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Celastrol: A century-long journey from the isolation to the biotechnological production and the development of an antiobesity drug 塞拉斯托尔:从分离到生物技术生产以及开发抗肥胖药物的百年历程。
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-08-10 DOI: 10.1016/j.pbi.2024.102615
Yong Zhao, Karel Miettinen, Sotirios C. Kampranis

Celastrol, a triterpenoid found in the root of the traditional medicinal plant Tripterygium wilfordii, is a potent anti-inflammatory and antiobesity agent. However, pharmacological exploitation of celastrol has been hindered by the limited accessibility of plant material, the co-existence of other toxic compounds in the same plant tissue, and the lack of an efficient chemical synthesis method. In this review, we highlight recent progress in elucidating celastrol biosynthesis and discuss how this knowledge can facilitate its scalable bioproduction using cell factories and its further development as an antiobesity and anti-inflammatory drug.

Celastrol 是一种三萜类化合物,存在于传统药用植物三尖杉(Tripterygium wilfordii)的根部,是一种有效的抗炎和抗肥胖剂。然而,由于植物材料的可获取性有限、同一植物组织中同时存在其他有毒化合物以及缺乏高效的化学合成方法等原因,芹菜酚的药理开发一直受到阻碍。在这篇综述中,我们将重点介绍在阐明芹菜醇生物合成方面取得的最新进展,并讨论这些知识如何促进利用细胞工厂进行可扩展的生物生产,以及如何将其进一步开发为一种抗肥胖和抗炎药物。
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引用次数: 0
Composition and function of plant chromatin remodeling complexes 植物染色质重塑复合物的组成和功能。
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-08-07 DOI: 10.1016/j.pbi.2024.102613
Jing Guo , Xin-Jian He

ATP-dependent chromatin remodelers play a crucial role in modifying chromatin configuration by utilizing the energy of ATP hydrolysis. They are involved in various processes, including transcription, DNA replication, and maintaining genome stability. These remodeling remodelers usually form multi-subunit chromatin remodeling complexes in eukaryotes. In plants, chromatin remodeling complexes have diverse functions in regulating plant development and stress response. Recent studies have conducted extensive research on plant chromatin remodeling complexes. This review focuses on recent advances in the classification and composition of plant chromatin remodeling complexes, the protein–protein interactions within the complexes, their impact on chromatin configuration, and their interactions with chromatin modifications and transcription factors.

依赖 ATP 的染色质重塑器利用 ATP 水解的能量在改变染色质构型方面发挥着至关重要的作用。它们参与各种过程,包括转录、DNA 复制和维持基因组稳定性。在真核生物中,这些重塑重塑子通常形成多亚基染色质重塑复合体。在植物中,染色质重塑复合体在调控植物发育和应激反应方面具有多种功能。最近的研究对植物染色质重塑复合物进行了广泛的研究。本综述将重点介绍植物染色质重塑复合物的分类和组成、复合物内蛋白质与蛋白质之间的相互作用、它们对染色质构型的影响以及它们与染色质修饰和转录因子之间的相互作用等方面的最新进展。
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引用次数: 0
β-Glucan-binding proteins are key modulators of immunity and symbiosis in mutualistic plant–microbe interactions β-葡聚糖结合蛋白是植物与微生物互作过程中免疫和共生的关键调节因子。
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-08-05 DOI: 10.1016/j.pbi.2024.102610
Sarah van Boerdonk , Pia Saake , Alan Wanke , Ulla Neumann , Alga Zuccaro

In order to discriminate between detrimental, commensal, and beneficial microbes, plants rely on polysaccharides such as β-glucans, which are integral components of microbial and plant cell walls. The conversion of cell wall-associated β-glucan polymers into a specific outcome that affects plant-microbe interactions is mediated by hydrolytic and non-hydrolytic β-glucan-binding proteins. These proteins play crucial roles during microbial colonization: they influence the composition and resilience of host and microbial cell walls, regulate the homeostasis of apoplastic concentrations of β-glucan oligomers, and mediate β-glucan perception and signaling. This review outlines the dual roles of β-glucans and their binding proteins in plant immunity and symbiosis, highlighting recent discoveries on the role of β-glucan-binding proteins as modulators of immunity and as symbiosis receptors involved in the fine-tuning of microbial accommodation.

为了区分有害微生物、共生微生物和有益微生物,植物依赖于多糖,如β-葡聚糖,它们是微生物和植物细胞壁不可或缺的组成部分。细胞壁相关的β-葡聚糖聚合物转化为影响植物与微生物相互作用的特定结果,是由水解和非水解β-葡聚糖结合蛋白介导的。这些蛋白在微生物定植过程中发挥着至关重要的作用:它们影响宿主和微生物细胞壁的组成和弹性,调节β-葡聚糖低聚物的凋亡浓度的平衡,并介导β-葡聚糖的感知和信号传递。这篇综述概述了β-葡聚糖及其结合蛋白在植物免疫和共生中的双重作用,重点介绍了最近发现的β-葡聚糖结合蛋白作为免疫调节剂和共生受体参与微调微生物适应性的作用。
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引用次数: 0
Engineering Nicotiana benthamiana as a platform for natural product biosynthesis 将烟草工程作为天然产品生物合成的平台。
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-08-03 DOI: 10.1016/j.pbi.2024.102611
D. Golubova , C. Tansley , H. Su , N.J. Patron

Nicotiana benthamiana is a model plant, widely used for research. The susceptibility of young plants to Agrobacterium tumefaciens has been utilised for transient gene expression, enabling the production of recombinant proteins at laboratory and commercial scales. More recently, this technique has been used for the rapid prototyping of synthetic genetic circuits and for the elucidation and reconstruction of metabolic pathways. In the last few years, many complex metabolic pathways have been successfully reconstructed in this species. In addition, the availability of improved genomic resources and efficient gene editing tools have enabled the application of sophisticated metabolic engineering approaches to increase the purity and yield of target compounds. In this review, we discuss recent advances in the use of N. benthamiana for understanding and engineering plant metabolism, as well as efforts to improve the utility of this species as a production chassis for natural products.

烟草是一种广泛用于研究的模式植物。利用幼苗对农杆菌的敏感性进行瞬时基因表达,可在实验室和商业规模上生产重组蛋白质。最近,这种技术还被用于合成基因电路的快速原型设计以及代谢途径的阐明和重建。在过去几年中,已在该物种中成功重建了许多复杂的代谢途径。此外,改进的基因组资源和高效的基因编辑工具的可用性使得复杂的代谢工程方法得以应用,从而提高了目标化合物的纯度和产量。在这篇综述中,我们将讨论利用 N. benthamiana 了解和改造植物代谢的最新进展,以及为提高该物种作为天然产品生产底盘的实用性所做的努力。
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引用次数: 0
“To remember or forget: Insights into the mechanisms of epigenetic reprogramming and priming in early plant embryos” "记忆或遗忘:早期植物胚胎表观遗传重编程和引物机制的启示"。
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-08-03 DOI: 10.1016/j.pbi.2024.102612
Leonardo Jo , Michael D. Nodine

Chromatin is dynamically modified throughout the plant life cycle to regulate gene expression in response to environmental and developmental cues. Although such epigenetic information can be inherited across generations in plants, chromatin features that regulate gene expression are typically reprogrammed during plant gametogenesis and directly after fertilization. Nevertheless, environmentally induced epigenetic marks on genes can be transmitted across generations. Moreover, epigenetic information installed on early embryonic chromatin can be stably inherited during subsequent growth and influence how plants respond to environmental conditions much later in development. Here, we review recent breakthroughs towards deciphering mechanisms underlying epigenetic reprogramming and transcriptional priming during early plant embryogenesis.

染色质在植物的整个生命周期中都会发生动态变化,以调节基因表达,对环境和发育线索做出响应。虽然这种表观遗传信息可以在植物中跨代遗传,但调控基因表达的染色质特征通常是在植物配子发生过程中和受精后直接重编程的。不过,环境诱导的基因表观遗传标记可以跨代传递。此外,安装在早期胚胎染色质上的表观遗传信息可在随后的生长过程中稳定遗传,并影响植物在发育后期对环境条件的反应。在此,我们回顾了最近在破译植物早期胚胎发生过程中表观遗传重编程和转录起始机制方面取得的突破。
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引用次数: 0
The case for sporadic cyanogenic glycoside evolution in plants 植物中零星氰苷进化的案例。
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-07-31 DOI: 10.1016/j.pbi.2024.102608
Raquel Sánchez-Pérez , Elizabeth HJ. Neilson

Cyanogenic glycosides are α-hydroxynitrile glucosides present in approximately 3000 different plant species. Upon tissue disruption, cyanogenic glycosides are hydrolyzed to release toxic hydrogen cyanide as a means of chemical defense. Over 100 different cyanogenic glycosides have been reported, with structural diversity dependent on the precursor amino acid, and subsequent modifications. Cyanogenic glycosides represent a prime example of sporadic metabolite evolution, with the metabolic trait arising multiple times throughout the plant lineage as evidenced by recruitment of different enzyme families for biosynthesis. Here, we review the latest developments within cyanogenic glycoside biosynthesis, and argue possible factors driving sporadic evolution including shared intermediates and crossovers with other metabolic pathways crossovers, and metabolite multifunctionality beyond chemical defense.

生氰苷是存在于大约 3000 种不同植物中的α-羟腈葡糖苷。组织受到破坏时,氰苷会水解释放出有毒的氰化氢,作为一种化学防御手段。已报道的氰苷有 100 多种,其结构多样性取决于前体氨基酸和随后的修饰。生氰苷是零星代谢物进化的一个典型例子,其代谢特征在整个植物品系中多次出现,这可以通过招募不同的酶家族进行生物合成得到证明。在此,我们回顾了氰苷类生物合成的最新进展,并论证了驱动零星进化的可能因素,包括与其他代谢途径交叉的共享中间体和交叉,以及代谢物在化学防御之外的多功能性。
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引用次数: 0
The gynostemium: More than the sum of its parts with emerging floral complexities 绞股蓝:新出现的复杂花朵,超越了各部分的总和。
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-07-30 DOI: 10.1016/j.pbi.2024.102609
Natalia Pabón-Mora , Favio González

Partial or complete floral organ fusion, which occurs in most angiosperm lineages, promotes integration of whorls leading to specialization and complexity. One of the most remarkable floral organ fusions occurs in the gynostemium, a highly specialized structure formed by the congenital fusion of the androecium and the upper portion of the gynoecium. Here we review the gynostemia evolution across flowering plants, the morphological requirements for the synorganization of the two fertile floral whorls, and the molecular basis most likely responsible for such intimate fusion process.

部分或完全的花器官融合发生在大多数被子植物品系中,它促进了轮生花器的整合,从而导致花器的特化和复杂化。合蕊柱是最显著的花器官融合之一,它是由雄蕊群和雌蕊群上部先天融合形成的高度特化结构。在此,我们回顾了有花植物中雌蕊群的进化、两个可育花轮合成的形态要求,以及最有可能导致这种亲密融合过程的分子基础。
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引用次数: 0
The evolution of tropane alkaloids: Coca does it differently 托烷生物碱的演变:古柯的演化与众不同
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-07-26 DOI: 10.1016/j.pbi.2024.102606
Benjamin Gabriel Chavez, Sara Leite Dias, John Charles D'Auria

It is undeniable that tropane alkaloids (TAs) have been both beneficial and detrimental to human health in the modern era. Understanding their biosynthesis is vital for using synthetic biology to engineer organisms for pharmaceutical production. The most parsimonious approaches to pathway elucidation are traditionally homology-based methods. However, this approach has largely failed for TA biosynthesis in angiosperms. In the recent decade, significant progress has been made in elucidating the TA synthesis pathway in Erythroxylum coca, highlighting the parallel development of TAs in both the Solanaceae and Erythroxylaceae families. This separate evolutionary path has uncovered substantial divergence in the TAs formed by E. coca and distinct enzymatic reactions that differ from the traditional TA biosynthetic pathway found in TA-producing nightshade plants.

不可否认,在现代社会,对人类健康有益和有害的生物碱(TAs)都存在。了解它们的生物合成过程对于利用合成生物学改造生物体以生产药物至关重要。传统上,最简便的途径阐明方法是基于同源性的方法。然而,这种方法在被子植物的 TA 生物合成中基本失效。近十年来,在阐明古柯红豆杉(Erythroxylum coca)的 TA 合成途径方面取得了重大进展,突显了茄科和红豆杉科中 TA 的平行发展。这一独立的进化路径发现了古柯 E. 形成的 TAs 的实质性差异,以及与产生 TA 的茄科植物的传统 TA 生物合成途径不同的独特酶促反应。
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引用次数: 0
Cellular insights into legume root infection by rhizobia 根瘤菌感染豆科植物根部的细胞洞察力。
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-07-26 DOI: 10.1016/j.pbi.2024.102597
Fernanda de Carvalho-Niebel , Joëlle Fournier , Anke Becker , Macarena Marín Arancibia

Legume plants establish an endosymbiosis with nitrogen-fixing rhizobia bacteria, which are taken up from the environment anew by each host generation. This requires a dedicated genetic program on the host side to control microbe invasion, involving coordinated reprogramming of host cells to create infection structures that facilitate inward movement of the symbiont. Infection initiates in the epidermis, with different legumes utilizing distinct strategies for crossing this cell layer, either between cells (intercellular infection) or transcellularly (infection thread infection). Recent discoveries on the plant side using fluorescent-based imaging approaches have illuminated the spatiotemporal dynamics of infection, underscoring the importance of investigating this process at the dynamic single-cell level. Extending fluorescence-based live-dynamic approaches to the bacterial partner opens the exciting prospect of learning how individual rhizobia reprogram from rhizospheric to a host-confined state during early root infection.

豆科植物与固氮根瘤菌建立了内共生关系,每一代宿主都会从环境中吸收新的固氮根瘤菌。这就需要宿主一方有专门的基因程序来控制微生物的入侵,其中包括对宿主细胞进行协调重编程,以创建有利于共生体向内移动的感染结构。感染从表皮开始,不同的豆科植物利用不同的策略穿过这一细胞层,或在细胞间感染(细胞间感染),或跨细胞感染(感染线感染)。最近利用荧光成像方法在植物方面的发现揭示了感染的时空动态,强调了在动态单细胞水平研究这一过程的重要性。将基于荧光的实时动态方法扩展到细菌伙伴,为了解单个根瘤菌如何在早期根部感染过程中从根瘤层重新编程为宿主封闭状态开辟了令人兴奋的前景。
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引用次数: 0
Plant specialized metabolism: Diversity of terpene synthases and their products 植物的特殊代谢:萜烯合成酶及其产物的多样性。
IF 8.3 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-07-24 DOI: 10.1016/j.pbi.2024.102607
Matthew E. Bergman , Natalia Dudareva

Terpenoids are ubiquitous to all kingdoms of life and are one of the most diverse groups of compounds, both structurally and functionally. Despite being derived from common precursors, isopentenyl diphosphate and dimethylallyl diphosphate, their exceptional diversity is partly driven by the substrate and product promiscuity of terpene synthases that produce a wide array of terpene skeletons. Plant terpene synthases can be subdivided into different subfamilies based on sequence homology and function. However, in many cases, structural architecture of the enzyme is more essential to product specificity than primary sequence alone, and distantly related terpene synthases can often mediate similar reactions. As such, the focus of this brief review is on some of the recent progress in understanding terpene synthase function and diversity.

萜类化合物在生物界无处不在,是结构和功能最多样化的化合物之一。尽管萜类化合物来自共同的前体--二磷酸异戊烯酯和二磷酸二甲基烯丙基酯,但其特殊的多样性在一定程度上是由萜烯合成酶的底物和产物杂交性所驱动的,这种合成酶可产生多种萜烯骨架。根据序列同源性和功能,植物萜烯合成酶可细分为不同的亚家族。不过,在许多情况下,酶的结构构造对产品特异性的影响比单纯的主序列更为重要,而且远缘的萜烯合成酶往往可以介导类似的反应。因此,本简要综述的重点是了解萜烯合成酶功能和多样性方面的最新进展。
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引用次数: 0
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Current opinion in plant biology
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