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Limitations and drawbacks of DQE estimation methods applied to electron detectors. 应用于电子探测器的 DQE 估算方法的局限性和缺点。
Pub Date : 2024-10-04 DOI: 10.1093/jmicro/dfae016
Olivier Marcelot, Cécile Marcelot, Sébastien Rolando

The detective quantum efficiency (DQE) is generally accepted as the main figure of merit for the comparison between electron detectors, and most of the time given as a unique number at the Nyquist frequency while it is known to vary with electron dose. It is usually estimated, thanks to a method improved by McMullan in 2009. The purpose of this work is to analyze and to criticize this DQE extraction method on the basis of measurement and model results, and to give recommendations for fair comparison between detectors, wondering if the DQE is the right figure of merit for electron detectors.

DQE 通常被认为是比较电子探测器优劣的主要指标,在大多数情况下,它是奈奎斯特频率下的唯一数字,但它会随电子剂量的变化而变化。它通常是通过麦克马伦(McMullan)在 2009 年改进的方法估算出来的。这项工作的目的是在测量和模型结果的基础上,分析和批评这种DQE提取方法,并就探测器之间的公平比较提出建议,质疑DQE是否是电子探测器的正确优越性。
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引用次数: 0
Retraction of: Ultrastructural immunohistochemical study of L-type amino acid transporter 1-4F2 heavy chain in tumor microvasculatures of N-butyl-N-(4-hydroxybutyl) nitrosamine (BBN) induced rat bladder carcinoma. 撤回:N-丁基-N-(4-羟基丁基)亚硝胺(BBN)诱导的大鼠膀胱癌肿瘤微血管中L型氨基酸转运体1-4F2重链的超微结构免疫组化研究
Pub Date : 2024-10-04 DOI: 10.1093/jmicro/dfae033
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引用次数: 0
Application of Hilbert-differential phase contrast to scanning transmission electron microscopy. 扫描透射电子显微镜中的希尔伯特-差分相位对比应用。
Pub Date : 2024-10-04 DOI: 10.1093/jmicro/dfae015
Haruka Iga, Toshiki Shimizu, Hiroki Minoda

We report a novel class of scanning transmission electron microscopy with Hilbert-differential phase contrast (HDP-STEM) that displays nanostructures of thin samples in a topographical manner. A semicircular π-phase plate (PP) was used as an optical device for manipulating electron waves in HDP-STEM. This is the different design from the Zernike PP used in our previous phase plate STEM (P-STEM), but both must be placed in the front focal plane of the condenser lens. HDP-STEM images of multiwalled carbon nanotubes showed higher contrast than those obtained by conventional bright-field STEM. As the PP of the HDP-STEM is nonsymmetrical, several different images were obtained by changing the detection conditions. A two-dimensional electron detector was also used to remove the scattering contrast component in the same way as with the Zernike PP and obtain an image containing only (differential) phase contrast.

我们报告了一种新型希尔伯特差分相衬扫描透射电子显微镜(HDP-STEM),它能以地形方式显示薄样品的纳米结构。在 HDP-STEM 中,半圆形 π 相板(PP)被用作操纵电子波的光学设备。这种设计不同于我们之前在相板 STEM(P-STEM)中使用的 Zernike PP,但两者都必须置于聚光透镜的前焦平面。多壁碳纳米管的 HDP-STEM 图像显示出比传统明场 STEM 更高的对比度。由于 HDP-STEM 的 PP 是非对称的,因此可以通过改变检测条件获得几种不同的图像。此外,还使用了二维电子探测器,以与泽奈克PP相同的方式去除散射对比成分,获得仅包含(差分)相位对比的图像。
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引用次数: 0
Effective alignment method using a diamond notch knife for correlative array tomography. 使用金刚石缺口刀进行相关阵列断层扫描的有效对准方法。
Pub Date : 2024-10-04 DOI: 10.1093/jmicro/dfae013
Yumi Goto, Noriko Takeda-Kamiya, Kaori Yamaguchi, Mikio Yamazaki, Kiminori Toyooka

Correlative array tomography, combining light and electron microscopy via serial sections, plays a crucial role in the three-dimensional ultrastructural visualization and molecular distribution analysis in biological structures. To address the challenges of aligning fluorescence and electron microscopy images and aligning serial sections of irregularly shaped biological specimens, we developed a diamond notch knife, a new tool for puncturing holes using a diamond needle. The diamond needle featured a triangular and right-angled tip, enabling the drilling of deep holes upon insertion into the polished block face. This study describes the application of the diamond notch knife in correlative array tomography.

通过序列切片将光学显微镜和电子显微镜结合起来的相关阵列层析技术,在生物结构的三维超微结构可视化和分子分布分析中发挥着至关重要的作用。为了解决荧光显微镜和电子显微镜图像对齐以及不规则形状生物标本序列切片对齐的难题,我们开发了一种使用钻石针刺孔的新工具--钻石切口刀。金刚石针的针尖呈三角形直角,可在插入抛光块面后钻出深孔。本研究介绍了金刚石缺口刀在相关阵列断层扫描中的应用。
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引用次数: 0
Unlocking the potential of large-scale 3D imaging with tissue clearing techniques. 利用组织清除技术释放大规模三维成像的潜力。
Pub Date : 2024-09-28 DOI: 10.1093/jmicro/dfae046
Etsuo A Susaki

The three-dimensional (3D) anatomical structure of living organisms is intrinsically linked to their functions, yet modern life sciences have not fully explored this aspect. Recently, the combination of efficient tissue clearing techniques and light-sheet fluorescence microscopy (LSFM) for rapid 3D imaging has improved access to 3D spatial information in biological systems. This technology has found applications in various fields, including neuroscience, cancer research, and clinical histopathology, leading to significant insights. It allows imaging of entire organs or even whole bodies of animals and humans at multiple scales. Moreover, it enables a form of spatial omics by capturing and analyzing cellome information, which represents the complete spatial organization of cells. While current 3D imaging of cleared tissues has limitations in obtaining sufficient molecular information, emerging technologies such as multi-round tissue staining and super-multicolor imaging are expected to address these constraints. 3D imaging using tissue clearing and light-sheet microscopy thus offers a valuable research tool in the current and future life sciences for acquiring and analyzing large-scale biological spatial information.

生物体的三维(3D)解剖结构与生物体的功能有着内在联系,但现代生命科学尚未充分探索这一方面。最近,高效的组织清除技术与用于快速三维成像的光片荧光显微镜(LSFM)相结合,改善了生物系统中三维空间信息的获取。这项技术已在神经科学、癌症研究和临床组织病理学等多个领域得到应用,并产生了重要影响。它可以对动物和人类的整个器官甚至整个身体进行多尺度成像。此外,它还能通过捕捉和分析代表细胞完整空间组织的细胞组信息,实现一种空间全息成像。虽然目前的三维成像技术在获取足够的分子信息方面存在局限性,但多轮组织染色和超级多色成像等新兴技术有望解决这些制约因素。因此,利用组织清除和光片显微镜进行三维成像为当前和未来的生命科学研究提供了获取和分析大规模生物空间信息的宝贵工具。
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引用次数: 0
Magnification calibration of X-ray 3D microscopy using micro-line structures. 利用微线结构校准 X 射线三维显微镜的放大倍率。
Pub Date : 2024-09-24 DOI: 10.1093/jmicro/dfae045
Yasushi Azuma, Kazuhiro Kumagai, Naoki Kunishima, Koichiro Ito

X-ray microscopy using computed tomography (CT) is an excellent three-dimensional imaging instrument. Three-dimensional X-ray microscopy (3DXRM) is a nondestructive imaging technique used to inspect internal and external structures in units of submicrometers or less. The 3DXRM, although attractive, is mostly used as an observation instrument and is limited as a measurement system in quantitative evaluation and quality control. Calibration is required for use in measurement systems such as coordinate measurement systems, and specific standard samples and evaluation procedures are needed. The certified values of the standard samples must ideally be traceable to the International System of Units (SI). In the 3DXRM measurement system, line structures (LSs) are fabricated as prototype standard samples to conduct magnification calibration. In this study, we evaluated the LS intervals using calibrated cross-sectional scanning electron microscopy (SEM). A comparison of the evaluation results between SEM and 3DXRM for the LS intervals provided the magnification calibration factor for 3DXRM and validated the LSs, whereby the interval methods and feasibility of constructing an SI traceability system were evaluated using the calibrated SEM. Consequently, a magnification calibration factor of 1.01 was obtained for 3DXRM based on the intervals of the LSs evaluated by SEM. A possible route for realizing SI-traceable magnification calibration of 3DXRM has been presented.

使用计算机断层扫描(CT)的 X 射线显微镜是一种出色的三维成像仪器。三维 X 射线显微镜(3DXRM)是一种无损成像技术,用于检查单位为亚微米或更小的内部和外部结构。三维 X 射线显微镜虽然很有吸引力,但主要用作观察仪器,在定量评估和质量控制方面作为测量系统受到限制。在坐标测量系统等测量系统中使用时需要校准,并且需要特定的标准样品和评估程序。标准样品的认证值最好能溯源至国际单位制 (SI)。在 3DXRM 测量系统中,线结构 (LS) 被制作为原型标准样品,用于进行放大率校准。在本研究中,我们使用校准过的横截面扫描电子显微镜 (SEM) 对 LS 间隔进行了评估。通过比较扫描电子显微镜和 3DXRM 对 LS 间隔的评估结果,为 3DXRM 提供了放大倍率校准系数,并验证了 LS,从而使用校准的扫描电子显微镜评估了构建 SI 可追溯性系统的间隔方法和可行性。因此,根据 SEM 评估的 LS 间隔,3DXRM 的放大校准系数为 1.01。介绍了实现 SI 可追踪的 3DXRM 放大率校准的可能途径。
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引用次数: 0
Surface sensitivity of atomic resolution secondary electron imaging. 原子分辨率二次电子成像的表面灵敏度。
Pub Date : 2024-09-20 DOI: 10.1093/jmicro/dfae041
Koh Saitoh, Teppei Oyobe, Keisuke Igarashi, Takeshi Sato, Hiroaki Matsumoto, Hiromi Inada, Takahiko Endo, Yasumitsu Miyata, Rei Usami, Taishi Takenobu

The surface sensitivity of high-resolution secondary electron (SE) imaging is examined using twisted bilayers of MoS2 stacked at an angle of 30-degree. High-resolution SE images of the twisted bilayer MoS2 show a honeycomb structure composed of Mo and S atoms, elucidating the monolayer structure of MoS2. Simultaneously captured annular dark-field scanning transmission electron microscope images from the same region show the projected structure of the two layers. That is, the SE images from the bilayer MoS2 selectively visualize the surface monolayer. It is noted that SE yields from the surface monolayer are approximately 3 times higher than those from the second monolayer, likely attributable to attenuation when SEs emitted from the second layer traverse the surface layer. Mini abstract: The surface sensitivity of atomic resolution secondary electron imaging is examined using MoS2 bilayers, the thinnest system composed of a surface layer and substrate. This study reveals that the secondary electrons visualize the atomic arrangement of the surface monolayer three times more intensely than that of the second layer.

利用以 30 度角堆叠的扭曲双层 MoS2,研究了高分辨率二次电子(SE)成像的表面灵敏度。扭曲双层 MoS2 的高分辨率 SE 图像显示了由 Mo 原子和 S 原子组成的蜂巢结构,从而阐明了 MoS2 的单层结构。从同一区域同时拍摄的环形暗场扫描透射电子显微镜图像显示了两层的投影结构。也就是说,双层 MoS2 的 SE 图像可选择性地观察到表面单层。值得注意的是,来自表面单层的 SE 产率大约是来自第二单层的 SE 产率的 3 倍,这可能是由于从第二层发射的 SE 穿过表面层时产生了衰减。小摘要:本研究利用由表层和基底组成的最薄系统--MoS2 双层膜,对原子分辨率二次电子成像的表面灵敏度进行了研究。研究发现,二次电子对表面单层原子排列的观察强度是第二层的三倍。
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引用次数: 0
Surface potential distribution of resist exposed by electron beam and the non-charging exposure conditions. 电子束和非充电曝光条件下光刻胶的表面电位分布。
Pub Date : 2024-09-20 DOI: 10.1093/jmicro/dfae044
Masatoshi Kotera, Yoshinobu Kono

In this study, we experimentally analyzed the charging phenomenon when an insulating resist film on a conductive layer formed on bulk glass is irradiated by electron beams. To quantify the charging potential induced, an electrostatic force microscope device was installed in the scanning electron microscope sample chamber, and potential distributions formed under various exposure conditions were obtained. Based on the results obtained, a model for charge accumulation within the sample, explaining positive and negative charging and their transitions, was developed. At an electron beam acceleration voltage of 30 kV, the following observations were made: "global charging" could be avoided by applying -5V to the sample. Regarding "local charging" near the exposure area of the electron beam, at low exposure doses, emission of secondary electrons from the sample surface induced positive charging, while the accumulation of incident electrons within the sample induced negative charging. At exposure doses where the effects of both are balanced, the sample exhibited zero potential, revealing the appearance of the "first zero-cross exposure dose". At higher exposure doses, the sample transitions from negative to positive as the exposure dose increases due to the electron beam induced conduction, resulting in the so-called "second zero-cross exposure dose". The exposure dose dependence of the charging potential distribution at various acceleration voltages was obtained. In particular, we found that at an acceleration voltage of 0.6 kV, the sample surface is not charged even when exposed to small to very large doses of electron beams.

在这项研究中,我们通过实验分析了在大块玻璃上形成的导电层上的绝缘抗蚀膜在电子束照射下的充电现象。为了量化引起的充电电势,我们在扫描电子显微镜样品室中安装了静电力显微镜装置,并获得了在不同照射条件下形成的电势分布。根据所获得的结果,建立了样品内部的电荷积累模型,解释了正负电荷及其转换。在 30 千伏的电子束加速电压下,得出了以下结论:对样品施加 -5V 电压可避免 "整体充电"。至于电子束照射区域附近的 "局部充电",在低照射剂量下,样品表面发射的二次电子会引起正充电,而入射电子在样品内部的积累则会引起负充电。在两者影响平衡的曝光剂量下,样品显示出零电位,出现了 "第一个零交叉曝光剂量"。在较高的曝光剂量下,由于电子束诱导传导,随着曝光剂量的增加,样品会从负电位转变为正电位,这就是所谓的 "第二次零交叉曝光剂量"。我们获得了不同加速电压下充电电势分布的曝光剂量依赖性。我们特别发现,在加速电压为0.6千伏时,即使暴露在小剂量到超大剂量的电子束中,样品表面也不会带电。
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引用次数: 0
Development of a localized surface plasmon-enhanced electron beam-pumped nanoscale light source for electron beam excitation-assisted optical microscopy. 开发用于电子束激发辅助光学显微镜的局部表面等离子体增强电子束泵浦纳米级光源。
Pub Date : 2024-09-16 DOI: 10.1093/jmicro/dfae043
Atsushi Nakamura, Shunpei Shiba, Kei Hosomi, Atsushi Ono, Yoshimasa Kawata, Wataru Inami

We have demonstrated localized surface plasmon (LSP)-enhanced cathodoluminescence (CL) from an atomic layer deposition (ALD)-grown Al2O3/ZnO/Al2O3 heterostructure to develop a bright nanometer-scale light source for an electron beam excitation-assisted (EXA) optical microscope. Three types of metals, Ag, Al, and Au, were compared, and an 181-fold enhancement of CL emission was achieved with Ag nanoparticles (NPs), with the plasmon resonance wavelength close to the emission wavelength energy of ZnO. The enhanced emission is plausibly attributed to LSP/exciton coupling. However, it is also attributed to an increase in coupling efficiency with penetration depth and also to an increase in light extraction efficiency by grading the refractive indices at the heterostructure.

我们展示了原子层沉积(ALD)生长的 Al2O3/ZnO/Al2O3 异质结构的局部表面等离子体(LSP)增强阴极荧光(CL),为电子束激发辅助(EXA)光学显微镜开发了一种明亮的纳米级光源。通过对 Ag、Al 和 Au 三种金属进行比较,Ag 纳米粒子(NPs)的 CL 发射增强了 181 倍,等离子共振波长接近 ZnO 的发射波长能量。发射增强可能归因于 LSP/激子耦合。不过,这也归因于耦合效率随穿透深度的增加而提高,以及异质结构的折射率分级提高了光萃取效率。
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引用次数: 0
Precise measurement of spatial coherence and axial brightness based on the Wigner function reconstruction in transmission electron microscopes with field emission guns and a thermionic emission gun. 在配备场发射枪和热离子发射枪的透射电子显微镜中,根据维格纳函数重构精确测量空间相干性和轴向亮度。
Pub Date : 2024-08-29 DOI: 10.1093/jmicro/dfae040
Shuhei Hatanaka, Jun Yamasaki

The spatial coherence and the axial brightness of a cold field emission gun, a Schottky field emission gun and a $mathrm{LaB}_6$ thermionic gun are precisely measured. By analyzing the Airy pattern from a selected area aperture, various parameters including the spatial coherence length are determined. Using the determined coherence length, the axial brightness of the field emission guns is estimated using the equation which we previously derived based on the discussion of the Wigner function of an electron beam. We also make some extensions in the method to be applicable to the measurements of the thermionic gun, which has anisotropic intensity distribution in most case unlike the field emission guns. Not conventional average brightness but the axial brightness measured for the three kinds of emitters are compared accurately and precisely without influenced by the measurement conditions.

精确测量了冷场发射枪、肖特基场发射枪和 $mathrm{LaB}_6$ 热离子枪的空间相干性和轴向亮度。通过分析选定区域孔径的艾里模式,可以确定包括空间相干长度在内的各种参数。利用确定的相干长度,通过我们之前在讨论电子束维格纳函数的基础上推导出的方程,可以估算出场发射枪的轴向亮度。我们还对该方法进行了一些扩展,使其适用于热离子枪的测量,因为热离子枪与场发射枪不同,在大多数情况下具有各向异性的强度分布。在不受测量条件影响的情况下,我们对三种发射器测得的轴向亮度进行了精确的比较,而不是传统的平均亮度。
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引用次数: 0
期刊
Microscopy (Oxford, England)
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