Pub Date : 2024-01-01DOI: 10.1016/j.crbiot.2024.100234
Yuxin Chen , Kehong Wang , Jun Huang , Xiaopeng Li , Yunfeng Rui
In the rapidly advancing field of modern medicine, despite the availability of sophisticated techniques, suturing remains a fundamental procedure in both surgical and internal medicine operations. However, this traditional method inevitably gives rise to issues such as inflammation, fibrosis, or secondary damage. Laser tissue welding and soldering technologies offer a non-contact approach to surgical suturing with advantages including simplicity of operation, reduced fibrosis tendency, and ensured wound closure strength. Nevertheless, its applications have been attempts at clinical trials but no actual implementation. The development and implementation of this technique have the potential to revolutionize both internal and external surgery by enabling automated suture placement. This holds significant importance for ensuring suture quality and postoperative performance. This article provides a detailed summary and discussion on the current applications of this biotechnologies in various organ systems within the human body, as well as an exploration into the interaction mechanisms between tissues and lasers. Additionally, it presents a comprehensive analysis and discussion on laser types suitable for bio tissue laser soldering. Prospects for addressing tissue fibrosis resulting from laser contactless suturing are also explored. These insights will serve as valuable references and guidance for future advancements in utilizing lasers as viable alternatives in human surgical suturing.
{"title":"An extensive evaluation of laser tissue welding and soldering biotechnologies: Recent advancements, progress, and applications","authors":"Yuxin Chen , Kehong Wang , Jun Huang , Xiaopeng Li , Yunfeng Rui","doi":"10.1016/j.crbiot.2024.100234","DOIUrl":"https://doi.org/10.1016/j.crbiot.2024.100234","url":null,"abstract":"<div><p>In the rapidly advancing field of modern medicine, despite the availability of sophisticated techniques, suturing remains a fundamental procedure in both surgical and internal medicine operations. However, this traditional method inevitably gives rise to issues such as inflammation, fibrosis, or secondary damage. Laser tissue welding and soldering technologies offer a non-contact approach to surgical suturing with advantages including simplicity of operation, reduced fibrosis tendency, and ensured wound closure strength. Nevertheless, its applications have been attempts at clinical trials but no actual implementation. The development and implementation of this technique have the potential to revolutionize both internal and external surgery by enabling automated suture placement. This holds significant importance for ensuring suture quality and postoperative performance. This article provides a detailed summary and discussion on the current applications of this biotechnologies in various organ systems within the human body, as well as an exploration into the interaction mechanisms between tissues and lasers. Additionally, it presents a comprehensive analysis and discussion on laser types suitable for bio tissue laser soldering. Prospects for addressing tissue fibrosis resulting from laser contactless suturing are also explored. These insights will serve as valuable references and guidance for future advancements in utilizing lasers as viable alternatives in human surgical suturing.</p></div>","PeriodicalId":52676,"journal":{"name":"Current Research in Biotechnology","volume":null,"pages":null},"PeriodicalIF":3.6,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590262824000601/pdfft?md5=53b938ac0a82295083cb0c2ef88932ee&pid=1-s2.0-S2590262824000601-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141482831","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Many microorganisms pose a threat to human health due to the ever-increasing bacterial resistance to conventional drugs. Nowadays, searching for new alternatives to conventional antibiotics to fight bacterial resistance is a main task. Thus, natural molecules such as amino acids and peptides arise as possible solutions to the problem. The antimicrobial activity of targeted compounds was studied by the agar-diffusion method, using the prepared working solutions of the targeted peptides with the corresponding concentrations. The results of the antimicrobial activity against different test pathogens show specificity, as antimicrobial activity against the used test microorganisms was not found in the investigated short-chain synthetic peptides Si6, Si3 and Si13. Antimicrobial activity against Bacillus cereus, Staphylococcus aureus, Staphylococcus epidermidis, Propionibacterium acnes, Escherichia coli, Pseudomonas aeruginosa, and the yeasts Malassezia furfur and Candida albicans was established for the long-chain synthetic peptides Si1, Si5 and Si16, except Si5 which does not show activity against pathogenic fungal strain C. albicans. The compound Si16 where natural Leu in (KLAKLAK)2-NH2 is replaced by unnatural Nle is the best candidate for medical drug due to the combined antibacterial and antiproliferative effect as well as long hydrolytic stability.
{"title":"Antimicrobial activity of (KLAKLAK)–NH2 analogs against pathogenic microbial strains","authors":"Sirine Jaber , Yana Evstatieva , Veronica Nemska , Dilyana Nikolova , Emilia Naydenova , Nelly Georgieva , Dancho Danalev","doi":"10.1016/j.crbiot.2024.100236","DOIUrl":"https://doi.org/10.1016/j.crbiot.2024.100236","url":null,"abstract":"<div><p>Many microorganisms pose a threat to human health due to the ever-increasing bacterial resistance to conventional drugs. Nowadays, searching for new alternatives to conventional antibiotics to fight bacterial resistance is a main task. Thus, natural molecules such as amino acids and peptides arise as possible solutions to the problem. The antimicrobial activity of targeted compounds was studied by the agar-diffusion method, using the prepared working solutions of the targeted peptides with the corresponding concentrations. The results of the antimicrobial activity against different test pathogens show specificity, as antimicrobial activity against the used test microorganisms was not found in the investigated short-chain synthetic peptides <strong>Si6</strong>, <strong>Si3</strong> and <strong>Si13</strong>. Antimicrobial activity against <em>Bacillus cereus</em>, <em>Staphylococcus aureus</em>, <em>Staphylococcus epidermidis</em>, <em>Propionibacterium acnes</em>, <em>Escherichia coli</em>, <em>Pseudomonas aeruginosa</em>, and the yeasts <em>Malassezia furfur</em> and <em>Candida albicans</em> was established for the long-chain synthetic peptides <strong>Si1</strong>, <strong>Si5</strong> and <strong>Si16,</strong> except <strong>Si5</strong> which does not show activity against pathogenic fungal strain <em>C. albicans</em>. The compound <strong>Si16</strong> where natural Leu in (KLAKLAK)<sub>2</sub>-NH<sub>2</sub> is replaced by unnatural Nle is the best candidate for medical drug due to the combined antibacterial and antiproliferative effect as well as long hydrolytic stability.</p></div>","PeriodicalId":52676,"journal":{"name":"Current Research in Biotechnology","volume":null,"pages":null},"PeriodicalIF":3.6,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590262824000625/pdfft?md5=07b1b34ecb7b9a414f290ceda379d2ec&pid=1-s2.0-S2590262824000625-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141594523","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-01DOI: 10.1016/j.crbiot.2024.100251
Biodiesel production from microalgae is considered one of the main candidates to replace conventional fuels. In addition, the use of ultrasound can be crucial to enhance different steps in the industrial production of this biofuel from this type of microorganisms. This review focuses on the potential of ultrasound technology to increase lipid content in microalgae and improve biomass harvesting and lipid extraction, as well as its potential use in oil transesterification. Specifically, the use of ultrasound pulses in the stationary phase of microalgae growth can act as a stimulus to improve lipid content and can oxidise cell walls, improving lipid extraction and subsequent harvesting. Furthermore, if assisted with ultrasound, the reaction time, alcohol/oil molar ratio, separation process, and energy consumption of transesterification can be reduced compared to conventional methods due to the reduction of the interfacial area. Finally, ultrasound technology can be used if some of the previous processes (i.e., in situ transesterification) are coupled to decrease the number of steps in an industrial process. Regarding scale-up, although some ultrasonic reactors working in continuous operation mode have already been proposed, there are still some drawbacks, mainly related to the knowledge of bubble behaviour in different media and their effect on reactions (enzymatic or in situ transesterifications) as well as the energy consumption if ultrasound technology is used in more than one process simultaneously. These facts need to be studied in more detail to introduce this technology in a large-scale process.
{"title":"Ultrasound-assisted steps for producing biodiesel from microalgae","authors":"","doi":"10.1016/j.crbiot.2024.100251","DOIUrl":"10.1016/j.crbiot.2024.100251","url":null,"abstract":"<div><p>Biodiesel production from microalgae is considered one of the main candidates to replace conventional fuels. In addition, the use of ultrasound can be crucial to enhance different steps in the industrial production of this biofuel from this type of microorganisms. This review focuses on the potential of ultrasound technology to increase lipid content in microalgae and improve biomass harvesting and lipid extraction, as well as its potential use in oil transesterification. Specifically, the use of ultrasound pulses in the stationary phase of microalgae growth can act as a stimulus to improve lipid content and can oxidise cell walls, improving lipid extraction and subsequent harvesting. Furthermore, if assisted with ultrasound, the reaction time, alcohol/oil molar ratio, separation process, and energy consumption of transesterification can be reduced compared to conventional methods due to the reduction of the interfacial area. Finally, ultrasound technology can be used if some of the previous processes (i.e., in situ transesterification) are coupled to decrease the number of steps in an industrial process. Regarding scale-up, although some ultrasonic reactors working in continuous operation mode have already been proposed, there are still some drawbacks, mainly related to the knowledge of bubble behaviour in different media and their effect on reactions (enzymatic or in situ transesterifications) as well as the energy consumption if ultrasound technology is used in more than one process simultaneously. These facts need to be studied in more detail to introduce this technology in a large-scale process.</p></div>","PeriodicalId":52676,"journal":{"name":"Current Research in Biotechnology","volume":null,"pages":null},"PeriodicalIF":3.6,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590262824000777/pdfft?md5=914b82cdf3057fb56cb769058368bd7b&pid=1-s2.0-S2590262824000777-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142152047","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-01DOI: 10.1016/j.crbiot.2024.100205
Aparajita Sen , Jyoti Oswalia , Sneha Yadav , Meenakshi Vachher , Arti Nigam
Nanozymes are a class of nanoparticles that can mimic enzyme activity and be used for various applications in modern clinical therapy. It has recently been observed that nanozymes have multi-enzyme mimicking activities, are highly stable, versatile and easily modified. Moreover, they have high catalytic efficiency, high recovery rates, improved substrate specificity and are suitable for mass production. The catalytic mechanisms of nanozymes mainly include catalase, peroxidase, oxidase, hydrolase and superoxide dismutase-like activities, which enable nanozymes to be used as potential therapeutics against a plethora of infectious and lifestyle disorders. Nanozymes have been used as therapeutics against cancer, inflammatory diseases, neurodegenerative and neurological disorders, bacterial, fungal and viral infections, wounds and diseases associated with Reactive Oxygen Species. The purpose of writing this review is to provide a comprehensive compilation of novel research work that has taken place in the last few years regarding the use of nanozymes for therapy. We have compiled the various kinds of nanozymes and elaborated on their anti-tumorigenic, antioxidant, anti-inflammatory, antibacterial, antifungal, antiviral, and neuroprotective roles. Their modes of action and enzymatic targets have also been discussed. The types and mechanisms of synthesis of nanozymes have also been summarized, along with interactions of nanoparticles with nanozymes. Furthermore, strategies to enhance the compatibility between nanoparticles and nanozymes have also been analyzed. Major focus has been laid on therapeutic applications of nanozymes. The challenges and future perspectives of using nanozymes in clinical therapy have also been debated in the later sections.
{"title":"Recent trends in nanozyme research and their potential therapeutic applications","authors":"Aparajita Sen , Jyoti Oswalia , Sneha Yadav , Meenakshi Vachher , Arti Nigam","doi":"10.1016/j.crbiot.2024.100205","DOIUrl":"https://doi.org/10.1016/j.crbiot.2024.100205","url":null,"abstract":"<div><p>Nanozymes are a class of nanoparticles that can mimic enzyme activity and be used for various applications in modern clinical therapy. It has recently been observed that nanozymes have multi-enzyme mimicking activities, are highly stable, versatile and easily modified. Moreover, they have high catalytic efficiency, high recovery rates, improved substrate specificity and are suitable for mass production. The catalytic mechanisms of nanozymes mainly include catalase, peroxidase, oxidase, hydrolase and superoxide dismutase-like activities, which enable nanozymes to be used as potential therapeutics against a plethora of infectious and lifestyle disorders. Nanozymes have been used as therapeutics against cancer, inflammatory diseases, neurodegenerative and neurological disorders, bacterial, fungal and viral infections, wounds and diseases associated with Reactive Oxygen Species. The purpose of writing this review is to provide a comprehensive compilation of novel research work that has taken place in the last few years regarding the use of nanozymes for therapy. We have compiled the various kinds of nanozymes and elaborated on their anti-tumorigenic, antioxidant, anti-inflammatory, antibacterial, antifungal, antiviral, and neuroprotective roles. Their modes of action and enzymatic targets have also been discussed. The types and mechanisms of synthesis of nanozymes have also been summarized, along with interactions of nanoparticles with nanozymes. Furthermore, strategies to enhance the compatibility between nanoparticles and nanozymes have also been analyzed. Major focus has been laid on therapeutic applications of nanozymes. The challenges and future perspectives of using nanozymes in clinical therapy have also been debated in the later sections.</p></div>","PeriodicalId":52676,"journal":{"name":"Current Research in Biotechnology","volume":null,"pages":null},"PeriodicalIF":5.6,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590262824000315/pdfft?md5=7a054637928ba074e88ce430c15940e9&pid=1-s2.0-S2590262824000315-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140347075","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-01DOI: 10.1016/j.crbiot.2024.100204
Muhammad Ajmal Shah , Savaira Tariq , Syed Muhammad Abuzar , Kainat Ilyas , Irtaza Qadees , Ifat Alsharif , Khairul Anam , Reem T. Almutairi , Khalid A. Al-Regaiey , Ahmad O. Babalghith , Uzma Saleem , Abd. Malik , Mohannad A. Almikhlaf , Yasmene F. Alanazi , Mody Albalawi , Ana Sanches Silva
Diabesity is the concurrence of both diabetes and obesity, and it has become a modern epidemic. It is linked by numerous common pathophysiological mechanisms which can be targeted to combat its harms. The available treatments for diabesity include the medications that are also causing several adverse side effects. The increasing healthcare costs, both direct and indirect, for diabesity management continue to rise, underscoring the urgency to find efficient and cost-effective treatment methods. These circumstances have prompted a shift in research towards exploring natural dietary alternatives for treatment. Among these dietary substitutes, citrus fruits rich in polyphenols have caught the attention of researchers. This review narrates the major interconnection of diabesity and brings out the various mechanisms in which citrus polyphenols can be used for its management. Citrus polyphenols fight against diabesity by targeting adipokines, reactive oxygen species, leptin deficiency, metabolic endotoxemia, peroxisomes proliferator activating receptors, insulin signaling, starch hydrolyzing enzymes, and human islet amyloid polypeptide. The studies on the role of citrus polyphenols in the treatment of diabesity have shown clearly that addressing various physiological systems which can interact with citrus polyphenols can help to manage diabesity and related health concerns.
{"title":"Peel waste of citrus fruits: A valuable and renewable source of polyphenols for the treatment of diabesity","authors":"Muhammad Ajmal Shah , Savaira Tariq , Syed Muhammad Abuzar , Kainat Ilyas , Irtaza Qadees , Ifat Alsharif , Khairul Anam , Reem T. Almutairi , Khalid A. Al-Regaiey , Ahmad O. Babalghith , Uzma Saleem , Abd. Malik , Mohannad A. Almikhlaf , Yasmene F. Alanazi , Mody Albalawi , Ana Sanches Silva","doi":"10.1016/j.crbiot.2024.100204","DOIUrl":"https://doi.org/10.1016/j.crbiot.2024.100204","url":null,"abstract":"<div><p>Diabesity is the concurrence of both diabetes and obesity, and it has become a modern epidemic. It is linked by numerous common pathophysiological mechanisms which can be targeted to combat its harms. The available treatments for diabesity include the medications that are also causing several adverse side effects. The increasing healthcare costs, both direct and indirect, for diabesity management continue to rise, underscoring the urgency to find efficient and cost-effective treatment methods. These circumstances have prompted a shift in research towards exploring natural dietary alternatives for treatment. Among these dietary substitutes, citrus fruits rich in polyphenols have caught the attention of researchers. This review narrates the major interconnection of diabesity and brings out the various mechanisms in which citrus polyphenols can be used for its management. Citrus polyphenols fight against diabesity by targeting adipokines, reactive oxygen species, leptin deficiency, metabolic endotoxemia, peroxisomes proliferator activating receptors, insulin signaling, starch hydrolyzing enzymes, and human islet amyloid polypeptide. The studies on the role of citrus polyphenols in the treatment of diabesity have shown clearly that addressing various physiological systems which can interact with citrus polyphenols can help to manage diabesity and related health concerns.</p></div>","PeriodicalId":52676,"journal":{"name":"Current Research in Biotechnology","volume":null,"pages":null},"PeriodicalIF":5.6,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590262824000303/pdfft?md5=956c9e0a3d2e055f878894f50e099fb6&pid=1-s2.0-S2590262824000303-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140347076","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-01DOI: 10.1016/j.crbiot.2024.100207
Yi-Wei Zhao , Li-Li Du , Bing Hu , Hong-Yong Lin , Bin Liang , Yun-Peng Song , Yu-Qi Wang , Hong-Wu Wang , Peng-Fei Li , Ai-Jie Wang , Hong-Cheng Wang
Nitrous oxide (N2O) emissions from the wastewater treatment sector are a significant contributor to global greenhouse gas levels. This investigation delves into the mechanisms of N2O generation and uptake, correlating microbial processes with variables such as influent characteristics and operational parameters. The nature of carbon substrates in the influent profoundly influences microbial consortia and N2O output. Elevating the carbon-to-nitrogen (C/N) ratio has been shown to curtail N2O emissions by alleviating the competitive dynamics among denitrifying enzymes. Optimal activity of N2O reductase is achieved by maintaining a neutral to mildly alkaline pH and stable ambient temperatures. It is imperative to circumvent extreme aeration rates and prolonged aeration periods to reduce N2O release. The study underscores the importance of an effective carbon feed strategy and advocates for prolonged hydraulic retention times (HRT) and sludge retention times (SRT) in activated sludge suspension systems to inhibit N2O escape. Notably, excessive internal recycling, coupled with heightened dissolved oxygen (DO) levels in aerobic zones, intensifies N2O emission risks. Moreover, the presence of hazardous contaminants, such as heavy metals and antibiotics, interferes with nitrogen elimination processes, warranting a comprehensive assessment of consequent N2O emission hazards. This research provides a scientific basis as well as practical management approaches to diminish N2O emissions.
{"title":"Impact of influent characteristics and operational parameters on nitrous oxide emissions in wastewater treatment: Strategies for mitigation and microbial insights","authors":"Yi-Wei Zhao , Li-Li Du , Bing Hu , Hong-Yong Lin , Bin Liang , Yun-Peng Song , Yu-Qi Wang , Hong-Wu Wang , Peng-Fei Li , Ai-Jie Wang , Hong-Cheng Wang","doi":"10.1016/j.crbiot.2024.100207","DOIUrl":"https://doi.org/10.1016/j.crbiot.2024.100207","url":null,"abstract":"<div><p>Nitrous oxide (N<sub>2</sub>O) emissions from the wastewater treatment sector are a significant contributor to global greenhouse gas levels. This investigation delves into the mechanisms of N<sub>2</sub>O generation and uptake, correlating microbial processes with variables such as influent characteristics and operational parameters. The nature of carbon substrates in the influent profoundly influences microbial consortia and N<sub>2</sub>O output. Elevating the carbon-to-nitrogen (C/N) ratio has been shown to curtail N<sub>2</sub>O emissions by alleviating the competitive dynamics among denitrifying enzymes. Optimal activity of N<sub>2</sub>O reductase is achieved by maintaining a neutral to mildly alkaline pH and stable ambient temperatures. It is imperative to circumvent extreme aeration rates and prolonged aeration periods to reduce N<sub>2</sub>O release. The study underscores the importance of an effective carbon feed strategy and advocates for prolonged hydraulic retention times (HRT) and sludge retention times (SRT) in activated sludge suspension systems to inhibit N<sub>2</sub>O escape. Notably, excessive internal recycling, coupled with heightened dissolved oxygen (DO) levels in aerobic zones, intensifies N<sub>2</sub>O emission risks. Moreover, the presence of hazardous contaminants, such as heavy metals and antibiotics, interferes with nitrogen elimination processes, warranting a comprehensive assessment of consequent N<sub>2</sub>O emission hazards. This research provides a scientific basis as well as practical management approaches to diminish N<sub>2</sub>O emissions.</p></div>","PeriodicalId":52676,"journal":{"name":"Current Research in Biotechnology","volume":null,"pages":null},"PeriodicalIF":5.6,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590262824000339/pdfft?md5=49edcb2a99b41772b18b4f21073db132&pid=1-s2.0-S2590262824000339-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140347077","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-01DOI: 10.1016/j.crbiot.2024.100195
Thomas Nury , Imen Ghzaiel , Aziz Hichami , Claudio Caccia , Valerio Leoni , Vivien Pires , Atanas G Atanasov , Amira Zarrouk , Gérard Lizard , Anne Vejux
7-ketocholesterol is a cytotoxic oxysterol which is frequently increased in many chronic inflammatory and age-related diseases. Thus, the inhibition of the toxicity of 7-ketocholesterol is a major challenge to treat these diseases. 158N oligodendrocytes were used to evaluate the cytoprotective effects of lipids: ω-3 and ω-9 fatty acids (α-linolenic acid (C18:3n-3), eicosapentaenoic acid (C20:5n-3), docosahexaenoic acid (C22:6n-3), erucic acid (C22:1n-9) and oleic acid (C18:1n-9)), Lorenzo's oil (a mixture of oleic and erucic acid, 4:1) and sulfo-N-succinimidyl oleate (SSO, a synthetic derivative of oleic acid). On 158N cells, the ability of these molecules to inhibit 7KC-induced oxiapoptophagy (plasma membrane alteration, loss of ΔΨm, peroxisomal dysfunction, reactive oxygen species overproduction, induction of apoptosis and autophagy) were determined. ARPE-19 epithelial retinal cells were also used to evaluate the cytoprotective effect of SSO on 7KC-induced cell death. Unlike ω-3 and ω-9 fatty acids and Lorenzo's oil, sulfo-N-succinimidyl oleate had no cytotoxic effects over a wide range of concentrations. Noteworthy, unlike fatty acids and Lorenzo's oil, the cytoprotective effects of sulfo-N-succinimidyl oleate on 7KC-induced oxiapoptophagy, a caspase-dependent mode of cell death on 158N cells, were not associated with an accumulation of lipid droplets. In addition, on ARPE-19 cells, sulfo-N-succinimidyl oleate prevented 7KC-induced oxidative stress and cell death. These different characteristics of SSO make it possible to envisage its use for therapeutic purposes in diseases where 7-ketocholesterol levels are increased without eventual secondary side effects due to lipid droplets formation.
{"title":"Lipid droplets dependent or independent cytoprotective activities of unsaturated fatty acids, Lorenzo’s oil and sulfo-N-succinimidyl oleate on 7-ketocholesterol-induced oxidative stress, organelle dysfunction and cell death on 158N and ARPE-19 cells: Cell targets and benefits of sulfo-N-succinimidyl oleate","authors":"Thomas Nury , Imen Ghzaiel , Aziz Hichami , Claudio Caccia , Valerio Leoni , Vivien Pires , Atanas G Atanasov , Amira Zarrouk , Gérard Lizard , Anne Vejux","doi":"10.1016/j.crbiot.2024.100195","DOIUrl":"10.1016/j.crbiot.2024.100195","url":null,"abstract":"<div><p>7-ketocholesterol is a cytotoxic oxysterol which is frequently increased in many chronic inflammatory and age-related diseases. Thus, the inhibition of the toxicity of 7-ketocholesterol is a major challenge to treat these diseases. 158N oligodendrocytes were used to evaluate the cytoprotective effects of lipids: ω-3 and ω-9 fatty acids (α-linolenic acid (C18:3n-3), eicosapentaenoic acid (C20:5n-3), docosahexaenoic acid (C22:6n-3), erucic acid (C22:1n-9) and oleic acid (C18:1n-9)), Lorenzo's oil (a mixture of oleic and erucic acid, 4:1) and sulfo-N-succinimidyl oleate (SSO, a synthetic derivative of oleic acid). On 158N cells, the ability of these molecules to inhibit 7KC-induced oxiapoptophagy (plasma membrane alteration, loss of ΔΨm, peroxisomal dysfunction, reactive oxygen species overproduction, induction of apoptosis and autophagy) were determined. ARPE-19 epithelial retinal cells were also used to evaluate the cytoprotective effect of SSO on 7KC-induced cell death. Unlike ω-3 and ω-9 fatty acids and Lorenzo's oil, sulfo-N-succinimidyl oleate had no cytotoxic effects over a wide range of concentrations. Noteworthy, unlike fatty acids and Lorenzo's oil, the cytoprotective effects of sulfo-N-succinimidyl oleate on 7KC-induced oxiapoptophagy, a caspase-dependent mode of cell death on 158N cells, were not associated with an accumulation of lipid droplets. In addition, on ARPE-19 cells, sulfo-N-succinimidyl oleate prevented 7KC-induced oxidative stress and cell death. These different characteristics of SSO make it possible to envisage its use for therapeutic purposes in diseases where 7-ketocholesterol levels are increased without eventual secondary side effects due to lipid droplets formation.</p></div>","PeriodicalId":52676,"journal":{"name":"Current Research in Biotechnology","volume":null,"pages":null},"PeriodicalIF":5.6,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590262824000212/pdfft?md5=1e23bfac82851964c3d64c5b12824733&pid=1-s2.0-S2590262824000212-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140086507","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-01DOI: 10.1016/j.crbiot.2024.100200
Sebastian G. Huayamares, Ryan Zenhausern, David Loughrey
RNA therapeutics are promising for the treatment of lung diseases where small molecules and biologics have failed to have much success in the past. While siRNA and mRNA drugs are now FDA-approved for rare diseases in the liver and as vaccines for infectious diseases, they became clinically established only after suitable advances in drug delivery platforms, such as the case of lipid nanoparticles. Localized delivery of RNA therapeutics through nanocarriers optimized for inhaled administration has the potential to address respiratory diseases without toxicity concerns from off-target effects. Here, we review recent clinical and preclinical progress of nanocarriers for inhaled RNA delivery, analyze the properties of nanocarrier-mediated FDA-approved drugs for respiratory diseases, and highlight compelling efficacy endpoints anticipated from ongoing clinical programs. We also present an overview of physiological challenges and opportunities that impact delivery of inhaled RNA therapeutics to the lungs. Finally, we discuss relevant models for preclinical testing, and translational considerations that can be used to help develop future nanocarriers for inhaled administration of RNA therapeutics.
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Pub Date : 2024-01-01DOI: 10.1016/j.crbiot.2024.100176
Nikolay T. Tzvetkov , Martina I. Peeva , Maya G. Georgieva , Vera Deneva , Aneliya A. Balacheva , Ivan P. Bogdanov , Maria Ponticelli , Luigi Milella , Kiril Kirilov , Maima Matin , Hans-Georg Stammler , Atanas G. Atanasov , Liudmil Antonov
Coronavirus disease 2019 (COVID-19) still remains the most disastrous infection continuously affecting millions of people worldwide. Herein, we performed a comparative study between the anti-influenza drug favipiravir (FAV) and the anti-thalassemia drug deferiprone (DFP) in order to examine their potential as basic scaffolds for the generation of most effective and structurally novel antivirals. To conduct the initial molecular modelling and virtual screening steps, our recently proposed single crystal X-ray diffraction (SCXRD)/HYdrogen DEssolvation (HYDE) technology platform has been used. This platform allows molecular design, interactive prioritization and virtual evaluation of newly designed molecules, simultaneously affecting two COVID-related targets, including angiotensin-converting enzyme 2 (ACE2) as a host-cellular receptor (host-based approach) and the main protease (Mpro) enzyme of the spike glycoprotein of SARS-Cov-2 (virus-based approach). Based on the molecular docking results, DFP has shown higher binding affinity (Ki HYDE values) over FAV towards both biological targets. The tautomeric, physicochemical, and biological properties of FAV and DFP have been studied both experimentally and theoretically using molecular spectroscopy (UV–VIS absorption), parallel artificial membrane permeability assay, and cell biology (PAMPA and MTT assay), as well as DFT quantum chemical calculations. According to the obtained results, the enol tautomers of both compounds are considerably more stable in different organic solvents. However, the keto tautomer of FAV was estimated to be most preferable under physiological conditions, which is in good agreement with the molecular docking studies. The isolated crystal structure of DFP is in an excellent agreement with the computation in respect of the most stable tautomer. Combined single X-ray/molecular modeling studies including HYDE analyses provided not only insights into the protein–ligand interactions within the binding site of SARS-Cov-2-ACE2 and SARS-Cov-2-Mpro, but also a valuable information regarding the most stable enol tautomeric form of DFP that contributes to its estimated higher potency against these targets.
{"title":"Favipiravir vs. Deferiprone: Tautomeric, photophysical, in vitro biological studies, and binding interactions with SARS-Cov-2-MPro/ACE2","authors":"Nikolay T. Tzvetkov , Martina I. Peeva , Maya G. Georgieva , Vera Deneva , Aneliya A. Balacheva , Ivan P. Bogdanov , Maria Ponticelli , Luigi Milella , Kiril Kirilov , Maima Matin , Hans-Georg Stammler , Atanas G. Atanasov , Liudmil Antonov","doi":"10.1016/j.crbiot.2024.100176","DOIUrl":"10.1016/j.crbiot.2024.100176","url":null,"abstract":"<div><p>Coronavirus disease 2019 (COVID-19) still remains the most disastrous infection continuously affecting millions of people worldwide. Herein, we performed a comparative study between the anti-influenza drug favipiravir (FAV) and the anti-thalassemia drug deferiprone (DFP) in order to examine their potential as basic scaffolds for the generation of most effective and structurally novel antivirals. To conduct the initial molecular modelling and virtual screening steps, our recently proposed single crystal X-ray diffraction (SCXRD)/HYdrogen DEssolvation (HYDE) technology platform has been used. This platform allows molecular design, interactive prioritization and virtual evaluation of newly designed molecules, simultaneously affecting two COVID-related targets, including angiotensin-converting enzyme 2 (ACE2) as a host-cellular receptor (<em>host-based approach</em>) and the main protease (M<sup>pro</sup>) enzyme of the spike glycoprotein of SARS-Cov-2 (<em>virus-based approach</em>). Based on the molecular docking results, DFP has shown higher binding affinity (<em>K</em><sub>i HYDE</sub> values) over FAV towards both biological targets. The tautomeric, physicochemical, and biological properties of FAV and DFP have been studied both experimentally and theoretically using molecular spectroscopy (UV–VIS absorption), parallel artificial membrane permeability assay, and cell biology (PAMPA and MTT assay), as well as DFT quantum chemical calculations. According to the obtained results, the enol tautomers of both compounds are considerably more stable in different organic solvents. However, the keto tautomer of FAV was estimated to be most preferable under physiological conditions, which is in good agreement with the molecular docking studies. The isolated crystal structure of DFP is in an excellent agreement with the computation in respect of the most stable tautomer. Combined single X-ray/molecular modeling studies including HYDE analyses provided not only insights into the protein–ligand interactions within the binding site of SARS-Cov-2-ACE2 and SARS-Cov-2-M<sup>pro</sup>, but also a valuable information regarding the most stable enol tautomeric form of DFP that contributes to its estimated higher potency against these targets.</p></div>","PeriodicalId":52676,"journal":{"name":"Current Research in Biotechnology","volume":null,"pages":null},"PeriodicalIF":5.6,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590262824000029/pdfft?md5=a17204b49a75bb8e5de9f739f6f9c889&pid=1-s2.0-S2590262824000029-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139454524","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-01-01DOI: 10.1016/j.crbiot.2024.100242
Microbial biofilms are complex communities with cells embedded in an extracellular matrix. We previously discovered that salt-tolerant yeasts Debaryomyces fabryi, Schwanniomyces etchellsii, Schwanniomyces polymorphus and Kluyveromyces marxianus were able to form biofilms when grown in seawater- but not in freshwater-based media. The extracellular matrices of these biofilms were composed mainly of carbohydrates and proteins involved in metabolic processes and the response to stimuli. We herein focus on one of these yeasts, S. etchellsii, to explore its molecular determinants for biofilm formation in depth. We describe new analyses in which the proteome of cells in the biofilm network formed in seawater-based media is compared to that of the planktonic cells co-existing with them and with cells suspended in freshwater-based growth media. According to our data, in both cases biofilms cells contain overexpressed proteins involved in protein biosynthesis, in membrane structures and in transport mediated by vesicles. The great number of proteins with higher expression in these cells participating in translation and located in ribosomes indicate that they are more engaged in protein biosynthesis than their counterparts. Analyses carried out with the STRING database reinforced these results. Cell viability was also wider in biofilm cells. Our analyses have also allowed us to detect in S. etchellsii a homolog of the Candida albicans Spf1p. This protein is an ion transporter P-type ATPase in this microorganism, which participates in several processes, including cellular adhesion and cell wall organization and biogenesis. Our work provides a dataset with a large number of unknown proteins of S. etchellsii that show sequence similarity to proteins from other yeasts; this knowledge will help to better understand the proteome of this yeast and to look for future biotechnological applications.
微生物生物膜是细胞嵌入细胞外基质的复杂群落。我们之前发现,耐盐酵母菌 Debaryomyces fabryi、Schwanniomyces etchellsii、Schwanniomyces polymorphus 和 Kluyveromyces marxianus 在海水培养基中生长时能够形成生物膜,而在淡水培养基中则不能。这些生物膜的胞外基质主要由碳水化合物和蛋白质组成,参与新陈代谢过程并对刺激做出反应。在本文中,我们将重点关注其中一种酵母菌 S. etchellsii,深入探讨其形成生物膜的分子决定因素。我们描述了新的分析方法,将在海水培养基中形成的生物膜网络中的细胞的蛋白质组与与之共存的浮游细胞的蛋白质组以及悬浮在淡水培养基中的细胞的蛋白质组进行了比较。根据我们的数据,在这两种情况下,生物膜细胞都含有参与蛋白质生物合成、膜结构和囊泡运输的高表达蛋白质。在这些细胞中,大量参与翻译和位于核糖体中的蛋白质表达量较高,这表明它们比同类细胞更多地参与蛋白质的生物合成。利用 STRING 数据库进行的分析进一步证实了这些结果。生物膜细胞的存活率也更高。通过分析,我们还在 S. etchellsii 中发现了白色念珠菌 Spf1p 的同源物。这种蛋白质是该微生物的一种离子转运P型ATP酶,参与了多个过程,包括细胞粘附、细胞壁组织和生物生成。我们的工作提供了一个数据集,其中包含了大量与其他酵母蛋白质序列相似的 S. etchellsii 未知蛋白质;这些知识将有助于更好地了解这种酵母的蛋白质组,并寻找未来的生物技术应用。
{"title":"Proteomics characterization of biofilm formation by salt-tolerant Schwannyomyces etchellsii in seawater-based growth medium","authors":"","doi":"10.1016/j.crbiot.2024.100242","DOIUrl":"10.1016/j.crbiot.2024.100242","url":null,"abstract":"<div><p>Microbial biofilms are complex communities with cells embedded in an extracellular matrix. We previously discovered that salt-tolerant yeasts <em>Debaryomyces fabryi</em>, <em>Schwanniomyces etchellsii</em>, <em>Schwanniomyces polymorphus</em> and <em>Kluyveromyces marxianus</em> were able to form biofilms when grown in seawater- but not in freshwater-based media. The extracellular matrices of these biofilms were composed mainly of carbohydrates and proteins involved in metabolic processes and the response to stimuli. We herein focus on one of these yeasts, <em>S. etchellsii</em>, to explore its molecular determinants for biofilm formation in depth. We describe new analyses in which the proteome of cells in the biofilm network formed in seawater-based media is compared to that of the planktonic cells co-existing with them and with cells suspended in freshwater-based growth media. According to our data, in both cases biofilms cells contain overexpressed proteins involved in protein biosynthesis, in membrane structures and in transport mediated by vesicles. The great number of proteins with higher expression in these cells participating in translation and located in ribosomes indicate that they are more engaged in protein biosynthesis than their counterparts. Analyses carried out with the STRING database reinforced these results. Cell viability was also wider in biofilm cells. Our analyses have also allowed us to detect in <em>S. etchellsii</em> a homolog of the <em>Candida albicans</em> Spf1p. This protein is an ion transporter P-type ATPase in this microorganism, which participates in several processes, including cellular adhesion and cell wall organization and biogenesis. Our work provides a dataset with a large number of unknown proteins of <em>S. etchellsii</em> that show sequence similarity to proteins from other yeasts; this knowledge will help to better understand the proteome of this yeast and to look for future biotechnological applications.</p></div>","PeriodicalId":52676,"journal":{"name":"Current Research in Biotechnology","volume":null,"pages":null},"PeriodicalIF":3.6,"publicationDate":"2024-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2590262824000686/pdfft?md5=c33138ba88f1dcf784c9d4c370759807&pid=1-s2.0-S2590262824000686-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141964041","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}