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EELS of phonons: polarity and temperature dependence. 声子的EELS:极性和温度依赖性。
IF 1.9 Pub Date : 2025-12-19 DOI: 10.1093/jmicro/dfaf055
Jun Kikkawa

This paper provides an overview of phonon measurement using electron energy loss spectroscopy (EELS) in the electron microscope, with polar cubic boron nitride (c-BN) and nonpolar diamond crystals as representative examples. Differential scattering cross-sections for phonon creation and annihilation are reviewed, highlighting the influence of crystal polarity under kinematical and dynamical scattering conditions. The temperature dependence of EELS intensity is examined, with local absolute temperature evaluated by analysing the ratio of phonon annihilation to creation intensities. Practical aspects and challenges associated with phonon measurement in EELS are also discussed, together with future perspectives in this evolving field.

本文以极性立方氮化硼(c-BN)和非极性金刚石晶体为代表,综述了电子能量损失谱(EELS)在电子显微镜下的声子测量方法。回顾了声子产生和湮灭的微分散射截面,重点介绍了晶体极性在运动学和动力学散射条件下的影响。研究了EELS强度的温度依赖性,通过分析声子湮灭与产生强度的比值来评估局部绝对温度。在EELS声子测量相关的实际方面和挑战也进行了讨论,以及在这个不断发展的领域的未来前景。
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引用次数: 0
Development of a Wire Corrector for Low Accelerating Voltage Scanning Electron Microscopy. 低加速电压扫描电镜用导线校正器的研制。
IF 1.9 Pub Date : 2025-12-18 DOI: 10.1093/jmicro/dfaf054
Tomonori Nakano, Yu Yamazawa

Aberration correctors are essential for achieving high-resolution imaging in advanced electron microscopy. However, their complexity and cost have limited their integration into conventional scanning electron microscopes (SEMs), particularly in low-voltage applications. In this study, we present a wire aberration corrector that utilizes symmetrically arranged current lines to generate multipole fields. The corrector was implemented in a cold field emission SEM equipped with a bright-field STEM detector and operated at 30 kV. Experimental results demonstrate successful generation of quadrupole to dodecapole fields, effective correction of spherical aberration, and improved imaging of carbon multilayers. These findings demonstrate that wire correctors offer a compact and cost-effective means to enhance imaging performance in standard SEM systems, and the underlying principle could be adapted for other electron microscopy platforms such as TEM or STEM.

像差校正器是必不可少的实现高分辨率成像在先进的电子显微镜。然而,它们的复杂性和成本限制了它们与传统扫描电子显微镜(sem)的集成,特别是在低压应用中。在这项研究中,我们提出了一种利用对称排列的电流线来产生多极场的线像差校正器。校正器安装在配有亮场STEM探测器的冷场发射SEM中,工作电压为30 kV。实验结果表明,四极到十二极磁场的成功产生,有效地校正了球差,提高了碳多层膜的成像效果。这些发现表明,导线校正器提供了一种紧凑且具有成本效益的方法来提高标准SEM系统的成像性能,其基本原理可以适用于其他电子显微镜平台,如TEM或STEM。
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引用次数: 0
Radiation-induced short-range order in ceramics. 陶瓷中辐射诱发的短程有序。
IF 1.9 Pub Date : 2025-12-02 DOI: 10.1093/jmicro/dfaf053
Manabu Ishimaru

The development of radiation tolerant materials is of technological importance for establishing safe operating systems in the nuclear industry, from power generation to the immobilization of high-level radioactive waste. Harsh radiation environments generate interstitials and vacancies in materials, and their accumulation leads to structural changes, including order-to-disorder phase transformations and amorphization. These structural changes are induced locally on an atomic scale; therefore, transmission electron microscopy is a useful technique for analyzing radiation effects in materials. In addition, the strong interaction between matter and electrons enables the detection of weak signals associated with phase transformations, such as diffuse scattering and halo rings. This article provides an overview of radiation-induced amorphous structures in materials consisting of light elements, such as boron carbide and silicon oxycarbide, as well as the short-range ordered structure that appears during an order-to-disorder phase transformation in fluorite structural derivatives.

开发耐辐射材料对于建立核工业从发电到高放射性废物固定化的安全操作系统具有重要的技术意义。恶劣的辐射环境会在材料中产生间隙和空位,它们的积累会导致结构变化,包括有序到无序的相变和非晶化。这些结构变化是在局部原子尺度上引起的;因此,透射电子显微镜是分析材料辐射效应的一种有用的技术。此外,物质和电子之间的强相互作用使得检测与相变相关的弱信号成为可能,例如漫射散射和晕环。本文概述了由轻元素(如碳化硼和碳化氧硅)组成的材料中辐射诱导的非晶态结构,以及萤石结构衍生物在有序到无序相变过程中出现的短程有序结构。
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引用次数: 0
Auto-thresholding for unbiased electron counting. 无偏电子计数的自动阈值。
IF 1.9 Pub Date : 2025-12-01 DOI: 10.1093/jmicro/dfaf025
Julie Marie Bekkevold, Jonathan J P Peters, Ryo Ishikawa, Naoya Shibata, Lewys Jones

As interest in fast real-space frame-rate scanning transmission electron microscopy for both structural and functional characterization of materials increases, so does the need for precise and fast electron detection techniques. Electron counting, with monolithic, segmented, or 4D detectors, has been explored for many years. Recent studies have shown that a retrofittable signal digitizer for a monolithic or segmented detector can be a sustainable and accessible way to enhance the performance of existing detectors, especially for imaging at fast scan speeds. Since such signal digitization uses a threshold on the gradient of the detector signal to identify electron events, appropriate threshold choice is key. Previously, this threshold has been set manually by the operator and is therefore inherently susceptible to human bias. In this work, we introduce an auto-thresholding approach for electron counting to determine the optimal threshold by maximizing the difference in identified counts from a stream with real electron events and a stream with only noise. This leads to easier operation, increased throughput and eliminates human bias in signal digitization. When pixel dwell time becomes shorter than scintillator response time, digitization of the detector signal is needed to avoid artefacts in STEM images. Optimizing the threshold for this digitization process automatically is crucial to achieve high-quality quantitative digitized images, free of human bias for what threshold yields the best digitization.

随着对用于材料结构和功能表征的快速实时空间帧速率扫描透射电子显微镜的兴趣增加,对精确和快速电子检测技术的需求也在增加。电子计数,与单片,分段,或四维探测器,已经探索了许多年。最近的研究表明,用于单片或分段探测器的可改装信号数字化仪可以是一种可持续的和可访问的方法,以提高现有探测器的性能,特别是在快速扫描速度下成像。由于这种信号数字化使用检测器信号梯度上的阈值来识别电子事件,因此适当的阈值选择是关键。以前,这个阈值是由操作员手动设置的,因此天生就容易受到人为偏见的影响。在这项工作中,我们引入了一种用于电子计数的自动阈值方法,通过最大化具有真实电子事件的流和只有噪声的流的识别计数的差异来确定最佳阈值。这使得操作更容易,提高了吞吐量,并消除了信号数字化中的人为偏差。
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引用次数: 0
Expanding the potential of paraffin section studies using NanoSuit-correlative light and electron microscopy. 利用纳米光镜和电子显微镜扩大石蜡切片研究的潜力。
IF 1.9 Pub Date : 2025-12-01 DOI: 10.1093/jmicro/dfaf028
Hideya Kawasaki

Histological examination using optical microscopy is essential in life sciences and diagnostic medicine, particularly for formalin-fixed paraffin-embedded (FFPE) tissue sections stained with hematoxylin and eosin or 3,3'-diaminobenzidine. However, conventional electron microscopy faces challenges, such as sample destruction, complex processing and difficulty in correlating light and electron microscopy images. The NanoSuit method overcomes these limitations by forming an ultrathin protective membrane that enhances conductivity and preserves hydrated tissue architecture, enabling high-resolution scanning electron microscopy imaging. In this study, we applied NanoSuit-correlative light and electron microscopy (CLEM) to FFPE sections to assess its potential for non-destructive and reversible electron microscopy characterization. Using NanoSuit-CLEM, we successfully visualized endothelial structures, amyloid deposits, sarcomeres, mitochondria, bacteria, viruses and foreign body deposits in FFPE sections. Energy-dispersive X-ray spectrometry further facilitated elemental analysis of foreign materials. These findings demonstrate that NanoSuit-CLEM allows for the precise visualization of ultrastructural details in FFPE sections without requiring new equipment. This method holds promise for advancing pathology by improving diagnostic accuracy and enabling multimodal tissue analysis.

使用光学显微镜进行组织学检查在生命科学和诊断医学中是必不可少的,特别是对于用苏木精和伊红或3,3'-二氨基联苯胺染色的福尔马林固定石蜡包埋(FFPE)组织切片。然而,传统的电子显微镜面临的挑战,如样品破坏,复杂的处理,以及难以将光学和电子显微镜图像相关联。NanoSuit方法通过形成超薄保护膜来提高导电性并保持水合组织结构,从而克服了这些限制,实现了高分辨率扫描电子显微镜成像。在这项研究中,我们将纳米套件相关的光学和电子显微镜(CLEM)应用于FFPE切片,以评估其无损和可逆的电子显微镜表征的潜力。利用nanofit - clem,我们成功地可视化了FFPE切片中的内皮结构、淀粉样蛋白沉积、肌瘤、线粒体、细菌、病毒和异物沉积。能量色散x射线光谱法进一步促进了外来物质的元素分析。这些发现表明,nanosuite - clem可以在不需要新设备的情况下精确显示FFPE切片的超微结构细节。这种方法有望通过提高诊断准确性和实现多模态组织分析来推进病理学。
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引用次数: 0
Seg & Ref: a newly developed toolset for artificial intelligence-powered segmentation and interactive refinement for labor-saving three-dimensional reconstruction. Seg and Ref:新开发的人工智能分割和交互式细化工具集,用于省力的三维重建。
IF 1.9 Pub Date : 2025-12-01 DOI: 10.1093/jmicro/dfaf015
Satoru Muro, Takuya Ibara, Akimoto Nimura, Keiichi Akita

Traditional three-dimensional (3D) reconstruction is labor-intensive owing to manual segmentation; this can be addressed by developing artificial intelligence (AI)-driven automated segmentation. However, it is limited by a lack of user-friendly tools for morphologists. We present a workflow for 3D reconstruction using our AI-powered segmentation tool. Specifically, we developed an interactive toolset, 'Seg & Ref', to overcome the abovementioned challenges by enabling AI-powered segmentation and easy mask editing without requiring a command-line setup. We demonstrated a 3D reconstruction workflow using serial sections of a Carnegie Stage 15 human embryo. Automated segmentation (Step 1) was performed using the graphical user interface, 'SAM2 GUI for Img Seq', which utilizes the Segment Anything Model 2 and supports interactive segmentation through a web-based interface. Users specify target structures via box prompts, and the results are propagated across all images for batch segmentation. The segmentation masks were reviewed and corrected (Step 2) using 'Segment Editor PP', a PowerPoint-based tool enabling interactive mask refinement. Finally, the corrected masks were imported into the 3D Slicer application for reconstruction (Step 3). Our 3D reconstruction visualized key structures, including the spinal cord, veins, aorta, mesonephros, gut, heart, trachea, liver and peritoneal cavity. The reconstructed models accurately represented their spatial relationships and morphologies. This provides a labor-saving approach for 3D reconstruction workflows owing to their optimization for serial sections, versatility and accessibility without programming expertise. Therefore, morphological research can be enhanced by precise segmentation using intuitive and user-friendly interfaces of 'Seg & Ref'.

传统的三维重建由于需要人工分割,劳动强度大;这可以通过开发人工智能驱动的自动细分来解决。然而,由于缺乏对形态学家用户友好的工具,它受到了限制。我们提出了一个使用人工智能分割工具进行三维重建的工作流程。具体来说,我们开发了一个交互式工具集“Seg & Ref”,通过启用人工智能驱动的分割和简单的掩码编辑来克服上述挑战,而无需命令行设置。我们演示了一个三维重建工作流程,使用卡内基阶段15人类胚胎的连续切片。自动分割(步骤1)使用图形用户界面“SAM2 GUI for Img Seq”执行,该界面利用了Segment Anything Model 2,并通过基于web的界面支持交互式分割。用户通过框提示指定目标结构,结果将传播到所有图像中进行批量分割。使用“段编辑器PP”对分割蒙版进行审查和纠正(步骤2),这是一种基于powerpoint的工具,可以进行交互式蒙版改进。最后,将校正后的口罩导入3D Slicer应用程序进行重建(step3)。我们的三维重建显示了关键结构,包括脊髓、静脉、主动脉、中肾、肠道、心脏、气管、肝脏和腹膜腔。重建的模型准确地反映了它们的空间关系和形态。这为三维重建工作流提供了一种省力的方法,因为它们对串行部分进行了优化,具有通用性,并且无需编程专业知识即可访问。因此,使用直观友好的“Seg & Ref”界面进行精确分割可以加强形态学研究。
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引用次数: 0
Ultra-low-voltage observation of battery materials by scanning electron microscopy. 电池材料的超低电压扫描电镜观察。
IF 1.9 Pub Date : 2025-12-01 DOI: 10.1093/jmicro/dfaf024
Yoichiro Hashimoto, Yutaka Nagaoka, Toru Aiso, Shuhei Yabu, Masahiro Sasajima

The mechanism of voltage contrast formation under ultra-low landing energy condition is discussed, by which a binder contained in lithium-ion battery anode material has been visualized with high contrast. Since the anode material is a complex experimental system with multiple contrast formation factors, a standard sample simulating it was fabricated for simplification. The binder was observed to be darker than the substrate at landing energies of 30-50 eV. The binder exhibited a distinct appearance reflecting its shape (in the 3D-particle mode) at 20 eV. The mirroring phenomenon occurred at 10 eV, in which the primary electrons bounced off the sample before irradiating the surface. The surface potential at the electron beam irradiation moment was presumed to affect the contrast formation, but direct measurement of it was difficult. Thus, the sample was transferred to an Atomic Force Microscope without exposure to the atmosphere to measure the 'residual' potential of the binder in KPFM mode after the SEM observations. Under darker binder observed conditions of 30-50 eV, KPFM measured residual potential was positive relative to the substrate. Under conditions of the 3D-particle mode at 20  eV and the mirroring phenomenon at 10 eV, the residual potentials were negative. Therefore, a correlation between the behavior of the voltage contrast and the residual potential was obtained. Finer landing-energy step measurement revealed hysteresis responses of voltage contrast and the residual potential to the landing energy. The Cause of the hysteresis was discussed.

探讨了超低落地能条件下形成电压对比的机理,实现了锂离子电池负极材料中粘结剂的高对比度可视化。由于阳极材料是一个复杂的实验系统,具有多个对比形成因素,为了简化,制作了一个模拟它的标准样品。在30 ~ 50 eV的能量范围内,粘结剂比衬底颜色更深。在20ev下,粘结剂表现出明显的反映其形状的外观(在3d粒子模式下)。在10 eV时发生了镜像现象,其中初级电子在照射到样品表面之前从样品上反弹。假设电子束辐照时刻的表面电位影响着造影剂的形成,但直接测量它是困难的。因此,样品被转移到AFM中,而不暴露于大气中,以测量扫描电镜观察后KPFM模式下粘合剂的“残余”电位。在30 eV至50 eV的较暗粘结剂条件下,KPFM测量的残余电位相对于衬底为正。在20 eV的3d粒子模式和10 eV的镜像现象条件下,剩余电位为负。因此,得到了电压对比性能与剩余电位之间的相关性。精细的着陆能量阶跃测量揭示了电压对比和剩余电位对着陆能量的滞后响应。讨论了磁滞产生的原因。探讨了超低落地能条件下电压对比形成的机理,实现了锂离子电池材料中粘结剂的高对比度可视化。我们证实了对比的变化是由表面电位的变化引起的,这取决于一次电子的着陆能量。
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引用次数: 0
Semi-automated image acquisition and analyses for broad users utilizing macro keyboards. 半自动图像采集和分析,为广大用户利用宏键盘。
IF 1.9 Pub Date : 2025-12-01 DOI: 10.1093/jmicro/dfaf018
Takaaki Watanabe, Toshiyasu Taniguchi

Scientific research relies on microscopy. However, manual image acquisition and analysis are inefficient and susceptible to errors. Fully automated workflows are often task-specific, and current AI-based systems are costly and may face difficulties in new scenarios. Here, we introduce a semi-automated system utilizing macro keyboards to streamline workflows. Programming multi-action keys for tasks such as focusing, image capture and data analysis reduces the manual input, boosting efficiency and accuracy. This intuitive system saves time for both experienced users and trainees. This cost-effective solution improves accessibility, flexibility and usability, supporting not only diverse imaging applications but also broader scientific instrumentation processes.

小摘要:本报告介绍了一种使用宏键盘简化工作流程的半自动显微镜系统。为对焦、图像捕捉和数据分析等任务编程的多操作键减少了手动输入,提高了效率和准确性。这种经济高效的解决方案提高了可访问性和可用性,支持各种成像应用和更广泛的科学仪器流程。科学研究依赖显微镜。然而,手动图像采集和分析效率低下且容易出错。完全自动化的工作流程通常是针对特定任务的,而目前基于人工智能的系统成本高昂,在新的应用场景中可能会遇到困难。在此,我们介绍一种利用宏键盘简化工作流程的半自动化系统。为对焦、图像捕捉和数据分析等任务编程多操作键,可减少人工输入,提高效率和准确性。这种直观的系统可为有经验的用户和学员节省时间。这种经济高效的解决方案提高了可访问性、灵活性和可用性,不仅支持各种成像应用,还支持更广泛的科学仪器流程。
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引用次数: 0
Characterization of the INTPIX4 SOI pixel detector in transmission electron microscopy at 120 and 200 keV. 120kev和200kev下INTPIX4 SOI像素探测器的透射电镜表征。
IF 1.9 Pub Date : 2025-12-01 DOI: 10.1093/jmicro/dfaf027
Yuichi Ishida, Takafumi Ishida, Makoto Kuwahara, Yasuo Arai, Koh Saitoh

Imaging performance with 120 and 200 keV electrons was evaluated with an integration-type silicon-on-insulator pixel detector called INTPIX4 installed in a conventional transmission electron microscope. We demonstrated that single-electron events can be detected with INTPIX4 quantitatively. The gain and signals of single-electron events were measured. On the basis of the results, the yields of the collected charge for 120 and 200 keV electrons were estimated to be 96±5% and 97±5%, respectively. The modulation transfer function and detective quantum efficiency were also measured. INTPIX4 was clarified to have high detection efficiency and high sensitivity. We also found that it is necessary to use electron beams with energies less than 120 keV for INTPIX4 because multiple scattering of primary electrons at the silicon sensor degrades image resolution. This detector is expected to be applicable to low-dose observations in transmission electron microscopy.

通过安装在传统透射电子显微镜上的集成型绝缘体上硅(SOI)像素探测器INTPIX4,评估了120和200 keV电子的成像性能。我们证明了用INTPIX4可以定量地检测单电子事件。测量了单电子事件的增益和信号。在此基础上,120 keV和200 keV电子的电荷回收率分别为96±5%和97±5%。测量了调制传递函数和探测量子效率。结果表明,INTPIX4具有较高的检测效率和灵敏度。我们还发现,对于INTPIX4,有必要使用能量小于120 keV的电子束,因为硅传感器上初级电子的多次散射会降低图像分辨率。该检测器有望应用于透射电子显微镜的低剂量观察。
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引用次数: 0
High energy-resolution soft X-ray emission spectrometer using a back-thinned CMOS detector for chemical bonding state analysis. 高能量分辨率软x射线发射光谱仪,采用后薄型CMOS探测器,用于化学键态分析。
IF 1.9 Pub Date : 2025-12-01 DOI: 10.1093/jmicro/dfaf021
Shogo Koshiya, Takanori Murano, Masami Terauchi

Improvement of a commercially available soft X-ray emission spectrometer was tested by introducing a fine-pixel-sized CMOS detector. The peak width of Mg Kα-emission was reduced to one-fourth of that obtained by the CCD detector presently used. Furthermore, the differences in the energy positions of satellite lines of Mg Kα- and also Kβ-emission profiles of Mg and MgO were observed. O K-emission profile of MgO exhibited a few structures reflecting the chemical bonding state. This spectrometer easily discriminated the intensity profiles of Fe Lα,β-emission reflecting the chemical bonding states of Fe atoms in Fe, FeO, Fe3O4 and Fe2O3.

通过引入细像素级CMOS探测器,测试了商用软x射线发射光谱仪的改进。Mg - k - α-发射峰宽减小到现有CCD探测器的1/4。此外,还观察到Mg和MgO的Kα-和k β-发射谱线能量位置的差异。MgO的O - k发射谱显示出一些反映化学键态的结构。该光谱仪可以很容易地分辨出Fe、FeO、Fe3O4和Fe2O3中Fe原子的化学键态的Lα、β-发射强度谱。
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引用次数: 0
期刊
Microscopy (Oxford, England)
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