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Vancomycin Dosing Regimen to Obtain the Target Area Under the Concentration-Time Curve, Which Provides an Early Treatment Response for Patients on Haemodialysis. 万古霉素给药方案在浓度-时间曲线下获得靶区,为血液透析患者提供早期治疗反应。
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-01-03 DOI: 10.3390/antibiotics15010047
Minori Kambe, Takashi Ueda, Kazutaka Oda, Kazuhiro Sugiyama, Kazuhiko Nakajima, Naruhito Otani, Motoi Uchino, Yuki Horio, Ryuichi Kuwahara, Masanobu Toyama, Makoto Tomita, Atsuki Ide, Mayuko Ao, Yasuhiro Nozaki, Yoshio Takesue

Objectives: This study aimed to clarify the area under the curve (AUC) for obtaining better clinical outcomes and to demonstrate vancomycin dosing for achieving the AUC in haemodialysis (HD). Methods: The vancomycin concentration was measured before the second HD. The AUC24-48h after the initial HD was assessed to evaluate its correlation with an early clinical response and to determine the dosing regimen, assuming an inter-dialysis interval of 48 h, even if the interval was 72 h. Results: An AUC/MIC ≥ 400 was an independent factor for an early response in treating MRSA infections and infections caused by methicillin-resistant Gram-positive organisms. An AUC of 600-700 μg·h/mL did not increase the incidence of adverse effects compared with that of <600 μg·h/mL. An AUC of 400-700 μg·h/mL was obtained in 90.5% of patients with a loading dose of 30 mg/kg followed by a maintenance dose of 10 mg/kg. Pre-dialysis concentrations were significantly higher than the trough concentration required in non-HD patients to achieve the same AUC category, and AUC24-48h was strongly correlated with pre-dialysis concentrations (R2 = 0.921). In a receiver operating characteristic curve, the cut-off value for an early response was 16.8 μg/mL for the pre-dialysis concentration/MIC. Conclusions: AUC24-48h after the initial HD/MIC of ≥400 μg/mL improves the clinical outcomes in patients on HD, and the target PK/PD can be achieved with an upper range of the recommended dose. The pre-dialysis concentration may be a reliable surrogate for the AUC, and the vancomycin dose could be adjusted according to this PK target.

目的:本研究旨在明确曲线下面积(AUC),以获得更好的临床结果,并证明万古霉素剂量可以实现血液透析(HD)的AUC。方法:第二次HD前测定万古霉素浓度。评估初始HD后的auc24 -48小时,以评估其与早期临床反应的相关性,并确定给药方案,假设透析间隔为48小时,即使间隔为72小时。结果:AUC/MIC≥400是治疗MRSA感染和耐甲氧西林革兰氏阳性菌引起的感染的早期反应的独立因素。与透析前浓度相比,600 ~ 700 μg·h/mL的AUC并没有增加不良反应的发生率,且与透析前浓度密切相关(R2 = 0.921)。在受试者工作特征曲线中,透析前浓度/MIC的早期反应临界值为16.8 μg/mL。结论:初始HD/MIC≥400 μg/mL后的AUC24-48h可改善HD患者的临床预后,且在推荐剂量的上限范围内可达到目标PK/PD。透析前浓度可能是AUC的可靠替代指标,万古霉素剂量可根据该PK靶点进行调整。
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引用次数: 0
Recurrent Urinary Tract Infections in a Patient with Diffuse Large B-Cell Lymphoma and Severe COVID-19: A Single Case of Suspected Immunosuppression Where Antibacterial Therapy Was Not Enough. 1例弥漫性大b细胞淋巴瘤合并重症COVID-19患者复发性尿路感染:单例疑似免疫抑制,抗菌药物治疗不足
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-01-03 DOI: 10.3390/antibiotics15010048
Paula Irina Barata, Liana Maria Chicea, Irena Nedelea, Carmen Nicoleta Strauti, Diana Deleanu, Maria Daniela Moț, Coralia Cotoraci, Cristian Oancea

Background: Non-Hodgkin lymphoma (NHL) is a malignancy of the immune system that includes several subtypes, most commonly diffuse large B-cell lymphoma and follicular lymphoma. Its etiology is multifactorial, with risk factors such as immunosuppressive therapy, infections, chemical exposure, and advanced age. A key aspect is the bidirectional relationship between lymphoma and immunodeficiency, which increases susceptibility to recurrent infections and complicates disease management. Case presentation: One particularly challenging case during the COVID-19 pandemic involved a patient with a personal history of diffuse B-cell non-Hodgkin lymphoma, diagnosed 5 years earlier, who had undergone eight cycles of rituximab-based chemotherapy. The patient tested positive for SARS-CoV-2 for three consecutive months and experienced repeated urinary tract infections warranting more in-depth investigations. The uniqueness of this case lies in the rare association of non-Hodgkin lymphoma, suspected post-rituximab immunodeficiency, severe COVID-19 infection, and recurrent urinary tract infections, which complicated clinical management. Despite appropriate treatment for both respiratory and urinary infections, as well as eight cycles of chemotherapy, the patient's condition continued to deteriorate significantly, ultimately requiring intravenous immunoglobulin replacement therapy. Following the treatment, the patient presented a remarkable clinical improvement, with resolution of the signs and symptoms, and an absence of further recurrent infections. The patient remained clinically stable under regular immunoglobulin replacement therapy, with sustained infection control and improved quality of life. Conclusions: This case highlights the importance of assessing immune status in patients with a hematological malignancy, especially when recurrent infections persist.

背景:非霍奇金淋巴瘤(NHL)是一种免疫系统恶性肿瘤,包括几种亚型,最常见的是弥漫性大b细胞淋巴瘤和滤泡性淋巴瘤。其病因是多因素的,有免疫抑制治疗、感染、化学物质暴露和高龄等危险因素。一个关键方面是淋巴瘤和免疫缺陷之间的双向关系,这增加了对复发性感染的易感性,并使疾病管理复杂化。病例介绍:在COVID-19大流行期间,有一个特别具有挑战性的病例,患者有弥漫性b细胞非霍奇金淋巴瘤的个人病史,5年前被诊断出来,接受了8个周期的美罗华单抗化疗。该患者连续三个月SARS-CoV-2检测呈阳性,并多次出现尿路感染,需要进行更深入的调查。该病例的独特之处在于罕见的非霍奇金淋巴瘤、疑似利妥昔单抗后免疫缺陷、严重的COVID-19感染和复发性尿路感染的合并,这使得临床治疗变得复杂。尽管对呼吸道和泌尿系统感染进行了适当的治疗,并进行了8个周期的化疗,但患者的病情继续明显恶化,最终需要静脉注射免疫球蛋白替代治疗。治疗后,患者临床表现明显改善,体征和症状消失,无进一步复发感染。患者在常规免疫球蛋白替代治疗下保持临床稳定,持续控制感染,改善生活质量。结论:该病例强调了评估血液学恶性肿瘤患者免疫状态的重要性,特别是当反复感染持续存在时。
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引用次数: 0
Metagenomic Comparison of Bat Colony Resistomes Across Anthropogenic and Pristine Habitats. 人类和原始生境中蝙蝠群体抗性组的宏基因组比较。
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-01-03 DOI: 10.3390/antibiotics15010051
Julio David Soto-López, Omar Velásquez-González, Manuel A Barrios-Izás, Moncef Belhassen-García, Juan Luis Muñoz-Bellido, Pedro Fernández-Soto, Antonio Muro

Background/objectives: The mammalian microbiota constitutes a reservoir of antimicrobial resistance genes (ARGs), which can be shaped by environmental and anthropogenic factors. Although bat-associated bacteria have been reported to harbor diverse ARGs globally, the ecological and evolutionary determinants driving this diversity remain unclear.

Methods: To characterize ARG diversity in wildlife exposed to contrasting levels of human influence, we analyzed homologs of resistance mechanisms from the Comprehensive Antibiotic Resistance Database in shotgun metagenomes of bat guano. Samples were collected from a colony exposed to continuous anthropogenic activity in Spain (Salamanca) and from a wild, non-impacted bat community in China (Guangdong). Metagenomic analyses revealed marked differences in taxonomic and resistome composition between sites.

Results: Salamanca samples contained numerous hospital-associated genera (e.g., Mycobacterium, Staphylococcus, Corynebacterium), while Guangdong was dominated by Lactococcus, Aeromonas, and Stenotrophomonas. β-lactamases and MurA transferase homologs were the most abundant ARGs in both datasets, yet Salamanca exhibited higher richness and functional diversity (median Shannon index = 1.5; Simpson = 0.8) than Guangdong (Shannon = 1.1; Simpson = 0.66). Salamanca also showed enrichment of clinically relevant ARGs, including qacG, emrR, bacA, and acrB, conferring resistance to antibiotics critical for human medicine. In contrast, Guangdong exhibited a more restricted resistome dominated by β-lactamase and MurA homologs. Beta diversity analysis confirmed significant compositional differences between resistomes (PERMANOVA, R2 = 0.019, F = 1.33, p = 0.001), indicating ecological rather than stochastic structuring.

Conclusions: These findings suggest that anthropogenic exposure enhances the diversity and evenness of resistance mechanisms within bat-associated microbiomes, potentially increasing their role as reservoirs of antimicrobial resistance.

背景/目的:哺乳动物微生物群构成了抗菌素耐药基因(ARGs)的储存库,可受环境和人为因素的影响。尽管据报道,蝙蝠相关细菌在全球范围内携带多种ARGs,但驱动这种多样性的生态和进化决定因素尚不清楚。方法:为了描述暴露于不同人类影响水平下的野生动物ARG多样性,我们分析了蝙蝠鸟粪霰弹枪宏基因组中综合抗生素耐药性数据库中耐药机制的同源性。样本采集自西班牙(萨拉曼卡)一个暴露于持续人类活动的种群和中国(广东)一个未受影响的野生蝙蝠群落。宏基因组分析显示,不同位点之间的分类和抗性组组成存在显著差异。结果:萨拉曼卡省样本中含有大量的医院相关属(如分枝杆菌、葡萄球菌、棒状杆菌),而广东以乳球菌、气单胞菌和窄养单胞菌为主。β-内酰胺酶和MurA转移酶同源物是两个数据集中最丰富的ARGs,但萨拉曼卡的丰富度和功能多样性(Shannon指数中位数为1.5;Simpson = 0.8)高于广东(Shannon = 1.1; Simpson = 0.66)。Salamanca还显示了临床相关ARGs的富集,包括qacG、emrR、bacA和acrB,赋予对人类医学至关重要的抗生素耐药性。相比之下,广东的抗性组以β-内酰胺酶和MurA同源物为主。Beta多样性分析证实了抗性组的组成差异显著(PERMANOVA, R2 = 0.019, F = 1.33, p = 0.001),表明抗性组是生态结构而非随机结构。结论:这些发现表明,人为暴露增强了蝙蝠相关微生物组耐药机制的多样性和均匀性,潜在地增加了它们作为抗微生物药物耐药性储存库的作用。
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引用次数: 0
Characterization of Salmonella spp. Isolates from European Hedgehogs (Erinaceus europaeus) in Italy: Serotypes and Antimicrobial Susceptibility Profiles. 意大利欧洲刺猬(Erinaceus europaeus)中沙门氏菌分离株的鉴定:血清型和抗生素敏感性分析。
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-01-03 DOI: 10.3390/antibiotics15010046
Sara Barbarulo, Elisa Rampacci, Sara Primavilla, Valentina Stefanetti, Fabrizio Passamonti

Background: Wildlife is increasingly recognized as an important component in the epidemiology of zoonotic pathogens. Salmonella spp., a leading cause of foodborne disease worldwide, can circulate across human, domestic animal, and environmental interfaces. European hedgehogs (Erinaceus europaeus), a synanthropic species frequently inhabiting urban and peri-urban areas, may act as reservoirs or sentinels for Salmonella.

Objectives: The aim of this study was to investigate the prevalence, serotype distribution, and antimicrobial susceptibility profiles of Salmonella spp. isolated from European hedgehogs admitted to wildlife rehabilitation centers in Italy.

Methods: Fecal samples were collected from 100 European hedgehogs housed in five wildlife rehabilitation centers located in four Italian regions. Salmonella spp. were isolated using standard bacteriological methods, serotyped according to the Kaufmann-White-Le Minor scheme, and tested for antimicrobial susceptibility by broth microdilution for ampicillin, enrofloxacin, and sulfamethoxazole-trimethoprim. Minimum inhibitory concentrations (MICs) were interpreted following CLSI guidelines.

Results: Salmonella spp. was isolated from 30% of the animals sampled. Four serovars were identified, with S. Enteritidis (50%) and S. Typhimurium (36.7%) being the most prevalent, followed by S. Agona (10%) and S. Chester (3.3%). Antimicrobial susceptibility testing revealed a high level of susceptibility, with 90% of isolates sensitive to all tested antibiotics. One S. enteritidis strain showed resistance to enrofloxacin and sulfamethoxazole-trimethoprim, while two isolates exhibited intermediate susceptibility to enrofloxacin.

Conclusions: The detection of Salmonella serovars commonly associated with human infections in European hedgehogs highlights the potential role of this species in the ecology of zoonotic Salmonella. Although antimicrobial resistance levels were low, the presence of resistant and intermediate strains underscores the importance of continued surveillance. Despite some limitations related to the study design and sample representativeness, these results support the need for further large-scale investigations, reinforcing the need for integrated One Health surveillance strategies.

背景:野生动物越来越被认为是人畜共患病原体流行病学的重要组成部分。沙门氏菌是世界范围内食源性疾病的主要原因,可通过人类、家畜和环境界面传播。欧洲刺猬(Erinaceus europaeus)是一种经常居住在城市和城郊地区的合生物种,可能充当沙门氏菌的储存库或哨兵。目的:本研究旨在调查意大利野生动物康复中心接收的欧洲刺猬中分离的沙门氏菌的流行程度、血清型分布和抗菌药物敏感性。方法:收集了意大利4个地区5个野生动物康复中心的100只欧洲刺猬的粪便样本。采用标准细菌学方法分离沙门氏菌,按考夫曼-白-勒- Minor方案进行血清分型,用微量肉汤稀释氨苄西林、恩诺沙星和磺胺甲恶唑-甲氧苄啶进行药敏试验。最低抑制浓度(mic)按照CLSI指南进行解释。结果:30%的动物检出沙门氏菌。共检出4种血清型,以肠炎沙门氏菌(50%)和鼠伤寒沙门氏菌(36.7%)最常见,其次是阿戈纳沙门氏菌(10%)和切斯特沙门氏菌(3.3%)。抗菌药物敏感性试验显示高水平的敏感性,90%的分离株对所有测试的抗生素敏感。1株肠炎沙门氏菌对恩诺沙星和磺胺甲恶唑-甲氧苄啶有耐药性,2株对恩诺沙星有中等敏感性。结论:在欧洲刺猬中检测到与人类感染相关的沙门氏菌血清型,突出了该物种在人畜共患沙门氏菌生态学中的潜在作用。虽然抗菌素耐药性水平较低,但耐药菌株和中间菌株的存在强调了继续监测的重要性。尽管与研究设计和样本代表性相关的一些局限性,这些结果支持了进一步大规模调查的必要性,加强了对一体化健康监测策略的需求。
{"title":"Characterization of <i>Salmonella</i> spp. Isolates from European Hedgehogs (<i>Erinaceus europaeus</i>) in Italy: Serotypes and Antimicrobial Susceptibility Profiles.","authors":"Sara Barbarulo, Elisa Rampacci, Sara Primavilla, Valentina Stefanetti, Fabrizio Passamonti","doi":"10.3390/antibiotics15010046","DOIUrl":"https://doi.org/10.3390/antibiotics15010046","url":null,"abstract":"<p><strong>Background: </strong>Wildlife is increasingly recognized as an important component in the epidemiology of zoonotic pathogens. <i>Salmonella</i> spp., a leading cause of foodborne disease worldwide, can circulate across human, domestic animal, and environmental interfaces. European hedgehogs (<i>Erinaceus europaeus</i>), a synanthropic species frequently inhabiting urban and peri-urban areas, may act as reservoirs or sentinels for <i>Salmonella</i>.</p><p><strong>Objectives: </strong>The aim of this study was to investigate the prevalence, serotype distribution, and antimicrobial susceptibility profiles of <i>Salmonella</i> spp. isolated from European hedgehogs admitted to wildlife rehabilitation centers in Italy.</p><p><strong>Methods: </strong>Fecal samples were collected from 100 European hedgehogs housed in five wildlife rehabilitation centers located in four Italian regions. <i>Salmonella</i> spp. were isolated using standard bacteriological methods, serotyped according to the Kaufmann-White-Le Minor scheme, and tested for antimicrobial susceptibility by broth microdilution for ampicillin, enrofloxacin, and sulfamethoxazole-trimethoprim. Minimum inhibitory concentrations (MICs) were interpreted following CLSI guidelines.</p><p><strong>Results: </strong><i>Salmonella</i> spp. was isolated from 30% of the animals sampled. Four serovars were identified, with <i>S.</i> Enteritidis (50%) and <i>S.</i> Typhimurium (36.7%) being the most prevalent, followed by <i>S.</i> Agona (10%) and <i>S.</i> Chester (3.3%). Antimicrobial susceptibility testing revealed a high level of susceptibility, with 90% of isolates sensitive to all tested antibiotics. One <i>S. enteritidis</i> strain showed resistance to enrofloxacin and sulfamethoxazole-trimethoprim, while two isolates exhibited intermediate susceptibility to enrofloxacin.</p><p><strong>Conclusions: </strong>The detection of <i>Salmonella</i> serovars commonly associated with human infections in European hedgehogs highlights the potential role of this species in the ecology of zoonotic <i>Salmonella</i>. Although antimicrobial resistance levels were low, the presence of resistant and intermediate strains underscores the importance of continued surveillance. Despite some limitations related to the study design and sample representativeness, these results support the need for further large-scale investigations, reinforcing the need for integrated One Health surveillance strategies.</p>","PeriodicalId":54246,"journal":{"name":"Antibiotics-Basel","volume":"15 1","pages":""},"PeriodicalIF":4.6,"publicationDate":"2026-01-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146068277","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
First Multi-Facility Antimicrobial Surveillance in Japanese Hospital Wastewater Reveals Spatiotemporal Trends and Source-Specific Environmental Loads. 日本医院废水首次多设施抗菌监测揭示了时空趋势和来源特定的环境负荷。
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-01-03 DOI: 10.3390/antibiotics15010050
Takashi Azuma, Ai Tsukada, Naoki Fujii, Miwa Katagiri, Itaru Nakamura, Hidefumi Shimizu, Keita Tatsuno, Manabu Watanabe, Norio Ohmagari, Nobuaki Matsunaga

Background: Hospitals are recognized as point sources of antimicrobials in urban wastewater systems; however, comprehensive evaluations of their discharge profiles have not yet been conducted. Methods: This study presents a multi-site investigation of residual antimicrobial concentrations in effluents from five general hospitals and a commercial facility in the metropolitan area of Japan. Over a 12-week period (December 2023-March 2024), extensive sampling was conducted. Fifteen antimicrobials from multiple classes were quantified using high-throughput analysis. Results: The results revealed consistently higher concentrations in hospital effluents, particularly for levofloxacin, vancomycin, and ampicillin, than in non-clinical sites. Distinct facility-specific and temporal patterns suggest strong links between local prescribing practices and the effluent composition. Some compounds, such as clarithromycin and minocycline, showed dual contributions from both hospital and commercial sources. Conclusions: These findings highlight the need for source-targeted monitoring and antimicrobial pollution control strategies and provide a foundation for expanding surveillance efforts and informing environmental policies related to antimicrobial resistance (AMR).

背景:医院被认为是城市污水系统中抗菌素的点源;但是,尚未对其放电情况进行全面评价。方法:本研究提出了一个多地点调查残留抗菌药物浓度从五家综合医院和商业设施在日本的大都市区。在12周期间(2023年12月至2024年3月),进行了广泛的抽样。采用高通量分析对多类15种抗菌药物进行定量分析。结果:结果显示,医院废水中的浓度持续高于非临床场所,特别是左氧氟沙星、万古霉素和氨苄西林。不同的设施特定模式和时间模式表明,地方处方做法与污水成分之间存在密切联系。一些化合物,如克拉霉素和米诺环素,显示出医院和商业来源的双重贡献。结论:这些发现突出了对来源进行针对性监测和采取抗微生物药物污染控制策略的必要性,并为扩大监测工作和告知与抗微生物药物耐药性(AMR)相关的环境政策奠定了基础。
{"title":"First Multi-Facility Antimicrobial Surveillance in Japanese Hospital Wastewater Reveals Spatiotemporal Trends and Source-Specific Environmental Loads.","authors":"Takashi Azuma, Ai Tsukada, Naoki Fujii, Miwa Katagiri, Itaru Nakamura, Hidefumi Shimizu, Keita Tatsuno, Manabu Watanabe, Norio Ohmagari, Nobuaki Matsunaga","doi":"10.3390/antibiotics15010050","DOIUrl":"https://doi.org/10.3390/antibiotics15010050","url":null,"abstract":"<p><p><b>Background</b>: Hospitals are recognized as point sources of antimicrobials in urban wastewater systems; however, comprehensive evaluations of their discharge profiles have not yet been conducted. <b>Methods</b>: This study presents a multi-site investigation of residual antimicrobial concentrations in effluents from five general hospitals and a commercial facility in the metropolitan area of Japan. Over a 12-week period (December 2023-March 2024), extensive sampling was conducted. Fifteen antimicrobials from multiple classes were quantified using high-throughput analysis. <b>Results</b>: The results revealed consistently higher concentrations in hospital effluents, particularly for levofloxacin, vancomycin, and ampicillin, than in non-clinical sites. Distinct facility-specific and temporal patterns suggest strong links between local prescribing practices and the effluent composition. Some compounds, such as clarithromycin and minocycline, showed dual contributions from both hospital and commercial sources. <b>Conclusions</b>: These findings highlight the need for source-targeted monitoring and antimicrobial pollution control strategies and provide a foundation for expanding surveillance efforts and informing environmental policies related to antimicrobial resistance (AMR).</p>","PeriodicalId":54246,"journal":{"name":"Antibiotics-Basel","volume":"15 1","pages":""},"PeriodicalIF":4.6,"publicationDate":"2026-01-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146068617","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Timing of Antibiotics in ICU Pneumonia: An Observational Association Between Early Treatment and Higher Mortality. ICU肺炎的抗生素使用时机:早期治疗与高死亡率之间的观察性关联。
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-01-03 DOI: 10.3390/antibiotics15010049
Josef Yayan, Kurt Rasche

Background: Early administration of antibiotics is commonly recommended for pneumonia in intensive care unit (ICU) patients. However, the clinical benefit of very early empirical treatment remains uncertain and may reflect differences in illness severity, baseline risk, or care pathways, particularly in non-septic or hemodynamically stable ICU populations. Methods: We performed a retrospective cohort study using the Medical Information Mart for Intensive Care IV (v2.2) database to evaluate the observational association between antibiotic timing and in-hospital mortality among adult ICU patients with pneumonia. Patients were categorized as receiving early (<3 h) or delayed (≥3 h) antibiotic therapy after ICU admission. A multivariable logistic regression model adjusted only for age and sex. Given the absence of detailed severity-of-illness measures, no causal inference was intended, and all analyses were considered hypothesis-generating. Additional analyses exploring antibiotic class, dosing frequency, and combination therapy were conducted in an exploratory manner, given substantial variation in sample sizes and a high risk of confounding by indication, misclassification, immortal-time, and survivorship bias. Results: Among 7569 ICU patients with pneumonia, 56.5% received antibiotics within three hours of ICU admission. Early antibiotic initiation was associated with higher in-hospital mortality than delayed therapy (26.1% vs. 21.5%; OR 1.30, 95% CI 1.16-1.44; p < 0.001). Because validated severity-of-illness measures were unavailable, residual confounding and confounding by indication are likely and may largely explain this association. A potential signal of increased mortality was observed in patients receiving ≥3 doses of levofloxacin (OR 4.39, 95% CI 1.13-17.02); however, this subgroup was small and the finding is highly susceptible to survivorship and indication bias. Mortality appeared lower in patients receiving two or three antibiotics compared with monotherapy, but marked group imbalances, lack of restriction or stratification, and clinical selection effects limit interpretability. Regimens involving ≥4 agents were rare and primarily associated with prolonged ICU length of stay rather than a clear mortality difference. Conclusions: In this large retrospective ICU cohort, very early antibiotic administration for pneumonia was observationally associated with higher in-hospital mortality. Causality cannot be inferred, and early treatment likely represents a marker of higher baseline risk or clinical urgency rather than a harmful exposure. These findings challenge the assumption that earlier antibiotic initiation is uniformly beneficial and underscore the importance of individualized, stewardship-aligned, and context-dependent decision-making regarding antimicrobial timing and intensity in critically ill patients.

背景:重症监护病房(ICU)肺炎患者通常推荐早期使用抗生素。然而,早期经验性治疗的临床获益仍然不确定,可能反映了疾病严重程度、基线风险或护理途径的差异,特别是在非脓毒症或血流动力学稳定的ICU人群中。方法:我们使用重症监护医学信息市场IV (v2.2)数据库进行了一项回顾性队列研究,以评估ICU成人肺炎患者抗生素使用时间与住院死亡率之间的观察性关联。结果:7569例ICU肺炎患者中,56.5%的患者在入院后3小时内接受了抗生素治疗。早期使用抗生素与延迟治疗相比,住院死亡率更高(26.1%对21.5%;OR 1.30, 95% CI 1.16-1.44; p < 0.001)。由于无法获得有效的疾病严重程度测量,残留混淆和指征混淆很可能在很大程度上解释了这种关联。在接受≥3剂量左氧氟沙星治疗的患者中观察到死亡率增加的潜在信号(OR 4.39, 95% CI 1.13-17.02);然而,这个亚组很小,而且研究结果很容易受到生存和指征偏倚的影响。与单药治疗相比,接受两种或三种抗生素治疗的患者死亡率较低,但明显的组失衡,缺乏限制或分层,临床选择效应限制了可解释性。涉及≥4种药物的方案很少,主要与延长ICU住院时间有关,而不是明显的死亡率差异。结论:在这个大型回顾性ICU队列中,观察到肺炎的早期抗生素治疗与较高的住院死亡率相关。因果关系无法推断,早期治疗可能代表较高的基线风险或临床紧迫性,而不是有害暴露。这些发现挑战了早期开始使用抗生素一致有益的假设,并强调了危重患者在抗菌时间和强度方面个性化、管理一致和情境依赖决策的重要性。
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引用次数: 0
Community Pharmacists' Perspectives on Antibiotic Misuse and Antimicrobial Resistance in Cyprus: A Reflexive Thematic Analysis. 塞浦路斯社区药剂师对抗生素滥用和抗菌素耐药性的看法:反身性专题分析。
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-01-02 DOI: 10.3390/antibiotics15010045
Mark J M Sullman, Timo J Lajunen

Background: Antimicrobial resistance (AMR) is a major global health threat, and Cyprus reports one of the highest levels of community antibiotic consumption in the EU. Despite their central role in antibiotic access and counselling, the stewardship practices and perspectives of community pharmacists in this regulated setting are not well documented. Methods: We conducted semi-structured qualitative interviews with 20 community pharmacists to explore their perspectives on antibiotic use and AMR. Results: We analysed the data using reflexive thematic analysis, revealing five key themes: regulation and control of dispensing; pharmacist-patient interaction and misuse; antimicrobial stewardship and public education; safety and professional responsibility; and systemic barriers. Pharmacists reported strict adherence to prescription-only rules, and described regulation and e-prescribing as a practical 'shield' that legitimised refusals and redirected some misuse from overt non-prescription requests towards attempts to reuse, extend, or 'top up' prior prescriptions and household leftovers. They described managing frequent patient demands for antibiotics for self-limiting conditions and using brief counselling scripts, written aids, and symptomatic alternatives to promote appropriate use. Participants emphasised the risks of antibiotic-related harms, including AMR and other health consequences, while also highlighting workload, access constraints, and communication difficulties as barriers to effective counselling. Overall, the findings indicate that community pharmacists in Cyprus function as front-line antimicrobial stewards. Conclusions: These accounts position community pharmacists in Cyprus as front-line antimicrobial stewards. Policy should consider supporting this function by providing enhanced communication tools, improving access pathways for timely prescriber review (including outside routine hours), and strengthening links between community pharmacy and national AMR action plans.

背景:抗菌素耐药性(AMR)是一个主要的全球健康威胁,塞浦路斯是欧盟社区抗生素消费水平最高的国家之一。尽管他们在抗生素获取和咨询方面发挥着核心作用,但在这种受监管的环境中,社区药剂师的管理实践和观点并没有得到很好的记录。方法:对20名社区药师进行半结构化定性访谈,了解他们对抗生素使用和抗菌素耐药性的看法。结果:采用自反性主题分析方法对数据进行分析,揭示了五个关键主题:调剂监管;药师与患者的互动和误用;抗菌药物管理和公众教育;安全和职业责任;以及系统障碍。药剂师报告严格遵守处方规定,并将监管和电子处方描述为一种实用的“盾牌”,使拒绝合法化,并将一些滥用行为从公开的非处方请求转向试图重复使用、延长或“补充”先前的处方和家庭剩饭剩菜。他们描述了对自限性疾病患者对抗生素的频繁需求进行管理,并使用简短的咨询脚本、书面辅助工具和对症替代方案来促进适当使用。与会者强调抗生素相关危害的风险,包括抗菌素耐药性和其他健康后果,同时也强调工作量、获取限制和沟通困难是有效咨询的障碍。总体而言,研究结果表明,社区药剂师在塞浦路斯的功能作为一线抗菌管理员。结论:这些账户将塞浦路斯的社区药剂师定位为一线抗菌药物管理人员。政策应考虑通过提供加强的沟通工具、改善及时审查处方者的途径(包括在常规时间之外)以及加强社区药房与国家抗菌素耐药性行动计划之间的联系来支持这一功能。
{"title":"Community Pharmacists' Perspectives on Antibiotic Misuse and Antimicrobial Resistance in Cyprus: A Reflexive Thematic Analysis.","authors":"Mark J M Sullman, Timo J Lajunen","doi":"10.3390/antibiotics15010045","DOIUrl":"https://doi.org/10.3390/antibiotics15010045","url":null,"abstract":"<p><p><b>Background:</b> Antimicrobial resistance (AMR) is a major global health threat, and Cyprus reports one of the highest levels of community antibiotic consumption in the EU. Despite their central role in antibiotic access and counselling, the stewardship practices and perspectives of community pharmacists in this regulated setting are not well documented. <b>Methods:</b> We conducted semi-structured qualitative interviews with 20 community pharmacists to explore their perspectives on antibiotic use and AMR. <b>Results:</b> We analysed the data using reflexive thematic analysis, revealing five key themes: regulation and control of dispensing; pharmacist-patient interaction and misuse; antimicrobial stewardship and public education; safety and professional responsibility; and systemic barriers. Pharmacists reported strict adherence to prescription-only rules, and described regulation and e-prescribing as a practical 'shield' that legitimised refusals and redirected some misuse from overt non-prescription requests towards attempts to reuse, extend, or 'top up' prior prescriptions and household leftovers. They described managing frequent patient demands for antibiotics for self-limiting conditions and using brief counselling scripts, written aids, and symptomatic alternatives to promote appropriate use. Participants emphasised the risks of antibiotic-related harms, including AMR and other health consequences, while also highlighting workload, access constraints, and communication difficulties as barriers to effective counselling. Overall, the findings indicate that community pharmacists in Cyprus function as front-line antimicrobial stewards. <b>Conclusions:</b> These accounts position community pharmacists in Cyprus as front-line antimicrobial stewards. Policy should consider supporting this function by providing enhanced communication tools, improving access pathways for timely prescriber review (including outside routine hours), and strengthening links between community pharmacy and national AMR action plans.</p>","PeriodicalId":54246,"journal":{"name":"Antibiotics-Basel","volume":"15 1","pages":""},"PeriodicalIF":4.6,"publicationDate":"2026-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146068523","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Emergence of OXA-48-like Carbapenemase-Producing Escherichia coli in Baranya County, Hungary. 匈牙利巴拉尼亚县产oxa -48样碳青霉烯酶大肠杆菌的出现
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-01-02 DOI: 10.3390/antibiotics15010044
Fatma A Mohamed, Mohamed Al-Bulushi, Szilvia Melegh, Bálint Timmer, Réka Meszéna, Csongor Freytag, Levente Laczkó, László Miló, Péter Urbán, Renáta Bőkényné-Tóth, Attila Gyenesei, Gábor Kardos, Adrienn Nyul, Edit Urbán, Tibor Pál, Ágnes Sonnevend

Background: Carbapenem-resistant Escherichia coli (CREC) producing OXA-48-like carbapenemase was first detected in Hungary in 2022. The aim of the present study was to characterize such strains isolated in 2022-2025 in Baranya County, Hungary. Methods: Antibiotic susceptibility and the whole-genome sequence (WGS) of E. coli isolates, identified as OXA-48-like carbapenemase producers using the CARBA-5 NG test, were established. The transferability of blaOXA-48-like plasmids was tested by conjugation. Results: Of the 6722 non-repeat E. coli isolates, 6 produced an OXA-48-like carbapenemase. They exhibited variable resistance to ertapenem and were susceptible to imipenem and meropenem. WGS revealed that all OXA-48-like producer E. coli belonged to high-risk clones: two clonally related OXA-181-producer E. coli ST405 were isolated in Hospital A, three OXA-244-producing E. coli ST38 (two identical via cgMLST from Hospital B), and an OXA-48-producing E. coli ST69. The blaOXA-48 and blaOXA-244 genes were chromosomally located, while blaOXA-181 was on a non-conjugative IncFIB-IncFIC plasmid. So far, the blaOXA-181-bearing plasmid of this incompatibility type has only been described in Ghana, but all blaOXA-48-like gene-carrying transposons in this study have already been identified in Europe and other continents. The E. coli ST38 isolates, showing close association based on core genome SNP distances to European and Qatari strains, belonged to Cluster A and harbored blaCTX-M-27. All but the E. coli ST69 isolate had cephalosporinase gene(s). Conclusions: This study describes small-scale intra-hospital transfers of OXA-48-like carbapenemase-producer E. coli. Interestingly, E. coli ST405 of Hungary carried blaOXA-181 on an IncFIB-IncFIC plasmid, which has only been reported from Africa so far.

背景:产生oxa -48样碳青霉烯酶的耐碳青霉烯类大肠杆菌(CREC)于2022年在匈牙利首次被检测到。本研究的目的是表征2022-2025年在匈牙利巴拉尼亚县分离的此类菌株。方法:对经CARBA-5 NG试验鉴定为oxa -48样碳青霉烯酶产生菌的大肠杆菌进行抗生素敏感性和全基因组序列(WGS)测定。通过偶联法检测blaoxa -48样质粒的可转移性。结果:6722株非重复大肠杆菌分离株中,6株产生oxa -48样碳青霉烯酶。它们对厄他培南表现出不同的耐药性,对亚胺培南和美罗培南敏感。WGS结果显示,所有oxa -48样生产大肠杆菌均属于高危克隆:A医院分离到2株oxa -181样生产大肠杆菌ST405, B医院分离到3株oxa -244样生产大肠杆菌ST38(2株通过cgMLST鉴定相同)和1株oxa -48样生产大肠杆菌ST69。blaOXA-48和blaOXA-244基因在染色体上定位,而blaOXA-181位于非共轭的IncFIB-IncFIC质粒上。到目前为止,这种不相容型携带blaoxa -181的质粒仅在加纳被发现,但本研究中所有携带blaoxa -48样基因的转座子已经在欧洲和其他大陆被发现。大肠杆菌ST38分离株与欧洲和卡塔尔菌株的核心基因组SNP距离密切相关,属于A群,携带blaCTX-M-27。除大肠杆菌ST69外,其余菌株均含有头孢菌素酶基因。结论:本研究描述了oxa -48样碳青霉烯酶产生者大肠杆菌的小规模院内转移。有趣的是,匈牙利的大肠杆菌ST405在IncFIB-IncFIC质粒上携带blaOXA-181,迄今为止仅在非洲报道过。
{"title":"Emergence of OXA-48-like Carbapenemase-Producing <i>Escherichia coli</i> in Baranya County, Hungary.","authors":"Fatma A Mohamed, Mohamed Al-Bulushi, Szilvia Melegh, Bálint Timmer, Réka Meszéna, Csongor Freytag, Levente Laczkó, László Miló, Péter Urbán, Renáta Bőkényné-Tóth, Attila Gyenesei, Gábor Kardos, Adrienn Nyul, Edit Urbán, Tibor Pál, Ágnes Sonnevend","doi":"10.3390/antibiotics15010044","DOIUrl":"https://doi.org/10.3390/antibiotics15010044","url":null,"abstract":"<p><p><b>Background</b>: Carbapenem-resistant <i>Escherichia coli</i> (CREC) producing OXA-48-like carbapenemase was first detected in Hungary in 2022. The aim of the present study was to characterize such strains isolated in 2022-2025 in Baranya County, Hungary. <b>Methods</b>: Antibiotic susceptibility and the whole-genome sequence (WGS) of <i>E. coli</i> isolates, identified as OXA-48-like carbapenemase producers using the CARBA-5 NG test, were established. The transferability of <i>bla</i><sub>OXA-48-like</sub> plasmids was tested by conjugation. <b>Results</b>: Of the 6722 non-repeat <i>E. coli</i> isolates, 6 produced an OXA-48-like carbapenemase. They exhibited variable resistance to ertapenem and were susceptible to imipenem and meropenem. WGS revealed that all OXA-48-like producer <i>E. coli</i> belonged to high-risk clones: two clonally related OXA-181-producer <i>E. coli</i> ST405 were isolated in Hospital A, three OXA-244-producing <i>E. coli</i> ST38 (two identical via cgMLST from Hospital B), and an OXA-48-producing <i>E. coli</i> ST69. The <i>bla</i><sub>OXA-48</sub> and <i>bla</i><sub>OXA-244</sub> genes were chromosomally located, while <i>bla</i><sub>OXA-181</sub> was on a non-conjugative IncFIB-IncFIC plasmid. So far, the <i>bla</i><sub>OXA-181</sub>-bearing plasmid of this incompatibility type has only been described in Ghana, but all <i>bla</i><sub>OXA-48-like</sub> gene-carrying transposons in this study have already been identified in Europe and other continents. The <i>E. coli</i> ST38 isolates, showing close association based on core genome SNP distances to European and Qatari strains, belonged to Cluster A and harbored <i>bla</i><sub>CTX-M-27.</sub> All but the <i>E. coli</i> ST69 isolate had cephalosporinase gene(s). <b>Conclusions</b>: This study describes small-scale intra-hospital transfers of OXA-48-like carbapenemase-producer <i>E. coli</i>. Interestingly, <i>E. coli</i> ST405 of Hungary carried <i>bla</i><sub>OXA-181</sub> on an IncFIB-IncFIC plasmid, which has only been reported from Africa so far.</p>","PeriodicalId":54246,"journal":{"name":"Antibiotics-Basel","volume":"15 1","pages":""},"PeriodicalIF":4.6,"publicationDate":"2026-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146068557","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Lavandula angustifolia Essential Oil as a Developmental Inhibitor of Candida Species and Biofilms. 薰衣草精油对念珠菌及其生物膜发育的抑制作用。
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-01-01 DOI: 10.3390/antibiotics15010041
Vanessa Bassinello, Marcelo Fabiano Gomes Boriollo, Janaina Priscila Barbosa, Wagner Luís de Carvalho Bernardo, Mateus Cardoso Oliveira, Carlos Tadeu Dos Santos Dias, Cristina Paiva de Sousa

Background: This research aimed to investigate the antifungal and antibiofilm action of Lavandula angustifolia essential oil (LaEO) against certain Candida species and its toxicity on human keratinocytes. Methods: The minimum inhibitory concentration (MIC) and sessile minimum inhibitory concentration (SMIC) of LaEO were both determined by broth microdilution assays. The influence of LaEO treatment on the ultrastructural morphology of the biofilm and germ tubes was evaluated by scanning electron microscopy (SEM) and light microscopy. In vitro cytotoxicity studies were conducted using human HaCaT epidermal keratinocytes. Results: LaEO showed fungicidal action for all Candida species (125-4000 μg/mL). The SMIC>90 (C. albicans) ranged between 10,000 and 20,000 μg/mL and resulted in quantitative and qualitative cellular changes. LaEO also inhibited the developmental germ tube kinetics of C. albicans. The 50% cytotoxic concentration (CI50) for HaCaT cells was estimated at 420 μg/mL of LaEO, resulting in a selectivity index (SI) of 0.376 to 5.753 for planktonic cells and 0.056 to 0.321 for biofilm phases. Conclusions: LaEO was found to have antifungal action against Candida species and inhibited the pathogenic morphology of C. albicans. Its antibiofilm effects are comparable to the antifungal agent nystatin, and it can become an important component for the development of natural products applicable to alternative and complementary medicine and dentistry.

背景:本研究旨在研究薰衣草精油(LaEO)对某些念珠菌的抗真菌和抗膜作用及其对人角质形成细胞的毒性。方法:采用微量肉汤稀释法测定LaEO的最低抑菌浓度(MIC)和固菌最低抑菌浓度(SMIC)。采用扫描电镜(SEM)和光镜观察LaEO处理对生物膜和胚管超微结构形态的影响。体外细胞毒性研究使用人HaCaT表皮角质形成细胞进行。结果:LaEO对所有念珠菌均有杀真菌作用(125 ~ 4000 μg/mL)。SMIC bbb90(白色念珠菌)在10000 ~ 20000 μg/mL范围内,引起细胞定量和定性变化。LaEO还能抑制白色念珠菌的胚管发育动力学。在420 μg/mL LaEO条件下,HaCaT细胞50%的细胞毒浓度(CI50)在浮游细胞和生物膜期分别为0.376 ~ 5.753和0.056 ~ 0.321。结论:LaEO对念珠菌有抗真菌作用,并能抑制白色念珠菌的病原形态。其抗菌作用可与制霉菌素相媲美,可成为开发适用于替代和补充医学及牙科的天然产物的重要组成部分。
{"title":"<i>Lavandula angustifolia</i> Essential Oil as a Developmental Inhibitor of <i>Candida</i> Species and Biofilms.","authors":"Vanessa Bassinello, Marcelo Fabiano Gomes Boriollo, Janaina Priscila Barbosa, Wagner Luís de Carvalho Bernardo, Mateus Cardoso Oliveira, Carlos Tadeu Dos Santos Dias, Cristina Paiva de Sousa","doi":"10.3390/antibiotics15010041","DOIUrl":"https://doi.org/10.3390/antibiotics15010041","url":null,"abstract":"<p><p><b>Background:</b> This research aimed to investigate the antifungal and antibiofilm action of <i>Lavandula angustifolia</i> essential oil (LaEO) against certain <i>Candida</i> species and its toxicity on human keratinocytes. <b>Methods:</b> The minimum inhibitory concentration (MIC) and sessile minimum inhibitory concentration (SMIC) of LaEO were both determined by broth microdilution assays. The influence of LaEO treatment on the ultrastructural morphology of the biofilm and germ tubes was evaluated by scanning electron microscopy (SEM) and light microscopy. In vitro cytotoxicity studies were conducted using human <i>HaCaT</i> epidermal keratinocytes. <b>Results:</b> LaEO showed fungicidal action for all <i>Candida</i> species (125-4000 μg/mL). The SMIC<sub>>90</sub> (<i>C. albicans</i>) ranged between 10,000 and 20,000 μg/mL and resulted in quantitative and qualitative cellular changes. LaEO also inhibited the developmental germ tube kinetics of <i>C. albicans</i>. The 50% cytotoxic concentration (CI<sub>50</sub>) for <i>HaCaT</i> cells was estimated at 420 μg/mL of LaEO, resulting in a selectivity index (SI) of 0.376 to 5.753 for planktonic cells and 0.056 to 0.321 for biofilm phases. <b>Conclusions:</b> LaEO was found to have antifungal action against <i>Candida</i> species and inhibited the pathogenic morphology of <i>C. albicans</i>. Its antibiofilm effects are comparable to the antifungal agent nystatin, and it can become an important component for the development of natural products applicable to alternative and complementary medicine and dentistry.</p>","PeriodicalId":54246,"journal":{"name":"Antibiotics-Basel","volume":"15 1","pages":""},"PeriodicalIF":4.6,"publicationDate":"2026-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146068627","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Functional Characterization of ycao in Escherichia coli C91 Reveals Its Role in Siderophore Production, Iron-Limited Growth, and Antimicrobial Activity. 大肠杆菌C91中草酸的功能表征揭示其在铁载体生产、铁限制生长和抗菌活性中的作用。
IF 4.6 2区 医学 Q1 INFECTIOUS DISEASES Pub Date : 2026-01-01 DOI: 10.3390/antibiotics15010043
Khadijah M Dashti, H Ebrahim, Leila Vali, Ali A Dashti

Background: The emergence of antibiotic-resistant bacteria is one of the top health concerns. Escherichia coli is a Gram-negative bacterium that commonly causes severe infections. However, this research exposed its antibiotic-producing potential.

Methods: Rifampicin-resistant mutants of E. coli C91 were generated to activate cryptic BGCs. Mutants (C91-R1, R2 and R3) were tested for antimicrobial production using agar-well diffusion assays. Metabolite profiling was performed by LC-MS/MS. Siderophore production was tested by construction of a Δycao deletion mutant. Growth of this mutant was assessed under iron-limited conditions versus iron-rich conditions using dipyridyl. qRT-PCR was used to analyze gene expression entB, mcmA and mchF. Genome mining was performed using antiSMASH and BAGEL4.

Results: Compared to the wild type, Mutant C91-R1(S531L) displayed clear antibacterial activity against Staphylococcus aureus. LC-MS/MS revealed unique metabolites, including a novel peak at m/z 410.5, specific to the mutant C91-R1. A reduction in siderophore production of 61% was demonstrated in the Δycao mutant, and downregulation of entB, mcmA and mchF. Conclusions: Genome mining predicted non-ribosomal peptide, thiopeptide and polyketide BGCs. E. coli C91 offers antibiotic-producing potential that can be activated through ribosome-engineering-type approaches. Moreover, E. coli C91-R1 has unique metabolites and is considered as a promising candidate for novel antibiotic discovery.

背景:耐药细菌的出现是最重要的健康问题之一。大肠杆菌是一种革兰氏阴性菌,通常会引起严重感染。然而,这项研究揭示了它生产抗生素的潜力。方法:制备耐利福平突变体,激活隐性bgc。采用琼脂孔扩散法检测突变体(C91-R1, R2和R3)的抗菌产量。采用LC-MS/MS进行代谢物分析。通过构建Δycao缺失突变体来检测铁载体的产生。该突变体在限铁条件和富铁条件下的生长情况用二吡啶进行了评估。采用qRT-PCR方法分析enb、mcmA和mchF基因的表达。使用antiSMASH和BAGEL4进行基因组挖掘。结果:与野生型相比,突变体C91-R1(S531L)对金黄色葡萄球菌具有明显的抑菌活性。LC-MS/MS显示了独特的代谢产物,包括突变体C91-R1特有的m/z 410.5的新峰。在Δycao突变体中,铁载体的产量减少了61%,entB、mcmA和mchF的表达下调。结论:基因组挖掘预测非核糖体肽、硫肽和聚酮类bgc。大肠杆菌C91具有生产抗生素的潜力,可以通过核糖体工程类型的方法激活。此外,大肠杆菌C91-R1具有独特的代谢物,被认为是发现新型抗生素的有希望的候选者。
{"title":"Functional Characterization of <i>ycao</i> in <i>Escherichia coli</i> C91 Reveals Its Role in Siderophore Production, Iron-Limited Growth, and Antimicrobial Activity.","authors":"Khadijah M Dashti, H Ebrahim, Leila Vali, Ali A Dashti","doi":"10.3390/antibiotics15010043","DOIUrl":"https://doi.org/10.3390/antibiotics15010043","url":null,"abstract":"<p><strong>Background: </strong>The emergence of antibiotic-resistant bacteria is one of the top health concerns. <i>Escherichia coli</i> is a Gram-negative bacterium that commonly causes severe infections. However, this research exposed its antibiotic-producing potential.</p><p><strong>Methods: </strong>Rifampicin-resistant mutants of <i>E. coli</i> C91 were generated to activate cryptic BGCs. Mutants (C91-R1, R2 and R3) were tested for antimicrobial production using agar-well diffusion assays. Metabolite profiling was performed by LC-MS/MS. Siderophore production was tested by construction of a Δ<i>ycao</i> deletion mutant. Growth of this mutant was assessed under iron-limited conditions versus iron-rich conditions using dipyridyl. qRT-PCR was used to analyze gene expression <i>entB</i>, <i>mcmA</i> and <i>mchF</i>. Genome mining was performed using antiSMASH and BAGEL4.</p><p><strong>Results: </strong>Compared to the wild type, Mutant C91-R1(S531L) displayed clear antibacterial activity against <i>Staphylococcus aureus</i>. LC-MS/MS revealed unique metabolites, including a novel peak at <i>m</i>/<i>z</i> 410.5, specific to the mutant C91-R1. A reduction in siderophore production of 61% was demonstrated in the Δ<i>ycao</i> mutant, and downregulation of <i>entB</i>, <i>mcmA</i> and <i>mchF.</i> Conclusions: Genome mining predicted non-ribosomal peptide, thiopeptide and polyketide BGCs. <i>E. coli</i> C91 offers antibiotic-producing potential that can be activated through ribosome-engineering-type approaches. Moreover, <i>E. coli</i> C91-R1 has unique metabolites and is considered as a promising candidate for novel antibiotic discovery.</p>","PeriodicalId":54246,"journal":{"name":"Antibiotics-Basel","volume":"15 1","pages":""},"PeriodicalIF":4.6,"publicationDate":"2026-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146068574","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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