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The correlation between Interleukin 1 β (IL-1β) as an inflammatory marker and Malondialdehyde (MDA) as a lipid peroxidation marker and the development of cardiac and pancreatic complications in humans suspected to scorpion poisoning. 白细胞介素1β (IL-1β)作为炎症标志物和丙二醛(MDA)作为脂质过氧化标志物与怀疑蝎子中毒的人心脏和胰腺并发症的关系
IF 2.7 3区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2025-12-01 DOI: 10.1186/s40360-025-01019-6
Galila Ragab Mebed, Mahmoud Sami Zakaria, Amr Setouhi, Meriam N N Rezk
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引用次数: 0
Apocynin ameliorates liver fibrosis events in vivo through modulation of oxidative stress, inflammatory, and apoptotic mediators. 罗布麻素通过调节氧化应激、炎症和凋亡介质改善体内肝纤维化事件。
IF 2.7 3区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2025-12-01 DOI: 10.1186/s40360-025-01041-8
Khaled Abdul-Aziz Ahmed, Khalid M Alqaisi, Noralhuda Ayad Ibrahim, Sheylan Salah Abdullah, Ahmed A J Jabbar, Goran Noori Saleh, Dana K Alsharayiah, Abdulmohsen I Algefare, Mustafa Abdul-Monam, Manal A Alfwuaires, Talal Salem Al-Qaisi, Hanan Ibrahim Althagbi

The liver has a tremendous regeneration potential, yet chronic liver injury poses a life-threatening condition if not managed appropriately. Apocynin, an NADPH oxidase inhibitor, has been a central focus of attention in recent years due to its significant antioxidant/anti-inflammatory potentials. In this study, we evaluated the acute toxicity and hepatoprotective effects of Apocynin against thioacetamide (TAA)-induced liver fibrosis in rats. Liver fibrosis was induced by 200 mg/kg TAA three times/week for two months, along with treatment with distilled water (positive control), silymarin (reference, 50 mg/kg), or apocynin (50 and 100 mg/kg/day). Hepatic tissues were screened for histopathological, biochemical, and immunohistochemical changes, while hepatic homogenate was examined for the antioxidant contents (catalase, CAT; superoxide dismutase, SOD) and MDA levels. Apocynin treatment showed significant hepatoprotective effects against TAA-hepatotoxicity, evidenced by reduced hepatic tissue alterations with a slight fibroplasia, reduction of hepatomegaly, less hepatic nodules/necrosis, and recovered hepatic function. Additionally, apocynin administration reduced oxidative stress by lowering pro-oxidants (MDA) and up-regulating antioxidants (SOD and CAT). Furthermore, the anti-apoptotic and anti-fibrotic effects of apocynin were confirmed by reduced pro-apoptotic P53 proteins and β-catenin (tissue proliferation/aggregation enhancer). Apocynin treatment ameliorated ECM generation (lowered collagen bundles/fibrous septa) and reduced inflammatory (less TNf-α and IL-6 cytokines) mediators, all of which restored liver functional parameters (ALT, AST, ALP, and albumin). Apocynin attenuated TAA-mediated liver fibrosis by its modulatory potentials on several cytoprotective mechanisms associated with the oxidative stress/inflammation, making it a viable therapeutic source for liver fibrosis.

肝脏具有巨大的再生潜力,但慢性肝损伤如果处理不当会危及生命。Apocynin是一种NADPH氧化酶抑制剂,近年来由于其显著的抗氧化/抗炎潜力而成为人们关注的焦点。在本研究中,我们评估了罗布麻苷对硫代乙酰胺(TAA)诱导的大鼠肝纤维化的急性毒性和肝保护作用。用200 mg/kg TAA诱导肝纤维化,每周3次,持续2个月,同时用蒸馏水(阳性对照)、水飞蓟素(对照,50 mg/kg)或罗布麻素(50和100 mg/kg/天)治疗。对肝组织进行组织病理学、生化和免疫组化检查,同时检测肝匀浆中抗氧化剂含量(过氧化氢酶、CAT、超氧化物歧化酶、SOD)和MDA水平。罗布麻素治疗对taa肝毒性具有显著的肝保护作用,肝组织改变减少,轻度纤维增生,肝肿大减少,肝结节/坏死减少,肝功能恢复。此外,罗布麻苷通过降低促氧化剂(MDA)和上调抗氧化剂(SOD和CAT)来降低氧化应激。此外,通过减少促凋亡P53蛋白和β-catenin(组织增殖/聚集增强剂),证实了罗布麻苷的抗凋亡和抗纤维化作用。罗布麻素治疗改善了ECM的产生(减少胶原束/纤维间隔)并减少了炎症(减少TNf-α和IL-6细胞因子)介质,所有这些都恢复了肝功能参数(ALT, AST, ALP和白蛋白)。罗布麻素通过其对与氧化应激/炎症相关的几种细胞保护机制的调节潜力,减轻了taa介导的肝纤维化,使其成为肝纤维化的可行治疗来源。
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引用次数: 0
Gallic acid lessens kidney injury induced by inorganic arsenic and zinc oxide nanoparticles in rats via controlling electrolyte balance, oxidative stress, and Nrf-2 and HSP-90 expression. 没食子酸通过控制电解质平衡、氧化应激和Nrf-2和HSP-90的表达,减轻无机砷和氧化锌纳米颗粒引起的大鼠肾损伤。
IF 2.7 3区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2025-11-29 DOI: 10.1186/s40360-025-01044-5
Yasmina M Abd-Elhakim, Mohamed M M Hashem, Khaled Abo-El-Sooud, Mohamed R Mousa, Bayan A Hassan

Inorganic arsenical compounds, such as arsenic trioxide (ATO), are toxic environmental contaminants that occur widely in soil, water, and biological systems. Besides, zinc oxide nanoparticles (ZNPs) have been recently incorporated in various industrial and medicinal applications. Thus, their co-existence in the environment could widely occur. This study examined the potential protective activity of gallic acid (GA, 20 mg/kg b. wt) against the harmful impacts of 60-day co-exposure to ATO (8 mg ATO/kg b. wt) and ZNPs (100 mg ZNPs/kg b. wt) on the kidneys of rats. The results indicated that ZNPs and/or ATO exposure resulted in increased serum levels of markers associated with renal damage, an imbalance in electrolytes (sodium, potassium, and calcium), diminished levels of antioxidant enzymes in the kidneys, and an increased malondialdehyde (MDA) concentration. Furthermore, ZNPs and/or ATO co-exposed rats demonstrated markedly increased levels of renal zinc (Zn) and arsenic (As), accompanied by pronounced histopathological alterations, including interstitial nephritis, renal tubular necrosis, and vascular wall thickening. Immunohistochemical analysis revealed that exposure to ZNPs and/or ATO reduced the expression of nuclear factor erythroid 2-related factor 2 (Nrf2) while increasing that of heat shock protein 90 (HSP90) in kidney tissues. Co-exposure to ZNPs and ATO produced more pronounced alterations, including increased serum uric acid and creatinine, decreased sodium levels, reduced renal GPx activity, increased MDA content, greater renal accumulation of As and Zn, and diminished Nrf2 expression, compared with individual exposures, suggesting additive toxic effects. However, GA notably reduced renal tissue damage, oxidative stress, and disturbances in renal function and electrolyte balance in rats co-exposed to ZNPs and ATO. Conclusively, the study found that exposure to ZNPs and ATO, especially when combined, was toxic to the kidneys, leading to impaired renal function through increased oxidative stress and disrupted electrolyte balance. However, GA effectively protected kidney health at the administered doses by counteracting these effects through its antioxidant properties and by modulating cellular defense mechanisms involving Nrf2 and HSP90.

无机砷化合物,如三氧化二砷(ATO),是有毒的环境污染物,广泛存在于土壤、水和生物系统中。此外,氧化锌纳米颗粒(ZNPs)最近已被纳入各种工业和医疗应用。因此,它们在环境中的共存可能会广泛发生。本研究检测了没食子酸(GA, 20 mg/kg b. wt)对大鼠肾脏共同暴露于ATO (8 mg ATO/kg b. wt)和ZNPs (100 mg ZNPs/kg b. wt) 60天的有害影响的潜在保护活性。结果表明,ZNPs和/或ATO暴露导致与肾损伤相关的血清标志物水平升高,电解质(钠、钾和钙)失衡,肾脏抗氧化酶水平降低,丙二醛(MDA)浓度升高。此外,ZNPs和/或ATO共同暴露的大鼠表现出肾脏锌(Zn)和砷(As)水平显著升高,并伴有明显的组织病理学改变,包括间质性肾炎、肾小管坏死和血管壁增厚。免疫组化分析显示,暴露于ZNPs和/或ATO可降低肾组织中核因子红细胞2相关因子2 (Nrf2)的表达,而增加热休克蛋白90 (HSP90)的表达。与单独暴露相比,ZNPs和ATO共同暴露产生了更明显的改变,包括血清尿酸和肌酐升高、钠水平降低、肾脏GPx活性降低、MDA含量增加、肾脏As和Zn积聚增加、Nrf2表达减少,表明了加性毒性作用。然而,GA显著降低了ZNPs和ATO共暴露大鼠的肾组织损伤、氧化应激以及肾功能和电解质平衡紊乱。最后,该研究发现,暴露于ZNPs和ATO,特别是同时暴露于ZNPs和ATO时,对肾脏有毒性,通过增加氧化应激和破坏电解质平衡导致肾功能受损。然而,在给药剂量下,GA通过其抗氧化特性和调节涉及Nrf2和HSP90的细胞防御机制来抵消这些影响,从而有效地保护肾脏健康。
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引用次数: 0
Dual block evidence of the effects of topiramate, a sulfamate-substituted monosaccharide, on voltage-gated sodium current and hyperpolarization-activated cation current. 托吡酯(一种氨基磺酸取代的单糖)对电压门控钠电流和超极化激活阳离子电流影响的双阻断证据。
IF 2.7 3区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2025-11-29 DOI: 10.1186/s40360-025-01043-6
Ray-Chang Tzeng, Ming-Chi Lai, Sheng-Nan Wu, Chin-Wei Huang

Background: Topiramate (TPM) is a sulfamate-substituted monosaccharide known for its wide-ranging effects on epilepsy, neuropathic pain, and migraines. However, its precise influence on plasmalemmal ionic currents, including their magnitude and gating kinetics, remains uncertain. Therefore, a reassessment of the regulatory effect of TPM on ionic currents in electrically excitable cells is warranted.

Methods: With the aid of patch clamp technology, we investigated the effects of TPM on the amplitude, gating, and hysteresis of plasmalemmal ionic currents from GH3 lactotrophs.

Results: We observed that TPM exhibited a concentration-dependent inhibition of both transient (INa(T)) and late (INa(L)) components of INa, activated by brief depolarizing stimuli. At low concentration, TPM did not show any noticeable effect on INa(T); however, it was effective in reducing INa(L) amplitude. TPM caused a leftward shift in the midpoint of the steady-state inactivation curve of INa(T) without altering the gating charge. Importantly, the overall current density versus voltage relationship of INa(T) remained unaltered during TPM exposure. Intriguingly, the reduction in INa(T) induced by TPM could not be reversed by subsequent additions of flumazenil or chlorotoxin. Furthermore, TPM suppressed the density of the hyperpolarization-activated cation current (Ih). Simultaneously, the activation time course of Ih slowed in the presence of TPM. Moreover, TPM exposure decreased the hysteretic strength activated by double triangular ramp voltage, a change partially reversed by oxaliplatin. In current-clamp potential recordings, spontaneous action potentials were susceptible to suppression in the presence of TPM.

Conclusions: Collectively, these findings strongly suggest that TPM's effects on INa and Ih have the potential to impact the functional activities and electrical behaviors of excitable cells.

背景:托吡酯(TPM)是一种磺胺酸取代的单糖,因其对癫痫、神经性疼痛和偏头痛的广泛作用而闻名。然而,它对等离子体离子电流的精确影响,包括它们的大小和门控动力学,仍然不确定。因此,重新评估TPM对电兴奋细胞中离子电流的调节作用是必要的。方法:采用膜片钳技术,研究TPM对GH3乳养菌等离子体离子电流振幅、门控和迟滞的影响。结果:我们观察到TPM对短暂的去极化刺激激活的瞬时(INa(T))和晚期(INa(L)) INa组分具有浓度依赖性的抑制作用。低浓度时,TPM对INa(T)无明显影响;但能有效降低INa(L)振幅。TPM在不改变门控电荷的情况下引起了INa(T)稳态失活曲线中点的左移。重要的是,在TPM暴露期间,INa(T)的总体电流密度与电压关系保持不变。有趣的是,TPM诱导的INa(T)减少不能被随后添加氟马西尼或氯毒素逆转。此外,TPM抑制了超极化激活阳离子电流(Ih)的密度。同时,在TPM的作用下,Ih的激活时间过程减慢。此外,TPM暴露降低了双三角形斜坡电压激活的滞后强度,奥沙利铂部分逆转了这一变化。在电流箝位电位记录中,自发动作电位在TPM的存在下容易受到抑制。结论:总的来说,这些发现强烈表明TPM对INa和Ih的影响有可能影响可兴奋细胞的功能活动和电行为。
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引用次数: 0
In vivo acute oral toxicity assessment of novel histone deacetylase 2 inhibitor. 新型组蛋白去乙酰化酶2抑制剂的体内急性口服毒性评价。
IF 2.7 3区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2025-11-28 DOI: 10.1186/s40360-025-01040-9
Padmini Pai, Rachel Savio D'Mello, Shruthi Nayak, Pallavi Rao, Srinivas Oruganti, Kapaettu Satyamoorthy, Babitha Kampa Sundara

Histone deacetylases (HDACs) are enzymes responsible for removing acetyl groups from histone proteins, resulting in chromatin condensation and the repression of genes. They regulate the expression of genes, the cell cycle, and multiple cellular processes. Hydroxamic acid is a well-recognized moiety characterized by its potent zinc-binding ability, making it an effective inhibitor of HDACs. A novel hydroxamic acid-based molecule, N1-(2,2'-bipyridin-6-yl)-N8-hydroxyoctanediamide (compound 3B), was previously synthesized, and the anticancer properties of the compound were examined in vitro in our laboratory. No prior toxicological study has been performed on this compound. Therefore, the current investigation focused on the acute oral toxicity of compound 3B in female BALB/c mice, adhering to OECD 423 guidelines. In this study, compound 3B was given orally at 300 mg/kg body weight (b.w.) or 2000 mg/kg b.w. The food consumption and body weight of the mice did not differ significantly between the control and treated groups. Variations were observed in the levels of a few of the biochemical markers. Histopathological examination revealed inflammatory infiltration and lesions in a few vital organs. The comprehensive investigation revealed that compound 3B exhibited moderate toxic effects at a relatively high dosage of 2000 mg/kg in few organs and caused alterations in biochemical markers; however, it did not result in any mortality, indicating that the LD50 value exceeded 2000 mg/kg. Compound 3B can be administered at concentrations less than 2000 mg/kg for subsequent studies.

组蛋白去乙酰化酶(hdac)是负责从组蛋白中去除乙酰基的酶,导致染色质凝聚和基因抑制。它们调节基因的表达、细胞周期和多种细胞过程。羟肟酸是一个公认的片段,其特点是其强大的锌结合能力,使其成为hdac的有效抑制剂。先前合成了一种新的羟肟酸基分子,N1-(2,2'-联吡啶-6-基)- n8 -羟基辛烷二胺(化合物3B),并在我们的实验室对该化合物的抗癌特性进行了体外检测。之前没有对这种化合物进行毒理学研究。因此,目前的研究重点是化合物3B对雌性BALB/c小鼠的急性口服毒性,遵循OECD 423指南。本研究以300 mg/kg体重或2000 mg/kg体重的剂量口服化合物3B,对照组和处理组小鼠的食量和体重无显著差异。在一些生化标记物的水平上观察到变化。组织病理学检查显示炎性浸润及少数重要脏器病变。综合研究发现,化合物3B在较高剂量(2000 mg/kg)下对少数器官表现出中等毒性作用,并引起生化指标的改变;但未造成死亡,说明LD50值超过2000 mg/kg。化合物3B可以在低于2000 mg/kg的浓度下进行后续研究。
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引用次数: 0
Epidemiology of drug-related liver injury among the elderly: a systematic review and meta-analysis of incidence, and risk factors. 老年人药物相关性肝损伤的流行病学:发病率和危险因素的系统回顾和荟萃分析。
IF 2.7 3区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2025-11-28 DOI: 10.1186/s40360-025-01051-6
Yujing Fan, Junfu Zheng, Junnan Gu, Lei Li
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引用次数: 0
Exploring the impact of endocrine-disrupting chemicals on erectile dysfunction through network toxicology and machine learning. 通过网络毒理学和机器学习探索内分泌干扰化学物质对勃起功能障碍的影响。
IF 2.7 3区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2025-11-28 DOI: 10.1186/s40360-025-01033-8
Zhiyu Liu, Juan Wang, Yuqi Li, Yang Zeng, Qilong Wu, Xinyao Zhu, Tao Zhou, Qingfu Deng

Background: Erectile dysfunction (ED) is a common male sexual disorder with a multifactorial etiology. The exposure to endocrine-disrupting chemicals (EDCs) has been increasingly linked to reproductive health disorders in both men and women. EDCs can interfere with hormonal signaling and physiological homeostasis, but their specific roles and mechanisms in contributing to ED remain inadequately elucidated.

Methods: Network toxicology and enrichment analysis were used to identify potential targets and signaling pathways involved in ED induced by EDCs. Single-cell sequencing was conducted to analyze the expression profiles of these targets in corpus cavernosum tissue. Key regulatory molecules were identified through protein-protein interaction (PPI) network analysis. Core targets were selected using three machine learning algorithms to evaluate the association between EDCs and ED. Molecular docking simulations were further employed to verify the binding affinity between EDCs and target proteins, elucidating potential mechanisms of action.

Results: A total of 186 potential targets were identified. Single-cell sequencing revealed their expression characteristics. PPI analysis identified key regulatory molecules, and machine learning approaches pinpointed two core targets: CTNNB1 and HIF1A. Molecular docking confirmed that most EDCs exhibit stable binding to CTNNB1 and HIF1A, suggesting the involvement of associated signaling pathways in the development of ED.

Conclusions: This study systematically characterizes the molecular pathways through which EDCs contribute to ED, with CTNNB1 and HIF1A emerging as central players. The identification of these core targets provides a theoretical foundation for developing targeted interventions against environment-related ED and underscores the importance of mitigating EDC exposure in public health strategies.

背景:勃起功能障碍(ED)是一种常见的男性性功能障碍,具有多因素的病因。暴露于干扰内分泌的化学物质(EDCs)已越来越多地与男性和女性的生殖健康障碍联系在一起。EDCs可以干扰激素信号和生理稳态,但其在促进ED中的具体作用和机制尚未充分阐明。方法:通过网络毒理学和富集分析,确定EDCs诱导ED的潜在靶点和信号通路。通过单细胞测序分析这些靶点在海绵体组织中的表达谱。通过蛋白相互作用(PPI)网络分析确定了关键调控分子。利用三种机器学习算法选择核心靶点,评估EDCs与ED之间的关联。通过分子对接模拟进一步验证EDCs与靶蛋白之间的结合亲和力,阐明潜在的作用机制。结果:共鉴定出186个潜在靶点。单细胞测序揭示了它们的表达特征。PPI分析确定了关键的调控分子,机器学习方法确定了两个核心靶点:CTNNB1和HIF1A。分子对接证实,大多数EDCs与CTNNB1和HIF1A表现出稳定的结合,表明相关信号通路参与ED的发展。结论:本研究系统地表征了EDCs促进ED的分子途径,其中CTNNB1和HIF1A是核心参与者。这些核心目标的确定为制定针对环境相关ED的有针对性干预措施提供了理论基础,并强调了在公共卫生战略中减少EDC暴露的重要性。
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引用次数: 0
Preparation and characterization of Lactobacillus rhamnosus, Lactobacillus casei, glycyrrhizin, vitamin-D3, and citric acid-loaded mucoadhesive pectin microparticles for the management of dental caries. 鼠李糖乳杆菌、干酪乳杆菌、甘草酸、维生素d3和柠檬酸负载的粘接果胶微粒的制备和特性研究。
IF 2.7 3区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2025-11-27 DOI: 10.1186/s40360-025-01010-1
Sumita Mishra, Somnath Ghosh, Koushik Jana, Biplab Debnath, Sudhanshu Ranjan Rout, Vineet Kumar Rai, Rakesh Kumar Sahoo, Jitu Halder, Ritu Mahanty, Priyanka Dash, Chandan Das, Salim Manoharadas, Jameel Al-Tamimi, Muralidhar Tata, Neeta Mohanty, Biswakanth Kar, Goutam Ghosh, Goutam Rath
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引用次数: 0
The effect of acetyl tributyl citrate on coronary heart disease: a comprehensive computational analysis. 柠檬酸乙酰三丁酯对冠心病的影响:综合计算分析。
IF 2.7 3区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2025-11-26 DOI: 10.1186/s40360-025-01023-w
Xu Ma, Yingying Liu, Zhen Hua, Feng Jiang, Shuxia Shi, Kaile Wang, Jie Yu, Lei Zhang
<p><strong>Background: </strong>Recent research suggests a link between acetyl tributyl citrate (ATBC) exposure and an increased risk of coronary heart disease (CHD).</p><p><strong>Objective: </strong>This study investigated the molecular mechanisms underlying ATBC's potential role in CHD pathogenesis.</p><p><strong>Methods: </strong>Using "Acetyl tributyl citrate" as a search term, relevant targets were retrieved from the ChEMBL database. The standard simplified molecular input line entry system (SMILES) notation of ATBC was submitted to the SwissTargetPrediction database. All the targets obtained were compiled to create a target database for ATBC. Functional enrichment analysis and gene set enrichment analysis (GSEA) were performed to explore the potential pathogenic mechanisms of ATBC. The GSE66360 dataset was used as the training dataset, while GSE48060 and GSE60993 served as validation datasets. A total of 107 combinations of eleven machine learning algorithms, including Random Forest (RF), Elastic Net (Enet), support vector machine (SVM), least absolute shrinkage and selection operator (LASSO) regression, Ridge regression, gradient boosting with component-wise linear model (glmBoost), partial least squares regression for generalized linear model (plsRglm), linear discriminant analysis (LDA), extreme gradient boosting (XGBoost), Naive Bayes, and stepwise generalized linear model (Stepglm), were applied to identify the model with the highest area under the curve (AUC) as the best diagnostic model. Additionally, receiver operating characteristic (ROC) curves were used to identify key hub genes. Single-cell transcriptomic data were employed to locate these hub genes, while molecular docking further validated the binding capacity between ATBC and its hub targets. This included converting the ligand to 3D format, performing molecular docking, and calculating the binding affinity and hydrogen bond formation between the molecules. The binding site with the lowest predicted binding affinity was selected for visualization.</p><p><strong>Result: </strong>By integrating ATBC targets with CHD core modules, we identified genes associated with ATBC-induced CHD. Using the RF algorithm, we constructed the optimal diagnostic model and identified key hub genes, including MMP9, NLRP3, and PLAU. These genes were closely associated with glucose and lipid metabolism disorders, induction of estrogen resistance, and vascular inflammation. Furthermore, NLRP3 was predominantly expressed in monocytes, while PLAU showed higher expression in fibroblasts and endothelial cells. The molecular docking results indicated that the calculated predicted binding affinities were all less than or equal to -5.0 kcal/mol. This confirmed the binding affinities of ATBC with MMP9 and PLAU, and supported their involvement in the pathogenesis of coronary heart disease.</p><p><strong>Conclusion: </strong>Our study predicted ATBC's potential mechanisms in CHD progression and identified key
背景:最近的研究表明,乙酰柠檬酸三丁酯(ATBC)暴露与冠心病(CHD)风险增加之间存在联系。目的:探讨ATBC在冠心病发病中的潜在分子机制。方法:以“乙酰柠檬酸三丁酯”为检索词,从ChEMBL数据库中检索相关靶点。将ATBC的标准简化分子输入行输入系统(SMILES)表示法提交到SwissTargetPrediction数据库。将获得的所有目标进行编译,以创建ATBC的目标数据库。通过功能富集分析和基因集富集分析(GSEA)探讨ATBC的潜在致病机制。使用GSE66360数据集作为训练数据集,GSE48060和GSE60993作为验证数据集。包括随机森林(RF)、弹性网络(Enet)、支持向量机(SVM)、最小绝对收缩和选择算子(LASSO)回归、Ridge回归、梯度增强与组件线性模型(glmBoost)、广义线性模型的偏最小二乘回归(plsRglm)、线性判别分析(LDA)、极端梯度增强(XGBoost)、朴素贝叶斯、采用逐步广义线性模型(Stepglm),确定曲线下面积(AUC)最大的模型为最佳诊断模型。此外,采用受试者工作特征(ROC)曲线鉴定关键枢纽基因。利用单细胞转录组学数据定位这些枢纽基因,而分子对接进一步验证了ATBC与其枢纽靶点之间的结合能力。这包括将配体转换为3D格式,进行分子对接,并计算分子之间的结合亲和力和氢键形成。选择预测结合亲和力最低的结合位点进行可视化。结果:通过将ATBC靶点与冠心病核心模块整合,我们确定了ATBC诱导冠心病的相关基因。利用RF算法构建了最优诊断模型,并鉴定出MMP9、NLRP3和PLAU等关键枢纽基因。这些基因与糖脂代谢紊乱、雌激素抵抗诱导和血管炎症密切相关。此外,NLRP3主要在单核细胞中表达,而PLAU在成纤维细胞和内皮细胞中表达较高。分子对接结果表明,计算得到的预测结合亲和力均小于或等于-5.0 kcal/mol。这证实了ATBC与MMP9和PLAU的结合亲和性,并支持它们参与冠心病的发病机制。结论:我们的研究预测了ATBC在冠心病进展中的潜在机制,并确定了关键的中枢基因,特别是MMP9、NLRP3和PLAU。这些发现为未来的研究提供了新的分子靶点,并强调了ATBC在日常应用中的潜在健康风险。
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引用次数: 0
Preconditioning with hydrogen gas produces cardioprotective effects through autophagy activation in rat cardiomyocytes. 氢气预处理通过自噬激活大鼠心肌细胞产生心脏保护作用。
IF 2.7 3区 医学 Q2 PHARMACOLOGY & PHARMACY Pub Date : 2025-11-26 DOI: 10.1186/s40360-025-01032-9
Tokuhiro Yamada, Aya Kimura, Takashi Juri, Koichi Suehiro, Takashi Mori
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引用次数: 0
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BMC Pharmacology & Toxicology
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