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Plant Pattern recognition receptors: Exploring their evolution, diversification, and spatiotemporal regulation 植物模式识别受体:探索它们的进化、多样化和时空调控
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-19 DOI: 10.1016/j.pbi.2024.102631
Tianrun Li , Alba Moreno-Pérez , Gitta Coaker

Plant genomes possess hundreds of candidate surface localized receptors capable of recognizing microbial components or modified-self molecules. Surface-localized pattern recognition receptors (PRRs) can recognize proteins, peptides, or structural microbial components as nonself, triggering complex signaling pathways leading to defense. PRRs possess diverse extracellular domains capable of recognizing epitopes, lipids, glycans and polysaccharides. Recent work highlights advances in our understanding of the diversity and evolution of PRRs recognizing pathogen components. We also discuss PRR functional diversification, pathogen strategies to evade detection, and the role of tissue and age-related resistance for effective plant defense.

植物基因组拥有数百种候选的表面定位受体,能够识别微生物成分或修饰后的自身分子。表面定位模式识别受体(PRRs)可将蛋白质、肽或微生物结构成分识别为非自我,从而触发复杂的信号通路,导致防御。PRRs 具有多种胞外结构域,能够识别表位、脂质、糖类和多糖。最近的工作重点介绍了我们对识别病原体成分的 PRRs 多样性和进化的理解所取得的进展。我们还讨论了 PRR 的功能多样化、病原体逃避检测的策略以及组织和年龄相关抗性对植物有效防御的作用。
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引用次数: 0
Novel structural insights at the extracellular plant-pathogen interface 细胞外植物-病原体界面的新结构见解
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-18 DOI: 10.1016/j.pbi.2024.102629
Brian Críostóir Mooney, Renier A.L. van der Hoorn

Plant pathogens represent a critical threat to global agriculture and food security, particularly under the pressures of climate change and reduced agrochemical use. Most plant pathogens initially colonize the extracellular space or apoplast and understanding the host–pathogen interactions that occur here is vital for engineering sustainable disease resistance in crops. Structural biology has played important roles in elucidating molecular mechanisms underpinning plant-pathogen interactions but only few studies have reported structures of extracellular complexes. This article highlights these resolved extracellular complexes by describing the insights gained from the solved structures of complexes consisting of CERK1-chitin, FLS2-flg22-BAK1, RXEG1-XEG1-BAK1 and PGIP2-FpPG. Finally, we discuss the potential of AI-based structure prediction platforms like AlphaFold as an alternative hypothesis generator to rapidly advance our molecular understanding of plant pathology and develop novel strategies to increase crop resilience against disease.

植物病原体对全球农业和粮食安全构成严重威胁,尤其是在气候变化和农用化学品使用减少的压力下。大多数植物病原体最初定殖于细胞外空间或细胞凋亡体,了解在此发生的宿主与病原体之间的相互作用对于在作物中设计可持续的抗病性至关重要。结构生物学在阐明植物与病原体相互作用的分子机制方面发挥了重要作用,但只有少数研究报告了细胞外复合物的结构。本文通过描述从已解决的 CERK1-几丁质、FLS2-flg22-BAK1、RXEG1-XEG1-BAK1 和 PGIP2-FpPG 复合物结构中获得的启示,重点介绍了这些已解决的胞外复合物。最后,我们讨论了基于人工智能的结构预测平台(如 AlphaFold)作为另一种假设生成器的潜力,以快速推进我们对植物病理学的分子认识,并开发新的战略来提高作物的抗病能力。
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引用次数: 0
New frontiers in the biosynthesis of psychoactive specialized metabolites 精神活性特殊代谢物生物合成的新领域
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-16 DOI: 10.1016/j.pbi.2024.102626
Ginny Li, Peter J. Facchini

The recent relaxation of psychedelic drug regulations has prompted extensive clinical investigation into their potential use to treat diverse mental health conditions including anxiety, depression, post-traumatic stress, and substance-abuse disorders. Most clinical trials have relied on a small number of known molecules found in nature, such as psilocybin, or long-known synthetic analogs of natural metabolites, including lysergic acid diethylamide (LSD). Elucidation of biosynthetic pathways leading to several psychedelic compounds has established an opportunity to use synthetic biology as a complement to synthetic chemistry for the preparation of novel derivatives with potentially superior pharmacological properties compared with known drugs. Herein we review the metabolic biochemistry of pathways from plants, fungi and animals that yield the medicinally important hallucinogenic specialized metabolites ibogaine, mescaline, psilocybin, lysergic acid, and N,N-dimethyltryptamine (DMT). We also summarize the reconstitution of these pathways in microorganisms and comment on the integration of native and non-native enzymes to prepare novel derivatives.

最近,迷幻药法规的放宽促使人们对迷幻药治疗焦虑、抑郁、创伤后应激和药物滥用等各种精神疾病的潜力进行了广泛的临床研究。大多数临床试验都依赖于在自然界中发现的少量已知分子,如迷幻药,或早已为人所知的天然代谢物的合成类似物,包括麦角酰二乙胺(LSD)。阐明了几种迷幻化合物的生物合成途径,为利用合成生物学作为合成化学的补充,制备新型衍生物提供了机会,这些衍生物的药理特性可能优于已知药物。在此,我们回顾了植物、真菌和动物产生具有重要药用价值的致幻专一代谢物伊博格碱、麦司卡林、迷幻药、麦角酸和 N,N-二甲基色胺(DMT)的途径的代谢生物化学。我们还总结了在微生物中重组这些途径的情况,并对整合本地和非本地酶来制备新型衍生物发表了评论。
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引用次数: 0
At knifepoint: Appressoria-dependent turgor pressure of filamentous plant pathogens 在刀尖上丝状植物病原体依赖外植体的张力压力
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-11 DOI: 10.1016/j.pbi.2024.102628
Tobias Müller, David Scheuring

Filamentous pathogens need to overcome plant barriers for successful infection. To this end, special structures, most commonly appressoria, are used for penetration. In differentiated appressoria, the generation of high turgor pressure is mandatory to breach plant cell wall and cuticle. However, quantitative description of turgor pressure and resulting invasive forces are only described for a handful of plant pathogens. Recent advances in methodology allowed determination of surprisingly high pressures and corresponding forces in oomycetes and a necrotrophic fungus. Here, we describe turgor generation in appressoria as essential function for host penetration. We summarize the known experimentally determined turgor pressure as well as invasive forces and discuss their universal role in plant pathogen infection.

丝状病原体需要克服植物障碍才能成功感染。为此,病原体需要利用特殊结构(最常见的是附着体)进行穿透。在分化的附着体中,必须产生较高的抗压强度才能突破植物细胞壁和角质层。然而,只有少数几种植物病原体对睾酮压力和由此产生的侵袭力进行了定量描述。最近方法学的进步使得我们能够测定卵菌和一种坏死性真菌令人惊讶的高压力和相应的侵袭力。在这里,我们描述了作为宿主穿透的基本功能,在附着体中产生的张力。我们总结了已知的实验测定的变压和侵染力,并讨论了它们在植物病原体感染中的普遍作用。
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引用次数: 0
Different roles of the phytohormone gibberellin in the wide-spread arbuscular mycorrhiza and in orchid mycorrhiza 植物激素赤霉素在广布的树胶菌根和兰花菌根中的不同作用
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-08 DOI: 10.1016/j.pbi.2024.102627
Chihiro Miura , Takaya Tominaga , Hironori Kaminaka

Gibberellin (GA) is a classical plant hormone that regulates many physiological processes, such as plant growth, development, and environmental responses. GA inhibits arbuscular mycorrhizal (AM) symbiosis, the most ancient and widespread type of mycorrhizal symbiosis. Knowledge about mycorrhizal symbioses at the molecular level has been obtained mainly in model plants such as legumes and rice. In contrast, molecular mechanisms in non-model plants are still unclear. Recent studies have revealed the novel roles of GA in mycorrhizal symbioses: its positive effect in Paris-type AM symbiosis in Eustoma grandiflorum and its negative effect on both seed germination and mycorrhizal symbiosis in orchids. This review focuses on the recent data on GA function in AM and orchid mycorrhizal symbioses.

赤霉素(GA)是一种经典的植物激素,可调节植物生长、发育和环境反应等许多生理过程。GA 可抑制丛枝菌根(AM)共生,这是菌根共生中最古老、最普遍的一种类型。有关菌根共生的分子水平知识主要是从豆科植物和水稻等模式植物中获得的。相比之下,非模式植物的分子机制尚不清楚。最近的研究揭示了 GA 在菌根共生中的新作用:它对桔梗的巴黎型 AM 共生有积极作用,对兰花的种子萌发和菌根共生有消极作用。本综述将重点介绍有关 GA 在 AM 和兰花菌根共生中功能的最新数据。
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引用次数: 0
Meddling with the microbiota: Fungal tricks to infect plant hosts 干预微生物群:真菌感染植物宿主的伎俩
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-05 DOI: 10.1016/j.pbi.2024.102622
Fantin Mesny, Martha Bauer , Jinyi Zhu , Bart P.H.J. Thomma

Plants associate with a wealth of microbes, collectively referred to as the plant microbiota, whose composition is determined by host plant genetics, immune responses, environmental factors and intermicrobial relations. Unsurprisingly, microbiota compositions change during disease development. Recent evidence revealed that some of these changes can be attributed to effector proteins with antimicrobial activities that are secreted by plant pathogens to manipulate host microbiota to their advantage. Intriguingly, many of these effectors have ancient origins, predating land plant emergence, and evolved over long evolutionary trajectories to acquire selective antimicrobial activities to target microbial antagonists in host plant microbiota. Thus, we argue that host-pathogen co-evolution likely involved arms races within the host-associated microbiota.

植物与大量微生物(统称为植物微生物群)有联系,其组成由寄主植物遗传、免疫反应、环境因素和微生物间关系决定。毫不奇怪,微生物群的组成在疾病发展过程中会发生变化。最近的证据表明,其中一些变化可归因于植物病原体分泌的具有抗菌活性的效应蛋白,这些蛋白能操纵宿主微生物群,使其对自己有利。耐人寻味的是,这些效应蛋白中有许多起源古老,早于陆生植物的出现,并经过漫长的进化过程,获得了选择性抗菌活性,以宿主植物微生物群中的微生物拮抗剂为目标。因此,我们认为宿主与病原体的共同进化可能涉及宿主相关微生物群内部的军备竞赛。
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引用次数: 0
Unlocking specialized metabolism in medicinal plant biotechnology through plant–microbiome interactions 通过植物与微生物组的相互作用,开启药用植物生物技术中的特殊代谢。
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-05 DOI: 10.1016/j.pbi.2024.102620
Malorie Laffon , Justine Domont , Christophe Hano , Arnaud Lanoue , Nathalie Giglioli-Guivarc'h

Medicinal plants produce specialized metabolites (SM) that are used as drugs. However, due to low yields of field cultivation and the increasing market demand, this production method often failed to meet supply needs. Biotechnological alternatives, such as in vitro plant cultures, offer promising solutions. Nonetheless, SM production in these systems remains too low for industrial exploitation, necessitating an elicitation step to induce the plant defense metabolism. Traditional elicitation methods mimic environmental conditions that trigger plant-specialized metabolism, often with an artificial signal that mimics microbial interaction. Recent insights into the essential role of the plant microbiota, provides new opportunities for elicitation strategies by microbial coculture in a controlled environment. The successful co-culture of in vitro medicinal plants with synthetic microbial communities could enable sustainable production of pharmaceutically important SM.

药用植物产生的特殊代谢物(SM)可用作药物。然而,由于田间栽培产量低,而市场需求不断增加,这种生产方法往往无法满足供应需求。生物技术替代方法(如体外植物培养)提供了很有前景的解决方案。然而,这些系统中的 SM 产量仍然太低,无法进行工业化生产,因此需要一个诱导步骤来诱导植物的防御新陈代谢。传统的诱导方法是模拟环境条件来触发植物特化的新陈代谢,通常使用模拟微生物相互作用的人工信号。最近对植物微生物群重要作用的深入研究,为在受控环境中通过微生物共培养实施诱导策略提供了新的机会。体外药用植物与合成微生物群落的成功共培养可实现具有重要药用价值的 SM 的可持续生产。
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引用次数: 0
Specialized metabolism in St John's wort 圣约翰草的特殊新陈代谢
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-04 DOI: 10.1016/j.pbi.2024.102625
Song Wu , Evangelos C. Tatsis

The specialized metabolism of St. John's wort, Hypericum perforatum L., is a key focus in medicinal plant research due to its hallmark bioactive compounds hyperforin and hypericin. Known for its traditional medicinal uses dating back to ancient times, St. John's wort is currently used for mild depression therapy. Recent research works have shed light on the biosynthesis of various metabolites in this plant, such as flavonoids, xanthones, hyperforin, and hypericin. The elucidation of these pathways, along with the discovery of novel enzymes like hyperforin synthase, support the pharmaceutical research by enabling scalable production of bioactive compounds for the development of new drugs. Elucidation of the hyperforin biosynthesis based on single-cell RNA-seq is an approach that will be expanded and accelerate the gene discovery and full pathway reconstitution of plant specialized metabolites.

圣约翰草(Hypericum perforatum L.)的特殊新陈代谢是药用植物研究的一个重点,因为它具有标志性的生物活性化合物金丝桃素(hyperforin)和金丝桃素(hypericin)。圣约翰草的传统药用价值可追溯到古代,目前被用于轻度抑郁症的治疗。最近的研究工作揭示了这种植物中各种代谢物的生物合成过程,如类黄酮、黄酮、金丝桃素和金丝桃甙。对这些途径的阐明,以及新酶(如金丝桃素合成酶)的发现,为制药研究提供了支持,使生物活性化合物的规模化生产成为可能,从而有助于新药的开发。以单细胞 RNA-seq 为基础阐明金丝桃素的生物合成是一种可扩展的方法,它将加速植物特殊代谢产物的基因发现和全途径重组。
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引用次数: 0
An emerging connected view: Phytocytokines in regulating stomatal, apoplastic, and vascular immunity 新出现的关联观点:调节气孔、凋亡和血管免疫的植物细胞因子
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-04 DOI: 10.1016/j.pbi.2024.102623
Yunqing Jian , Zunyong Liu , Ping He, Libo Shan

Foliar pathogens exploit natural openings, such as stomata and hydathodes, to invade plants, multiply in the apoplast, and potentially spread through the vasculature. To counteract these threats, plants dynamically regulate stomatal movement and apoplastic water potential, influencing hydathode guttation and water transport. This review highlights recent advances in understanding how phytocytokines, plant small peptides with immunomodulatory functions, regulate these processes to limit pathogen entry and proliferation. Additionally, we discuss the coordinated actions of stomatal movement, hydathode guttation, and the vascular system in restricting pathogen entry, multiplication, and dissemination. We also explore future perspectives and key questions arising from these findings, aiming to advance our knowledge of plant immunity and improve disease resistance strategies.

叶面病原体利用气孔和水瘤等天然开口侵入植物,在凋亡体中繁殖,并有可能通过脉管传播。为了抵御这些威胁,植物会动态调节气孔运动和凋亡体水势,影响水瘤萌发和水分运输。本综述重点介绍了在了解植物细胞因子(具有免疫调节功能的植物小肽)如何调节这些过程以限制病原体进入和增殖方面的最新进展。此外,我们还讨论了气孔运动、水气孔和维管系统在限制病原体进入、繁殖和传播方面的协调作用。我们还探讨了这些发现的未来前景和关键问题,旨在增进我们对植物免疫的了解,改进抗病策略。
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引用次数: 0
Plant microtubule nucleating apparatus and its potential signaling pathway 植物微管成核装置及其潜在信号途径
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-09-03 DOI: 10.1016/j.pbi.2024.102624
Noriyoshi Yagi , Satoshi Fujita , Masayoshi Nakamura

Plant cell cortical microtubules are located beneath the plasma membrane and direct the location of cellulose synthases during interphase, influencing cell morphology. Microtubule-associated proteins (MAPs) regulate these microtubules in response to growth and environmental stimuli. This review focuses on recent advances in understanding microtubule nucleation mechanisms in plants and the spatiotemporal regulation of cortical arrays via phytohormone signaling. Emphasis is placed on the conserved nature of the gamma-tubulin ring complex (γTuRC) and plant-specific components. The discussion includes the role of the Augmin complex and the distinct function of the Msd1-Wdr8 complex in plants. We also explore the effects of hormone signaling, particularly brassinosteroids, on the microtubule regulatory apparatus. The interplay between hormone signaling pathways and microtubule dynamics, including phosphorylation events and post-translational modifications, is also addressed. Finally, the impact of environmental signals and the role of protein post-translational modifications in regulating microtubule organization are suggested for future research.

植物细胞皮层微管位于质膜下方,在细胞间期引导纤维素合成酶的位置,影响细胞形态。微管相关蛋白(MAPs)调节这些微管,以应对生长和环境刺激。这篇综述重点介绍在了解植物微管成核机制以及通过植物激素信号对皮层阵列进行时空调控方面的最新进展。重点是γ-微管蛋白环复合体(γTuRC)和植物特异性成分的保守性。讨论内容包括 Augmin 复合物的作用以及植物中 Msd1-Wdr8 复合物的独特功能。我们还探讨了激素信号,特别是铜激素对微管调节装置的影响。我们还探讨了激素信号途径与微管动力学之间的相互作用,包括磷酸化事件和翻译后修饰。最后,对环境信号的影响和蛋白质翻译后修饰在调节微管组织中的作用提出了未来研究的建议。
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引用次数: 0
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Current opinion in plant biology
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