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In vivo brain MRS at a 1.5T clinical scanner: Optimized derivative fast Fourier transform for high-resolution spectra from time signals encoded with and without water suppression 在 1.5T 临床扫描仪上进行活体脑 MRS 扫描:优化衍生快速傅立叶变换,从有水抑制和无水抑制的时间信号编码中获得高分辨率光谱
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-03-22 DOI: 10.1007/s10910-024-01597-6
Dževad Belkić, Karen Belkić

We study single-voxel in vivo proton magnetic resonance spectroscopy (MRS) of white matter in the brain of a 25 year old healthy male volunteer. The free induction decay (FID) data of short length (0.5KB) are encoded at a long echo time (272 ms) with and without water suppression at a clinical scanner of a weak magnetic field (1.5T). For these FIDs, the fast Fourier transform (FFT) gives sparse, rough and metabolically uninformative spectra. In such spectra, resolution and signal to noise ratio (SNR) are poor. Exponential or Gaussian filters applied to the FIDs can improve SNR in the FFT spectra, but only at the expense of the worsened resolution. This impacts adversely on in vivo MRS for which both resolution and SNR of spectra need to be very good or excellent, without necessarily resorting to stronger magnetic fields. Such a long sought goal is at last within reach by means of the optimized derivative fast Fourier transform (dFFT), which dramatically outperforms the FFT in every facet of signal estimations. The optimized dFFT simultaneously improves resolution and SNR in derivative spectra. They are presently shown to be of comparably high quality irrespective of whether water is suppressed or not in the course of FID encodings. The ensuing benefits of utmost relevance in the clinic include a substantial shortening of the patient examination time. The implied significantly better cost-effectiveness should make in vivo MRS at low-field clinical scanners (1.5T) more affordable to ever larger circles of hospitals worldwide.

我们研究了一名 25 岁健康男性志愿者脑白质的单体素活体质子磁共振波谱(MRS)。在弱磁场(1.5T)的临床扫描仪上,对长度较短(0.5KB)的自由感应衰减(FID)数据进行了长回波时间(272 毫秒)编码,其中有水抑制和无水抑制。对于这些 FID,快速傅立叶变换(FFT)给出了稀疏、粗糙和无代谢信息的频谱。在这种光谱中,分辨率和信噪比(SNR)都很低。对 FID 进行指数或高斯滤波可提高 FFT 光谱的信噪比,但代价是分辨率降低。这对活体 MRS 有不利影响,因为对于活体 MRS 来说,光谱的分辨率和信噪比都需要非常好或出色,而不一定要使用更强的磁场。通过优化的导数快速傅里叶变换(dFFT),这一长期追求的目标终于可以实现了,dFFT 在信号估计的各个方面都大大优于 FFT。优化的 dFFT 同时提高了导数频谱的分辨率和信噪比。目前的研究表明,无论在 FID 编码过程中是否抑制了水分,它们的质量都相当高。由此带来的临床最大好处包括大大缩短了病人的检查时间。由于成本效益明显提高,全世界越来越多的医院都能负担得起在低场临床扫描仪(1.5T)上进行的活体 MRS 扫描。
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引用次数: 0
On the thermal properties of pure and defective Ψ-graphene nanotubes by molecular dynamics simulations 通过分子动力学模拟研究纯Ψ-石墨烯纳米管和缺陷Ψ-石墨烯纳米管的热特性
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-03-21 DOI: 10.1007/s10910-024-01588-7
Pingfang Yuan, Zhenfeng Liu, Yanxin Xie, Yafei Meng, Mengdie Li, Keke Chen

The effect of defects on the thermal properties of Ψ-Graphene Nanotubes (Ψ-GNTs) is investigated in this study using Molecular Dynamics simulations. The results reveal that the thermal properties of Ψ-GNTs are profoundly impacted by the presence of defects. Specifically, a significant reduction in thermal conductivity is observed with increasing defect concentrations. This reduction is attributed to the scattering of phonons by the defects, which leads to increased phonon–phonon interactions and decreased thermal transport efficiency. Furthermore, the effect of temperature on the thermal properties of defective Ψ-GNTs is investigated. The findings demonstrate a nonlinear decrease in thermal conductivity with increasing temperature.

本研究利用分子动力学模拟研究了缺陷对Ψ-石墨烯纳米管(Ψ-GNTs)热特性的影响。研究结果表明,缺陷的存在对Ψ-石墨烯纳米管的热特性产生了深远的影响。具体来说,随着缺陷浓度的增加,热导率会显著降低。这种降低可归因于缺陷对声子的散射,从而导致声子-声子相互作用的增加和热传输效率的降低。此外,还研究了温度对缺陷Ψ-GNT 热特性的影响。研究结果表明,随着温度的升高,热导率呈非线性下降。
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引用次数: 0
Numerical approach for time-fractional Burgers’ equation via a combination of Adams–Moulton and linearized technique 结合亚当斯-莫尔顿和线性化技术的时间分数布尔格斯方程数值方法
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-03-18 DOI: 10.1007/s10910-024-01589-6
Yonghyeon Jeon, Sunyoung Bu

Recently, fractional derivatives have become increasingly important for describing phenomena occurring in science and engineering fields. In this paper, we consider a numerical method for solving the fractional Burgers’ equations (FBEs), a vital topic in fractional partial differential equations. Due to the difficulty of the fractional derivatives, the nonlinear FBEs are linearized through the Rubin–Graves linearization scheme combined with the implicit the third-order Adams–Moulton scheme. Additionally, in the spatial direction of the FBEs, the fourth-order central finite difference scheme is used to obtain more accurate solutions. The convergence of the proposed scheme is theoretically and numerically analyzed. Also, the efficiency is demonstrated through several numerical experiments and compared with that of existing methods.

近年来,分数导数在描述科学和工程领域的现象方面变得越来越重要。本文研究了求解分数伯格斯方程(FBE)的数值方法,这是分数偏微分方程的一个重要课题。由于分数导数的难度,非线性 FBE 通过 Rubin-Graves 线性化方案结合隐式三阶 Adams-Moulton 方案进行线性化。此外,在 FBE 的空间方向上,采用了四阶中心有限差分方案,以获得更精确的解。对所提方案的收敛性进行了理论和数值分析。同时,通过几个数值实验证明了其效率,并与现有方法进行了比较。
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引用次数: 0
Improved rotating Kratzer–Fues oscillator: eigenenergies, eigenfunctions, coherent states and ladder operators 改进的旋转克拉策-福斯振荡器:特征能、特征函数、相干态和梯形算子
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-03-16 DOI: 10.1007/s10910-024-01585-w
Marcin Molski

Exact analytical energy formula for the rotating Kratzer–Fues oscillator with (vJ)-dependent potential parameters is obtained. It was used to reproduce the spectral data generated by the vibrational transitions (vrightarrow v+1, v=0, 1 ldots 7) in (J=0,1ldots 47) rotational states of dinitrogen (^{14})N(_2) and (^{15})N(_2) in the ground electronic state (X^1Sigma _g^+). Calculations performed for two isotopic variants enabled the selection of the mass-dependent and independent potential parameters defining the model. To check the ability of the eigenenergies derived to reproduce rotational transitions measured with kHz accuracy, calculations for (^{74})Ge(^{32})S, (^{79})Br(^{35})Cl and (^{1})H(^{35})Cl were performed, obtaining agreement between theoretical and experimental results. Minimum uncertainty coherent states and ladder operators for the rotating improved Kratzer–Fues oscillator are also constructed.

获得了具有(v, J)相关势参数的旋转克拉策-富斯振荡器的精确分析能量公式。它被用于重现二氮旋转态(J=0,1ldots 47)中的振动跃迁(vrightarrow v+1, v=0, 1 ldots 7)和基态电子态(X^1Sigma _g^+)中的振动跃迁((^{14})N(_2)和(^{15})N(_2))所产生的光谱数据。通过对两种同位素变体的计算,可以选择定义模型的与质量相关的独立电势参数。为了检验推导出的特征能重现以千赫精度测量的旋转转变的能力,对 (^{74})Ge(^{32})S, (^{79})Br(^{35})Cl 和 (^{1})H(^{35})Cl 进行了计算,在理论和实验结果之间取得了一致。此外,还构建了旋转改进克拉策-富斯振荡器的最小不确定性相干态和梯算子。
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引用次数: 0
Correction: Why are the local hyper-softness and the local softness more appropriate local reactivity descriptors than the dual descriptor and the Fukui function, respectively? 更正:为什么局部超软度和局部软度分别比对偶描述符和福井函数更适合作为局部反应性描述符?
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-03-15 DOI: 10.1007/s10910-024-01613-9
Jorge I. Martínez-Araya
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引用次数: 0
Efficient approximation of solution derivatives for system of singularly perturbed time-dependent convection-diffusion PDEs on Shishkin mesh Shishkin 网格上奇异扰动时变对流扩散 PDE 系统求解导数的高效近似方法
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-03-14 DOI: 10.1007/s10910-024-01587-8
Sonu Bose, Kaushik Mukherjee

This article deals with a coupled system of singularly perturbed convection-diffusion parabolic partial differential equations (PDEs) possessing overlapping boundary layers. As the thickness of the layer shrinks for small diffusion parameter, efficient capturing of the solution and the diffusive flux (i.e., scaled first-order spatial derivative of the solution) leads to a difficult task. It is well-known that the classical numerical techniques have deficiencies in estimating the solution and the diffusive flux on equidistant mesh unless the mesh-size is adequately large. We aim to generate an efficient numerical approximation to the coupled system of PDEs by employing the implicit-Euler method in time and a classical finite difference scheme in space on a layer-adapted Shishkin mesh. Firstly, we discuss about parameter-uniform convergence of the numerical solution in (C^0)-norm followed by the error analysis for the scaled discrete space derivative and the discrete time derivative. Subsequently, the parameter-uniform error bound is established in weighted (C^1)-norm for global approximation to the solution and the space-time solution derivatives. The theoretical findings are verified by generating the numerical results for two test examples.

本文讨论了一个具有重叠边界层的奇异扰动对流-扩散抛物线偏微分方程耦合系统。当扩散参数较小时,层的厚度会缩小,因此有效捕捉解和扩散通量(即解的一阶空间导数)是一项艰巨的任务。众所周知,经典数值技术在估计等距网格上的解和扩散通量时存在缺陷,除非网格尺寸足够大。我们的目标是通过在层适配 Shishkin 网格上采用时间上的隐式欧拉法和空间上的经典有限差分方案,对耦合 PDE 系统进行高效的数值逼近。首先,我们讨论了数值解在 (C^0)-norm 条件下的参数均匀收敛性,然后对比例离散空间导数和离散时间导数进行了误差分析。随后,为全局近似解和时空解导数建立了加权(C^1)规范下的参数均匀误差约束。通过生成两个测试实例的数值结果验证了理论结论。
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引用次数: 0
Fourth-order energy-preserving time integrator for solving the sine-Gordon equation 用于求解正弦-戈登方程的四阶能量守恒时间积分器
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-03-14 DOI: 10.1007/s10910-024-01586-9
Bo Jiang, Changna Lu, Yonglei Fang

In this paper, a fourth-order energy-preserving time integrator is derived by improving the classical average vector field integrator. Combining the proposed novel time integrator with the Fourier pseudo-spectral spatial discretisation, we develop and analyze an energy-preserving fully discrete scheme for the sine-Gordon equation with periodic boundary conditions. Numerical results verify the energy preservation and the accuracy of the proposed fully discrete scheme.

本文通过改进经典的平均矢量场积分器,推导出一种四阶能量守恒时间积分器。将所提出的新型时间积分器与傅立叶伪谱空间离散化相结合,我们开发并分析了具有周期性边界条件的正弦-戈登方程的能量守恒全离散方案。数值结果验证了所提出的全离散方案的能量守恒和精确性。
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引用次数: 0
Isomer number patterns in aromatic hydrocarbon chemistry: the numbers speak for themselves 芳香烃化学中的同分异构体数量模式:数字说话
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-03-14 DOI: 10.1007/s10910-024-01579-8
Jerry Ray Dias

The unique organizational framework for polycyclic aromatic hydrocarbons developed by us has led to the discovery of number patterns for their number of isomers. Constant-isomer series are generated by repetitive circumscribing of a given set of isomers. Benzenoid, fluoranthenoid, indacenoid, and primitive coronoid constant isomer series possess twin isomer numbers with members having corresponding topologies. The concepts of strictly pericondensed, strain-free, Clar’s aromatic sextet, and symmetry are interconnected in the topological correspondence between strictly pericondensed and total resonant sextet (TRS) benzenoid hydrocarbons. In a plot of TRS isomer numbers on the Formula Periodic Table for Total Resonant Sextet Benzenoids [Table PAH6(TRS)] which is a subset of Table PAH6 for ordinary benzenoids, structural correlations in isomer numbers, symmetry distributions, and empty rings between various strain-free TRS benzenoids are presented. These chemical graph theoretical results belong to the branch of mathematics called number theory.

我们开发的多环芳香烃的独特组织框架,发现了其同分异构体的数量模式。恒定异构体系列是由一组给定的异构体重复环绕产生的。苯环、氟环、茚环和原始冠环恒定异构体系列具有孪生异构体数,其成员具有相应的拓扑结构。严格过冷缩、无应变、克拉芳香六元组和对称性等概念在严格过冷缩和全共振六元组(TRS)苯类碳氢化合物的拓扑对应关系中相互关联。在全共振六元组苯碳氢化合物公式周期表 [表 PAH6(TRS)](普通苯碳氢化合物表 PAH6 的子集)上绘制的 TRS 异构体数图中,显示了各种无应变 TRS 苯碳氢化合物之间在异构体数、对称性分布和空环方面的结构相关性。这些化学图论结果属于被称为数论的数学分支。
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引用次数: 0
Bonding alkane attributes with topological indices: a statistical intervention 用拓扑指数键合烷烃属性:统计干预
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-03-10 DOI: 10.1007/s10910-024-01584-x
Nadar Jenita Mary Masilamani Raja, A. Anuradha

This research delves into a comprehensive investigation of a specific group of alkanes, with the primary objective of establishing meaningful associations between their inherent physical attributes and a set of graphical parameters ranging from topological indices to their associated graphical entropies. Though there are countless techniques to relate molecular structure and physical properties of chemical compounds, the pursuit has often been pricey and arduous. With a view to curb the expense and intense labour, this work focuses on attaining some of these properties using graphical interpretations and statistical interventions. Driven by this objective, we compute Sombor index, a recently developed topological tool and some of its variants for all structural isomers of alkanes with carbon range four to nine. Furthermore, our study employs multiple regression analysis to explore their connections with some physical attributes of alkanes while concurrently addressing the challenge posed by multicollinearity. We have adopted the technique of robust regression to scale down the impact of outliers in the dataset, while generating regression models. Further, the established results are justified with a 10-fold cross validation process and a comparison with the results obtained from different topological indices. The results of this research contribute a valuable insight to the fields of chemical informatics and structural analysis, offering an enhanced comprehension of the interplay between molecular structure and physical attributes within alkanes.

这项研究对一组特定的烷烃进行了全面调查,主要目的是在它们固有的物理属性和一系列图形参数(从拓扑指数到相关的图形熵)之间建立有意义的联系。尽管将化合物的分子结构和物理特性联系起来的技术不胜枚举,但这种研究往往既昂贵又艰苦。为了降低成本和减少劳动强度,这项工作的重点是利用图形解释和统计干预来获得其中的一些特性。在这一目标的驱动下,我们计算了 Sombor 指数(一种最新开发的拓扑工具)及其一些变体,适用于碳原子范围为 4 到 9 的所有烷烃结构异构体。此外,我们的研究还采用了多元回归分析方法来探索它们与烷烃某些物理属性之间的联系,同时解决了多重共线性带来的挑战。在生成回归模型时,我们采用了稳健回归技术来降低数据集中异常值的影响。此外,通过 10 倍交叉验证过程以及与不同拓扑指数得出的结果进行比较,证明了所建立的结果是正确的。这项研究成果为化学信息学和结构分析领域提供了宝贵的见解,使人们能够更好地理解烷烃的分子结构和物理属性之间的相互作用。
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引用次数: 0
Adaptive second derivative multistep methods for solving stiff chemical problems 解决僵化化学问题的自适应二阶导数多步法
IF 1.7 3区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2024-03-08 DOI: 10.1007/s10910-024-01582-z
Mozhgan Eghbaljoo, Gholamreza Hojjati, Ali Abdi

In this paper, we introduce one-parameter families of multistep numerical methods for solving stiff initial value problems of ordinary differential equations. These methods are adaptive versions of second derivative backward differentiation formulas and their extensions. The stability properties of the proposed schemes are better than those of the main methods which make them suitable for solving stiff problems. Numerical experiments on some problems arising from chemical reactions verify the theoretical results.

摘要 本文介绍了求解常微分方程刚性初值问题的多步数值方法的单参数族。这些方法是二阶导数反向微分公式及其扩展公式的自适应版本。所提方案的稳定性优于主要方法,因此适用于解决刚性问题。对一些化学反应问题的数值实验验证了理论结果。
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引用次数: 0
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Journal of Mathematical Chemistry
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