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Biotin/avidin-free sandwich aptamer-based lateral flow assay (ALFA) for the diagnosis of Trichomonas vaginalis 基于无生物素/亲和素三明治适体的侧流试验诊断阴道毛滴虫
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2025-01-22 DOI: 10.1039/D4SD00342J
Christine Aubrey C. Justo, Vasso Skouridou, Piet Cools, Guy Mulinganya, Alexandra Ibáñez-Escribano and Ciara K. O'Sullivan

The development of low-cost, rapid point-of-care tests (POCT) for the detection of the parasite Trichomonas vaginalis is listed in the recent WHO global research priorities for sexually transmitted infections (STIs). Aiming to contribute to this call and aid in ending STIs as a public health threat, we report the development of a DNA aptamer-based POCT for T. vaginalis. Herein, we report an aptamer-based lateral flow assay (ALFA) based on dual aptamers for the detection of T. vaginalis. This is the first report of an ALFA that does not rely on biotin/streptavidin for either capture or reporter molecule. Aptamer capture and recognition relies on the use of an UV-crosslinked aminated capture aptamer on the nitrocellulose membrane and gold nanoparticles (AuNPs) functionalized with a thioctic acid-modified reporter aptamer. The developed ALFA has an estimated laboratory production cost of less than 1 € per test, with the running buffer and the ALFA strip stable for at least 1 year at room temperature (22 °C). The assay requires three simple operator steps from sample procurement to result with a 15-minute runtime. The developed ALFA can detect down to 1.6 × 105T. vaginalis per mL and shows no cross-reactivity to common vaginal microorganisms and no matrix effect from clinical cervicovaginal lavage (CVL) samples is observed. Preliminary clinical evaluation using CVLs demonstrated that the assay has perfect concordance with wet-mount assay on matching vaginal swabs. The developed rapid test offers a simple, stable, and low-cost diagnostic test for T. vaginalis.

开发用于检测阴道毛滴虫寄生虫的低成本、快速的即时检测方法(POCT)被列入世卫组织最近关于性传播感染的全球研究重点。为了促进这一呼吁,并帮助结束作为公共卫生威胁的性传播感染,我们报告了基于DNA适体的阴道绦虫POCT的发展。在此,我们报告了一种基于双适体的检测阴道绦虫的适体侧流试验(ALFA)。这是首次报道不依赖生物素/链亲和素捕获或报告分子的ALFA。适配体捕获和识别依赖于使用紫外交联胺化捕获适配体在硝化纤维素膜和金纳米颗粒(AuNPs)功能化与硫硫酸修饰的报告体适配体。开发的ALFA每次测试的实验室生产成本估计低于1欧元,运行缓冲液和ALFA条带在室温(22°C)下稳定至少1年。该分析需要三个简单的操作步骤,从样品采购到结果,运行时间为15分钟。开发的ALFA可以检测到1.6 × 105T。对普通阴道微生物无交叉反应性,临床宫颈阴道灌洗(CVL)样品无基质效应。使用CVLs进行的初步临床评估表明,该检测方法与湿法检测方法在匹配阴道拭子上具有完美的一致性。开发的快速检测提供了一种简单、稳定、低成本的阴道绦虫诊断方法。
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引用次数: 0
Minimally and non-invasive glucose monitoring: the road toward commercialization 微创无创血糖监测:走向商业化之路
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2025-01-21 DOI: 10.1039/D4SD00360H
Shunhua Min, Haoyang Geng, Yuheng He, Tailin Xu, Qingzhou Liu and Xueji Zhang

The increasing global prevalence of diabetes has led to significant advancements in glucose monitoring technologies. Since the introduction of enzyme-based glucose biosensors in the 1960s, these devices have evolved to enable real-time and dynamic glucose monitoring, with electrochemical biosensors playing a crucial role. Recent innovations have expanded glucose sensing into non-invasive and minimally invasive methods, utilizing optical, millimeter wave, ultrasound, and bioimpedance techniques to provide user-friendly and painless alternatives. This review examines the current state and future prospects of glucose monitoring technologies, particularly focusing on wearable sensors for in vivo applications. It explores the key mechanisms of electrochemical and alternative sensing methods, highlighting their evolution, adaptability to different biofluids, and integration into multiplexed systems for improved diabetes management. Emerging wearable devices offer continuous and real-time feedback, which is essential for effective glucose regulation. The review also addresses challenges such as biocompatibility, accuracy in fluctuating physiological conditions, and external factors that can affect sensor performance. Furthermore, it analyzes the commercial landscape, from established continuous glucose monitors to next-generation technologies, highlighting opportunities for personalized care. The aim of this review is to guide future research in developing advanced and efficient glucose monitoring solutions tailored to meet patient needs.

全球糖尿病患病率的上升导致了血糖监测技术的显著进步。自20世纪60年代引入基于酶的葡萄糖生物传感器以来,这些设备已经发展到能够实时和动态监测葡萄糖,其中电化学生物传感器起着至关重要的作用。最近的创新已经将葡萄糖传感扩展到非侵入性和微创性方法,利用光学、毫米波、超声波和生物阻抗技术提供用户友好和无痛的替代方法。本文综述了葡萄糖监测技术的现状和未来前景,特别关注体内应用的可穿戴传感器。它探讨了电化学和替代传感方法的关键机制,强调了它们的进化,对不同生物流体的适应性,以及集成到多路复用系统中以改善糖尿病管理。新兴的可穿戴设备提供持续和实时的反馈,这对有效的血糖调节至关重要。该综述还解决了诸如生物相容性、波动生理条件下的准确性以及可能影响传感器性能的外部因素等挑战。此外,它还分析了商业前景,从已建立的连续血糖监测仪到下一代技术,强调了个性化护理的机会。这篇综述的目的是指导未来研究开发先进和有效的血糖监测解决方案,以满足患者的需求。
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引用次数: 0
A new perspective on the AIE and ACQ of phosphinine-anchored luminescent materials as visual and ratiometric sensors for Ag+ and Hg2+ ion detection in live cells† 磷化氢锚定发光材料的AIE和ACQ作为活细胞中Ag+和Hg2+离子检测的视觉和比例传感器的新视角
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2025-01-16 DOI: 10.1039/D4SD00345D
Saravanan Enbanathan, Umamahesh Balijapalli, Manojkumar Dhanthala Thiyagarajan, Selin Manojkumar, Saravanakumar Manickam and Sathiyanarayanan Kulathu Iyer

The effective synthesis of phosphinine-based (E)-2-((2,6-dicyano-1,1-diphenyl-λ5-phosphinin-4-yl)methylene) hydrazine-1-carbothioamide (MHC) and (E)-4-((2-(benzo[d]thiazol-2-yl)hydrazineylidene)methyl)-1,1-diphenyl-λ5-phosphinine-2,6-dicarbonitrile (BHP) sensor materials resulted in the characterization of their notable photophysical characteristics, including aggregation, solvatochromism, and sensing ability. Upon application, the ratiometric emission properties of the MHC and BHP probes were evaluated, and they exhibited noteworthy selectivity and sensitivity for silver (Ag+) and mercury (Hg2+) ions over other metal ions. After conducting a thorough photophysical investigation, the detection limits (LODs) for Ag+ and Hg2+ were determined to be as low as 8.7 and 8.6 nM for MHC and 280 and 340 pM for BHP, respectively. In addition, MHC and BHP were examined as capable sensing materials for Ag+ and Hg2+ ions on paper strip-based sensors and bio-images. 1H NMR titration, HRMS analysis and DFT studies validated the binding processes of MHC and BHP with Ag+ and Hg2+ ions. These findings contribute to the future development of practical onsite detection of Ag+ and Hg2+ ions in ecological systems.

基于磷化氢的(E)-2-((2,6-二氰-1,1-二苯基-λ5-磷-4-基)亚甲基)肼-1-碳硫酰胺(MHC)和(E)-4-(2-(苯并[d]噻唑-2-基)肼基)甲基)-1,1-二苯基-λ5-磷-2,6-二腈(BHP)传感器材料的有效合成,表征了它们显著的光物理特性,包括聚集性、溶剂变色性和传感能力。应用后,对MHC和BHP探针的比值发射特性进行了评价,发现它们对银(Ag+)和汞(Hg2+)离子的选择性和灵敏度高于其他金属离子。经过全面的光物理研究,确定了MHC的Ag+和Hg2+的检出限(lod)分别低至8.7和8.6 nM, BHP为280和340 pM。此外,MHC和BHP作为Ag+和Hg2+离子在纸条传感器和生物图像上的传感材料进行了测试。1H NMR滴定、HRMS分析和DFT研究验证了MHC和BHP与Ag+和Hg2+离子的结合过程。这些发现有助于未来生态系统中Ag+和Hg2+离子的实际现场检测。
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引用次数: 0
Avoiding commercial kit-based DNA isolation and purification steps: a rapid method for Cryptosporidium oocyst detection† 避免基于商业试剂盒的DNA分离和纯化步骤:隐孢子虫卵囊检测的快速方法
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2025-01-16 DOI: 10.1039/D4SD00344F
Rabbee G. Mahmudunnabi, Amandeep Singh Pannu, Nam-Trung Nguyen, Helen M. Stratton and Muhammad J. A. Shiddiky

Current routine diagnostic tests for Cryptosporidium oocysts in water are performed in centralised laboratories using the National Association of Testing Authorities (NATA) approved USEPA Method 1623.1. This method uses fluorescent microscopy, which suffers from artefacts and false positive responses from contaminating oocyst-size particles. Additionally, existing molecular detection methods based on real-time PCR (qPCR) require purified nucleic acid, primarily relying on laborious, time-consuming, and expensive centralised laboratory-based DNA isolation procedures using commercial kits. Both the microscopy and PCR-based molecular techniques are not suitable for rapid detection due to the nature of the experiment and instrumentation. This study reports a rapid and simple method that eliminates the need for multi-step DNA isolation and purification procedures. The method involves the direct heat lysis of magnetically isolated Cryptosporidium oocysts from water samples, followed by a loop-mediated isothermal amplification (LAMP)-based detection. The analytical performance of this assay reveals a LOD of 0.17 copies per μL of genomic DNA (gDNA) with a dynamic range from 1.05 × 104 copies per μL to 1.05 copies per μL. We simulated the matrix effect by putting mud into tap water and spiked oocysts to demonstrate the practical applicability of the assay. The designed LAMP detected as low as 5 and 10 oocysts per 10 mL of tap water without and with simulated matrices, respectively. The ultrasensitive nature of this assay can be attributed to its acceleration due to targeting an intron-less gene. We propose that this simple and rapid method can be extended to detect various types of pathogens.

目前对水中隐孢子虫卵囊的常规诊断测试是在中央实验室使用国家测试机构协会(NATA)批准的USEPA方法1623.1进行的。这种方法使用荧光显微镜,由于污染卵囊大小的颗粒,会产生伪影和假阳性反应。此外,现有的基于实时PCR (qPCR)的分子检测方法需要纯化的核酸,主要依赖于费力、耗时和昂贵的基于集中式实验室的DNA分离程序,使用商业试剂盒。由于实验和仪器的性质,显微镜和基于pcr的分子技术都不适合快速检测。本研究报告了一种快速和简单的方法,消除了对多步骤DNA分离和纯化程序的需要。该方法包括直接热分解从水样中磁分离的隐孢子虫卵囊,然后进行环介导的等温扩增(LAMP)检测。该方法的LOD为0.17 copies / μL,动态范围为1.05 × 104 copies / μL ~ 1.05 copies / μL。我们通过在自来水和卵囊中加入泥浆来模拟基质效应,以证明该方法的实用性。设计的LAMP在无模拟基质和含模拟基质的自来水中分别检测到每10 mL低至5个和10个卵囊。该检测的超灵敏性质可归因于其由于靶向内含子较少的基因而加速。我们建议,这种简单快速的方法可以推广到检测各种类型的病原体。
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引用次数: 0
Optimizing the preparation of laser-derived 3D porous graphene electrodes for modification-free sensing of heavy metal ions† 优化制备激光衍生的三维多孔石墨烯电极,用于重金属离子的无修饰传感
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2025-01-16 DOI: 10.1039/D4SD00290C
Ismaila Diédhiou, Amal Raouafi, Sami Hamzaoui, Modou Fall and Noureddine Raouafi

Heavy metallic cations are prevalent in the environment and have detrimental effects on human health and flora. Research into methods for their detection is increasing. Laser-derived graphene electrodes (LDGEs) have gained popularity in electrochemical applications owing to their straightforward preparation, cost-effectiveness, porous structure, high specific surface area, and advantageous electronic properties. In this study, we showed that the fine-tuning of laser beam parameters, such as power and speed, as well as the electrochemical detection parameters, allowed detecting heavy metal ions, specifically Cd2+ and Pb2+, using carefully optimized porous LDGEs, without the need of adding any other metals such as Bi3+. The optimal LDGEs, respectively fabricated with a laser power and speed of 6.4 W and 30 cm s−1 were characterized using electrochemical measurements, digital imaging, scanning electron microscopy, and Raman spectroscopy, confirming the 3D porous structure. The LDGEs were then subjected to square-wave anodic stripping voltammetry for the simultaneous detection of Cd2+ and Pb2+ in a 0.1 M acetate-buffered solution at pH 4. The key metrics for the LDGE-based sensor were as follows: sensitivities of 0.45 (Cd2+) and 0.93 (Pb2+) μA ppb−1 cm−2, linear ranges spanning from 25 to 1000 ppb (Cd2+) and 10 to 500 ppb (Pb2+), and detection limits of 6.13 ppb (Cd2+) and 2.96 ppb (Pb2+) (at S/N = 3).The electrochemical sensor could simultaneously detect Cd2+ and Pb2+ in real samples, including ore and tap water. This underscores the applicability and versatility of the optimized LDGEs for heavy-metal ion detection in complex environmental matrices.

重金属阳离子在环境中普遍存在,对人体健康和植物群有不利影响。对其检测方法的研究正在增加。激光衍生的石墨烯电极(LDGEs)由于其制备简单、成本效益高、多孔结构、高比表面积和优越的电子性能而在电化学应用中得到了广泛的应用。在这项研究中,我们表明,微调激光束参数,如功率和速度,以及电化学检测参数,允许检测重金属离子,特别是Cd2+和Pb2+,使用精心优化的多孔ldge,而不需要添加任何其他金属,如Bi3+。采用电化学测量、数字成像、扫描电镜和拉曼光谱等方法,对激光功率和速度分别为6.4 W和30 cm s−1的最佳LDGEs进行了表征,证实了其三维多孔结构。然后用方波阳极溶出伏安法在pH为4的0.1 M醋酸盐缓冲溶液中同时检测Cd2+和Pb2+。该传感器的灵敏度分别为0.45 (Cd2+)和0.93 (Pb2+) μA ppb−1 cm−2,线性范围为25 ~ 1000 ppb (Cd2+)和10 ~ 500 ppb (Pb2+),检出限分别为6.13 ppb (Cd2+)和2.96 ppb (Pb2+) (S/N = 3)。该传感器可同时检测矿石和自来水等实际样品中的Cd2+和Pb2+。这强调了优化后的LDGEs在复杂环境矩阵中重金属离子检测的适用性和多功能性。
{"title":"Optimizing the preparation of laser-derived 3D porous graphene electrodes for modification-free sensing of heavy metal ions†","authors":"Ismaila Diédhiou, Amal Raouafi, Sami Hamzaoui, Modou Fall and Noureddine Raouafi","doi":"10.1039/D4SD00290C","DOIUrl":"https://doi.org/10.1039/D4SD00290C","url":null,"abstract":"<p >Heavy metallic cations are prevalent in the environment and have detrimental effects on human health and flora. Research into methods for their detection is increasing. Laser-derived graphene electrodes (LDGEs) have gained popularity in electrochemical applications owing to their straightforward preparation, cost-effectiveness, porous structure, high specific surface area, and advantageous electronic properties. In this study, we showed that the fine-tuning of laser beam parameters, such as power and speed, as well as the electrochemical detection parameters, allowed detecting heavy metal ions, specifically Cd<small><sup>2+</sup></small> and Pb<small><sup>2+</sup></small>, using carefully optimized porous LDGEs, without the need of adding any other metals such as Bi<small><sup>3+</sup></small>. The optimal LDGEs, respectively fabricated with a laser power and speed of 6.4 W and 30 cm s<small><sup>−1</sup></small> were characterized using electrochemical measurements, digital imaging, scanning electron microscopy, and Raman spectroscopy, confirming the 3D porous structure. The LDGEs were then subjected to square-wave anodic stripping voltammetry for the simultaneous detection of Cd<small><sup>2+</sup></small> and Pb<small><sup>2+</sup></small> in a 0.1 M acetate-buffered solution at pH 4. The key metrics for the LDGE-based sensor were as follows: sensitivities of 0.45 (Cd<small><sup>2+</sup></small>) and 0.93 (Pb<small><sup>2+</sup></small>) μA ppb<small><sup>−1</sup></small> cm<small><sup>−2</sup></small>, linear ranges spanning from 25 to 1000 ppb (Cd<small><sup>2+</sup></small>) and 10 to 500 ppb (Pb<small><sup>2+</sup></small>), and detection limits of 6.13 ppb (Cd<small><sup>2+</sup></small>) and 2.96 ppb (Pb<small><sup>2+</sup></small>) (at S/N = 3).The electrochemical sensor could simultaneously detect Cd<small><sup>2+</sup></small> and Pb<small><sup>2+</sup></small> in real samples, including ore and tap water. This underscores the applicability and versatility of the optimized LDGEs for heavy-metal ion detection in complex environmental matrices.</p>","PeriodicalId":74786,"journal":{"name":"Sensors & diagnostics","volume":" 3","pages":" 202-215"},"PeriodicalIF":3.5,"publicationDate":"2025-01-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://pubs.rsc.org/en/content/articlepdf/2025/sd/d4sd00290c?page=search","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143612028","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Construction of a self-assembled duplexed aptasensor for the simultaneous detection of haemoglobin and glycated haemoglobin† 用于同时检测血红蛋白和糖化血红蛋白†的自组装双配体传感器的构建
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2025-01-10 DOI: 10.1039/D4SD00303A
Xue-Qing Feng, Yi-Ning Su, Qing Li, Zhong-Gan Jin, Ming Wang, Xi-Le Hu, Lei Zou, Yi Ju, Xiao-Peng He and Bang-Ce Ye

With the prevalence of diabetes and its secondary complications, the effective monitoring of diabetic biomarkers is necessary. While portable analytical devices for blood glucose have been sophisticatedly developed, those for haemoglobin (Hb) and, especially haemoglobin A1c (HbA1c), a glycated form of Hb, remain elusive. Here, we developed an aptamer-based duplexed electrochemical sensor for the simultaneous detection of Hb and HbA1c. Ferrocene (Fc) and a thiol group were introduced to the 5′ and 3′-end of aptamers that bind Hb and HbA1c, respectively. While the thiol group facilitates the formation of a self-assembled monolayer of the aptamers onto a customized, duplexed screen-printed gold electrode, the presence of Fc provides the electrodes an internal electrochemical signal. Upon analyte binding, the secondary conformation of the aptamers is changed, thus leading to a quenched current signal because of an increased distance between Fc and the electrode surface. Our duplexed electrochemical sensor showed a good linearity for both analytes over a wide concentration range, and has proved effective in simultaneously quantifying Hb and HbA1c in calibration samples.

随着糖尿病及其继发性并发症的流行,对糖尿病生物标志物的有效监测是必要的。虽然便携式血糖分析设备已经发展得很成熟,但血红蛋白(Hb),特别是血红蛋白A1c(一种糖化形式的Hb)的分析设备仍然难以捉摸。在这里,我们开发了一种基于适配体的双工电化学传感器,用于同时检测Hb和HbA1c。二茂铁(Fc)和巯基分别被引入到结合Hb和HbA1c的适体的5 ‘和3 ’端。巯基有助于在定制的双工丝网印刷金电极上形成自组装的适配体单层,而Fc的存在为电极提供了内部电化学信号。在分析物结合后,适配体的二级构象被改变,从而导致电流信号淬灭,因为Fc和电极表面之间的距离增加。我们的双路电化学传感器对两种分析物在很宽的浓度范围内具有良好的线性,并且在校准样品中同时定量Hb和HbA1c被证明是有效的。
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引用次数: 0
NHS-ester conjugated gold nanoparticles for spermine detection: a potential tool in meat spoilage monitoring† 用于精胺检测的nhs -酯共轭金纳米颗粒:肉类腐败监测的潜在工具
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2025-01-06 DOI: 10.1039/D4SD00320A
Teody Gumabat, Jeanne Phyre Lagare Oracion, Jolina Fedelis, Ethel Keleste, Rey Capangpangan, Noel Lito Sayson, Gerard Dumancas, Arnold Alguno and Felmer Latayada

Spermine, a key biogenic amine indicating food freshness, is typically detected using costly and time-consuming chromatographic methods. This study introduces a more efficient, eco-friendly alternative—a label-free colorimetric sensing platform using gold nanoparticles (AuNPs) functionalized with 11-mercaptoundecanoic acid and capped with an N-hydroxysuccinimide (NHS)-ester. Transmission electron microscopy revealed monodisperse, spherical AuNPs (13 nm), with an increase in size upon functionalization. Fourier transform infrared spectra confirmed successful functionalization. The hydrodynamic size of the AuNPs increased from 17.26 nm to 2167 nm, and the zeta potential shifted from −48.86 mV to −35.59 mV. The platform takes advantage of the selective interaction between spermine and NHS-ester-functionalized AuNPs, inducing nanoparticle aggregation, as shown by a red shift in surface plasmon resonance (SPR). UV-vis spectroscopy demonstrated a robust linear correlation (R2 = 0.958) between spermine concentration (1.0–4.0 μM) and nanoparticle aggregation index, with a limit of detection (LOD) of 0.77 μM. The sensor also exhibited high reproducibility in pork extract matrices (coefficient of variation <5%) and selectivity for spermine amid various interfering analytes. Its eco-friendly design and rapid response time position it as a viable tool for real-time spermine monitoring in food spoilage, offering comparable performance metrics to traditional chromatographic techniques while addressing sustainability concerns.

精胺是一种重要的指示食品新鲜度的生物胺,通常使用昂贵且耗时的色谱方法进行检测。本研究介绍了一种更高效、更环保的替代方案——一种无标记比色传感平台,该平台使用11-巯基十四酸功能化的金纳米颗粒(AuNPs),并以n -羟基琥珀酰亚胺(NHS)酯为覆盖层。透射电镜显示单分散的球形AuNPs (13 nm),随着功能化尺寸的增加。傅里叶变换红外光谱证实了功能化的成功。AuNPs的水动力尺寸从17.26 nm增加到2167 nm, zeta电位从- 48.86 mV增加到- 35.59 mV。该平台利用精胺和nhs -酯功能化的AuNPs之间的选择性相互作用,诱导纳米粒子聚集,如表面等离子体共振(SPR)的红移所示。精胺浓度(1.0 ~ 4.0 μM)与纳米颗粒聚集指数呈良好的线性相关(R2 = 0.958),检出限(LOD)为0.77 μM。该传感器在猪肉提取物基质中具有高重复性(变异系数<;5%),在各种干扰物中具有精胺选择性。它的环保设计和快速响应时间使其成为食品腐败中实时监测精胺的可行工具,提供与传统色谱技术相当的性能指标,同时解决了可持续性问题。
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引用次数: 0
Rapid and automated interpretation of CRISPR-Cas13-based lateral flow assay test results using machine learning† 使用机器学习快速和自动解释基于crispr - cas13的侧流分析测试结果。
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-12-26 DOI: 10.1039/D4SD00314D
Mengyuan Xue, Diego H. Gonzalez, Emmanuel Osikpa, Xue Gao and Peter B. Lillehoj

CRISPR-Cas-based lateral flow assays (LFAs) have emerged as a promising diagnostic tool for ultrasensitive detection of nucleic acids, offering improved speed, simplicity and cost-effectiveness compared to polymerase chain reaction (PCR)-based assays. However, visual interpretation of CRISPR-Cas-based LFA test results is prone to human error, potentially leading to false-positive or false-negative outcomes when analyzing test/control lines. To address this limitation, we have developed two neural network models: one based on a fully convolutional neural network and the other on a lightweight mobile-optimized neural network for automated interpretation of CRISPR-Cas-based LFA test results. To demonstrate proof of concept, these models were applied to interpret results from a CRISPR-Cas13-based LFA for the detection of the SARS-CoV-2 N gene, a key marker for COVID-19 infection. The models were trained, evaluated, and validated using smartphone-captured images of LFA devices in various orientations with different backgrounds, lighting conditions, and image qualities. A total of 3146 images (1569 negative, 1577 positive) captured using an iPhone 13 or Samsung Galaxy A52 Android smartphone were analyzed using the trained models, which classified the LFA results within 0.2 s with 96.5% accuracy compared to the ground truth. These results demonstrate the potential of machine learning to accurately interpret test results of CRISPR-Cas-based LFAs using smartphone-captured images in real-world settings, enabling the practical use of CRISPR-Cas-based diagnostic tools for self- and at-home testing.

与基于聚合酶链反应(PCR)的检测相比,基于crispr - cas的侧流分析(LFAs)已经成为一种很有前途的超灵敏核酸检测诊断工具,它提供了更快、更简单和更具成本效益的方法。然而,基于crispr - cas的LFA检测结果的视觉解释容易出现人为错误,在分析测试/控制线时可能导致假阳性或假阴性结果。为了解决这一限制,我们开发了两种神经网络模型:一种基于全卷积神经网络,另一种基于轻量级移动优化神经网络,用于自动解释基于crispr - cas的LFA测试结果。为了证明概念证明,这些模型被应用于解释基于crispr - cas13的LFA检测sars - cov - 2n基因的结果,该基因是COVID-19感染的关键标志物。使用智能手机在不同方向、不同背景、光照条件和图像质量下拍摄的LFA设备图像,对模型进行训练、评估和验证。使用训练好的模型分析了使用iPhone 13或三星Galaxy A52 Android智能手机拍摄的3146张图像(1569张阴性,1577张阳性),与地面真实情况相比,LFA结果在0.2秒内分类,准确率为96.5%。这些结果证明了机器学习的潜力,可以使用智能手机在现实环境中捕获的图像准确解释基于crispr - cas的LFAs的测试结果,从而使基于crispr - cas的诊断工具在自我和家庭测试中得到实际应用。
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引用次数: 0
Detection of C-reactive protein using single cluster analysis of gold nanoparticle aggregates using a dark-field microscope equipped with a smartphone† 利用配备智能手机的暗场显微镜对金纳米颗粒聚集体进行单聚类分析,检测c反应蛋白
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-12-23 DOI: 10.1039/D4SD00329B
Nanami Fukuzumi, Takako Nakagawa, Gen Hirao, Atsushi Ogawa, Mizuo Maeda, Tsuyoshi Asahi and Tamotsu Zako

Gold nanoparticles (AuNPs), which have been used as colorimetric biosensors, show strong light scattering, allowing individual AuNPs to be identified using a dark-field microscope (DFM). In this study, we developed a method of observing the target molecule-derived aggregation of AuNPs modified with DNA aptamers at the single-cluster level using the DFM. C-Reactive protein (CRP) is an important clinical biomarker of inflammatory and cardiovascular diseases, for which a simple, inexpensive, and sensitive detection method is needed. In this study, the CRP-mediated aggregate formation of CRP aptamer-modified AuNPs was evaluated with single-cluster analysis using the DFM, and the detection limit was 17 nM, which was sufficient as a diagnostic indicator for CRP. We also developed a portable DFM equipped with a smartphone and a stage adjustment system, which enables single-cluster observation of AuNPs, and showed that 50 nM of CRP could be detected, indicating that this approach is suitable for point-of-care diagnosis. With the selection of appropriate aptamers, this method can be applied for the detection of various molecules.

金纳米颗粒(AuNPs),已被用作比色生物传感器,表现出强烈的光散射,允许使用暗场显微镜(DFM)识别单个AuNPs。在这项研究中,我们开发了一种使用DFM在单簇水平上观察被DNA适体修饰的AuNPs的靶分子衍生聚集的方法。c -反应蛋白(CRP)是炎症和心血管疾病的重要临床生物标志物,需要一种简单、廉价、灵敏的检测方法。本研究采用DFM单聚类分析评价CRP介导的CRP适配体修饰AuNPs的聚集形成,检出限为17 nM,足以作为CRP的诊断指标。我们还开发了一种配备智能手机和阶段调节系统的便携式DFM,可以对aunp进行单簇观察,并显示可以检测到50 nM的CRP,表明该方法适用于即时诊断。通过选择合适的适配体,该方法可用于各种分子的检测。
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引用次数: 0
Non-organic solvent extraction of capsaicinoids from oil combined with fluorescent lateral flow immunoassay strips for on-site identification of illegally recycled waste cooking oil† 非有机溶剂萃取油中辣椒素结合荧光侧流免疫试纸对非法回收废食用油的现场鉴定
IF 3.5 Q2 CHEMISTRY, ANALYTICAL Pub Date : 2024-12-20 DOI: 10.1039/D4SD00306C
Yulian Wang, Yuxiang Wu, Deji Gesang, Zixuan Dong, Zhaoxu Qin, Qingchun Li, Jin Li, Qianxu Zhou and Guoqing Shi

The illicit use of recycled waste cooking oil poses a threat to food safety, yet there is currently a lack of on-site identification methods. This study targets a key component of recycled cooking oil, capsaicinoids, and establishes a rapid detection method for identifying illegally recycled waste cooking oil on-site. The method involves extracting capsaicinoids from the oil using a non-organic solvent extractant, and then detecting it using fluorescent lateral flow immunoassay (LFIA) strips. The preparation conditions of LFIA test strips were first optimized in this study. Subsequently, a 0.02 mol L−1 solution of dimethyl-β-cyclodextrin was optimized as the extractant for capsaicin. The optimized sample extraction conditions involve a sample-to-extractant volume ratio of 1:2 and an extraction time of 1 minute, with a total extraction and detection time not exceeding 15 minutes. This method demonstrates a limit of detection (LOD) for natural capsaicin in oil samples of 0.14 μg kg−1, with a detection range spanning 0.46 to 81 μg kg−1. The method yields recovery rates between 88.76% and 115.79%, with coefficient of variation (CV) values ranging from 1.80% to 13.37%. Cross-reactivity rates for dihydrocapsaicin and synthetic capsaicin exceed 90%, while the impact of common contaminants or additives in other edible oils on detection is minimal. In conclusion, this approach fulfills the technical criteria mandated by the China Food and Drug Administration for distinguishing capsaicin compounds in recycled oil, offering advantages such as simplicity, rapidity, and “green” operation, making it suitable for rapid on-site identification of illegally recycled waste cooking oil.

废旧地沟油的非法使用对食品安全构成威胁,但目前缺乏现场识别方法。本研究针对回收食用油的关键成分辣椒素,建立了一种现场非法回收废食用油的快速检测方法。该方法包括使用非有机溶剂萃取剂从辣椒油中提取辣椒素,然后使用荧光侧流免疫测定(LFIA)条进行检测。本研究首先对LFIA试纸条的制备条件进行了优化。以0.02 mol L−1的二甲基-β-环糊精溶液作为辣椒素的萃取剂。优化后的样品提取条件为样品与萃取剂体积比为1:2,提取时间为1分钟,总提取和检测时间不超过15分钟。该方法对油中天然辣椒素的检出限为0.14 μg kg - 1,检测范围为0.46 ~ 81 μg kg - 1。回收率为88.76% ~ 115.79%,变异系数为1.80% ~ 13.37%。二氢辣椒素和合成辣椒素的交叉反应率超过90%,而其他食用油中常见的污染物或添加剂对检测的影响很小。综上所述,该方法符合中国食品药品监督管理局对回收油中辣椒素类化合物的鉴别技术标准,具有简单、快速、“绿色”操作等优点,适用于非法回收废食用油的现场快速鉴定。
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Sensors & diagnostics
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