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Genome editing pig models with elements for controllable gene expression 具有可控基因表达元件的基因组编辑猪模型
Pub Date : 2023-08-24 DOI: 10.1002/aro2.20
Qin Jin, Hui Shi, Xiaoyi Liu, Jialu Ju, Kepin Wang, Liangxue Lai

Conditional gene regulation systems can control gene expression in predefined tissues or organs at a desired time. Site-specific recombinase systems and chemically induced gene expression systems are the two most widely used approaches for creating genetically modified (GM) animals with conditional regulation of gene expression. Generation of GM pigs with controllable elements, usually involving multiple gene editing, used to be a major challenge due to a lack of germ line-competent pluripotent stem cells. With the emergence of artificial endonuclease-mediated gene editors, a variety of GM pigs with recombinase-specific recognition elements or chemically induced elements for conditional regulation of gene expression have been generated by the combination of site-directed knock-in of somatic cells and somatic cell nuclear transfer technology, allowing conditional deletion of endogenous genes or overexpression of exogenous genes in pigs. These inducible tool pig models will greatly facilitate the production of GM pigs and broaden the applications of transgenic pigs in biomedicine and agriculture fields. In this paper, we review the progress in the construction and application of pigs with controllable elements using gene editing techniques.

条件基因调控系统可以控制基因在预定组织或器官中的表达。位点特异性重组酶系统和化学诱导基因表达系统是两种最广泛使用的方法,用于创造基因表达有条件调节的转基因动物。由于缺乏生殖系能多能干细胞,具有可控元素的转基因猪的产生(通常涉及多个基因编辑)过去是一个主要挑战。随着人工核酸内切酶介导的基因编辑器的出现,通过结合体细胞的定点敲入和体细胞核转移技术,已经产生了多种具有重组酶特异性识别元件或化学诱导元件的基因表达条件调控的转基因猪,允许猪有条件地删除内源基因或过表达外源基因。这些诱导工具猪模型将极大地促进转基因猪的生产,拓宽转基因猪在生物医药和农业领域的应用。本文就利用基因编辑技术构建具有可控元件的猪及其应用进展进行综述。
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引用次数: 0
Deer antler reserve mesenchyme cells with hyaluronan alleviates cartilage damage in a rat model 加入透明质酸的鹿角储备间充质细胞可减轻大鼠软骨损伤
Pub Date : 2023-08-24 DOI: 10.1002/aro2.18
Boyin Jia, Xin Li, Xintong Han, Fuquan Ma, Linlin Zhang, Xue Wang, Xinrui Yan, Yu Zhang, Jianming Li, Pengfei Hu, Yusu Wang, Naichao Diao, Kun Shi, Ying Zong, Rui Du, Chunyi Li

Reserve mesenchyme cells (RMCs) of deer antlers have been considered as the promising cell source for repairing injury-induced articular cartilage or cartilage degeneration. However, systematic investigation of RMC differentiation to repair injured cartilage and its combination with biomaterials has not been reported. The aim of this study was to evaluate the role of RMCs in combination with hyaluronic acid (HA) in promoting chondrogenic differentiation through simulating native environments and their efficacy in articular cartilage repair. The RMCs were cultured in vitro for the characterization of these cells, including morphology, surface marker expression, and multipotent differentiation potential (adipogenesis, chondrogenesis, and osteogenesis). When combined with HA in vitro, RMCs increased expression levels of the chondrogenic marker gene (COL II and COMP) but decreased levels of the hypertrophic marker gene (COL X). Using a rat articular cartilage defect model, we evaluated the effects of RMCs in combination with HA on cartilage defect repair at 4 and 8 weeks through macroscopical, histological, and immunohistochemical examinations. Compared with other groups, treatment with RMCs + HA reduced cartilage loss and degree of cartilage surface worn, whereas cartilage content was significantly increased. These results suggest that the combination of RMCs with HA can effectively repair cartilage defects. We believe that effective cartilage defect repair will benefit from the use of RMCs together with favorable biomaterials, such as HA.

鹿角的储备间充质细胞(RMCs)被认为是修复损伤诱导的关节软骨或软骨变性的有希望的细胞来源。然而,RMC分化修复损伤软骨及其与生物材料结合的系统研究尚未见报道。本研究的目的是通过模拟自然环境来评估RMCs与透明质酸(HA)联合促进软骨分化的作用及其在关节软骨修复中的功效。我们在体外培养RMCs,对这些细胞进行表征,包括形态学、表面标记物表达和多能分化潜能(脂肪生成、软骨形成和成骨)。在体外与HA联合使用时,RMCs增加了软骨生成标记基因(COL II和COMP)的表达水平,但降低了增生性标记基因(COL X)的表达水平。通过大鼠关节软骨缺损模型,我们通过宏观、组织学和免疫组织化学检查,评估了RMCs与HA联合使用在第4周和第8周时对软骨缺损修复的影响。与其他组相比,RMCs + HA治疗可减少软骨损失和软骨表面磨损程度,软骨含量显著增加。这些结果表明RMCs与HA结合可以有效修复软骨缺损。我们相信有效的软骨缺损修复将受益于rmc和有利的生物材料,如透明质酸。
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引用次数: 0
Links between industrial livestock production, disease including zoonoses and antimicrobial resistance 工业化畜牧生产、包括人畜共患疾病和抗微生物耐药性之间的联系
Pub Date : 2023-08-19 DOI: 10.1002/aro2.19
Peter Stevenson

A range of studies indicates that keeping farm animals in crowded, stressful conditions leads to an increased risk of the emergence, transmission, and amplification of pathogens including zoonoses. Some such zoonoses could lead to a pandemic. Biosecurity, though essential, is not on its own sufficient to prevent the entry of disease into large, intensive livestock housing. To minimize disease risks, both biosecurity measures and the keeping of animals in conditions that are supportive of good health and effective immunocompetence are necessary. A further threat to human health arises from the routine use of antimicrobials in intensive livestock production to prevent disease. This high use of antimicrobials contributes significantly to the emergence of antimicrobial resistance in animals, which can then be transferred to people, thereby undermining the efficacy of the antimicrobials that are so important in human medicine. If we want to save our antimicrobials and minimize the risk of future zoonoses and pandemics, we need to move to “health-oriented systems” for the rearing of animals, systems in which good health is inherent in the farming methods rather than being dependent on the routine use of antimicrobials. Health-oriented systems should avoid high stocking densities and large group size, should minimize stress and mixing of animals, and ensure that animals can perform their natural behaviors as the inability to do so is highly stressful. They should avoid the use of animals selected for excessive production levels as these appear to involve an increased risk of immunological problems and pathologies.

一系列研究表明,将农场动物饲养在拥挤、紧张的环境中会增加包括人畜共患病在内的病原体出现、传播和扩增的风险。一些这样的人畜共患疾病可能导致一场大流行病。生物安全虽然至关重要,但其本身并不足以防止疾病进入大型密集型牲畜饲养场。为了最大限度地降低疾病风险,生物安全措施和将动物饲养在有助于良好健康和有效免疫能力的条件下都是必要的。对人类健康的进一步威胁来自于在集约化畜牧生产中常规使用抗菌药物来预防疾病。抗微生物药物的大量使用大大导致了动物抗微生物耐药性的出现,这种耐药性可以转移到人身上,从而削弱了在人类医学中非常重要的抗微生物药物。如果我们想保存我们的抗菌药物,并将未来人畜共患疾病和流行病的风险降至最低,我们就需要转向“以健康为导向的动物饲养系统”,在这种系统中,良好的健康是农业方法固有的,而不是依赖于抗菌药物的常规使用。以健康为导向的系统应避免高饲养密度和大型群体,应最大限度地减少动物的压力和混合,并确保动物能够进行其自然行为,因为无法这样做是非常有压力的。他们应该避免使用因生产水平过高而选择的动物,因为这些动物似乎会增加免疫问题和病理的风险。
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引用次数: 1
Research progress on animal environment and welfare 动物环境与福利研究进展
Pub Date : 2023-08-17 DOI: 10.1002/aro2.16
Baoming Li, Yang Wang, Li Rong, Weichao Zheng

Animal welfare closely depends on its ability to adapt and thrive in a harmonious relationship with its environment, ensuring both physical and psychological well-being. Over the years, the welfare of farm animals has gathered global attention and has become increasingly important to the general public and scientific communities. The connection between the environment and animal welfare is primarily established through the provision of suitable and controllable environment for animals. However, it is essential to recognize that the impact of environment extends beyond merely ensuring freedom from discomfort. The environment plays a crucial role in shaping an animal's response to challenges such as disease, stress, and pathogen. While animals may be housed in controlled environments that provide optimal conditions for health, production, and welfare, it is important to acknowledge that specific scenarios can significantly affect and alter the environmental requirements. Even with access to fresh air, certain factors can have a substantial impact on the well-being of animals. Furthermore, providing appropriate environmental conditions goes beyond meeting basic needs and can greatly contribute to allowing animals to engage in their natural behaviors. It serves as a relevant tool for ensuring and maintaining adequate welfare standards. This review takes a comprehensive approach to environmental welfare by considering the welfare of animals managed in different stocking systems, considering environmental stress, stocking systems, and the provision of environmental enrichment items. By examining these factors, a broader understanding of the relationship between environment and welfare is achieved and recommendations for future research are outlined.

动物的福利在很大程度上取决于它在与环境和谐相处中适应和茁壮成长的能力,确保身体和心理健康。多年来,农场动物的福利引起了全球的关注,对公众和科学界来说越来越重要。环境和动物福利之间的联系主要是通过为动物提供合适和可控的环境来建立的。然而,必须认识到,环境的影响不仅仅是确保免于不适。环境在塑造动物对疾病、压力和病原体等挑战的反应方面发挥着至关重要的作用。虽然动物可能被安置在为健康、生产和福利提供最佳条件的受控环境中,但重要的是要认识到,特定的情况会显著影响和改变环境要求。即使有了新鲜空气,某些因素也会对动物的健康产生重大影响。此外,提供适当的环境条件不仅能满足基本需求,还能极大地促进动物的自然行为。它是确保和维持适当福利标准的相关工具。本综述通过考虑不同饲养系统中管理的动物的福利,考虑环境压力、饲养系统和环境富集项目的提供,对环境福利采取了全面的方法。通过研究这些因素,可以更广泛地理解环境和福利之间的关系,并概述了未来研究的建议。
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引用次数: 0
Safety and quality evaluations of liquid milk and infant formula products in China in 2022 2022年中国液态奶及婴幼儿配方奶粉产品安全质量评价
Pub Date : 2023-08-11 DOI: 10.1002/aro2.11
Lu Meng, Nan Zheng, Yanan Gao, Huimin Liu, Jiaqi Wang

Milk serves two nutritional functions: it provides nutrition while also maintaining a healthy intestinal microenvironment. Thus, the safety and quality of milk products are critical for consumers' health. To evaluate liquid milk and infant formula products in China, we analyzed nine indices of 294 batches of pasteurized milk (PM), 92 batches of ultra-high temperature milk (UHT), and 20 batches of infant formula milk powder (IF) collected from 21 provinces in 2022. All PM, UHT, and IF samples were satisfactory concerning aflatoxin M1 contamination, contamination by heavy metals, and residues of veterinary drugs and pesticides. The contents of lactoferrin, α-lactalbumin, β-lactoglobulin, furosine, and lactulose in the majority of samples met the group standards. Moreover, the contents of lactoferrin, α-lactalbumin, and β-lactoglobulin were higher in PM than in UHT, while furosine and lactulose contents showed the opposite trend. The findings concerning the safety and quality of milk products in China provide important insights to aid consumer preferences for milk products.

牛奶有两种营养功能:它提供营养,同时保持健康的肠道微环境。因此,奶制品的安全和质量对消费者的健康至关重要。为了评估中国的液态奶和婴儿配方奶粉产品,我们分析了2022年从21个省份收集的294批次巴氏灭菌奶(PM)、92批次超高温奶(UHT)和20批次婴儿配方奶粉(IF)的9项指标。所有PM、UHT和IF样品在黄曲霉毒素M1污染、重金属污染以及兽药和农药残留方面均令人满意。大多数样品中乳铁蛋白、α-乳清蛋白、β-乳球蛋白、糠氨酸和乳果糖的含量符合组标准。此外,PM中乳铁蛋白、α-乳清蛋白和β-乳球蛋白的含量高于UHT,而糠氨酸和乳果糖的含量则呈现相反的趋势。有关中国乳制品安全和质量的研究结果为帮助消费者偏好乳制品提供了重要见解。
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引用次数: 0
Multi-trait genomic predictions using GBLUP and Bayesian mixture prior model in beef cattle 基于GBLUP和贝叶斯混合先验模型的肉牛多性状基因组预测
Pub Date : 2023-08-06 DOI: 10.1002/aro2.13
Zezhao Wang, Haoran Ma, Hongwei Li, Lei Xu, Hongyan Li, Bo Zhu, El Hamidi Hay, Lingyang Xu, Junya Li

Multiple trait genomic selection incorporating correlated traits can improve the predictive ability of low-heritability traits. In this study, we evaluated genomic prediction accuracy using multi-trait BayesCπ method (MT-BayesCπ), which allows for a broader range of mixture priors for important traits in beef cattle. We compared the prediction performance of MT-BayesCπ with single-trait genomic best linear unbiased prediction (ST-GBLUP), multi-trait GBLUP (MT-GBLUP), and single-trait BayeCπ (ST-BayesCπ) methods. We found that ribeye area (REA) and ribeye weight (REWT) showed high heritability, while slaughter weight (SWT) and carcass weight (CWT) displayed medium heritability, and slaughter rate (SR) and feedlot average daily gain (FDG) showed low heritability. Highly positive genetic correlations were observed between CWT and SWT (0.981) and SR and REWT (0.921). Notably, the MT-BayesCπ method showed superior predictive abilities compared to other models. Using MT-BayesCπ method, the accuracy increased from 0.272 to 0.694 for CWT compared to ST-GBLUP and ST-BayesCπ. MT-GBLUP and ST-BayesCπ showed similar prediction accuracies, while MT-BayesCπ showed the least biased evaluations. Additionally, our results suggested that prediction accuracy of low-heritability traits significantly increased when they were combined with traits with high genetic correlation in a multi-trait prediction. Our study suggests that multi-trait genomic predictions using GBLUP and Bayesian mixture prior models is feasible for genomic selection in beef cattle. Our findings indicate that MT-BayesCπ outperforms other models (ST-GBLUP, MT-GBLUP and ST-BayesCπ), especially for low-heritability traits.

结合相关性状的多性状基因组选择可以提高低遗传力性状的预测能力。在这项研究中,我们使用多性状贝叶斯Cπ方法(MT贝叶斯Cπ)评估了基因组预测的准确性,该方法为肉牛的重要性状提供了更广泛的混合先验。我们比较了MT贝叶斯Cπ与单特征基因组最佳线性无偏预测(ST-GBLUP)、多特征GBLUP(MT-GBLUP)和单特征贝叶斯Cπ(ST贝叶斯Cπ)方法的预测性能。结果表明,肋叶面积(REA)和肋叶重(REWT)具有较高的遗传力,屠宰重(SWT)和胴体重(CWT)具有中等遗传力,而屠宰率(SR)和饲养场平均日增重(FDG)具有较低的遗传力。CWT和SWT(0.981)以及SR和REWT(0.921)之间存在高度正相关。值得注意的是,与其他模型相比,MT-BayesCπ方法显示出优越的预测能力。与ST-GBLUP和ST-BayesCπ相比,使用MT-BayesCπ方法,CWT的精度从0.272提高到0.694。MT-GBLUP和ST-BayesCπ显示出相似的预测精度,而MT-BayesCπ显示出最小的偏差评估。此外,我们的研究结果表明,在多性状预测中,当低遗传力性状与高遗传相关性的性状相结合时,其预测精度显著提高。我们的研究表明,使用GBLUP和贝叶斯混合先验模型进行多性状基因组预测对于肉牛的基因组选择是可行的。我们的研究结果表明,MT贝叶斯Cπ优于其他模型(ST-GBLUP、MT-GBLUP和ST贝叶斯Cπ),尤其是在低遗传力性状方面。
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引用次数: 0
Zinc methionine improves the lipid metabolism that is associated with the alteration of intestine mucosal proteomes and microbiota of newborn Holstein dairy calves 蛋氨酸锌可改善与新生荷斯坦奶牛肠粘膜蛋白质组和微生物群改变有关的脂质代谢
Pub Date : 2023-08-02 DOI: 10.1002/aro2.10
Xin Yu, Yeqianli Wo, Fengtao Ma, Qiang Shan, Jingya Wei, Peng Sun

Supplementation of diets with a modest amount of zinc methionine (ZM) has been documented to improve the growth performance and antioxidant function of dairy calves, but the underlying mechanisms remain elusive. In the present study, 16 dairy calves were allocated to a control (CON) group (calves consumed a basal diet) and a ZM group (calves ingested the basal diet and had an additional 455 mg ZM/day, corresponding to 80 mg zinc/day). The calves were fed these diets for 2 weeks, after which their serum antioxidant parameters, lipids, and jejunal mucosal proteome and microbiota were analyzed. The ZM group had lower levels of total cholesterol, triglycerides, and malondialdehyde but higher high-density lipoprotein cholesterol and glutathione peroxidase activity in the serum. A total of 142 differentially expressed proteins in the intestinal mucosa between the CON and ZM groups had been identified (ZM upregulated 117 proteins and downregulated 25 proteins). In addition, the protein expression of acyl-coenzyme A oxidase 1, fatty acid binding protein 2, and peroxisome proliferator-activated receptor gamma was higher in the ZM group. 16S rRNA gene sequencing indicated beneficial microbes, such as Veillonellaceae, Akkermansia_muciniphila, and Bifidobacterium adolescentis, which were more abundant, whereas Acinetobacter lwoffii was less abundant in calf jejunal mucosa in the ZM group. Finally, the propionate, butyrate, and iso-valerate concentrations in the jejunal digesta were greater in the ZM group than those in the CON group. Collectively, the present study shows that ZM supplementation improves the serum and intestine mucosal lipid metabolism associated with the alterations in mucosal fatty acids β-oxidation and microbiota.

有资料表明,在日粮中补充适量的蛋氨酸锌(ZM)可提高乳牛的生长性能和抗氧化功能,但其潜在机制仍难以确定。在本研究中,16 头乳牛被分配到对照(CON)组(犊牛食用基础日粮)和 ZM 组(犊牛食用基础日粮并每天额外摄入 455 毫克 ZM,相当于每天摄入 80 毫克锌)。犊牛食用这些日粮两周后,对其血清抗氧化剂参数、血脂、空肠粘膜蛋白质组和微生物群进行了分析。ZM组的总胆固醇、甘油三酯和丙二醛水平较低,但血清中的高密度脂蛋白胆固醇和谷胱甘肽过氧化物酶活性较高。在 CON 组和 ZM 组的肠粘膜中,共发现了 142 种表达不同的蛋白质(ZM 上调了 117 种蛋白质,下调了 25 种蛋白质)。此外,ZM 组中酰基辅酶 A 氧化酶 1、脂肪酸结合蛋白 2 和过氧化物酶体增殖激活受体 gamma 的蛋白表达量更高。16S rRNA 基因测序表明,ZM 组小牛空肠黏膜中的有益微生物较多,如 Veillonellaceae、Akkermansia_muciniphila 和青春期双歧杆菌,而 Lwoffii 阴沟杆菌较少。最后,ZM 组空肠消化液中丙酸盐、丁酸盐和异戊酸盐的浓度高于 CON 组。总之,本研究表明,补充 ZM 可改善血清和肠道粘膜脂质代谢,这与粘膜脂肪酸 β 氧化和微生物群的改变有关。
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引用次数: 0
Effect of the zinc transporter ZupT on the virulence mechanisms of mesophilic Aeromonas salmonicida SRW-OG1 锌转运蛋白ZupT对嗜温性沙门氏气单胞菌SRW-OG1毒力机制的影响
Pub Date : 2023-08-01 DOI: 10.1002/aro2.17
Jiajia Wang, Qiu Li, Lixing Huang

As a typical psychrophilic bacterial pathogen, Aeromonas salmonicida causes furunculosis in wild and farmed freshwater and marine fish, leading to substantial economic losses in the global aquaculture industry. Previous studies have shown that A. salmonicida is unable to grow above 25°C, hence limiting its infection to cold-water fish. However, we isolated A. salmonicida SRW-OG1, a mesophilic pathogenic strain from the warm-water fish Epinephelus coioides. Through RNA-seq analysis, we observe significant upregulation of the zupT gene at 28°C. ZupT is a member of zinc-regulated transporters and iron-regulated transporter-like proteins (ZIP family) and is closely associated with transcriptional regulation of virulence in certain pathogens. Consequently, our study aimed to examine the role of zupT during A. salmonicida SRW-OG1 infection at high temperatures. Our findings demonstrate that the zupT-RNAi strain exhibits severe growth restriction under limited Zn2+ and Fe2+ conditions. Notably, this strain shows significantly reduced mortality rates and colonization abilities. Moreover, its motility, biofilm formation, adhesion, and hemolytic activities are significantly diminished. Confocal laser scanning microscopy reveals earlier and accelerated biofilm dissociation in the zupT-RNAi strain. Analysis of extracellular products at 36 h indicates a considerable reduction in relative extracellular protein content in the zupT-RNAi strain. Taken together, our results highlight the vital role of the zupT gene in zinc transport and the fitness of A. salmonicida SRW-OG1 within the host.

作为一种典型的嗜冷细菌病原体,沙门氏气单胞菌在野生和养殖淡水和海洋鱼类中引起毛茛病,给全球水产养殖业带来巨大的经济损失。先前的研究表明,沙门氏菌不能在25°C以上生长,因此将其感染限制在冷水鱼身上。然而,我们从温水鱼中分离到了嗜中温致病菌株A.salmonicida SRW-OG1。通过RNA-seq分析,我们观察到zupT基因在28°C时显著上调。ZupT是锌调节转运蛋白和铁调节转运蛋白样蛋白(ZIP家族)的成员,与某些病原体毒力的转录调控密切相关。因此,我们的研究旨在检验zupT在高温下沙门氏菌SRW-OG1感染过程中的作用。我们的研究结果表明,zupT RNAi菌株在有限的Zn2+和Fe2+条件下表现出严重的生长限制。值得注意的是,该菌株显示出显著降低的死亡率和定植能力。此外,其运动性、生物膜形成、粘附性和溶血活性显著降低。共聚焦激光扫描显微镜揭示了zupT RNAi菌株中较早且加速的生物膜解离。在36小时时对细胞外产物的分析表明zupT RNAi菌株中相对细胞外蛋白含量显著降低。总之,我们的研究结果强调了zupT基因在锌转运和A.salmonicida SRW-OG1在宿主内的适应性中的重要作用。
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引用次数: 0
SEMA4G targeted by miR-363-5p regulates the proliferation of granulosa cells in Yunshang black goats miR-363-5p靶向的SEMA4G调控云山黑山羊颗粒细胞的增殖
Pub Date : 2023-08-01 DOI: 10.1002/aro2.15
Yulin Chen, Peng Wang, Xiaoyun He, Yufang Liu, Mingxing Chu

Proliferation of granular cells (GCs) plays an important role in ovary development, providing energy and a microenvironment for oocyte ovulation. In this study, we explored the spatiotemporal expression of SEMA4G and its effects on the growth and development of goat GCs using primary GCs cultured in vitro as a model. The results showed that the expression level of SEMA4G was significantly higher in the ovaries of high-fertility goats than in those of low-fertility goats (p < 0.05). The mRNA and protein expression levels of the cell proliferation markers of GCs were significantly increased after the overexpression of SEMA4G in goat primary GCs. The EdU and CCK8 results showed that cell viability was elevated in goat GCs and that proliferation was promoted by an increase in the number of proliferating cells. The proliferation of goat GCs was significantly inhibited by SEMA4G inhibition (p < 0.05). The results of online miRNA and target gene prediction software and dual luciferase activity analysis confirmed that SEMA4G could bind to mi-363-5p and was one of its target genes. The RT‒qPCR results showed that the expression level of miR-363-5p was significantly lower in the ovaries of high-fertility goats than in those of low-fertility goats in contrast to the expression level of SEMA4G (p < 0.05). After the overexpression of miR-363-5p in goat GCs, the expression of SEMA4G was significantly suppressed (p < 0.05). Collectively, the results of this study could lay the foundation for exploring the molecular mechanisms by which SEMA4G and miR-363-5p regulate the growth and development of goat GCs and provide targets for breeding high-fertility goats.

颗粒细胞(GCs)的增殖在卵巢发育中起着重要作用,它为卵母细胞排卵提供能量和微环境。本研究以体外培养的原代GCs为模型,探讨了SEMA4G的时空表达及其对山羊GCs生长发育的影响。结果表明,SEMA4G在高繁殖力山羊卵巢中的表达水平明显高于低繁殖力山羊(p <0.05)。在山羊原代GCs中过表达SEMA4G后,GCs细胞增殖标志物的mRNA和蛋白表达水平明显升高。EdU和CCK8结果表明,山羊GCs细胞活力提高,增殖细胞数量增加,促进了细胞增殖。抑制 SEMA4G 能显著抑制山羊 GCs 的增殖(p < 0.05)。在线 miRNA 和靶基因预测软件及双荧光素酶活性分析结果证实,SEMA4G 可与 mi-363-5p 结合,是其靶基因之一。RT-qPCR结果显示,高繁殖力山羊卵巢中miR-363-5p的表达水平明显低于低繁殖力山羊卵巢中SEMA4G的表达水平(p <0.05)。在山羊GC中过表达miR-363-5p后,SEMA4G的表达被显著抑制(p <0.05)。总之,本研究的结果可为探索SEMA4G和miR-363-5p调控山羊GCs生长发育的分子机制奠定基础,并为培育高繁殖力山羊提供靶标。
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引用次数: 0
Research progress and applications of genome-wide association study in farm animals 农场动物全基因组关联研究进展及应用
Pub Date : 2023-08-01 DOI: 10.1002/aro2.14
Xiaodong Tan, Zhengxiao He, Alan G. Fahey, Guiping Zhao, Ranran Liu, Jie Wen

Exploring the genetic loci underlying economic traits is foundational for innovation in modern animal breeding technology. Genome-wide association studies (GWAS) have been valid and commonly used tools to dissect the genomic variants associated with phenotypes for the past ∼20 years and have contributed to our understanding of genetic and molecular bases of various traits. Here, we comprehensively review the recent research progress on GWAS methods. We highlight the methodological advancements enabled by the combination of new proteome, transcriptome, epigenome, and metagenome information and multi-omics analysis algorithms. The advances in GWAS investigations of chickens, pigs, cattle, and other animals during the last 5 years are also described. Finally, we discuss the current applications of GWAS in cutting-edge breeding technologies and overall future perspectives of the post-GWAS era.

探索经济性状的遗传位点是现代动物育种技术创新的基础。在过去的~20年里,全基因组关联研究(GWAS)一直是剖析与表型相关的基因组变异的有效和常用工具,并有助于我们理解各种性状的遗传和分子基础。在此,我们全面回顾了GWAS方法的最新研究进展。我们强调了新的蛋白质组、转录组、表观基因组和宏基因组信息以及多组学分析算法的结合所带来的方法学进步。还介绍了过去5年来GWAS对鸡、猪、牛和其他动物的研究进展。最后,我们讨论了GWAS在尖端育种技术中的当前应用以及后GWAS时代的总体未来前景。
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Animal Research and One Health
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