Salmonella, a zoonotic pathogen, significantly impacts global human health. Understanding its serotype distribution and antimicrobial resistance is crucial for effective control measures and medical interventions.
Methods
We collected Salmonella isolates and demographic data from Taiwanese hospitals between 2004 and 2022, analyzing their serotypes and antimicrobial susceptibility.
Results
Among 40,595 isolates, salmonellosis predominated in children aged 0-4 (61.2%) years and among males (55.2%). Males also showed higher rates of extraintestinal infections (18.1% vs 16.0%, P <0.001), particularly, in the ≥65 years age group (52.4%). The top five serovars were S. Enteritidis (32.8%), S. Typhimurium (21.7%), S. Newport (6.2%), S. Stanley (4.7%), and S. Anatum (4.0%). Notably, S. Enteritidis prevalence increased from 23.9% (2004-2005) to 43.6% (2021-2022). Antimicrobial resistance was high, with a 51.6% multidrug resistance (MDR) rate. Disturbingly, MDR rates exceeded 90% in serovars Albany, Schwarzengrund, Choleraesuis, and Goldcoast. Resistance to key therapeutic agents, azithromycin, cefotaxime, and ciprofloxacin, exhibited concerning upward trends, and the surge in cefotaxime and ciprofloxacin resistance was closely linked to the emergence and spread of MDR S. Anatum and S. Goldcoast clones.
Conclusions
Prioritizing control measures against S. Enteritidis and closely monitoring the prevalence and spread of MDR clones are imperative to mitigate Salmonella infections in Taiwan.
目的沙门氏菌是人畜共患的病原体,对全球人类健康有重大影响。方法 我们收集了 2004 年至 2022 年期间台湾医院的沙门氏菌分离物和人口统计学数据,分析了其血清型和抗菌药敏感性。男性肠外感染率也较高(18.1% vs 16.0%,P <0.001),尤其是在≥65 岁年龄组中(52.4%)。排在前五位的血清型分别是肠炎双球菌(32.8%)、鼠伤寒双球菌(21.7%)、新港肠炎双球菌(6.2%)、斯坦利肠炎双球菌(4.7%)和阿纳图肠炎双球菌(4.0%)。值得注意的是,肠炎双球菌的流行率从 23.9%(2004-2005 年)增至 43.6%(2021-2022 年)。抗菌药耐药性很高,耐多药(MDR)率为 51.6%。令人不安的是,阿尔巴尼、Schwarzengrund、Choleraesuis 和 Goldcoast 等血清型的 MDR 率超过 90%。对主要治疗药物阿奇霉素、头孢他啶和环丙沙星的耐药性呈现出令人担忧的上升趋势,头孢他啶和环丙沙星耐药性的激增与 MDR S. Anatum 和 S. Goldcoast 克隆的出现和传播密切相关。
{"title":"Epidemiological trends in serotypes distribution and antimicrobial resistance in Salmonella from humans in Taiwan, 2004-2022","authors":"Ying-Shu Liao , Tsai-Ling Lauderdale , Jui-Hsien Chang , Shiu-Yun Liang , Chi-Sen Tsao , Hsiao Lun Wei , You-Wun Wang , Ru-Hsiou Teng , Yu-Ping Hong , Bo-Han Chen , Chien-Shun Chiou","doi":"10.1016/j.ijregi.2024.100372","DOIUrl":"https://doi.org/10.1016/j.ijregi.2024.100372","url":null,"abstract":"<div><h3>Objectives</h3><p><em>Salmonella</em>, a zoonotic pathogen, significantly impacts global human health. Understanding its serotype distribution and antimicrobial resistance is crucial for effective control measures and medical interventions.</p></div><div><h3>Methods</h3><p>We collected <em>Salmonella</em> isolates and demographic data from Taiwanese hospitals between 2004 and 2022, analyzing their serotypes and antimicrobial susceptibility.</p></div><div><h3>Results</h3><p>Among 40,595 isolates, salmonellosis predominated in children aged 0-4 (61.2%) years and among males (55.2%). Males also showed higher rates of extraintestinal infections (18.1% vs 16.0%, <em>P</em> <0.001), particularly, in the ≥65 years age group (52.4%). The top five serovars were <em>S.</em> Enteritidis (32.8%), <em>S.</em> Typhimurium (21.7%), <em>S.</em> Newport (6.2%), <em>S.</em> Stanley (4.7%), and <em>S.</em> Anatum (4.0%). Notably, <em>S</em>. Enteritidis prevalence increased from 23.9% (2004-2005) to 43.6% (2021-2022). Antimicrobial resistance was high, with a 51.6% multidrug resistance (MDR) rate. Disturbingly, MDR rates exceeded 90% in serovars Albany, Schwarzengrund, Choleraesuis, and Goldcoast. Resistance to key therapeutic agents, azithromycin, cefotaxime, and ciprofloxacin, exhibited concerning upward trends, and the surge in cefotaxime and ciprofloxacin resistance was closely linked to the emergence and spread of MDR <em>S.</em> Anatum and <em>S.</em> Goldcoast clones.</p></div><div><h3>Conclusions</h3><p>Prioritizing control measures against <em>S</em>. Enteritidis and closely monitoring the prevalence and spread of MDR clones are imperative to mitigate <em>Salmonella</em> infections in Taiwan.</p></div>","PeriodicalId":73335,"journal":{"name":"IJID regions","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2772707624000432/pdfft?md5=2122a611279035093580883d57ea169a&pid=1-s2.0-S2772707624000432-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140951674","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-25DOI: 10.1016/j.ijregi.2024.100371
Wali Ghassan , Alraddadi Basem , Albayat Hawra , Alharbi Ahmad , Abdulrahman Ahmed Hasan Muaddi , Asma Mestouri , Rezk Elaraby , James Mahon
Objectives
The emergence of resistance to antiretroviral therapy (ART) has an impact on the cost of HIV care. This study aimed to estimate the direct and indirect costs associated with the first episode of drug resistance in individuals with HIV receiving first-line ART.
Methods
We developed a cost calculator to estimate the cost of drug resistance over a period of 12 months in the Kingdom of Saudi Arabia. The model inputs (estimated using expert opinion and publicly available sources) included costs associated with testing for resistance, adverse events of a new regimen, and indirect costs.
Results
The direct and indirect medical expenses for the year resistance developed were 6980 Saudi Arabian riyal (SAR) and SAR 2862, respectively. The addition of the cost of new ARTs would increase the total annual costs (between SAR 5174 and SAR 34,265 per patient). One-way sensitivity analysis also reported significant impact of initial and switching therapies used after resistance develops on the total costs of resistance per year.
Conclusions
There is a significant cost burden associated with drug resistance, which emphasizes the need to select an appropriate initial ART regimen that has a strong genetic barrier and conduct pre-treatment resistance tests (if possible).
{"title":"Estimating the cost due to resistance against antiretroviral therapies in individuals with HIV: Perspective of the Kingdom of Saudi Arabia","authors":"Wali Ghassan , Alraddadi Basem , Albayat Hawra , Alharbi Ahmad , Abdulrahman Ahmed Hasan Muaddi , Asma Mestouri , Rezk Elaraby , James Mahon","doi":"10.1016/j.ijregi.2024.100371","DOIUrl":"10.1016/j.ijregi.2024.100371","url":null,"abstract":"<div><h3>Objectives</h3><p>The emergence of resistance to antiretroviral therapy (ART) has an impact on the cost of HIV care. This study aimed to estimate the direct and indirect costs associated with the first episode of drug resistance in individuals with HIV receiving first-line ART.</p></div><div><h3>Methods</h3><p>We developed a cost calculator to estimate the cost of drug resistance over a period of 12 months in the Kingdom of Saudi Arabia. The model inputs (estimated using expert opinion and publicly available sources) included costs associated with testing for resistance, adverse events of a new regimen, and indirect costs.</p></div><div><h3>Results</h3><p>The direct and indirect medical expenses for the year resistance developed were 6980 Saudi Arabian riyal (SAR) and SAR 2862, respectively. The addition of the cost of new ARTs would increase the total annual costs (between SAR 5174 and SAR 34,265 per patient). One-way sensitivity analysis also reported significant impact of initial and switching therapies used after resistance develops on the total costs of resistance per year.</p></div><div><h3>Conclusions</h3><p>There is a significant cost burden associated with drug resistance, which emphasizes the need to select an appropriate initial ART regimen that has a strong genetic barrier and conduct pre-treatment resistance tests (if possible).</p></div>","PeriodicalId":73335,"journal":{"name":"IJID regions","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-04-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2772707624000420/pdfft?md5=3df1fe992fedadb63ef424e3431f8c6b&pid=1-s2.0-S2772707624000420-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140776898","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-25DOI: 10.1016/j.ijregi.2024.100370
Meher Rizvi , Shalini Malhotra , Jyotsna Agarwal , Areena H. Siddiqui , Sheela Devi , Aruna Poojary , Bhaskar Thakuria , Isabella Princess , Hiba Sami , Aarti Gupta , Asfia Sultan , Ashish Jitendranath , Balvinder Mohan , Gunjiganur Shankarappa Banashankari , Fatima Khan , Juri Bharat Kalita , Mannu Jain , Narendra Pal Singh , Renu Gur , Sarita Mohapatra , David M. Livermore
Objectives
Evidence-based prescribing is essential to optimize patient outcomes in cystitis. This requires knowledge of local antibiotic resistance rates. Diagnostic and Antimicrobial Stewardship (DASH) to Protect Antibiotics (https://dashuti.com/) is a multicentric mentorship program guiding centers in preparing, analyzing and disseminating local antibiograms to promote antimicrobial stewardship in community urinary tract infection. Here, we mapped the susceptibility profile of Escherichia coli from 22 Indian centers.
Methods
These centers spanned 10 Indian states and three union territories. Antibiograms for urinary E. coli from the outpatient departments were collated. Standardization was achieved by regional online training; anomalies were resolved via consultation with study experts. Data were collated and analyzed.
Results
Nationally, fosfomycin, with 94% susceptibility (inter-center range 83-97%), and nitrofurantoin, with 85% susceptibility (61-97%), retained the widest activity. The susceptibility rates were lower for co-trimoxazole (49%), fluoroquinolones (31%), and oral cephalosporins (26%). The rates for third- and fourth-generation cephalosporins were 46% and 52%, respectively, with 54% (33-58%) extended-spectrum β-lactamase prevalence. Piperacillin-tazobactam (81%), amikacin (88%), and meropenem (88%) retained better activity; however, one center in Delhi recorded only 42% meropenem susceptibility. Susceptibility rates were mostly higher in South, West, and Northeast India; centers in the heavily populated Gangetic plains, across north and northwest India, had greater resistance. These findings highlight the importance of local antibiograms in guiding appropriate antimicrobial choices.
Conclusions
Fosfomycin and nitrofurantoin are the preferred oral empirical choices for uncomplicated E. coli cystitis in India, although elevated resistance in some areas is concerning. Empiric use of fluoroquinolones and third-generation cephalosporins is discouraged, whereas piperacillin/tazobactam and aminoglycosides remain carbapenem-sparing parenteral agents.
{"title":"Regional variations in antimicrobial susceptibility of community-acquired uropathogenic Escherichia coli in India: Findings of a multicentric study highlighting the importance of local antibiograms","authors":"Meher Rizvi , Shalini Malhotra , Jyotsna Agarwal , Areena H. Siddiqui , Sheela Devi , Aruna Poojary , Bhaskar Thakuria , Isabella Princess , Hiba Sami , Aarti Gupta , Asfia Sultan , Ashish Jitendranath , Balvinder Mohan , Gunjiganur Shankarappa Banashankari , Fatima Khan , Juri Bharat Kalita , Mannu Jain , Narendra Pal Singh , Renu Gur , Sarita Mohapatra , David M. Livermore","doi":"10.1016/j.ijregi.2024.100370","DOIUrl":"10.1016/j.ijregi.2024.100370","url":null,"abstract":"<div><h3>Objectives</h3><p>Evidence-based prescribing is essential to optimize patient outcomes in cystitis. This requires knowledge of local antibiotic resistance rates. Diagnostic and Antimicrobial Stewardship (DASH) to Protect Antibiotics (<span>https://dashuti.com/</span><svg><path></path></svg>) is a multicentric mentorship program guiding centers in preparing, analyzing and disseminating local antibiograms to promote antimicrobial stewardship in community urinary tract infection. Here, we mapped the susceptibility profile of <em>Escherichia coli</em> from 22 Indian centers.</p></div><div><h3>Methods</h3><p>These centers spanned 10 Indian states and three union territories. Antibiograms for urinary <em>E. coli</em> from the outpatient departments were collated. Standardization was achieved by regional online training; anomalies were resolved via consultation with study experts. Data were collated and analyzed.</p></div><div><h3>Results</h3><p>Nationally, fosfomycin, with 94% susceptibility (inter-center range 83-97%), and nitrofurantoin, with 85% susceptibility (61-97%), retained the widest activity. The susceptibility rates were lower for co-trimoxazole (49%), fluoroquinolones (31%), and oral cephalosporins (26%). The rates for third- and fourth-generation cephalosporins were 46% and 52%, respectively, with 54% (33-58%) extended-spectrum β-lactamase prevalence. Piperacillin-tazobactam (81%), amikacin (88%), and meropenem (88%) retained better activity; however, one center in Delhi recorded only 42% meropenem susceptibility. Susceptibility rates were mostly higher in South, West, and Northeast India; centers in the heavily populated Gangetic plains, across north and northwest India, had greater resistance. These findings highlight the importance of local antibiograms in guiding appropriate antimicrobial choices.</p></div><div><h3>Conclusions</h3><p>Fosfomycin and nitrofurantoin are the preferred oral empirical choices for uncomplicated <em>E. coli</em> cystitis in India, although elevated resistance in some areas is concerning. Empiric use of fluoroquinolones and third-generation cephalosporins is discouraged, whereas piperacillin/tazobactam and aminoglycosides remain carbapenem-sparing parenteral agents.</p></div>","PeriodicalId":73335,"journal":{"name":"IJID regions","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-04-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2772707624000419/pdfft?md5=d408d56255d5a172acaf3623fde4ea00&pid=1-s2.0-S2772707624000419-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140778139","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-25DOI: 10.1016/j.ijregi.2024.100369
Rubaiya Binte Kabir , Tasnim Ahsan , Md. Faizur Rahman , Mohammad Jobayer , SM Shamsuzzaman
Objectives
Biofilms are responsible for persistent infections and antimicrobial resistance. Pseudomonas aeruginosa was investigated with its ability to form biofilm by detecting genes responsible for producing biofilms and biofilm-specific antimicrobial resistance. The association between antibiotic resistance and biofilm was investigated.
Methods
This cross-sectional study was conducted from July 2017 to December 2018. A total of 446 samples (infected burn, surgical wounds, and endotracheal aspirate) were collected from admitted patients of Dhaka Medical College and Hospital, Bangladesh. P. aeruginosa was isolated and identified by biochemical tests and polymerase chain reaction. Biofilm production by tissue culture plate method followed by detection of biofilm-producing genes (pqsA, pslA, pslD, pslH, pelA, lasR) and biofilm-specific antibiotic resistance genes (ndvB, PA1874, PA1876, PA1877) by polymerase chain reaction were done. Antibiotic susceptibility test was carried out by disk diffusion method; for colistin agar dilution method of minimal inhibitory concentration was followed.
Results
Among 232 (52.02%) positive strains of P. aeruginosa, 24 (10.30%) produced biofilms in tissue culture plate. Among biofilm-producing genes, pqsA was the highest (79.17%). pslA and pelA were 70.83%, pslD 45.83%, pslH and lasR 37.5%. Among biofilm-specific antibiotic resistance genes, 16.67% were ndvB, and 8.33% were PA1874 and PA1877. Biofilm-forming strains were significantly resistant to colistin.
Conclusions
Detection of biofilm-forming genes may be a good tool for the evaluation of biofilm production, which will help in prompt and better management of chronic or device-associated infections.
{"title":"Biofilm-producing and specific antibiotic resistance genes in Pseudomonas aeruginosa isolated from patients admitted to a tertiary care hospital, Bangladesh","authors":"Rubaiya Binte Kabir , Tasnim Ahsan , Md. Faizur Rahman , Mohammad Jobayer , SM Shamsuzzaman","doi":"10.1016/j.ijregi.2024.100369","DOIUrl":"10.1016/j.ijregi.2024.100369","url":null,"abstract":"<div><h3>Objectives</h3><p>Biofilms are responsible for persistent infections and antimicrobial resistance<em>. Pseudomonas aeruginosa</em> was investigated with its ability to form biofilm by detecting genes responsible for producing biofilms and biofilm-specific antimicrobial resistance. The association between antibiotic resistance and biofilm was investigated.</p></div><div><h3>Methods</h3><p>This cross-sectional study was conducted from July 2017 to December 2018. A total of 446 samples (infected burn, surgical wounds, and endotracheal aspirate) were collected from admitted patients of Dhaka Medical College and Hospital, Bangladesh. <em>P. aeruginosa</em> was isolated and identified by biochemical tests and polymerase chain reaction. Biofilm production by tissue culture plate method followed by detection of biofilm-producing genes (<em>pqsA, pslA, pslD, pslH, pelA, lasR</em>) and biofilm-specific antibiotic resistance genes (<em>ndvB</em>, PA1874, PA1876, PA1877) by polymerase chain reaction were done. Antibiotic susceptibility test was carried out by disk diffusion method; for colistin agar dilution method of minimal inhibitory concentration was followed.</p></div><div><h3>Results</h3><p>Among 232 (52.02%) positive strains of <em>P. aeruginosa</em>, 24 (10.30%) produced biofilms in tissue culture plate. Among biofilm-producing genes, <em>pqsA</em> was the highest (79.17%). <em>pslA</em> and <em>pelA</em> were 70.83%<em>, pslD</em> 45.83%, <em>pslH</em> and <em>lasR</em> 37.5%. Among biofilm-specific antibiotic resistance genes, 16.67% were <em>ndvB</em>, and 8.33% were PA1874 and PA1877. Biofilm-forming strains were significantly resistant to colistin.</p></div><div><h3>Conclusions</h3><p>Detection of biofilm-forming genes may be a good tool for the evaluation of biofilm production, which will help in prompt and better management of chronic or device-associated infections.</p></div>","PeriodicalId":73335,"journal":{"name":"IJID regions","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-04-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2772707624000407/pdfft?md5=2047b17b95f79ae5bf420e32de614b78&pid=1-s2.0-S2772707624000407-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140793978","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-20DOI: 10.1016/j.ijregi.2024.100368
Wael Goravey , Clement K.M. Tsui , Gawahir A. Ali , Mostafa Suhail Najim , Khalid Shunnar , Emad B. Ibrahim , Mazen A. Sid Ahmed , Muna Al Maslamani , Ali Sultan , Sini Skariah , Hamad Abdel Hadi
Background
Resistant Salmonella infections are a major global public health challenge particularly for multidrug-resistant (MDR) isolates manifesting as bloodstream infections (BSIs).
Objectives
To evaluate clinical, phenotypic, and genotypic characteristics of extended-spectrum beta-lactamase (ESBL) producing Salmonella enterica BSIs from Qatar.
Methods
Phenotypic ESBL Salmonella enterica from adult patients presenting with positive BSIs were collected between January 2019 to May 2020. Microbiological identification and characterization were performed using standard methods while genetic characteristics were examined through whole genome sequencing studies.
Results
Of 151 episodes of Salmonella enterica BSI, 15 (10%) phenotypic ESBL isolates were collected. Recent travel was recorded in most cases (80%) with recent exposure to antimicrobials (27%). High-level resistance to quinolines, aminoglycosides, and cephalosporins was recorded (80-100%) while meropenem, tigecycline and colistin demonstrated universal susceptibility. Genomic evaluation demonstrated dominance of serotype Salmonella Typhi sequence type 1 (93%) while antimicrobial resistance genes revealed dominance of aminoglycoside resistance (100%), qnrS1 quinolones resistance (80%), blaCTX-M-15 ESBLs (86.7%), and paucity of AmpC resistance genes (6.7%).
Conclusions
Invasive MDR Salmonella enterica is mainly imported, connected to patients from high prevalent regions with recent travel and antimicrobial use caused by specific resistant clones. In suspected cases of multidrug resistance, carbapenem therapy is recommended.
背景耐药沙门氏菌感染是全球公共卫生面临的一项重大挑战,尤其是表现为血流感染(BSI)的耐多药(MDR)分离菌株。 Objectives To evaluate clinical, phenotypic, and genotypic characteristics of extended-spectrum beta-lactamase (ESBL) producing Salmonella enterica BSIs from Qatar.MethodsPhenotypic ESBL Salmonella enterica from adult patients presenting with positive BSIs were collected between January 2019 to May 2020.结果 在 151 例肠炎沙门氏菌 BSI 中,收集到 15 例(10%)表型 ESBL 分离物。大多数病例(80%)都有近期旅行的记录,其中有 27% 的病例近期接触过抗菌药物。对奎诺林、氨基糖苷类和头孢菌素的耐药性较高(80%-100%),而对美罗培南、替加环素和可乐定则普遍敏感。基因组评估显示血清型 Typhi 沙门氏菌序列 1 型占主导地位(93%),而抗菌药耐药基因显示氨基糖苷类耐药占主导地位(100%)、qnrS1 喹诺酮类耐药占主导地位(80%)、blaCTX-M-15 ESBLs 占主导地位(86.结论侵袭性 MDR 肠炎沙门氏菌主要是由进口的,与来自高流行地区的病人有关,最近的旅行和抗菌药的使用由特定的耐药克隆引起。对于疑似多重耐药病例,建议采用碳青霉烯类疗法。
{"title":"Clinical, phenotypic, and genotypic characteristics of ESBL-producing Salmonella enterica bloodstream infections from Qatar","authors":"Wael Goravey , Clement K.M. Tsui , Gawahir A. Ali , Mostafa Suhail Najim , Khalid Shunnar , Emad B. Ibrahim , Mazen A. Sid Ahmed , Muna Al Maslamani , Ali Sultan , Sini Skariah , Hamad Abdel Hadi","doi":"10.1016/j.ijregi.2024.100368","DOIUrl":"10.1016/j.ijregi.2024.100368","url":null,"abstract":"<div><h3>Background</h3><p>Resistant <em>Salmonella</em> infections are a major global public health challenge particularly for multidrug-resistant (MDR) isolates manifesting as bloodstream infections (BSIs).</p></div><div><h3>Objectives</h3><p>To evaluate clinical, phenotypic, and genotypic characteristics of extended-spectrum beta-lactamase (ESBL) producing <em>Salmonella enterica</em> BSIs from Qatar.</p></div><div><h3>Methods</h3><p>Phenotypic ESBL <em>Salmonella enterica</em> from adult patients presenting with positive BSIs were collected between January 2019 to May 2020. Microbiological identification and characterization were performed using standard methods while genetic characteristics were examined through whole genome sequencing studies.</p></div><div><h3>Results</h3><p>Of 151 episodes of <em>Salmonella enterica</em> BSI, 15 (10%) phenotypic ESBL isolates were collected. Recent travel was recorded in most cases (80%) with recent exposure to antimicrobials (27%). High-level resistance to quinolines, aminoglycosides, and cephalosporins was recorded (80-100%) while meropenem, tigecycline and colistin demonstrated universal susceptibility. Genomic evaluation demonstrated dominance of serotype <em>Salmonella</em> Typhi sequence type 1 (93%) while antimicrobial resistance genes revealed dominance of aminoglycoside resistance (100%)<em>, qnr</em>S1 quinolones resistance (80%), <em>bla</em><sub>CTX-M-15</sub> ESBLs (86.7%), and paucity of AmpC resistance genes (6.7%).</p></div><div><h3>Conclusions</h3><p>Invasive MDR <em>Salmonella enterica</em> is mainly imported, connected to patients from high prevalent regions with recent travel and antimicrobial use caused by specific resistant clones. In suspected cases of multidrug resistance, carbapenem therapy is recommended.</p></div>","PeriodicalId":73335,"journal":{"name":"IJID regions","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-04-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2772707624000390/pdfft?md5=4df17b4b6882595ba3e092f216dcf713&pid=1-s2.0-S2772707624000390-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140792266","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-14DOI: 10.1016/j.ijregi.2024.100366
Mie Møller , Trine Abelsen , Anna Irene Vedel Sørensen , Mikael Andersson , Lennart Friis Hansen , Christine Dilling-Hansen , Nikolai Kirkby , Peter Vedsted , Kåre Mølbak , Anders Koch
Objectives
This study aimed to explore how the Greenlandic population experienced the course of both acute and long-term COVID-19. It was motivated by the unique epidemiologic situation in Greenland, with delayed community transmission of SARS-CoV-2 relative to the rest of the world.
Methods
In a survey among 310 Greenlandic adults, we assessed the association between previous SARS-CoV-2 infection and overall health outcomes by administering three repeated questionnaires over 12 months after infection, with a response rate of 41% at the 12-month follow-up. The study included 128 individuals with confirmed SARS-CoV-2 infection from January/February 2022 and 182 test-negative controls. Participants were recruited through personal approaches, phone calls, and social media platforms.
Results
A total of 53.7% of 162 participants who were test-positive recovered within 4 weeks and 2.5% were hospitalized due to SARS-CoV-2. The most common symptoms were fatigue and signs of mild upper respiratory tract infection. Less than 5% reported sick leave above 2 weeks after infection. Compared with participants who were test-negative, there was an increased risk of reporting fatigue (risk differences 25.4%, 95% confidence interval 8.8-44.0) and mental exhaustion (risk differences 23.4%, 95% confidence interval 4.8-42.2) up to 12 months after a positive test.
Conclusions
Our results indicate that during a period dominated by the Omicron variant, Greenlanders experienced a mild acute course of COVID-19, with quick recovery, minimizing the impact on sick leave. Long COVID may be present in Greenlanders, with symptoms persisting up to 12 months after infection. However, it is important to consider the small sample size and modest response rate as limitations when interpreting the results.
{"title":"Exploring the dynamics of COVID-19 in a Greenlandic cohort: Mild acute illness and moderate risk of long COVID","authors":"Mie Møller , Trine Abelsen , Anna Irene Vedel Sørensen , Mikael Andersson , Lennart Friis Hansen , Christine Dilling-Hansen , Nikolai Kirkby , Peter Vedsted , Kåre Mølbak , Anders Koch","doi":"10.1016/j.ijregi.2024.100366","DOIUrl":"10.1016/j.ijregi.2024.100366","url":null,"abstract":"<div><h3>Objectives</h3><p>This study aimed to explore how the Greenlandic population experienced the course of both acute and long-term COVID-19. It was motivated by the unique epidemiologic situation in Greenland, with delayed community transmission of SARS-CoV-2 relative to the rest of the world.</p></div><div><h3>Methods</h3><p>In a survey among 310 Greenlandic adults, we assessed the association between previous SARS-CoV-2 infection and overall health outcomes by administering three repeated questionnaires over 12 months after infection, with a response rate of 41% at the 12-month follow-up. The study included 128 individuals with confirmed SARS-CoV-2 infection from January/February 2022 and 182 test-negative controls. Participants were recruited through personal approaches, phone calls, and social media platforms.</p></div><div><h3>Results</h3><p>A total of 53.7% of 162 participants who were test-positive recovered within 4 weeks and 2.5% were hospitalized due to SARS-CoV-2. The most common symptoms were fatigue and signs of mild upper respiratory tract infection. Less than 5% reported sick leave above 2 weeks after infection. Compared with participants who were test-negative, there was an increased risk of reporting fatigue (risk differences 25.4%, 95% confidence interval 8.8-44.0) and mental exhaustion (risk differences 23.4%, 95% confidence interval 4.8-42.2) up to 12 months after a positive test.</p></div><div><h3>Conclusions</h3><p>Our results indicate that during a period dominated by the Omicron variant, Greenlanders experienced a mild acute course of COVID-19, with quick recovery, minimizing the impact on sick leave. Long COVID may be present in Greenlanders, with symptoms persisting up to 12 months after infection. However, it is important to consider the small sample size and modest response rate as limitations when interpreting the results.</p></div>","PeriodicalId":73335,"journal":{"name":"IJID regions","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-04-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2772707624000377/pdfft?md5=cf1593aefabceb69006c24726cae0c1f&pid=1-s2.0-S2772707624000377-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140793184","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-04-07DOI: 10.1016/j.ijregi.2024.100364
Hussain Ahmed Raza , Mohummad Hassan Raza Raja , Muhammad Mussab Khakwani , Bushra Jamil
Pakistan has been a hub of several HIV outbreaks over the last 2 decades, with four major outbreaks being registered since 2018. There has been a recent rise in HIV infections, especially in high-risk populations, mainly consisting of people who inject drugs, men who have sex with men, prisoners, the transgender women community, and female sex workers. Consistently poor infection control practices, unregulated unsafe blood transfusion, questionable ethical practices by healthcare providers, and a general lack of awareness are the main drivers of recent HIV outbreaks, with these issues exacerbated by the presence of untrained health care providers. To stop the spread of HIV systemically and sustainably, aggressive measures need to be taken at all levels by all concerned stakeholders that not only deal with building up testing, tracing, and treatment capabilities but also address underlying grassroots problems that have largely been ignored to date.
{"title":"Pakistan's HIV high-risk populations: Critical appraisal of failure to curtail spread beyond key populations","authors":"Hussain Ahmed Raza , Mohummad Hassan Raza Raja , Muhammad Mussab Khakwani , Bushra Jamil","doi":"10.1016/j.ijregi.2024.100364","DOIUrl":"https://doi.org/10.1016/j.ijregi.2024.100364","url":null,"abstract":"<div><p>Pakistan has been a hub of several HIV outbreaks over the last 2 decades, with four major outbreaks being registered since 2018. There has been a recent rise in HIV infections, especially in high-risk populations, mainly consisting of people who inject drugs, men who have sex with men, prisoners, the transgender women community, and female sex workers. Consistently poor infection control practices, unregulated unsafe blood transfusion, questionable ethical practices by healthcare providers, and a general lack of awareness are the main drivers of recent HIV outbreaks, with these issues exacerbated by the presence of untrained health care providers. To stop the spread of HIV systemically and sustainably, aggressive measures need to be taken at all levels by all concerned stakeholders that not only deal with building up testing, tracing, and treatment capabilities but also address underlying grassroots problems that have largely been ignored to date.</p></div>","PeriodicalId":73335,"journal":{"name":"IJID regions","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-04-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2772707624000353/pdfft?md5=945d8e1d2a15faa345ecd85b499eed7c&pid=1-s2.0-S2772707624000353-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140605354","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
This study aimed to investigate the prevalence of Sarcoptes scabiei infestation and its associated factors among primary school children (PSC) in the Rufiji district.
Methods
A quantitative school-based cross-sectional study was conducted among 447 PSC in the Rufiji district. The prevalence of scabies among PSC was determined by clinical examination and by microscopic examination of skin samples for the presence of S. scabiei. A structured questionnaire was used to gather data on factors associated with S. scabiei infestation. Descriptive analysis, Fisher's exact, chi-square tests, and logistic regression analysis were used to analyze the data.
Results
The prevalence of scabies was 2.0%. Of the assessed factors, only physical contact with a person having itchy skin lesions (Adjusted Odds Ratio [AOR]=4.04, 95%CI 4.39-12.50) and infrequency of changing clothes before laundry (AOR=2.99, 95%CI 1.35-4.94) were significantly associated with scabies. The majority of participants demonstrated low levels of knowledge, with half exhibiting poor attitudes and inappropriate healthcare–seeking behaviors.
Conclusions
There was an ongoing transmission of scabies among PSC in the Rufiji district, with the factors associated with the transmission being physical contact with a person who had an itchy skin lesion and the infrequency of changing clothes before laundry. Therefore, there is a need for regular clinical screening and treatment of positive cases with preventive measures on contact and provision of health education.
{"title":"Prevalence of Sarcoptes scabiei infestation and its associated factors among primary school children: A school-based cross-sectional survey in the Rufiji district, Tanzania","authors":"Mary Joseph , Vivian Mushi , Hoseenu Palilo , Valeria Silvestri , Clemence Kinabo , Irene Mshana , Suleiman Chombo , Ismail Ndaile , Donath Tarimo","doi":"10.1016/j.ijregi.2024.100365","DOIUrl":"https://doi.org/10.1016/j.ijregi.2024.100365","url":null,"abstract":"<div><h3>Objectives</h3><p>This study aimed to investigate the prevalence of <em>Sarcoptes scabiei</em> infestation and its associated factors among primary school children (PSC) in the Rufiji district.</p></div><div><h3>Methods</h3><p>A quantitative school-based cross-sectional study was conducted among 447 PSC in the Rufiji district. The prevalence of scabies among PSC was determined by clinical examination and by microscopic examination of skin samples for the presence of <em>S. scabiei</em>. A structured questionnaire was used to gather data on factors associated with <em>S. scabiei</em> infestation. Descriptive analysis, Fisher's exact, chi-square tests, and logistic regression analysis were used to analyze the data.</p></div><div><h3>Results</h3><p>The prevalence of scabies was 2.0%. Of the assessed factors, only physical contact with a person having itchy skin lesions (Adjusted Odds Ratio [AOR]=4.04, 95%CI 4.39-12.50) and infrequency of changing clothes before laundry (AOR=2.99, 95%CI 1.35-4.94) were significantly associated with scabies. The majority of participants demonstrated low levels of knowledge, with half exhibiting poor attitudes and inappropriate healthcare–seeking behaviors.</p></div><div><h3>Conclusions</h3><p>There was an ongoing transmission of scabies among PSC in the Rufiji district, with the factors associated with the transmission being physical contact with a person who had an itchy skin lesion and the infrequency of changing clothes before laundry. Therefore, there is a need for regular clinical screening and treatment of positive cases with preventive measures on contact and provision of health education.</p></div>","PeriodicalId":73335,"journal":{"name":"IJID regions","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-04-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2772707624000365/pdfft?md5=a140e5cdb00f80054e239f0aab580765&pid=1-s2.0-S2772707624000365-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140618352","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
This study aimed to determine the SARS-CoV-2 variants in the first four COVID-19 waves using polymerase chain reaction (PCR)–based variant detection in Addis Ababa, Ethiopia.
Methods
A cross-sectional study was conducted using repository nasopharyngeal samples stored at the Ethiopian Public Health Institute COVID-19 testing laboratory. Stored positive samples were randomly selected from the first four waves based on their sample collection date. A total of 641 nasopharyngeal samples were selected and re-tested for SARS-CoV-2. RNA was extracted using nucleic acid purification instrument. Then, SARS-CoV-2 detection was carried out using 10 μl RNA and 20 μl reverse transcription-PCR fluorescent mix. Cycle threshold values <38 were considered positive.
Results
A total of 374 samples qualified for B.1.617 Lineage and six spike gene mutation variant typing kits. The variant typing kits identified 267 (71.4%) from the total qualifying samples. Alpha, Beta, Delta, and Omicron were dominantly identified variants from waves I, II, III, and IV, respectively. From the total identified positive study samples, 243 of 267 (91%) of variants identified from samples had cycle threshold values <30.
Conclusions
The study data demonstrated that reverse transcription-PCR–based variant typing can provide additional screening opportunities where sequencing opportunity is inaccessible. The assays could be implemented in laboratories performing SARS-CoV-2 molecular testing.
{"title":"SARS-CoV-2 variant typing using real-time reverse transcription-polymerase chain reaction–based assays in Addis Ababa, Ethiopia","authors":"Wodneh G/meskel , Kassu Desta , Regasa Diriba , Mahlet Belachew , Martin Evans , Vlademir Cantarelli , Maritza Urrego , Abay Sisay , Atsbeha Gebreegziabxier , Adugna Abera","doi":"10.1016/j.ijregi.2024.100363","DOIUrl":"10.1016/j.ijregi.2024.100363","url":null,"abstract":"<div><h3>Objectives</h3><p>This study aimed to determine the SARS-CoV-2 variants in the first four COVID-19 waves using polymerase chain reaction (PCR)–based variant detection in Addis Ababa, Ethiopia.</p></div><div><h3>Methods</h3><p>A cross-sectional study was conducted using repository nasopharyngeal samples stored at the Ethiopian Public Health Institute COVID-19 testing laboratory. Stored positive samples were randomly selected from the first four waves based on their sample collection date. A total of 641 nasopharyngeal samples were selected and re-tested for SARS-CoV-2. RNA was extracted using nucleic acid purification instrument. Then, SARS-CoV-2 detection was carried out using 10 μl RNA and 20 μl reverse transcription-PCR fluorescent mix. Cycle threshold values <38 were considered positive.</p></div><div><h3>Results</h3><p>A total of 374 samples qualified for B.1.617 Lineage and six spike gene mutation variant typing kits. The variant typing kits identified 267 (71.4%) from the total qualifying samples. Alpha, Beta, Delta, and Omicron were dominantly identified variants from waves I, II, III, and IV, respectively. From the total identified positive study samples, 243 of 267 (91%) of variants identified from samples had cycle threshold values <30.</p></div><div><h3>Conclusions</h3><p>The study data demonstrated that reverse transcription-PCR–based variant typing can provide additional screening opportunities where sequencing opportunity is inaccessible. The assays could be implemented in laboratories performing SARS-CoV-2 molecular testing.</p></div>","PeriodicalId":73335,"journal":{"name":"IJID regions","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-03-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2772707624000341/pdfft?md5=ade831902fc7cd79a9a262e56bdad848&pid=1-s2.0-S2772707624000341-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140399305","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-03-30DOI: 10.1016/j.ijregi.2024.100361
Mark A. Caudell , Carmen Castillo , Lucas F. Santos , Laura Grajeda , Juan Carlos Romero , Maria Renee Lopez , Sylvia Omulo , Mariangeli Freitas Ning , Guy H. Palmer , Douglas R. Call , Celia Cordon-Rosales , Rachel M. Smith , Carolyn T.A. Herzig , Ashley Styczynski , Brooke M. Ramay
Objectives
The spread of extended-spectrum cephalosporin-resistant Enterobacterales (ESCrE) and carbapenem-resistant Enterobacterales (CRE) has resulted in increased morbidity, mortality, and health care costs worldwide. To identify the factors associated with ESCrE and CRE colonization within hospitals, we enrolled hospitalized patients at a regional hospital located in Guatemala.
Methods
Stool samples were collected from randomly selected patients using a cross-sectional study design (March-September, 2021), and samples were tested for the presence of ESCrE and CRE. Hospital-based and household variables were examined for associations with ESCrE and CRE colonization using lasso regression models, clustered by ward (n = 21).
Results
A total of 641 patients were enrolled, of whom complete data sets were available for 593. Colonization with ESCrE (72.3%, n = 429/593) was negatively associated with carbapenem administration (odds ratio [OR] 0.21, 95% confidence interval [CI] 0.11-0.42) and positively associated with ceftriaxone administration (OR 1.61, 95% CI 1.02-2.53), as was reported hospital admission within 30 days of the current hospitalization (OR 2.84, 95% CI 1.19-6.80). Colonization with CRE (34.6%, n = 205 of 593) was associated with carbapenem administration (OR 2.62, 95% CI 1.39-4.97), reported previous hospital admission within 30 days of current hospitalization (OR 2.58, 95% CI 1.17-5.72), hospitalization in wards with more patients (OR 1.05, 95% CI 1.02-1.08), hospitalization for ≥4 days (OR 3.07, 95% CI 1.72-5.46), and intubation (OR 2.51, 95% CI 1.13-5.59). No household-based variables were associated with ESCrE or CRE colonization in hospitalized patients.
Conclusion
The hospital-based risk factors identified in this study are similar to what has been reported for risk of health care–associated infections, consistent with colonization being driven by hospital settings rather than community factors. This also suggests that colonization with ESCrE and CRE could be a useful metric to evaluate the efficacy of infection and prevention control programs in clinics and hospitals.
目的耐广谱头孢菌素肠杆菌(ESCRE)和耐碳青霉烯类肠杆菌(CRE)的传播已导致全球发病率、死亡率和医疗费用的增加。为了确定与医院内ESCrE和CRE定植相关的因素,我们在危地马拉的一家地区医院招募了住院患者。方法采用横断面研究设计(2021年3月至9月)从随机挑选的患者中收集工具样本,并检测样本中是否存在ESCrE和CRE。使用拉索回归模型检测医院和家庭变量与 ESCrE 和 CRE 定植的相关性,按病房分组(n = 21)。ESCrE定植(72.3%,n = 429/593)与碳青霉烯类用药呈负相关(比值比 [OR] 0.21,95% 置信区间 [CI] 0.11-0.42),与头孢曲松用药呈正相关(OR 1.61,95% CI 1.02-2.53),与本次住院 30 天内的入院报告呈正相关(OR 2.84,95% CI 1.19-6.80)。CRE菌落(34.6%,593 例中的 205 例)与使用碳青霉烯类药物(OR 2.62,95% CI 1.39-4.97)、本次住院后 30 天内入院(OR 2.58,95% CI 1.17-5.72)、在病人较多的病房住院(OR 1.05,95% CI 1.02-1.08)、住院时间≥4 天(OR 3.07,95% CI 1.72-5.46)和插管(OR 2.51,95% CI 1.13-5.59)。本研究中发现的医院风险因素与已报道的医疗相关感染风险因素相似,这表明定植是由医院环境而非社区因素驱动的。这也表明,ESCrE 和 CRE 定植可作为评估诊所和医院感染和预防控制项目效果的有用指标。
{"title":"Risk factors for colonization with extended-spectrum cephalosporin-resistant and carbapenem-resistant Enterobacterales among hospitalized patients in Guatemala: An Antibiotic Resistance in Communities and Hospitals (ARCH) study","authors":"Mark A. Caudell , Carmen Castillo , Lucas F. Santos , Laura Grajeda , Juan Carlos Romero , Maria Renee Lopez , Sylvia Omulo , Mariangeli Freitas Ning , Guy H. Palmer , Douglas R. Call , Celia Cordon-Rosales , Rachel M. Smith , Carolyn T.A. Herzig , Ashley Styczynski , Brooke M. Ramay","doi":"10.1016/j.ijregi.2024.100361","DOIUrl":"10.1016/j.ijregi.2024.100361","url":null,"abstract":"<div><h3>Objectives</h3><p>The spread of extended-spectrum cephalosporin-resistant Enterobacterales (ESCrE) and carbapenem-resistant Enterobacterales (CRE) has resulted in increased morbidity, mortality, and health care costs worldwide. To identify the factors associated with ESCrE and CRE colonization within hospitals, we enrolled hospitalized patients at a regional hospital located in Guatemala.</p></div><div><h3>Methods</h3><p>Stool samples were collected from randomly selected patients using a cross-sectional study design (March-September, 2021), and samples were tested for the presence of ESCrE and CRE. Hospital-based and household variables were examined for associations with ESCrE and CRE colonization using lasso regression models, clustered by ward (n = 21).</p></div><div><h3>Results</h3><p>A total of 641 patients were enrolled, of whom complete data sets were available for 593. Colonization with ESCrE (72.3%, n = 429/593) was negatively associated with carbapenem administration (odds ratio [OR] 0.21, 95% confidence interval [CI] 0.11-0.42) and positively associated with ceftriaxone administration (OR 1.61, 95% CI 1.02-2.53), as was reported hospital admission within 30 days of the current hospitalization (OR 2.84, 95% CI 1.19-6.80). Colonization with CRE (34.6%, n = 205 of 593) was associated with carbapenem administration (OR 2.62, 95% CI 1.39-4.97), reported previous hospital admission within 30 days of current hospitalization (OR 2.58, 95% CI 1.17-5.72), hospitalization in wards with more patients (OR 1.05, 95% CI 1.02-1.08), hospitalization for ≥4 days (OR 3.07, 95% CI 1.72-5.46), and intubation (OR 2.51, 95% CI 1.13-5.59). No household-based variables were associated with ESCrE or CRE colonization in hospitalized patients.</p></div><div><h3>Conclusion</h3><p>The hospital-based risk factors identified in this study are similar to what has been reported for risk of health care–associated infections, consistent with colonization being driven by hospital settings rather than community factors. This also suggests that colonization with ESCrE and CRE could be a useful metric to evaluate the efficacy of infection and prevention control programs in clinics and hospitals.</p></div>","PeriodicalId":73335,"journal":{"name":"IJID regions","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-03-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2772707624000328/pdfft?md5=64b828b11ec8b4ce4735642b53b44768&pid=1-s2.0-S2772707624000328-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140404805","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}