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Causes, types, etiological agents, prevalence, diagnosis, treatment, prevention, effects on human health and future aspects of bovine mastitis. 牛乳腺炎的原因、类型、病原、流行、诊断、治疗、预防、对人类健康的影响和未来方面。
IF 2.5 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2020-06-01 Epub Date: 2020-02-13 DOI: 10.1017/S1466252319000094
Aqeela Ashraf, Muhammad Imran

Mastitis is among the most common and challenging diseases of dairy animals. It is an inflammation of udder tissues due to physical damage, chemical irritation, or infection caused by certain pathogens. Bovine mastitis has been known for ages, but its complex etiology and multi-factorial nature make it difficult to control. Mastitis may have a negative impact on human health by inducing antibiotic-resistant pathogens that may spread, which is threatening. Researchers are continuously struggling to devise suitable methods for mastitis control. Management strategies are mainly focused on disease prevention by farm management which includes proper hygiene, trained staff to monitor minor changes in the udder or milk, and better diagnostic and treatment methods. New technologies which have the potential to unravel this complicated disease include improved diagnostic tools, based on advanced genomics or proteomics, prevention, based on vaccines and immune modulators, and metabolic products of probiotics such as bacteriocins and gene therapy.

乳腺炎是奶牛最常见和最具挑战性的疾病之一。它是由某些病原体引起的物理损伤、化学刺激或感染引起的乳房组织炎症。牛乳腺炎已为人所知多年,但其复杂的病因和多因素的性质使其难以控制。乳腺炎可能通过诱导可能传播的耐抗生素病原体对人类健康产生负面影响,这是威胁。研究人员一直在努力设计控制乳腺炎的合适方法。管理战略主要侧重于通过农场管理预防疾病,其中包括适当的卫生、训练有素的工作人员监测乳房或乳汁的微小变化,以及更好的诊断和治疗方法。有可能解开这一复杂疾病的新技术包括改进的诊断工具,基于先进的基因组学或蛋白质组学,预防,基于疫苗和免疫调节剂,以及益生菌的代谢产物,如细菌素和基因治疗。
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引用次数: 47
Efficacy of experimental phage therapies in livestock. 实验性噬菌体疗法对家畜的疗效。
IF 2.5 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2020-06-01 Epub Date: 2020-06-19 DOI: 10.1017/S1466252319000161
Marta Dec, Andrzej Wernicki, Renata Urban-Chmiel

Bacteriophages are the most abundant form of life on earth and are present everywhere. The total number of bacteriophages has been estimated to be 1032 virions. The main division of bacteriophages is based on the type of nucleic acid (DNA or RNA) and on the structure of the capsid. Due to the significant increase in the number of multi-drug-resistant bacteria, bacteriophages could be a useful tool as an alternative to antibiotics in experimental therapies to prevent and to control bacterial infections in people and animals. The aim of this review was to discuss the history of phage therapy as a replacement for antibiotics, in response to EU regulations prohibiting the use of antibiotics in livestock, and to present current examples and results of experimental phage treatments in comparison to antibiotics. The use of bacteriophages to control human infections has had a high success rate, especially in mixed infections caused mainly by Staphylococcus, Pseudomonas, Enterobacter, and Enterococcus. Bacteriophages have also proven to be an effective tool in experimental treatments for combating diseases in livestock.

噬菌体是地球上最丰富的生命形式,无处不在。据估计,噬菌体的总数为1032个病毒粒子。噬菌体的主要划分是基于核酸的类型(DNA或RNA)和衣壳的结构。由于多重耐药细菌数量的显著增加,噬菌体可以作为实验性治疗中抗生素的替代品,用于预防和控制人类和动物的细菌感染。这篇综述的目的是讨论噬菌体治疗作为抗生素替代品的历史,以回应欧盟禁止在牲畜中使用抗生素的规定,并介绍目前与抗生素相比实验性噬菌体治疗的例子和结果。利用噬菌体控制人类感染的成功率很高,特别是在主要由葡萄球菌、假单胞菌、肠杆菌和肠球菌引起的混合感染中。噬菌体也被证明是对抗牲畜疾病的实验性治疗的有效工具。
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引用次数: 14
The microbiome of the digestive system of ruminants - a review. 反刍动物消化系统微生物群研究进展。
IF 2.5 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2020-06-01 Epub Date: 2020-01-10 DOI: 10.1017/S1466252319000069
Paulina Cholewińska, Katarzyna Czyż, Piotr Nowakowski, Anna Wyrostek

This review aims to explain the influence and characterization of the microbiome in the ruminant digestive system by presenting the knowledge collected so far. The knowledge presented in this work is focused on the main factors affecting the microbiome and the main dependencies that have been found in it so far. The microbiome in the rumen is the first to come into contact with the biomass of the forage and its main purpose is to decompose into smaller particles or compounds. With the gradual increase in knowledge about the microbiome, there is a chance to manipulate it so that the animal continues to live in a symbiotic relationship with it, while reducing greenhouse gas emissions to the environment as well as increasing feed efficiency. Therefore, understanding the influence of the ruminant microbiome is the main step to achieve such results. However, learning the relationship between microorganisms is only at an early stage, because research focuses mainly on taxonomy. Future research should focus on interactions in the ecosystem which is the microbiome, on explaining individual functions and on influence of environmental factors.

本文旨在通过介绍迄今收集到的知识来解释反刍动物消化系统中微生物组的影响和特征。在这项工作中提出的知识集中在影响微生物组的主要因素和迄今为止在其中发现的主要依赖性。瘤胃中的微生物群首先与牧草的生物量接触,其主要目的是分解成更小的颗粒或化合物。随着对微生物群知识的逐渐增加,有机会操纵它,使动物继续与它生活在共生关系中,同时减少对环境的温室气体排放,提高饲料效率。因此,了解反刍动物微生物组的影响是实现这一结果的主要步骤。然而,了解微生物之间的关系只是在早期阶段,因为研究主要集中在分类学上。未来的研究应集中在生态系统中微生物群的相互作用、个体功能的解释和环境因素的影响上。
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引用次数: 38
Translating 'big data': better understanding of host-pathogen interactions to control bacterial foodborne pathogens in poultry. 翻译“大数据”:更好地了解宿主-病原体相互作用以控制家禽中的细菌性食源性病原体。
IF 2.5 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2020-06-01 Epub Date: 2020-01-07 DOI: 10.1017/S1466252319000124
Loïc Deblais, Dipak Kathayat, Yosra A Helmy, Gary Closs, Gireesh Rajashekara

Recent technological advances has led to the generation, storage, and sharing of colossal sets of information ('big data'), and the expansion of 'omics' in science. To date, genomics/metagenomics, transcriptomics, proteomics, and metabolomics are arguably the most ground breaking approaches in food and public safety. Here we review some of the recent studies of foodborne pathogens (Campylobacter spp., Salmonella spp., and Escherichia coli) in poultry using big data. Genomic/metagenomic approaches have reveal the importance of the gut microbiota in health and disease. They have also been used to identify, monitor, and understand the epidemiology of antibiotic-resistance mechanisms and provide concrete evidence about the role of poultry in human infections. Transcriptomics studies have increased our understanding of the pathophysiology and immunopathology of foodborne pathogens in poultry and have led to the identification of host-resistance mechanisms. Proteomic/metabolomic approaches have aided in identifying biomarkers and the rapid detection of low levels of foodborne pathogens. Overall, 'omics' approaches complement each other and may provide, at least in part, a solution to our current food-safety issues by facilitating the development of new rapid diagnostics, therapeutic drugs, and vaccines to control foodborne pathogens in poultry. However, at this time most 'omics' approaches still remain underutilized due to their high cost and the high level of technical skills required.

最近的技术进步导致了海量信息(“大数据”)的生成、存储和共享,以及“组学”在科学领域的扩展。迄今为止,基因组学/宏基因组学、转录组学、蛋白质组学和代谢组学可以说是食品和公共安全领域最具突破性的方法。本文回顾了近年来利用大数据对家禽食源性致病菌(弯曲杆菌、沙门氏菌和大肠杆菌)的研究进展。基因组学/宏基因组学方法揭示了肠道微生物群在健康和疾病中的重要性。它们还被用于确定、监测和了解抗生素耐药机制的流行病学,并提供有关家禽在人类感染中的作用的具体证据。转录组学研究增加了我们对家禽食源性病原体的病理生理学和免疫病理学的理解,并导致宿主耐药机制的鉴定。蛋白质组学/代谢组学方法有助于识别生物标志物和快速检测低水平食源性病原体。总体而言,“组学”方法相互补充,并可能通过促进新的快速诊断、治疗药物和疫苗的开发来控制家禽食源性病原体,至少在一定程度上解决我们当前的食品安全问题。然而,目前大多数“组学”方法由于其高成本和所需的高水平技术技能而仍未得到充分利用。
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引用次数: 8
Development of a systematic mapping review protocol for the most recent evidence on ruminant infectious disease frequency and disease-associated mortality: Ethiopia as a case study. 为反刍动物传染病频率和疾病相关死亡率的最新证据制定系统绘图审查协议:以埃塞俄比亚为例。
IF 4.3 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2020-06-01 Epub Date: 2020-09-07 DOI: 10.1017/S1466252319000203
Theodora K Tsouloufi, Louise M Donnison, Karen L Smyth, Andrew R Peters

Almost 19% of the GDP of Ethiopia results from livestock production. Ruminants, in particular, form the majority of the national herd and are a critical source of income for smallholder farmers. Infectious diseases have been identified as a major cause of reduced livestock productivity in low- and middle-income countries (LMICs); therefore, a sound and comprehensive understanding of the relevant evidence would be beneficial in order to enable decision making on disease control policies. However, livestock disease data from sub-Saharan Africa is variable and disparate, which poses a challenge for evidence synthesis. This paper describes a protocol for a systematic mapping review of the recent available evidence on ruminant disease prevalence and associated mortality in Ethiopia. Literature sources will be identified using database search strategies. The titles, abstracts and, subsequently, full texts will be screened for inclusion based on predefined eligibility criteria. Specific data will be extracted and a preliminary qualitative assessment of the evidence will be performed using predefined indicators. The planned systematic map will be the first to provide a large-scale overview of the available ruminant disease evidence in Ethiopia; the final output will be an interactive dashboard tool to inform critical stakeholders in policy and research.

埃塞俄比亚近 19% 的国内生产总值来自畜牧业生产。反刍动物尤其占全国畜群的大多数,是小农收入的重要来源。传染病已被确定为导致中低收入国家(LMICs)畜牧业生产率下降的主要原因;因此,对相关证据进行充分和全面的了解将有助于疾病控制政策的决策制定。然而,撒哈拉以南非洲地区的牲畜疾病数据多变且分散,这给证据综合带来了挑战。本文介绍了对埃塞俄比亚反刍动物疾病流行率和相关死亡率的最新可用证据进行系统绘图审查的方案。将使用数据库搜索策略确定文献来源。将根据预先确定的资格标准对标题、摘要以及随后的全文进行筛选。将提取具体数据,并使用预定指标对证据进行初步定性评估。计划中的系统地图将是第一个对埃塞俄比亚现有反刍动物疾病证据进行大规模概述的地图;最终产出将是一个交互式仪表板工具,为政策和研究方面的重要利益相关者提供信息。
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引用次数: 0
Non-antibiotic approaches for disease prevention and control in beef and veal production: a scoping review. 牛肉和小牛肉生产中疾病预防和控制的非抗生素方法:范围综述。
IF 2.5 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2019-12-01 DOI: 10.1017/S1466252319000252
Lee V Wisener, Jan M Sargeant, Annette M O'Connor, Terri L O'Sullivan, Scott A McEwen, Andrea Nwosu, Tanya M Rossi

Livestock producers are encouraged to reduce the use of antibiotics belonging to classes of medical importance to humans. We conducted a scoping review on non-antibiotic interventions in the form of products or management practices that could potentially reduce the need for antibiotics in beef and veal animals living under intensive production conditions. Our objectives were to systematically describe the research on this broad topic, identify specific topics that could feasibly support systematic reviews, and identify knowledge gaps. Multiple databases were searched. Two reviewers independently screened and charted the data. From the 13,598 articles screened, 722 relevant articles were charted. The number of relevant articles increased steadily from 1990. The Western European research was dominated by veal production studies whereas the North American research was dominated by beef production studies. The interventions and outcomes measured were diverse. The four most frequent interventions included non-antibiotic feed additives, vaccinations, breed type, and feed type. The four most frequent outcomes were indices of immunity, non-specific morbidity, respiratory disease, and mortality. There were seven topic areas evaluated in clinical trials that may share enough commonality to support systemic reviews. There was a dearth of studies in which interventions were compared to antibiotic comparison groups.

鼓励牲畜生产者减少使用对人类具有重要医学意义的抗生素。我们对产品或管理实践形式的非抗生素干预措施进行了范围审查,这些措施可能会减少生活在集约化生产条件下的牛肉和小牛肉对抗生素的需求。我们的目标是系统地描述关于这个广泛主题的研究,确定可以支持系统综述的具体主题,并确定知识差距。检索了多个数据库。两位审稿人独立筛选并绘制了数据图表。从筛选的13598篇文章中,722篇相关文章被绘制成图表。自1990年以来,有关文章的数量稳步增加。西欧的研究以小牛肉生产研究为主,而北美的研究以牛肉生产研究为主。测量的干预措施和结果是多种多样的。四种最常见的干预措施包括非抗生素饲料添加剂、疫苗接种、品种类型和饲料类型。四种最常见的结果是免疫指标、非特异性发病率、呼吸系统疾病和死亡率。在临床试验中评估了七个主题领域,它们可能有足够的共性来支持系统评价。缺乏将干预措施与抗生素对照组进行比较的研究。
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引用次数: 3
Quality assessment of systematic reviews and meta-analyses that examine preventive antibiotic uses and management practices designed to prevent disease in livestock. 对检查预防性抗生素使用和旨在预防牲畜疾病的管理做法的系统评价和荟萃分析进行质量评估。
IF 2.5 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2019-12-01 DOI: 10.1017/S146625231900029X
Rachael Vriezen, Jan M Sargeant, Ellen Vriezen, Charlotte B Winder, Annette M O'Connor

To implement effective stewardship in food animal production, it is essential that producers and veterinarians are aware of preventive interventions to reduce illness in livestock. Systematic reviews and meta-analyses (SR/MA) provide transparent, replicable, and quality-assessed overviews. At present, it is unknown how many SR/MA evaluate preventive antibiotic use or management practices aimed at reducing disease risk in animal agriculture. Further, the quality of existing reviews is unknown. Our aim was to identify reviews investigating these topics and to provide an assessment of their quality. Thirty-eight relevant reviews were identified. Quality assessment was based on the AMSTAR 2 framework for the critical appraisal of systematic reviews. The quality of most of the reviews captured was classified as critically low (84.2%, n = 32/38), and only a small percentage of the evaluated reviews did not contain critical weaknesses (7.9%, n = 3/38). Particularly, a small number of reviews reported the development of an a priori protocol (15.8%, n = 6/38), and few reviews stated that key review steps were conducted in duplicate (study selection/screening: 26.3%, n = 10/38; data extraction: 15.8%, n = 6/38). The development of high-quality reviews summarizing evidence on approaches to antibiotic reduction is essential, and thus greater adherence to quality conduct guidelines for synthesis research is crucial.

为了在食用动物生产中实施有效的管理,生产者和兽医必须了解预防干预措施,以减少牲畜的疾病。系统评价和荟萃分析(SR/MA)提供透明、可复制和质量评估的概述。目前,尚不清楚有多少SR/MA评估旨在降低动物农业疾病风险的预防性抗生素使用或管理做法。此外,现有评论的质量是未知的。我们的目的是确定调查这些主题的综述,并对其质量进行评估。确定了38项相关审查。质量评估基于AMSTAR 2框架,用于系统审查的关键评估。捕获的大多数评论的质量被归类为极低(84.2%,n = 32/38),并且只有一小部分被评估的评论不包含关键弱点(7.9%,n = 3/38)。特别是,少数综述报告了先验方案的制定(15.8%,n = 6/38),少数综述指出关键的综述步骤是重复进行的(研究选择/筛选:26.3%,n = 10/38;数据提取率:15.8%,n = 6/38)。开发高质量的综述,总结减少抗生素方法的证据是必不可少的,因此更严格地遵守合成研究的高质量行为准则是至关重要的。
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引用次数: 6
How to read and interpret the results of a Bayesian network meta-analysis: a short tutorial. 如何阅读和解释贝叶斯网络元分析的结果:一个简短的教程。
IF 2.5 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2019-12-01 DOI: 10.1017/S1466252319000343
D Hu, A M O'Connor, C B Winder, J M Sargeant, C Wang

In this manuscript we use realistic data to conduct a network meta-analysis using a Bayesian approach to analysis. The purpose of this manuscript is to explain, in lay terms, how to interpret the output of such an analysis. Many readers are familiar with the forest plot as an approach to presenting the results of a pairwise meta-analysis. However when presented with the results of network meta-analysis, which often does not include the forest plot, the output and results can be difficult to understand. Further, one of the advantages of Bayesian network meta-analyses is in the novel outputs such as treatment rankings and the probability distributions are more commonly presented for network meta-analysis. Our goal here is to provide a tutorial for how to read the outcome of network meta-analysis rather than how to conduct or assess the risk of bias in a network meta-analysis.

在这份手稿中,我们使用现实数据进行网络元分析使用贝叶斯方法来分析。本文的目的是解释,在外行术语,如何解释这种分析的输出。许多读者都熟悉森林图,它是一种展示两两元分析结果的方法。然而,当呈现网络元分析的结果时(通常不包括森林图),输出和结果可能难以理解。此外,贝叶斯网络元分析的优势之一是新颖的输出,如治疗排名和概率分布,更常用于网络元分析。我们的目标是提供一个如何阅读网络meta分析结果的教程,而不是如何在网络meta分析中进行或评估偏倚风险。
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引用次数: 9
A systematic review of the efficacy of antibiotics for the prevention of swine respiratory disease. 抗生素预防猪呼吸道疾病疗效的系统综述。
IF 2.5 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2019-12-01 DOI: 10.1017/S1466252319000185
Jan M Sargeant, Michele D Bergevin, Katheryn Churchill, Kaitlyn Dawkins, Bhumika Deb, Jennifer Dunn, Dapeng Hu, Carly Moody, Annette M O'Connor, Terri L O'Sullivan, Mark Reist, Chong Wang, Barbara Wilhelm, Charlotte B Winder

Prevention and control of respiratory disease is a major contributor to antibiotic use in swine. A systematic review was conducted to address the question, 'What is the comparative efficacy of antimicrobials for the prevention of swine respiratory disease?' Eligible studies were controlled trials published in English evaluating prophylactic antibiotics in swine, where clinical morbidity, mortality, or total antibiotic use was assessed. Four databases and the gray literature were searched for relevant articles. Two reviewers working independently screened titles and abstracts for eligibility followed by full-text articles, and then extracted data and evaluated risk of bias for eligible trials. There were 44 eligible trials from 36 publications. Clinical morbidity was evaluated in eight trials where antibiotics were used in nursery pigs and 10 trials where antibiotics were used in grower pigs. Mortality was measured in 22 trials in nursery pigs and 12 trials in grower pigs. There was heterogeneity in the antibiotic interventions and comparisons published in the literature; thus, there was insufficient evidence to allow quantification of the efficacy, or relative efficacy, of antibiotic interventions. Concerns related to statistical non-independence and quality of reporting were noted in the included trials.

预防和控制呼吸道疾病是猪使用抗生素的主要原因。我们进行了一项系统综述,以解决“抗菌剂在预防猪呼吸道疾病方面的相对功效是什么?”符合条件的研究是用英文发表的对照试验,评估猪的预防性抗生素,评估临床发病率、死亡率或抗生素总使用情况。在四个数据库和灰色文献中检索相关文章。两位审稿人独立地筛选标题和摘要,然后是全文文章,然后提取数据并评估符合条件的试验的偏倚风险。来自36份出版物的44项符合条件的试验。对苗圃猪使用抗生素的8个试验和生长猪使用抗生素的10个试验进行了临床发病率评估。在22个苗圃猪试验和12个生长猪试验中测量了死亡率。在抗生素干预和文献发表的比较中存在异质性;因此,没有足够的证据来量化抗生素干预的有效性或相对有效性。在纳入的试验中注意到与统计不独立性和报告质量有关的问题。
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引用次数: 14
A systematic review and network meta-analysis of bacterial and viral vaccines, administered at or near arrival at the feedlot, for control of bovine respiratory disease in beef cattle. 在饲养场或接近饲养场时施用细菌和病毒疫苗以控制肉牛呼吸道疾病的系统评价和网络荟萃分析。
IF 2.5 2区 农林科学 Q1 VETERINARY SCIENCES Pub Date : 2019-12-01 DOI: 10.1017/S1466252319000288
A M O'Connor, D Hu, S C Totton, N Scott, C B Winder, B Wang, C Wang, J Glanville, H Wood, B White, R Larson, C Waldner, J M Sargeant

Vaccination against putative causal organisms is a frequently used and preferred approach to controlling bovine respiratory disease complex (BRD) because it reduces the need for antibiotic use. Because approximately 90% of feedlots use and 90% of beef cattle receive vaccines in the USA, information about their comparative efficacy would be useful for selecting a vaccine. We conducted a systematic review and network meta-analysis of studies assessing the comparative efficacy of vaccines to control BRD when administered to beef cattle at or near their arrival at the feedlot. We searched MEDLINE, MEDLINE In-Process, MEDLINE Daily Epub Ahead of Print, AGRICOLA, Cambridge Agricultural and Biological Index, Science Citation Index, and Conference Proceedings Citation Index - Science and hand-searched the conference proceedings of the American Association of Bovine Practitioners and World Buiatrics Congress. We found 53 studies that reported BRD morbidity within 45 days of feedlot arrival. The largest connected network of studies, which involved 17 vaccine protocols from 14 studies, was included in the meta-analysis. Consistent with previous reviews, we found little compelling evidence that vaccines used at or near arrival at the feedlot reduce the incidence of BRD diagnosis.

针对假定的致病生物的疫苗接种是控制牛呼吸道疾病复合体(BRD)的常用和首选方法,因为它减少了对抗生素使用的需求。因为在美国大约90%的饲养场使用疫苗,90%的肉牛接种疫苗,所以关于它们的相对效力的信息将有助于选择疫苗。我们对研究进行了系统回顾和网络荟萃分析,评估了在肉牛到达饲养场时或接近饲养场时接种疫苗控制BRD的比较效果。我们检索了MEDLINE、MEDLINE In-Process、MEDLINE Daily Epub Ahead of Print、AGRICOLA、Cambridge Agricultural and Biological Index、Science引文索引和Conference Proceedings引文索引- Science,并手工检索了美国牛从业者协会和世界兽医学大会的会议记录。我们发现53项研究报告了饲养场到达后45天内BRD发病率。荟萃分析纳入了最大的研究网络,涉及来自14项研究的17种疫苗方案。与以前的综述一致,我们发现很少有令人信服的证据表明在饲养场或接近饲养场时使用疫苗可以降低BRD诊断的发生率。
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引用次数: 26
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Animal Health Research Reviews
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