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Decadal soil warming decreased vascular plant above and belowground production in a subarctic grassland by inducing nitrogen limitation 几十年的土壤变暖通过诱导氮限制降低了亚北极草原地下和地上维管植物的产量
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-08-07 DOI: 10.1111/nph.19177
Chao Fang, Niel Verbrigghe, Bjarni D. Sigurdsson, Ivika Ostonen, Niki I. W. Leblans, Sara Mara?ón-Jiménez, Lucia Fuchslueger, Páll Siguresson, Kathiravan Meeran, Miguel Portillo-Estrada, Erik Verbruggen, Andreas Richter, Jordi Sardans, Josep Pe?uelas, Michael Bahn, Sara Vicca, Ivan A. Janssens

  • Below and aboveground vegetation dynamics are crucial in understanding how climate warming may affect terrestrial ecosystem carbon cycling. In contrast to aboveground biomass, the response of belowground biomass to long-term warming has been poorly studied.
  • Here, we characterized the impacts of decadal geothermal warming at two levels (on average +3.3°C and +7.9°C) on below and aboveground plant biomass stocks and production in a subarctic grassland.
  • Soil warming did not change standing root biomass and even decreased fine root production and reduced aboveground biomass and production. Decadal soil warming also did not significantly alter the root–shoot ratio. The linear stepwise regression model suggested that following 10 yr of soil warming, temperature was no longer the direct driver of these responses, but losses of soil N were. Soil N losses, due to warming-induced decreases in organic matter and water retention capacity, were identified as key driver of the decreased above and belowground production. The reduction in fine root production was accompanied by thinner roots with increased specific root area.
  • These results indicate that after a decade of soil warming, plant productivity in the studied subarctic grassland was affected by soil warming mainly by the reduction in soil N.
地下和地上植被动态对于理解气候变暖如何影响陆地生态系统碳循环至关重要。与地上生物量相比,地下生物量对长期变暖的反应研究较少。在这里,我们描述了两个水平(平均+3.3°C和+7.9°C)的十年期地热变暖对亚北极草原地上和地下植物生物量储量和产量的影响。土壤变暖不会改变立根生物量,甚至会降低细根产量,降低地上生物量和产量。几十年的土壤变暖也没有显著改变根冠比。线性逐步回归模型表明 随着土壤变暖,温度不再是这些反应的直接驱动因素,但土壤氮的损失是。由于气候变暖导致有机质和保水能力下降,土壤氮损失被认为是地上和地下产量下降的关键驱动因素。细根产量的减少伴随着比根面积增加的细根。这些结果表明,经过十年的土壤变暖,所研究的亚北极草原的植物生产力受到土壤变暖的影响,主要是土壤氮的减少。
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引用次数: 0
Uncovering the secrets to vibrant flowers: the role of carotenoid esters and their interaction with plastoglobules in plant pigmentation 揭示充满活力的花朵的秘密:类胡萝卜素酯在植物色素沉着中的作用及其与质体红蛋白的相互作用
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-08-07 DOI: 10.1111/nph.19185
Jacinta L. Watkins

Carotenoids, once biosynthesised, participate in a range of processes within plants including serving as precursors for the biosynthesis of multiple hormones, acting as signalling molecules and apocarotenoid aroma compounds, as well as playing roles in the stabilisation of photosystems and acting as antioxidants. These functions contribute to a high turnover rate of carotenoids within leaves (Beisel et al., 2010). Another facet of carotenoids is in attracting insects and animals to facilitate successful reproduction and seed dispersal due to their vibrant colours and presence in fruits and flowers. However, this process relies upon their stable storage in the plastids of non-photosynthetic tissue. The quantity and composition of carotenoids is highly species and variety specific, but generally, the total carotenoid content correlates to the colour intensity in these organs. The esterification of xanthophylls (oxygenated carotenoids) to fatty acids positively influences total carotenoid accumulation by enhancing their packaging into specialised structures within plastids, called plastoglobules. Esterification also likely protects xanthophylls from catabolism through steric hindrance of enzymes that catalyse carotenoid cleavage, such as the carotenoid cleavage dioxygenases and the 9-cis-epoxycarotenoid dioxygenases, although this remains to be demonstrated. Despite the positive influence on total carotenoid accumulation, we are only beginning to understand the molecular mechanisms involved in xanthophyll ester production.

Using a comprehensive set of experiments, Li et al. unravel the genetic basis of esterification in rapeseed flowers. Through a combination of map-based cloning, loss-of-function studies using CRISPR/Cas9 technology and genetic complementation, two homologous genes from the esterase/lipase/thioesterase (ELT) family of acyltransferases were identified that function redundantly to direct petal colour formation and are annotated as xanthophyll esterases. The authors used liquid chromatography coupled with UV/vis spectroscopy and high-resolution mass spectroscopy to identify individual xanthophyll ester species, an undertaking which is notoriously difficult (Mercadante et al., 2017). Interestingly, in white petals of both a naturally occurring cultivar and the xanthophyll esterase double knockout line, pcs, not only are esterified xanthophylls absent, but total carotenoid content is greatly reduced, signifying that in addition to biosynthesis, the stable storage and protection of carotenoids from turnover is required to produce the vivid yellow petal phenotype. The authors further probed the metabolome and transcriptome of the xanthophyll esterase double mutant line pcs and discovered that in the white petals of the mutant, metabolic flux is redirected to lipid metabolism and storage. They also observed no change in the expression of carotenoid biosynthesis ge

类胡萝卜素一旦被生物合成,就会参与植物的一系列过程,包括作为多种激素生物合成的前体,作为信号分子和类胡萝卜素香气化合物,以及在光系统的稳定和抗氧化剂中发挥作用。这些功能有助于叶片内类胡萝卜素的高周转率(Beisel等人,2010)。类胡萝卜素的另一个方面是吸引昆虫和动物,促进成功繁殖和种子传播,因为它们的鲜艳颜色和存在于水果和花朵中。然而,这一过程依赖于它们在非光合组织质体中的稳定储存。类胡萝卜素的数量和组成具有高度的物种和品种特异性,但总的来说,类胡萝卜素的总含量与这些器官的颜色强度有关。叶黄素(含氧类胡萝卜素)酯化成脂肪酸对类胡萝卜素总量的积累有积极的影响,其途径是增强类胡萝卜素在质体(称为质体红蛋白)内的特殊结构中的包装。酯化也可能通过抑制催化类胡萝卜素裂解的酶(如类胡萝卜素裂解双加氧酶和9-顺式环氧类胡萝卜素双加氧酶)的空间位阻来保护叶黄素不受分解代谢的影响,尽管这还有待证实。尽管对总类胡萝卜素积累有积极的影响,但我们才刚刚开始了解叶黄素酯产生的分子机制。Li等人通过一套全面的实验,揭示了油菜花酯化的遗传基础。通过图谱克隆、使用CRISPR/Cas9技术的功能缺失研究和基因互补,从酯酶/脂肪酶/硫酯酶(ELT)酰基转移酶家族中鉴定出两个同源基因,它们在指导花瓣颜色形成方面具有冗余功能,并被注释为叶黄素酯酶。作者使用液相色谱法结合紫外/可见光谱法和高分辨率质谱法来鉴定单个叶黄素酯物种,这是一项众所周知的困难的工作(Mercadante et al., 2017)。有趣的是,在自然产生的品种和叶黄素酯酶双敲除系的白色花瓣中,pcs不仅没有酯化的叶黄素,而且总类胡萝卜素含量也大大降低,这表明除了生物合成外,还需要稳定的储存和保护类胡萝卜素不被转化,以产生鲜艳的黄色花瓣表型。作者进一步研究了叶黄素酯酶双突变系pcs的代谢组和转录组,发现在突变体白色花瓣中,代谢通量重定向到脂质代谢和储存。他们还观察到类胡萝卜素生物合成基因的表达没有变化,但几种脂氧合酶(LOX)基因以及类胡萝卜素裂解双加氧酶1 (CCD1)酶的表达上调,这可能参与了类胡萝卜素的腐烂,并进一步加剧了白色花瓣的表型。在叶绿体向染色质过渡的过程中,质体经历了广泛的重塑,包括类囊体膜的分解,以及被称为质体红蛋白的特殊类胡萝卜素储存结构的增殖。塑料微球由中性脂质的核心组成,周围是一层蛋白点缀的磷脂单层,纤维蛋白在外壳中起着至关重要的结构作用(Rottet et al., 2015;图1)质体红蛋白存在于多种类型的质体(色体、叶绿体、黄体)中,在这些质体中,它们承载着特定的代谢功能,以响应发育线索,如开花和衰老,以及各种应激,如强光或氮饥饿(van Wijk &;凯斯勒,2017)。在染色质中,质体红蛋白的核心通过类囊体和质体包膜的新生生物合成和再活化来积累类胡萝卜素。因此,Li等人使用了一种反向遗传方法,利用CRISPR/Cas9技术敲除单个原纤维蛋白候选蛋白,从而鉴定出FBN1b对塑料红蛋白的形成至关重要。与叶黄素酯酶双突变系pcs类似,fbn1b编辑敲除系也呈现白色的花色,虽然它确实产生少量的叶黄素酯,但总叶黄素含量大大降低。鉴于废除叶黄素酯化和质体红蛋白形成都会导致白色花瓣表型,那么这些过程如何影响花瓣发育和衰老过程中叶绿体向染色质转变过程中超微结构重组的问题就产生了。Li等人。 通过对黄色花瓣(野生型)和白色花瓣叶黄素酯酶和fbn1b基因敲除系在发育过程中进行透射电子显微镜观察,解决了这些问题。Li等人观察到,叶黄素酯酶双突变系个体在各时间点的质体红蛋白大小和数量均显著减少,而fbn1b突变体不能产生质体红蛋白,而是产生较大的油体状结构。在花瓣发育后期,当花瓣开始脱水和枯萎时,黄色花瓣的色质体保持完整,而在叶黄素酯酶和fbn1b中,白色花瓣系的质体膜都显示出明显的损伤,每个细胞的质体数量也明显减少。作者推测,这可能是由于活性氧(ROS)积累引发的细胞衰老,这是由白色花瓣中较高水平的单线态氧所支持的。综上所述,Li等人的实验指出了黄色花瓣着色的综合模型,该模型受叶黄素酯化和质体红蛋白形成的共同调节。叶黄素的酯化可以增强色素的积累和包装成质体红蛋白,而质体红蛋白反过来只能通过FBN1b蛋白的功能拷贝来支持外壳形成(图1)。如果没有FBN1b蛋白并因此形成质体红蛋白,游离和酯化的叶黄素的积累程度大大降低,并且更容易受到CCD1和LOX等降解酶的影响,这两种酶在白花中都是上调的。随着FBN1b的功能拷贝和适当的质体红蛋白形成,总叶黄素积累的增强也提供了更大的抗氧化能力,从而减弱了细胞中有害ROS的积累。这反过来又保护了质体红膜免受破坏,并限制了叶黄素泄漏到细胞环境中,在细胞环境中,叶黄素将暴露于参与其分解的酶中。Li等人的研究结果表明,油菜籽花瓣中的叶黄素酯酶属于ELT酰基转移酶家族。这与之前鉴定的从小麦籽粒中提取的叶黄素酰基转移酶(Watkins等人,2019)形成对比,该酶是从Gly-Asp-Ser-Leu酯酶/脂肪酶家族中提取的,对叶黄素和脂肪酸底物表现出不同的偏好。这表明叶黄素酯化在植物中至少独立进化了两次。酯化反应在微藻中具有重要商业价值的类酮胡萝卜素虾青素的积累中也起着重要作用(Chen et al., 2015)。虾青素作为天然着色剂和功能性成分用于膳食补充剂、化妆品和食品中。虽然已知纤维蛋白家族在藻类和蓝藻中是保守的(van Wijk &;Kessler, 2017),叶黄素酯化的遗传机制仍然未知,但可能为提出有关类胡萝卜素积累和储存的进化问题提供工具。尽管在了解花组织和谷物中的叶黄素酯化反应方面取得了重大进展,但其他重要植物组织如水果(如香蕉、橙子、木瓜和辣椒)和块茎(如土豆)的酯化机制仍然未知。这些作物的可食用果肉的颜色在不同的品种之间差异很大,是影响消费者偏好的重要品质性状。土豆和香蕉是世界上最重要的主要作物之一,为全世界数百万人提供了大量的热量摄入。在土豆中,黄色是由叶黄素赋予的,其酯化与叶黄素的积累直接相关(Fernandez-Orozco et al., 2013)。对这些植物的酯化反应的研究可能会为育种或基因编辑计划提供更多的靶标。此外,橙子、木瓜和辣椒含有类似于油菜花的色质体,而马铃薯块茎和香蕉果肉含有类似于小麦谷物的含淀粉淀粉质体。进一步的研究还可以探索不同质体类型的叶黄素酯化和储存机制是否存在差异。
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引用次数: 0
Reducing eggs on eggplant: a common naturally emitted plant volatile could replace insecticides in the ‘king of vegetables’ 减少茄子上的鸡蛋:一种常见的自然排放的植物挥发性物质可以取代“蔬菜之王”中的杀虫剂
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-08-07 DOI: 10.1111/nph.19172
Kelsey J. R. P. Byers

The development of insecticidal chemicals (commonly termed pesticides) has revolutionized the process of cultivation in agriculture; yet, similarly to the development of antimicrobial resistance in pathogens, insects can rapidly develop resistance to these chemicals (Alyokhin & Chen, 2017). Pesticides can also negatively affect beneficial insects such as pollinators and natural enemies of herbivorous insects (Bourguet & Guillemaud, 2016). Extensive pesticide use also poses risks to farmers and growers who apply the pesticides, as well as consumers who eat the resulting produce (Del Prado-Lu, 2015; Bourguet & Guillemaud, 2016). Additionally, pesticides are not always cheap, increasing the economic burden on farmers and consumers alike (Bourguet & Guillemaud, 2016). As a result, alternative strategies are needed to control major crop pests whose damage affects yield and crop quality. A key component of integrated pest management (IPM) is the identification of extant crop varieties carrying resistance phenotypes against pest insects (Stenberg, 2017), in particular, the identification of varieties or lines that emit deterrent volatile organic compounds (VOCs), which can stop pest insects at the source by preventing physical contact, oviposition, and feeding on vulnerable crops. However, rather than killing the insects once a plant is infested, or in the early stages of infestation, why not just keep the insects from infesting in the first place? An exciting study by Ghosh et al., published in this issue of New Phytologist (2023, 1259–1274) identifies a variety of eggplant (aubergine/brinjal) (Solanum melongena L., Solanaceae) resistant to the eggplant/brinjal shoot and fruit borer (Lucinodes orbonalis Guenée, Lepidoptera: Pyralidae), which infests both the vegetative and fruit tissues of the plant (Fig. 1).

This eggplant variety, which originates in the eastern Himalaya region, shows nearly complete resistance to infestation by the adult moth of L. orbonalis, with a complete lack of infested fruits and shoots, and very limited presence of moth eggs on the leaves of the plant – the moth's usual oviposition site. The identification of a naturally resistant variety of eggplant is exciting news, as the pest moth is found world-wide and can cause the loss of 45–100% of marketable fruit (Reshma et al., 2019). As a result of this heavy infestation and loss potential, eggplant receives some of the heaviest pesticide burdens of any cultivated species, with plants sprayed up to 20 times per month in some locations (Del Prado-Lu, 2015). The presence of these pesticides affects not only the moths, but also potentially beneficial insects such as pollinators and parasitoid wasps. Eggplant is largely self-pollinated but benefits from pollination for seed set and fruit production (Pess

杀虫剂(通常称为杀虫剂)的开发彻底改变了农业种植过程;然而,与病原体中抗微生物耐药性的发展类似,昆虫可以迅速对这些化学物质产生耐药性(Alyokhin&amp;Chen,2017)。农药也会对有益昆虫产生负面影响,如传粉昆虫和草食性昆虫的天敌(Bourguet&amp;Guillemaud,2016)。广泛使用农药也会给使用农药的农民和种植者以及食用由此产生的农产品的消费者带来风险(Del Prado Lu,2015;Bourguet和Guillemaud,2016)。此外,杀虫剂并不总是便宜的,这增加了农民和消费者的经济负担(Bourguet&amp;Guillemaud,2016)。因此,需要采取替代策略来控制主要作物害虫,因为这些害虫的危害会影响产量和作物质量。害虫综合治理(IPM)的一个关键组成部分是识别具有对害虫抗性表型的现存作物品种(Stenberg,2017),特别是识别释放威慑性挥发性有机化合物(VOCs)的品种或品系,该化合物可以通过防止物理接触、产卵、,以脆弱的作物为食。然而,与其在植物被感染后或在感染的早期阶段杀死昆虫,为什么不从一开始就防止昆虫感染呢?Ghosh等人的一项令人兴奋的研究。,发表在本期《新植物学家》(2023,1259–1274)上的研究鉴定了一种茄子(茄子/茄子)(茄科,茄科)对茄子/茄子芽和果实蛀虫(露西nodes orbenistor Guenée,鳞翅目:梨科)具有抗性,这种蛀虫侵扰植物的营养组织和果实组织(图1),原产于喜马拉雅东部地区,对L.orbaniste成虫的侵扰表现出几乎完全的抵抗力,完全没有被侵扰的果实和枝条,蛾卵在植物叶片上的存在非常有限——蛾通常的产卵场所。一种具有天然抗性的茄子品种的鉴定是一个令人兴奋的消息,因为这种害虫蛾在世界各地都有发现,并可能导致45-100%的可销售水果损失(Reshma et al.,2019)。由于这种严重的虫害和损失潜力,茄子受到的农药负担是所有栽培物种中最重的,在一些地方,植物每月喷洒20次(Del Prado Lu,2015)。这些杀虫剂的存在不仅影响蛾类,还影响潜在的有益昆虫,如传粉昆虫和寄生蜂。茄子在很大程度上是自花授粉的,但从授粉中受益于结实和果实生产(Pessarakli&amp;Dris,2004)。由于杀虫剂漂移到邻近作物和未开垦的自然区域,传粉昆虫和其他有益昆虫也可能受到大量喷洒的影响。然而,虽然鉴定单一抗性品种是茄子作物IPM向前迈出的关键一步,但了解对蛾类的抗性机制,甚至可能确定保护其他具有类似虫害风险的作物的方法,是下一步的关键。Ghosh等人。在他们的研究中详细阐述了这一点。作者选择了七个茄子品种,包括抗性品系和六个流行的印度栽培品种,并在田间条件下测试了它们对蛾类及其毛虫幼虫产卵和伤害的易感性。这些测试确定品种RC-RL-22(以下简称RL22)是一个异常品种,与六个流行品种相比,产卵非常有限,没有发现损伤。使用固相微萃取(SPME)和气相色谱-质谱联用(GC–MS),作者共鉴定了7个品种中释放的21种叶挥发物,主要是苯类和脂肪酸衍生(FAD)化合物。它们鉴定的挥发物包括常见的化合物,如香叶醇、(Z)-3-己烯-1-醇、苯乙醛和水杨酸甲酯,其中一些已被证明在草食性昆虫的寄主选择中发挥作用(Theis,2006;Knauer和Schiestl,2017)。有趣的是,品种RL22与其他选择的品种具有完全不同的叶片挥发性特征,除了排放其他品种中不存在的常见单萜醇香叶醇外,还显示出苯类化合物的排放减少和FADs水平的高度增加。接下来,作者使用真实植物和人工植物在受控环境中测试了蛾类的偏好。人工植物补充了各自品种叶挥发物的二氯甲烷提取物,以证明叶挥发物排放的作用,而不是纹理或视觉线索在吸引蛾类和产卵中的作用。 回顾现场研究,RL22在两次试验中都不适合雌蛾产卵,表明其产卵水平与不添加挥发物的人工植物相当。在鉴定了RL22中的七种关键挥发物后,作者评估了它们在使用人工植物驱动蛾产卵行为中的个体作用。在这七种挥发物中,只有香叶醇对产卵有影响,严重减少了蛾在人工植物上的产卵。当其他六个(非RL22)易感品种的叶片补充香叶醇时,产卵量再次显著下降,表明单独的香叶醇足以驱动产卵排斥行为。尽管香叶醇先前已被证明是一种天然杀菌剂(Chen et al.,2023)和杀虫剂(Reis et al.,2016),表现出许多其他生物效应(Chen&amp;Viljoen,2010),但在这种情况下,它的作用更早,可以强烈阻止产卵,防止虫害和损害。在这一阶段对香叶醇的鉴定表明,它可以用于IPM,将其喷洒在田间流行的易感品种的叶片上很可能会减少产卵和损害。然而,作者更进一步,确定了RL22植物中香叶醇排放的遗传基础。利用与已知牵牛属的序列相似性 × 作者在茄子中鉴定了一种推定的香叶醇合酶(SmGS),并在异源系统中表达,证明它足以催化香叶焦磷酸(GPP,常见的单萜类前体)转化为香叶醇。在植物中,通过优雅的靶向特异性病毒诱导的基因沉默(VIGS)证实了SmGS对于RL22产生香叶醇是必要的。使用VIGS植物和野生型对照对雌蛾进行的行为分析表明,通过沉默SmGS,RL22中香叶醇的损失强烈影响了蛾的行为和产卵,与野生型RL22相比,98%的卵产在沉默的植物上。用香叶醇补充沉默的植物至正常的RL22水平恢复了它们的排斥性。SmGS及其在体外和植株中的功能的鉴定不仅为茄子品种的香叶醇合酶功能的遗传筛选铺平了道路,而且为其他作物物种的选择性育种或基因编辑开辟了一条前进的道路,香叶醇可能在阻止昆虫产卵和破坏方面发挥作用。未来,育种家可以简单地筛选叶片挥发性排放物中是否存在香叶醇,并将其作为筛选品种抗性表型的“第一道关”,而不是依靠昂贵而耗时的田间试验来确定茄子的抗性品种。作者没有对SmGS在其他茄子品种中的功能进行测序和确定,这似乎是未来开发和评估抗虫品种的下一步。确定RL22生产香叶醇是否具有脱靶效应也将是一件有趣的事情,例如影响传粉昆虫的造访、天敌的吸引或影响茄子的果实风味。如果没有,这将香叶醇定位为理想的生物威慑害虫蛾类及其幼虫的侵扰。这项工作还应激励未来在鉴定和将天然抗性品种纳入农业方面的工作,并作为如何在田间和受控条件下鉴定负责抗性的植物次生代谢产物及其遗传基础的模板。总之,作者确定了香叶醇,一种在至少31个植物科中发现的常见单萜类化合物(Schiestl,2010),以及一种由所有陆地植物中发现的一种常见前体的一个步骤催化的化合物,作为茄子中一种严重害虫的产卵威慑物。这代表着在茄子和其他重要作物物种的IPM方面迈出了令人兴奋的一步。它为研究常见的植物挥发物如何阻止害虫物种,以及它们在吸引传粉昆虫方面更为人所知的作用打开了新的大门。此外,由于香叶醇通常是传统农药的更安全的替代品,并且可以很容易地通过细菌表达系统在体外生产,因此将香叶醇应用于无抗性品种代表着在农业及其他领域以可持续的方式利用植物天然产物的潜在进步。与依赖具有显著脱靶作用的传统杀虫剂不同,发现了一种对地上部和果部蛀虫具有天然抗性的茄子,以及其抗性的化学和遗传基础,为IPM提供了一条前进的道路。 通过
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引用次数: 0
Intronic microRNA-directed regulation of mitochondrial reactive oxygen species enhances plant stress tolerance in Arabidopsis 内含子microRNA对线粒体活性氧的调控增强拟南芥的植物抗逆性
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-08-07 DOI: 10.1111/nph.19168
Wei-Bo Xu, Lei Zhao, Peng Liu, Qian-Huan Guo, Chang-Ai Wu, Guo-Dong Yang, Jin-Guang Huang, Shu-Xin Zhang, Xing-Qi Guo, Shi-Zhong Zhang, Cheng-Chao Zheng, Kang Yan

  • MicroRNAs (miRNAs) play crucial roles in regulating plant development and stress responses. However, the functions and mechanism of intronic miRNAs in plants are poorly understood.
  • This study reports a stress-responsive RNA splicing mechanism for intronic miR400 production, whereby miR400 modulates reactive oxygen species (ROS) accumulation and improves plant tolerance by downregulating its target expression.
  • To monitor the intron splicing events, we used an intronic miR400 splicing-dependent luciferase transgenic line. Luciferase activity was observed to decrease after high cadmium concentration treatment due to the retention of the miR400-containing intron, which inhibited the production of mature miR400. Furthermore, we demonstrated that under Cd treatments, Pentatricopeptide Repeat Protein 1 (PPR1), the target of miR400, acts as a positive regulator by inducing ROS accumulation. Ppr1 mutation affected the Complex III activity in the electron transport chain and RNA editing of the mitochondrial gene ccmB.
  • This study illustrates intron splicing as a key step in intronic miR400 production and highlights the function of intronic miRNAs as a ‘signal transducer’ in enhancing plant stress tolerance.
微小RNA(miRNA)在调节植物发育和应激反应中发挥着至关重要的作用。然而,内含子miRNA在植物中的功能和机制尚不清楚。本研究报道了内含子miR400产生的应激反应性RNA剪接机制,miR400通过下调其靶表达来调节活性氧(ROS)的积累并提高植物耐受性。为了监测内含子剪接事件,我们使用了一个内含子miR400剪接依赖性萤光素酶转基因系。在高镉浓度处理后,由于含有miR400的内含子的保留,观察到萤光素酶活性降低,这抑制了成熟miR400的产生。此外,我们证明,在镉处理下,miR400的靶点五肽重复蛋白1(PPR1)通过诱导ROS积累发挥正调控作用。Ppr1突变影响线粒体基因ccmB的电子传输链中的复合体III活性和RNA编辑。这项研究表明,内含子剪接是内含子miR400产生的关键步骤,并强调了内含子miRNA作为“信号转导子”在增强植物抗逆性中的作用。
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引用次数: 1
Argonaute7 (AGO7) optimizes arbuscular mycorrhizal fungal associations and enhances competitive growth in Nicotiana attenuata Argonaute7 (AGO7) 可优化旱烟草的丛枝菌根真菌关联并增强其竞争性生长
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-08-02 DOI: 10.1111/nph.19155
Maitree Pradhan, Ian T. Baldwin, Shree P. Pandey

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引用次数: 1
A rapid method for assembly of single chromosome and identification of sex determination region based on single-chromosome sequencing 一种基于单染色体测序的单染色体快速组装及性别决定区鉴定方法
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-08-02 DOI: 10.1111/nph.19176
Ning Li, Jian Zhou, Wanqing Zhang, Wenjia Liu, Bingxin Wang, Hongbing She, Ameer Ahmed Mirbahar, Shufen Li, Yulan Zhang, Wujun Gao, Wei Qian, Chuanliang Deng
The sex-determining-region (SDR) may offer the best prospects for studying sex-determining gene, recombination suppression, and chromosome heteromorphism. However, current progress of SDR identification and cloning showed following shortcomings: large near-isogenic lines need to be constructed, and a relatively large population is needed; the cost of whole-genome sequencing and assembly is high. Herein, the X/Y chromosomes of Spinacia oleracea L. subsp. turkestanica were successfully microdissected and assembled using single-chromosome sequencing. The assembly length of X and Y chromosome is c. 192.1 and 195.2 Mb, respectively. Three large inversions existed between X and Y chromosome. The SDR size of X and Y chromosome is c. 13.2 and 24.1 Mb, respectively. MSY region and six male-biased genes were identified. A Y-chromosome-specific marker in SDR was constructed and used to verify the chromosome assembly quality at cytological level via fluorescence in situ hybridization. Meanwhile, it was observed that the SDR located on long arm of Y chromosome and near the centromere. Overall, a technical system was successfully established for rapid cloning the SDR and it is also applicable to rapid assembly of specific chromosome in other plants. Furthermore, this study laid a foundation for studying the molecular mechanism of sex chromosome evolution in spinach.
性别决定区(SDR)可能为研究性别决定基因、重组抑制和染色体异型性提供了最好的前景。然而,目前SDR鉴定和克隆的进展存在以下不足:需要构建大型近等基因系,需要相对较大的群体;全基因组测序和组装的成本很高。本文对菠菜(Spinacia oleracea L.subsp。利用单染色体测序成功地对火鸡进行了显微切割和组装。X和Y染色体的装配长度分别为约192.1和195.2 Mb。X和Y染色体之间存在三个大的倒位。X和Y染色体的SDR大小分别为c.13.2和24.1 Mb。MSY区和6个偏向男性的基因。构建了SDR中的Y染色体特异性标记,并通过荧光原位杂交在细胞学水平上验证染色体组装质量。同时观察到SDR位于Y染色体长臂上,着丝粒附近。总体而言,成功建立了快速克隆SDR的技术体系,该技术体系也适用于其他植物中特定染色体的快速组装。本研究为进一步研究菠菜性染色体进化的分子机制奠定了基础。
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引用次数: 0
NCR343 is required to maintain the viability of differentiated bacteroids in nodule cells in Medicago truncatula 需要NCR343来维持树干苜蓿根瘤细胞中分化的类杆菌的生存能力
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-08-02 DOI: 10.1111/nph.19180
Fengzhan Gao, Jian Yang, Niu Zhai, Chao Zhang, Xinru Ren, Yating Zeng, Yuhui Chen, Rujin Chen, Huairong Pan

  • Bacteroid (name for rhizobia inside nodule cells) differentiation is a prerequisite for successful nitrogen-fixing symbiosis. In certain legumes, under the regulation of host proteins, for example, a large group of NCR (nodule cysteine rich) peptides, bacteroids undergo irreversible terminal differentiation. This process causes them to lose the ability to propagate inside nodule cells while boosting their competency for nitrogen fixation. How host cells maintain the viability of differentiated bacteroids while maximizing their nitrogen-reducing activities remains elusive.
  • Here, through mutant screen, map-based cloning, and genetic complementation, we find that NCR343 is required for the viability of differentiated bacteroids. In Medicago truncatula debino1 mutant, differentiated bacteroids decay prematurely, and NCR343 is proved to be the casual gene for debino1.
  • NCR343 is mainly expressed in the nodule fixation zone, where bacteroids are differentiated. In nodule cells, mature NCR343 peptide is secreted into the symbiosomes. RNA-Seq assay shows that many stress-responsive genes are significantly induced in debino1 bacteroids. Additionally, a group of stress response-related rhizobium proteins are identified as putative interacting partners of NCR343.
  • In summary, our findings demonstrate that beyond promoting bacteroid differentiation, NCR peptides are also required in maintaining the viability of differentiated bacteroids.
拟杆菌(根瘤细胞内根瘤菌的名称)分化是成功固氮共生的先决条件。在某些豆类中,在宿主蛋白的调节下,例如一大群NCR(富含结节半胱氨酸)肽,类杆菌发生不可逆的末端分化。这一过程导致它们失去在结节细胞内繁殖的能力,同时提高了它们的固氮能力。宿主细胞如何在最大限度地提高其氮还原活性的同时保持分化的类杆菌的生存能力仍然难以捉摸。在这里,通过突变体筛选、基于图谱的克隆和遗传互补,我们发现NCR343是分化类杆菌生存能力所必需的。在Medicago truncatula debino1突变体中,分化的类杆菌过早腐烂,NCR343被证明是debino1的偶然基因。NCR343主要在结节固定区表达,在那里类杆菌分化。在结节细胞中,成熟的NCR343肽被分泌到共生体中。RNA-Seq分析显示,许多应激反应基因在debino1类杆菌中被显著诱导。此外,一组与应激反应相关的根瘤菌蛋白被鉴定为NCR343的假定相互作用伙伴。总之,我们的研究结果表明,除了促进类杆菌分化外,NCR肽也是维持分化类杆菌生存能力所必需的。
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引用次数: 2
The power of patterns: new insights into pattern-triggered immunity 模式的力量:对模式触发免疫的新见解
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-07-31 DOI: 10.1111/nph.19148
Lin-Jie Shu, Parvinderdeep S. Kahlon, Stefanie Ranf

The plant immune system features numerous immune receptors localized on the cell surface to monitor the apoplastic space for danger signals from a broad range of plant colonizers. Recent discoveries shed light on the enormous complexity of molecular signals sensed by these receptors, how they are generated and removed to maintain cellular homeostasis and immunocompetence, and how they are shaped by host-imposed evolutionary constraints. Fine-tuning receptor sensing mechanisms at the molecular, cellular and physiological level is critical for maintaining a robust but adaptive host barrier to commensal, pathogenic, and symbiotic colonizers alike. These receptors are at the core of any plant-colonizer interaction and hold great potential for engineering disease resistance and harnessing beneficial microbiota to keep crops healthy.

植物免疫系统的特点是定位在细胞表面的许多免疫受体,以监测细胞外基质空间中来自广泛植物定植体的危险信号。最近的发现揭示了这些受体感知的分子信号的巨大复杂性,它们是如何产生和去除以维持细胞稳态和免疫活性的,以及它们是如何被宿主施加的进化限制所塑造的。在分子、细胞和生理水平上微调受体传感机制对于维持对共生、致病和共生定植体的强大但适应性的宿主屏障至关重要。这些受体是任何植物-定植体相互作用的核心,在工程抗病性和利用有益微生物群保持作物健康方面具有巨大潜力。
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引用次数: 2
Recent advances in plant endomembrane research and new microscopical techniques 植物膜研究的新进展及新的显微技术
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-07-28 DOI: 10.1111/nph.19134
Yonglun Zeng, Zizhen Liang, Zhiqi Liu, Baiying Li, Yong Cui, Caiji Gao, Jinbo Shen, Xiangfeng Wang, Qiong Zhao, Xiaohong Zhuang, Philipp S. Erdmann, Kam-Bo Wong, Liwen Jiang

The endomembrane system consists of various membrane-bound organelles including the endoplasmic reticulum (ER), Golgi apparatus, trans-Golgi network (TGN), endosomes, and the lysosome/vacuole. Membrane trafficking between distinct compartments is mainly achieved by vesicular transport. As the endomembrane compartments and the machineries regulating the membrane trafficking are largely conserved across all eukaryotes, our current knowledge on organelle biogenesis and endomembrane trafficking in plants has mainly been shaped by corresponding studies in mammals and yeast. However, unique perspectives have emerged from plant cell biology research through the characterization of plant-specific regulators as well as the development and application of the state-of-the-art microscopical techniques. In this review, we summarize our current knowledge on the plant endomembrane system, with a focus on several distinct pathways: ER-to-Golgi transport, protein sorting at the TGN, endosomal sorting on multivesicular bodies, vacuolar trafficking/vacuole biogenesis, and the autophagy pathway. We also give an update on advanced imaging techniques for the plant cell biology research.

内膜系统由各种膜结合细胞器组成,包括内质网(ER)、高尔基体、反式高尔基网络(TGN)、内体和溶酶体/液泡。不同腔室之间的膜运输主要通过囊泡运输实现。由于所有真核生物的膜室和调节膜运输的机制在很大程度上是保守的,我们目前对植物细胞器生物发生和膜运输的认识主要是通过对哺乳动物和酵母的相应研究形成的。然而,通过植物特异性调节因子的表征以及最先进的显微技术的发展和应用,植物细胞生物学研究出现了独特的视角。在这篇综述中,我们总结了我们目前对植物膜系统的了解,重点介绍了几种不同的途径:内质网到高尔基体的转运、TGN的蛋白质分选、多泡体的内体分选、液泡运输/液泡生物发生以及自噬途径。对植物细胞生物学研究的先进成像技术进行了综述。
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引用次数: 0
Molecular perspectives on age-related resistance of plants to (viral) pathogens 植物对(病毒)病原体年龄相关抗性的分子观点
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-07-28 DOI: 10.1111/nph.19131
April DeMell, Veria Alvarado, Herman B. Scholthof

Age-related resistance to microbe invasion is a commonly accepted concept in plant pathology. However, the impact of such age-dependent interactive phenomena is perhaps not yet sufficiently recognized by the broader plant science community. Toward cataloging an understanding of underlying mechanisms, this review explores recent molecular studies and their relevance to the concept. Examples describe differences in genetic background, transcriptomics, hormonal balances, protein-mediated events, and the contribution by short RNA-controlled gene silencing events. Throughout, recent findings with viral systems are highlighted as an illustration of the complexity of the interactions. It will become apparent that instead of uncovering a unifying explanation, we unveiled only trends. Nevertheless, with a degree of confidence, we propose that the process of plant age-related defenses is actively regulated at multiple levels. The overarching goal of this control for plants is to avoid a constitutive waste of resources, especially at crucial metabolically draining early developmental stages.

与年龄相关的对微生物入侵的抗性是植物病理学中普遍接受的概念。然而,这种与年龄相关的相互作用现象的影响可能尚未被更广泛的植物科学界充分认识到。为了对潜在机制的理解进行编目,本文综述了最近的分子研究及其与这一概念的相关性。例子描述了遗传背景、转录组学、激素平衡、蛋白质介导事件以及短rna控制的基因沉默事件的差异。在整个过程中,最近对病毒系统的发现被强调为相互作用复杂性的例证。很明显,我们没有揭示一个统一的解释,而只是揭示了趋势。然而,有一定程度的信心,我们提出植物年龄相关防御过程在多个水平上受到积极调节。这种控制对植物的总体目标是避免资源的构成浪费,特别是在关键的代谢消耗的早期发育阶段。
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引用次数: 0
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