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Gene correction and overexpression of TNNI3 improve impaired relaxation in engineered heart tissue model of pediatric restrictive cardiomyopathy 基因校正和过表达 TNNI3 可改善小儿局限性心肌病工程心脏组织模型中受损的松弛功能。
IF 2.5 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-01-09 DOI: 10.1111/dgd.12909
Moyu Hasegawa, Kenji Miki, Takuji Kawamura, Ikue Takei Sasozaki, Yuki Higashiyama, Masaru Tsuchida, Kunio Kashino, Masaki Taira, Emiko Ito, Maki Takeda, Hidekazu Ishida, Shuichiro Higo, Yasushi Sakata, Shigeru Miyagawa

Research on cardiomyopathy models using engineered heart tissue (EHT) created from disease-specific induced pluripotent stem cells (iPSCs) is advancing rapidly. However, the study of restrictive cardiomyopathy (RCM), a rare and intractable cardiomyopathy, remains at the experimental stage because there is currently no established method to replicate the hallmark phenotype of RCM, particularly diastolic dysfunction, in vitro. In this study, we generated iPSCs from a patient with early childhood-onset RCM harboring the TNNI3 R170W mutation (R170W-iPSCs). The properties of R170W-iPSC-derived cardiomyocytes (CMs) and EHTs were evaluated and compared with an isogenic iPSC line in which the mutation was corrected. Our results indicated altered calcium kinetics in R170W-iPSC-CMs, including prolonged tau, and an increased ratio of relaxation force to contractile force in R170W-EHTs. These properties were reversed in the isogenic line, suggesting that our model recapitulates impaired relaxation of RCM, i.e., diastolic dysfunction in clinical practice. Furthermore, overexpression of wild-type TNNI3 in R170W-iPSC-CMs and -EHTs effectively rescued impaired relaxation. These results highlight the potential efficacy of EHT, a modality that can accurately recapitulate diastolic dysfunction in vitro, to elucidate the pathophysiology of RCM, as well as the possible benefits of gene therapies for patients with RCM.

利用疾病特异性诱导多能干细胞(iPSCs)制作的工程心脏组织(EHT)建立心肌病模型的研究进展迅速。然而,对限制性心肌病(RCM)这种罕见的难治性心肌病的研究仍处于实验阶段,因为目前还没有成熟的方法在体外复制 RCM 的标志性表型,尤其是舒张功能障碍。在本研究中,我们从一名携带 TNNI3 R170W 突变的早幼粒细胞型 RCM 患者身上获得了 iPSCs(R170W-iPSCs)。我们评估了 R170W-iPSC 衍生的心肌细胞(CM)和 EHT 的特性,并将其与纠正了突变的同源 iPSC 株进行了比较。我们的结果表明,R170W-iPSC-CMs 的钙动力学发生了改变,包括 tau 时间延长,以及 R170W-EHTs 的松弛力与收缩力比率增加。这些特性在同源系中被逆转,这表明我们的模型再现了 RCM 松弛功能受损的情况,即临床实践中的舒张功能障碍。此外,在 R170W-iPSC-CMs 和 -EHTs 中过表达野生型 TNNI3 能有效修复受损的松弛功能。这些结果凸显了 EHT(一种能在体外准确再现舒张功能障碍的模式)在阐明 RCM 病理生理学方面的潜在功效,以及基因疗法对 RCM 患者可能带来的益处。
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引用次数: 0
Regulation of progenitor cell survival by a novel chromatin remodeling factor during neural tube development 一种新的染色质重塑因子在神经管发育过程中对祖细胞存活的调控。
IF 2.5 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2023-11-28 DOI: 10.1111/dgd.12905
Noriaki Sasai, Shogo Tada, Jumi Ohshiro, Chikara Kogiso, Takuma Shinozuka

During development, progenitor cell survival is essential for proper tissue functions, but the underlying mechanisms are not fully understood. Here we show that ERCC6L2, a member of the Snf2 family of helicase-like proteins, plays an essential role in the survival of developing chick neural cells. ERCC6L2 expression is induced by the Sonic Hedgehog (Shh) signaling molecule by a mechanism similar to that of the known Shh target genes Ptch1 and Gli1. ERCC6L2 blocks programmed cell death induced by Shh inhibition and this inhibition is independent of neural tube patterning. ERCC6L2 knockdown by siRNA resulted in the aberrant appearance of apoptotic cells. Furthermore, ERCC6L2 cooperates with the Shh signal and plays an essential role in the induction of the anti-apoptotic factor Bcl-2. Taken together, ERCC6L2 acts as a key factor in ensuring the survival of neural progenitor cells.

在发育过程中,祖细胞的存活对正常的组织功能至关重要,但其潜在机制尚不完全清楚。本研究表明,作为Snf2解旋酶样蛋白家族的一员,ERCC6L2在发育中的小鸡神经细胞的存活中起着至关重要的作用。ERCC6L2的表达是由Sonic Hedgehog (Shh)信号分子诱导的,其机制类似于已知的Shh靶基因Ptch1和Gli1。ERCC6L2挽救Shh抑制诱导的程序性细胞死亡,这种抑制与神经管模式无关。通过siRNA抑制ERCC6L2的表达导致凋亡细胞的畸变外观。此外,ERCC6L2与Shh信号协同作用,在诱导抗凋亡因子Bcl-2中发挥重要作用。综上所述,ERCC6L2是确保神经祖细胞存活的关键因素。这篇文章受版权保护。版权所有。
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引用次数: 0
Modeling familial and sporadic Parkinson's disease in small fishes 模拟小鱼的家族性和散发性帕金森病。
IF 2.5 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2023-11-22 DOI: 10.1111/dgd.12904
Tomoyuki Yamanaka, Hideaki Matsui

The establishment of animal models for Parkinson's disease (PD) has been challenging. Nevertheless, once established, they will serve as valuable tools for elucidating the causes and pathogenesis of PD, as well as for developing new strategies for its treatment. Following the recent discovery of a series of PD causative genes in familial cases, teleost fishes, including zebrafish and medaka, have often been used to establish genetic PD models because of their ease of breeding and gene manipulation, as well as the high conservation of gene orthologs. Some of the fish lines can recapitulate PD phenotypes, which are often more pronounced than those in rodent genetic models. In addition, a new experimental teleost fish, turquoise killifish, can be used as a sporadic PD model, because it spontaneously manifests age-dependent PD phenotypes. Several PD fish models have already made significant contributions to the discovery of novel PD pathological features, such as cytosolic leakage of mitochondrial DNA and pathogenic phosphorylation in α-synuclein. Therefore, utilizing various PD fish models with distinct degenerative phenotypes will be an effective strategy for identifying emerging facets of PD pathogenesis and therapeutic modalities.

帕金森病(PD)动物模型的建立一直具有挑战性。然而,一旦建立,它们将成为阐明PD的病因和发病机制以及制定新的治疗策略的有价值的工具。由于最近在家族病例中发现了一系列PD致病基因,包括斑马鱼和medaka在内的硬骨鱼由于易于育种和基因操作,以及基因同源物的高度保守性,经常被用来建立遗传PD模型。一些鱼线可以概括PD表型,这往往比在啮齿动物遗传模型中更为明显。此外,一种新的实验硬骨鱼,绿松石鳉鱼,可以作为散发性PD模型,因为它自发地表现出年龄依赖性PD表型。一些PD鱼模型已经为发现新的PD病理特征做出了重大贡献,例如线粒体DNA的细胞质渗漏和α-突触核蛋白的致病性磷酸化。因此,利用具有不同退行性表型的各种PD鱼模型将是识别PD发病机制和治疗方式新方面的有效策略。这篇文章受版权保护。版权所有。
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引用次数: 0
Combinatorial genetic strategies for dissecting cell lineages, cell types, and gene function in the mouse brain 在小鼠脑中解剖细胞系、细胞类型和基因功能的组合遗传策略。
IF 2.5 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2023-11-14 DOI: 10.1111/dgd.12902
Qi Zhang, Xue Liu, Ling Gong, Miao He

Research in neuroscience has greatly benefited from the development of genetic approaches that enable lineage tracing, cell type targeting, and conditional gene regulation. Recent advances in combinatorial strategies, which integrate multiple cellular features, have significantly enhanced the spatiotemporal precision and flexibility of these manipulations. In this minireview, we introduce the concept and design of these strategies and provide a few examples of their application in genetic fate mapping, cell type targeting, and reversible conditional gene regulation. These advancements have facilitated in-depth investigation into the developmental principles underlying the assembly of brain circuits, granting experimental access to highly specific cell lineages and subtypes, as well as offering valuable new tools for modeling and studying neurological diseases. Additionally, we discuss future directions aimed at expanding and improving the existing genetic toolkit for a better understanding of the development, structure, and function of healthy and diseased brains.

神经科学的研究很大程度上得益于遗传方法的发展,这些方法使谱系追踪、细胞类型靶向和条件基因调控成为可能。结合多种细胞特征的组合策略的最新进展显著提高了这些操作的时空精度和灵活性。在这篇综述中,我们介绍了这些策略的概念和设计,并提供了它们在遗传命运定位、细胞类型靶向和可逆条件基因调控方面的应用实例。这些进步促进了对脑回路组装背后的发育原理的深入研究,为高度特异性的细胞谱系和亚型提供了实验途径,并为建模和研究神经系统疾病提供了有价值的新工具。此外,我们讨论了未来的方向,旨在扩大和改进现有的遗传工具,以更好地了解健康和患病大脑的发育、结构和功能。这篇文章受版权保护。版权所有。
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引用次数: 0
Distribution of XTdrd6/Xtr protein during oogenesis and early development in Xenopus laevis: Zygotic translation begins only in germ cells that have entered the genital ridge XTdrd6/Xtr蛋白在非洲爪蟾卵子发生和早期发育过程中的分布:合子翻译仅在进入生殖嵴的生殖细胞中开始。
IF 2.5 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2023-11-09 DOI: 10.1111/dgd.12899
Tetsuharu Sugimoto, Chihiro Kanayama, Masateru Hiyoshi, Daisuke Kosumi, Kazufumi Takamune

We previously identified Xenopus tudor domain containing 6/Xenopus tudor repeat (Xtdrd6/Xtr), which was exclusively expressed in the germ cells of adult Xenopus laevis. Western blot analysis showed that the XTdrd6/Xtr protein was translated in St. I/II oocytes and persisted as a maternal factor until the tailbud stage. XTdrd6/Xtr has been reported to be essential for the translation of maternal mRNA involved in oocyte meiosis. In the present study, we examined the distribution of the XTdrd6/Xtr protein during oogenesis and early development, to predict the time point of its action during development. First, we showed that XTdrd6/Xtr is localized to germinal granules in the germplasm by electron microscopy. XTdrd6/Xtr was found to be localized to the origin of the germplasm, the mitochondrial cloud of St. I oocytes, during oogenesis. Notably, XTdrd6/Xtr was also found to be localized around the nuclear membrane of St. I oocytes. This suggests that XTdrd6/Xtr may immediately interact with some mRNAs that emerge from the nucleus and translocate to the mitochondrial cloud. XTdrd6/Xtr was also detected in primordial germ cells and germ cells throughout development. Using transgenic Xenopus expressing XTdrd6/Xtr with a C-terminal FLAG tag produced by homology-directed repair, we found that the zygotic translation of the XTdrd6/Xtr protein began at St. 47/48. As germ cells are surrounded by gonadal somatic cells and are considered to enter a new differentiation stage at this phase, the newly synthesized XTdrd6/Xtr protein may regulate the translation of mRNAs involved in the new steps of germ cell differentiation.

我们之前鉴定了一个包含6/爪蟾tudor重复序列(Xtdrd6/Xtr)的爪蟾tutor结构域,该结构域仅在成年爪蟾的生殖细胞中表达。Western印迹显示XTdrd6/Xtr蛋白在St.I/II卵母细胞中被翻译,并作为母体因子持续到尾芽期。据报道,XTdrd6/Xtr对参与卵母细胞减数分裂的母体mRNA的翻译至关重要。在本研究中,我们检测了XTdrd6/Xtr蛋白在卵子发生和早期发育过程中的分布,以预测其在发育过程中作用的时间点。首先,我们使用电子显微镜显示XTdrd6/Xtr定位于种质中的生发颗粒。XTdrd6/Xtr被发现在卵子发生过程中定位于种质的来源,即St.I卵母细胞的线粒体云。值得注意的是,XTdrd6/Xtr也被发现定位在St.I卵母细胞的核膜周围。这表明XTdrd6/Xtr可能立即与一些从细胞核中出现的mRNA相互作用,并转移到线粒体云中。在整个发育过程中,在原始生殖细胞(PGCs)和生殖细胞中也检测到XTdrd6/Xtr。使用在Xtdrd6/Xtr处用FLAG标签标记的转基因爪蟾,使用同源定向修复,我们发现Xtdrd6/Xtr蛋白的合子翻译始于St.47/48。由于生殖细胞被性腺体细胞包围,并被认为在该阶段进入了新的分化阶段,新合成的XTdrd6/Xtr蛋白可能调节参与生殖细胞分化新步骤的mRNA的翻译。这篇文章受版权保护。保留所有权利。
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引用次数: 0
Identification of ancestral gnathostome Gli3 enhancers with activity in mammals 哺乳动物中具有活性的祖先颚体Gli3增强子的鉴定。
IF 2.5 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2023-11-04 DOI: 10.1111/dgd.12901
Shahid Ali, Muhammad Abrar, Irfan Hussain, Fatima Batool, Rabail Zehra Raza, Hizran Khatoon, Matteo Zoia, Axel Visel, Neil H. Shubin, Marco Osterwalder, Amir Ali Abbasi

Abnormal expression of the transcriptional regulator and hedgehog (Hh) signaling pathway effector Gli3 is known to trigger congenital disease, most frequently affecting the central nervous system (CNS) and the limbs. Accurate delineation of the genomic cis-regulatory landscape controlling Gli3 transcription during embryonic development is critical for the interpretation of noncoding variants associated with congenital defects. Here, we employed a comparative genomic analysis on fish species with a slow rate of molecular evolution to identify seven previously unknown conserved noncoding elements (CNEs) in Gli3 intronic intervals (CNE15–21). Transgenic assays in zebrafish revealed that most of these elements drive activities in Gli3 expressing tissues, predominantly the fins, CNS, and the heart. Intersection of these CNEs with human disease associated SNPs identified CNE15 as a putative mammalian craniofacial enhancer, with conserved activity in vertebrates and potentially affected by mutation associated with human craniofacial morphology. Finally, comparative functional dissection of an appendage-specific CNE conserved in slowly evolving fish (elephant shark), but not in teleost (CNE14/hs1586) indicates co-option of limb specificity from other tissues prior to the divergence of amniotes and lobe-finned fish. These results uncover a novel subset of intronic Gli3 enhancers that arose in the common ancestor of gnathostomes and whose sequence components were likely gradually modified in other species during the process of evolutionary diversification.

已知转录调节因子和刺猬(Hh)信号通路效应器Gli3的异常表达会引发先天性疾病,最常见的是影响中枢神经系统(CNS)和四肢。准确描述胚胎发育过程中控制Gli3转录的基因组顺式调控格局对于解释与先天性缺陷相关的非编码变体至关重要。在这里,我们对分子进化速度较慢的鱼类物种进行了比较基因组分析,以确定Gli3内含子区间(CNE15-21)中7个以前未知的保守非编码元件(CNE)。对斑马鱼的转基因分析显示,这些元素中的大多数驱动表达Gli3的组织的活性,主要是鳍、中枢神经系统和心脏。这些CNE与人类疾病相关SNPs的交叉鉴定出CNE15是一种公认的哺乳动物颅面增强子,在脊椎动物中具有保守的活性,并可能受到与人类颅面形态相关的突变的影响。最后,对在缓慢进化的鱼类(象鲨)中保守但在硬骨鱼中不保守的附肢特异性CNE(CNE14/hs1586)进行比较功能解剖表明,在羊膜和叶鳍鱼类分化之前,肢体特异性与其他组织的共同选择。这些结果揭示了一个新的内含子Gli3增强子亚群,该亚群出现在颚体的共同祖先中,其序列成分可能在进化多样化的过程中在其他物种中逐渐被修饰。这篇文章受版权保护。保留所有权利。
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引用次数: 0
Adult neurogenesis research in China 中国成人神经发生研究。
IF 2.5 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2023-10-29 DOI: 10.1111/dgd.12900
Xing Luo, Mingyue Xu, Weixiang Guo

Neural stem cells are multipotent stem cells that generate functional newborn neurons through a process called neurogenesis. Neurogenesis in the adult brain is tightly regulated and plays a pivotal role in the maintenance of brain function. Disruption of adult neurogenesis impairs cognitive function and is correlated with numerous neurologic disorders. Deciphering the mechanisms underlying adult neurogenesis not only advances our understanding of how the brain functions, but also offers new insight into neurologic diseases and potentially contributes to the development of effective treatments. The field of adult neurogenesis is experiencing significant growth in China. Chinese researchers have demonstrated a multitude of factors governing adult neurogenesis and revealed the underlying mechanisms of and correlations between adult neurogenesis and neurologic disorders. Here, we provide an overview of recent advancements in the field of adult neurogenesis due to Chinese scientists.

神经干细胞(NSCs)是一种多能干细胞,通过一个称为神经发生的过程产生功能性新生神经元。成人大脑的神经发生受到严格调控,在维持大脑功能方面发挥着关键作用。成人神经发生中断会损害认知功能,并与许多神经系统疾病有关。解读成人神经发生的机制不仅促进了我们对大脑功能的理解,还为神经疾病提供了新的见解,并可能有助于开发有效的治疗方法。成人神经发生领域在中国正经历着显著的发展。中国研究人员已经证明了控制成人神经发生的多种因素,并揭示了成人神经发生与神经系统疾病之间的相关性和潜在机制。在这里,我们概述了中国科学家在成人神经发生领域的最新进展。这篇文章受版权保护。保留所有权利。
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引用次数: 0
Versatile utilities of amphibians (part 5) 两栖动物的多种用途(第5部分)。
IF 2.5 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2023-10-25 DOI: 10.1111/dgd.12889
Haruki Ochi, Takashi Kato, Aaron Zorn, Toshinori Hayashi, Takeshi Inoue, Mariko Kondo, Masanori Taira, Tatsuo Michiue
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引用次数: 0
Understanding disorders of the human nervous system: How fish models reveal disease mechanisms from single molecules to behavior (part 1) 理解人类神经系统的紊乱:鱼类模型如何揭示从单分子到行为的疾病机制(上)。
IF 2.5 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2023-10-25 DOI: 10.1111/dgd.12894
Christina Lillesaar, William Norton, Daniel Liedtke, Sachiko Tsuda
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引用次数: 0
Genomic variation in neurons 神经元的基因组变异。
IF 2.5 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2023-10-19 DOI: 10.1111/dgd.12898
Sunjidmaa Zolzaya, Ayano Narumoto, Yu Katsuyama

Neurons born during the fetal period have extreme longevity and survive until the death of the individual because the human brain has highly limited tissue regeneration. The brain is comprised of an enormous variety of neurons each exhibiting different morphological and physiological characteristics and recent studies have further reported variations in their genome including chromosomal abnormalities, copy number variations, and single nucleotide mutations. During the early stages of brain development, the increasing number of neurons generated at high speeds has been proposed to lead to chromosomal instability. Additionally, mutations in the neuronal genome can occur in the mature brain. This observed genomic mosaicism in the brain can be produced by multiple endogenous and environmental factors and careful analyses of these observed variations in the neuronal genome remain central for our understanding of the genetic basis of neurological disorders.

胎儿期出生的神经元寿命极长,可以存活到个体死亡,因为人类大脑的组织再生非常有限。大脑由各种各样的神经元组成,每个神经元都表现出不同的形态和生理特征,最近的研究进一步报道了其基因组的变异,包括染色体异常、拷贝数变异和单核苷酸突变。在大脑发育的早期阶段,高速产生的神经元数量的增加被认为会导致染色体不稳定。此外,神经元基因组的突变可能发生在成熟的大脑中。在大脑中观察到的这种基因组镶嵌可能是由多种内源性和环境因素产生的,对神经元基因组中这些观察到的变异的仔细分析仍然是我们理解神经疾病遗传基础的核心。这篇文章受版权保护。保留所有权利。
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引用次数: 0
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Development Growth & Differentiation
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