伙伴关系时,提高对每日 PrEP 方案的依从性是关键所在。
IF 1.8 4区 数学 Q3 ECOLOGY Pub Date : 2024-12-01 Epub Date: 2024-08-20 DOI: 10.1080/17513758.2024.2390843
S J Gutowska, K A Hoffman, K F Gurski

A population model of HIV that includes susceptible individuals not taking the pre-exposure prophylaxis (PrEP), susceptible individuals taking daily PrEP, and infected individuals is developed for casual partnerships, as well as monogamous and non-monogamous long-term partnerships. Reflecting the reality of prescription availability and usage in the U.S., the PrEP taking susceptible population is a mix of individuals designated by the CDC as high and low risk for acquiring HIV. The rate of infection for non-monogamous long-term partnerships with differential susceptibility is challenging to calculate and requires Markov chain theory to represent the movement between susceptible populations before infection. The parameters associated with PrEP initiation, suspension and adherence impact both the reproduction number of the model and the elasticity indices of the reproduction model. A multi-parameter analysis reveals that increasing adherence has the largest effect on decreasing the number of new infections.

针对临时伴侣关系以及一夫一妻制和非一夫一妻制的长期伴侣关系,建立了一个艾滋病毒人群模型,其中包括未服用暴露前预防疗法(PrEP)的易感人群、每天服用 PrEP 的易感人群和感染人群。服用 PrEP 的易感人群是疾病预防控制中心指定的感染艾滋病毒高风险和低风险人群的混合体,这反映了美国处方供应和使用的现实情况。计算具有不同易感性的非一夫一妻制长期伴侣的感染率具有挑战性,需要用马尔科夫链理论来表示感染前易感人群之间的移动。与 PrEP 的启动、暂停和坚持相关的参数会影响模型的重现次数和重现模型的弹性指数。多参数分析表明,提高坚持率对减少新感染人数的影响最大。
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引用次数: 0
The dynamics of tuberculosis transmission model with different genders. 不同性别的结核病传播动态模型。
IF 1.8 4区 数学 Q3 ECOLOGY Pub Date : 2024-12-01 Epub Date: 2024-09-06 DOI: 10.1080/17513758.2024.2394665
Si Wang, Hui Cao

The dynamics of tuberculosis transmission model with different genders are to be established and studied. The basic regeneration numbers R0=RF+RM are to be defined, where RF and RM to be the basic reproduction number of tuberculosis transmission in female and male populations, respectively. The existence and global stability of the disease-free equilibrium was discussed when R0<1. The global dynamic behaviours of the corresponding limit system under some conditions are to be provided, including the existence, uniqueness, and global stability of the disease-free equilibrium and endemic equilibrium. The numerical simulation shows that the endemic equilibrium may be unique and stable when R0>1, and the system will undergo Hopf bifurcation based on some parameter values. Finally, we applied this model to analyse the transmission of tuberculosis in China, estimated the incidence of tuberculosis in China in 2035, and gave the conclusion that controlling the incidence of tuberculosis in male populations could better reduce the incidence of tuberculosis in China.

建立并研究不同性别的结核病传播动态模型。定义基本再生数 R0=RF+RM,其中 RF 和 RM 分别为结核病在雌性和雄性种群中传播的基本再生数。当 R01 时,讨论了无病平衡的存在性和全局稳定性。提供了相应极限系统在某些条件下的全局动力学行为,包括无病平衡和地方病平衡的存在性、唯一性和全局稳定性。数值模拟结果表明,当 R0>1 时,地方病平衡可能是唯一和稳定的,并且系统会根据某些参数值发生霍普夫分岔。最后,我们应用该模型分析了中国结核病的传播情况,估计了 2035 年中国结核病的发病率,并给出了控制男性人群结核病发病率可以更好地降低中国结核病发病率的结论。
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引用次数: 0
Dynamics of a non-autonomous delay mosquito population suppression model with Wolbachia-infected male mosquitoes. 沃尔巴克氏体感染雄蚊非自主延迟种群抑制模型的动力学研究。
IF 1.8 4区 数学 Q3 ECOLOGY Pub Date : 2024-12-01 Epub Date: 2024-12-04 DOI: 10.1080/17513758.2024.2437034
Yufeng Wang, Jianshe Yu

In this paper, we develop a non-autonomous delay differential equation model for mosquito population suppression. After establishing the positiveness and boundedness of the solutions, we study the dynamical behaviours of the model with or without Wolbachia-infected male mosquitoes. More specifically, for the model without infected male mosquitoes, we analyse the asymptotic stability of the equilibria and demonstrate that the model undergo Hopf bifurcations under certain conditions. For the model incorporating infected male mosquitoes, we derive sufficient conditions for the global asymptotic stability of the origin. Numerical examples are provided to illustrate and support our theoretical findings.

本文建立了蚊子种群抑制的非自治时滞微分方程模型。在建立了解的正性和有界性之后,我们研究了感染沃尔巴克氏体或不感染沃尔巴克氏体的雄蚊模型的动力学行为。更具体地说,对于不感染雄蚊的模型,我们分析了平衡点的渐近稳定性,并证明了模型在一定条件下发生Hopf分岔。对于包含受感染雄蚊的模型,我们得到了原点全局渐近稳定的充分条件。数值例子说明和支持我们的理论发现。
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引用次数: 0
Optimal control of a multi-scale HIV-opioid model. 多尺度 HIV-opioid 模型的优化控制。
IF 1.8 4区 数学 Q3 ECOLOGY Pub Date : 2024-12-01 Epub Date: 2024-02-18 DOI: 10.1080/17513758.2024.2317245
Eric Numfor, Necibe Tuncer, Maia Martcheva

In this study, we apply optimal control theory to an immuno-epidemiological model of HIV and opioid epidemics. For the multi-scale model, we used four controls: treating the opioid use, reducing HIV risk behaviour among opioid users, entry inhibiting antiviral therapy, and antiviral therapy which blocks the viral production. Two population-level controls are combined with two within-host-level controls. We prove the existence and uniqueness of an optimal control quadruple. Comparing the two population-level controls, we find that reducing the HIV risk of opioid users has a stronger impact on the population who is both HIV-infected and opioid-dependent than treating the opioid disorder. The within-host-level antiviral treatment has an effect not only on the co-affected population but also on the HIV-only infected population. Our findings suggest that the most effective strategy for managing the HIV and opioid epidemics is combining all controls at both within-host and between-host scales.

在本研究中,我们将最优控制理论应用于艾滋病毒和阿片类药物流行的免疫流行病学模型。在多尺度模型中,我们使用了四种控制方法:治疗阿片类药物的使用、减少阿片类药物使用者的艾滋病风险行为、抑制进入的抗病毒疗法以及阻止病毒产生的抗病毒疗法。两个人群层面的控制与两个宿主内部层面的控制相结合。我们证明了最优控制四元的存在性和唯一性。通过比较两种人群层面的控制措施,我们发现降低阿片类药物使用者感染艾滋病毒的风险比治疗阿片类药物紊乱对同时感染艾滋病毒和阿片类药物依赖人群的影响更大。宿主水平内的抗病毒治疗不仅对共同受影响的人群有影响,而且对仅感染艾滋病毒的人群也有影响。我们的研究结果表明,管理艾滋病毒和阿片类药物流行病的最有效策略是在宿主内部和宿主之间将所有控制措施结合起来。
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引用次数: 0
A stochastic multi-host model for West Nile virus transmission. 西尼罗河病毒传播的多宿主随机模型。
IF 1.8 4区 数学 Q3 ECOLOGY Pub Date : 2024-12-01 Epub Date: 2023-12-28 DOI: 10.1080/17513758.2023.2293780
Emily B Horton, Suzanne L Robertson

When initially introduced into a susceptible population, a disease may die out or result in a major outbreak. We present a Continuous-Time Markov Chain model for enzootic WNV transmission between two avian host species and a single vector, and use multitype branching process theory to determine the probability of disease extinction based upon the type of infected individual initially introducing the disease into the population - an exposed vector, infectious vector, or infectious host of either species. We explore how the likelihood of disease extinction depends on the ability of each host species to transmit WNV, vector biting rates on host species, and the relative abundance of host species, as well as vector abundance. Theoretical predictions are compared to the outcome of stochastic simulations. We find the community composition of hosts and vectors, as well as the means of disease introduction, can greatly affect the probability of disease extinction.

一种疾病最初传入易感人群时,可能会消亡或导致大规模爆发。我们提出了一个连续时间马尔可夫链模型,该模型适用于两种禽类宿主与单一载体之间的WNV传播,并利用多类型分支过程理论,根据最初将疾病引入种群的感染个体类型(暴露载体、传染性载体或任一物种的传染性宿主)来确定疾病灭绝的概率。我们探讨了疾病灭绝的可能性如何取决于每个宿主物种传播 WNV 的能力、病媒对宿主物种的叮咬率、宿主物种的相对丰度以及病媒丰度。理论预测结果与随机模拟结果进行了比较。我们发现,宿主和病媒的群落组成以及疾病传入的途径会极大地影响疾病灭绝的概率。
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引用次数: 0
Investigating the impact of vaccine hesitancy on an emerging infectious disease: a mathematical and numerical analysis. 调查疫苗犹豫不决对新发传染病的影响:数学和数值分析。
IF 1.8 4区 数学 Q3 ECOLOGY Pub Date : 2024-12-01 Epub Date: 2024-01-04 DOI: 10.1080/17513758.2023.2298988
Indunil M Hewage, Kevin E M Church, Elissa J Schwartz

Throughout the last two centuries, vaccines have been helpful in mitigating numerous epidemic diseases. However, vaccine hesitancy has been identified as a substantial obstacle in healthcare management. We examined the epidemiological dynamics of an emerging infection under vaccination using an SVEIR model with differential morbidity. We mathematically analyzed the model, derived R0, and provided a complete analysis of the bifurcation at R0=1. Sensitivity analysis and numerical simulations were used to quantify the tradeoffs between vaccine efficacy and vaccine hesitancy on reducing the disease burden. Our results indicated that if the percentage of the population hesitant about taking the vaccine is 10%, then a vaccine with 94% efficacy is required to reduce the peak of infections by 40%. If 60% of the population is reluctant about being vaccinated, then even a perfect vaccine will not be able to reduce the peak of infections by 40%.

在过去的两个世纪中,疫苗在缓解众多流行病方面发挥了重要作用。然而,疫苗犹豫不决已被认为是医疗保健管理中的一大障碍。我们使用具有不同发病率的 SVEIR 模型研究了疫苗接种下新发传染病的流行动态。我们对模型进行了数学分析,得出了 R0,并对 R0=1 时的分岔进行了完整分析。我们利用敏感性分析和数值模拟来量化疫苗效力和疫苗犹豫不决对减少疾病负担的权衡。我们的结果表明,如果对接种疫苗犹豫不决的人口比例为 10%,那么需要 94% 效力的疫苗才能将感染峰值降低 40%。如果 60% 的人口不愿意接种疫苗,那么即使是完美的疫苗也无法将感染高峰降低 40%。
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引用次数: 0
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Journal of Biological Dynamics
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