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Transcriptomic and metabonomic analysis of quorum sensing signal (N-octanoyl-DL-homoserine lactone) on regulating poplar fine roots growth 群体感应信号(n -辛烷酰- dl -高丝氨酸内酯)调控杨树细根生长的转录组学和代谢组学分析
IF 4.7 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-08-29 DOI: 10.1016/j.envexpbot.2025.106229
Qi Liang Zhu , Nian Zhao Wang , Wen Hao Han , Shu Qi Ma , You Lv , Yan Ping Wang
Root-microbe transboundary communication is important to dominate the interaction between plant and microorganism. However, the influence of quorum sensing signals among bacteria community on the root growth and development is still obscure. The study focused on one quorum sensing signal isolated from poplar rhizosphere, N-octanoyl-DL-homoserine lactone (C8-HSL), and examined its influence on the morphological structure, ultrastructure, and subcellular structure of poplar roots. Transcriptome and metabolome sequencing were further performed to reveal the potential mechanisms of C8-HSL regulating the root morphological development. The results showed C8-HSL demonstrated dual regulatory effects on the growth of poplar fine roots. At high concentrations (more than 100 μM), root growth of poplar seedlings was suppressed by C8-HSL, and the primary and lateral roots appeared short and thick. Conversely, at low concentrations (10 nM), root growth was promoted by C8-HSL, and the primary and lateral roots were elongated. Fluorescent probes indicated that Ca2 + , reactive oxygen species (ROS), and nitric oxide (NO) in root tip cells were significantly up-regulated at concentrations more than 1 μM of C8-HSL, while only Ca2+ and NO concentration were significantly up-regulated at concentrations less than 1 μM of C8-HSL. Transcriptome and metabolome analysis further revealed that high concentration C8-HSL significantly upregulated the expression of poplar genes related to secondary wall biogenesis (e.g., MYB46, MYB83, CESA) and auxin transport (e.g., PIN6, AUX22B, GH3.6). In contrast, low concentration C8-HSL upregulated calmodulin expression and increased indoleacrylic acid and 3-indolebutyric acid content. Taken together, these findings provide a deeper insight to the interaction between root and microbes, and imply the potential utilization of quorum sensing signals in regulating root growth.
根微生物的跨界交流对植物与微生物的相互作用起着重要的主导作用。然而,细菌群落群体感应信号对根系生长发育的影响尚不清楚。以杨根际n -辛烷酰dl -高丝氨酸内酯(C8-HSL)为研究对象,研究了其对杨根的形态结构、超微结构和亚细胞结构的影响。通过转录组和代谢组测序进一步揭示C8-HSL调控根形态发育的潜在机制。结果表明,C8-HSL对杨树细根的生长具有双重调控作用。高浓度(≥100 μM)下,C8-HSL抑制杨树幼苗根系生长,主根和侧根变短变粗。相反,在低浓度(10 nM)下,C8-HSL促进根生长,主根和侧根伸长。荧光探针显示,当C8-HSL浓度大于1 μM时,根尖细胞内Ca2+ +、活性氧(ROS)和一氧化氮(NO)浓度显著上调,而当C8-HSL浓度小于1 μM时,只有Ca2+和NO浓度显著上调。转录组学和代谢组学分析进一步发现,高浓度C8-HSL显著上调杨树次生壁生物发生相关基因(如MYB46、MYB83、CESA)和生长素运输相关基因(如PIN6、AUX22B、GH3.6)的表达。低浓度C8-HSL上调钙调素表达,增加吲哚丙烯酸和3-吲哚丁酸含量。综上所述,这些发现为根与微生物之间的相互作用提供了更深入的了解,并暗示了群体感应信号在调节根生长方面的潜在利用。
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引用次数: 0
Phenylpropanoid derived flavonoid biosynthesis pathway compensates for abiotic and biotic stress tolerance in dhurrin-free forage sorghum 苯丙类黄酮生物合成途径补偿无苦豆素饲草高粱的非生物和生物胁迫耐受性
IF 4.7 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-08-28 DOI: 10.1016/j.envexpbot.2025.106230
Anita Kumari , Alondra Cruz , Pallavi Dhiman , S.M. Impa , Mitchell R. Tuinstra , Gunvant B. Patil , S.V. Krishna Jagadish
Sorghum (Sorghum bicolor L. Moench) is a multipurpose cereal valued for its drought tolerance and biomass productivity. Despite its agronomic advantages, the widespread adoption of sorghum as a forage crop is significantly limited by the presence of dhurrin, a cyanogenic glucoside that, upon stress or herbivory, releases hydrogen cyanide (HCN), posing considerable risks to grazing animals. This study systematically investigated the metabolic ramifications of dhurrin elimination in a prussic acid-free (PF) sorghum genotype cultivated under contrasting irrigation regimes. The major aim was to elucidate the consequences of the loss of cyanogenesis on both agronomic performance and the modulation of stress-associated metabolic pathways. Untargeted metabolomics using UHPLC-QTOF-MS revealed significant metabolic reprogramming in PF sorghum, with comparable biomass and no yield penalty. Over 470 metabolites were differentially accumulated, including reduced alkaloids and phenolic acids and increased flavonoids, terpenoids, and jasmonates. Metabolic flux was redirected from dhurrin synthesis toward 4-coumarate-derived phenylpropanoid and flavonoid pathways, boosting antioxidant production. Upregulated jasmonic acid biosynthesis suggests activation of alternative defence signalling. The loss of dhurrin leads to a comprehensive specialization of metabolism favoring antioxidant and hormone pathways without compromising growth, providing key insights for developing safer, resilient prussic acid-free forage sorghum.
高粱(Sorghum bicolor L. Moench)是一种多用途谷物,因其耐旱性和生物量生产力而受到重视。尽管高粱具有农艺上的优势,但它作为饲料作物的广泛采用受到苦胆素的极大限制。苦胆素是一种产氰的葡萄糖苷,在受到胁迫或草食时,会释放出氰化氢(HCN),对放牧动物构成相当大的风险。本研究系统地研究了在不同灌溉制度下栽培的无普鲁士酸(PF)高粱基因型苦胆素消除的代谢后果。主要目的是阐明失氰对农艺性能和应激相关代谢途径调节的影响。利用UHPLC-QTOF-MS进行的非靶向代谢组学研究显示,PF高粱具有显著的代谢重编程,生物量相当,没有产量损失。超过470种代谢物不同程度地积累,包括减少的生物碱和酚酸,增加的黄酮类、萜类和茉莉酸。代谢通量从苦素合成转向4-香豆酸衍生的苯丙酸和类黄酮,促进抗氧化剂的产生。茉莉酸生物合成的上调表明替代防御信号的激活。苦胆素的损失导致代谢的全面专业化,有利于抗氧化和激素途径,而不影响生长,为开发更安全,更有弹性的无普鲁士酸饲草高粱提供了关键见解。
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引用次数: 0
Metabolic and antioxidant responses drive Haloxylon ammodendron’s adaptation to drip irrigation with saline and freshwater in saline-alkali soils 盐碱地梭梭代谢和抗氧化反应驱动梭梭适应盐水和淡水滴灌
IF 4.7 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-08-26 DOI: 10.1016/j.envexpbot.2025.106225
Haitao Dou , Qiao Xu , Tao Lin , Zewen Tong , Aishajiang Aili , Hailiang Xu
Saline water irrigation represents a promising strategy for addressing freshwater scarcity and rehabilitating saline-alkali lands, yet the molecular mechanisms underlying plant adaptation to varying salt conditions remain poorly understood. This study investigated the molecular responses of Haloxylon ammodendron(H. ammodendron) to freshwater versus saline water drip irrigation in saline-alkali soils using integrated transcriptomic and metabolomic analyses coupled with dynamic soil ion monitoring. Freshwater irrigation temporarily reduced soil Na⁺ and Cl⁻ levels through leaching but caused Ca²⁺ and SO₄²⁻ accumulation, while saline water irrigation initially increased Na⁺ and Cl⁻ concentrations before achieving ion rebalancing and pH stabilization. Transcriptomic analysis revealed distinct molecular responses: freshwater irrigation induced 1305 differentially expressed genes primarily associated with secondary metabolite biosynthesis and antioxidant pathways, whereas saline water irrigation activated 825 genes enriched in carbohydrate metabolism and flavonoid biosynthesis. Metabolomic profiling showed higher numbers of differentially expressed metabolites under freshwater irrigation, particularly organic acids and amino acids. Correlation analysis demonstrated that saline water irrigation enhances salt tolerance through suppressed gene expression and metabolic pathway reconstruction, notably involving key flavonoid biosynthesis genes (SS2296411, SS3033913) that enable precise adaptation to salt fluctuations. These findings reveal that H. ammodendron maintains physiological homeostasis under salt stress by dynamically regulating secondary metabolism, energy balance, and antioxidant systems, providing theoretical foundations for optimizing saline water utilization and developing salt-tolerant crops through targeted genetic engineering.
盐水灌溉是解决淡水短缺和恢复盐碱地的一种有希望的策略,但植物适应不同盐条件的分子机制仍然知之甚少。本文研究了梭梭(Haloxylon ammodendron, H。利用综合转录组学和代谢组学分析以及动态土壤离子监测,在盐碱土壤中梭梭(Ammodendron)对淡水和盐水滴灌的影响。淡水灌溉通过浸出暂时降低了土壤中Na⁺和Cl⁻的含量,但导致了Ca 2 +和SO₄2⁻的积累,而盐水灌溉最初增加了Na⁺和Cl⁻的浓度,然后实现了离子的再平衡和pH的稳定。转录组学分析揭示了不同的分子响应:淡水灌溉诱导了1305个主要与次级代谢物生物合成和抗氧化途径相关的差异表达基因,而盐水灌溉激活了825个富含碳水化合物代谢和类黄酮生物合成的基因。代谢组学分析显示,淡水灌溉条件下差异表达的代谢物数量较多,特别是有机酸和氨基酸。相关分析表明,盐水灌溉通过抑制基因表达和代谢途径重建来增强盐耐受性,特别是涉及能够精确适应盐波动的关键类黄酮生物合成基因(SS2296411, SS3033913)。这些发现揭示了梭梭在盐胁迫下通过动态调节次生代谢、能量平衡和抗氧化系统来维持生理稳态,为通过定向基因工程优化咸水利用和培育耐盐作物提供了理论基础。
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引用次数: 0
High boron in irrigation water mitigates drought stress effects on 'Carrizo' citrange seedlings 高硼灌溉水减轻了‘Carrizo’柑橘幼苗的干旱胁迫效应
IF 4.7 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-08-24 DOI: 10.1016/j.envexpbot.2025.106228
M. Tasa , M. González-Guzmán , V. Arbona , J.G. Pérez-Pérez
Cultivating citrus in semi-arid areas exposes them to drought periods and sometimes irrigation with non-conventional water sources (e.g. reclaimed water and desalinated seawater) containing high boron (B) concentration. This study aims to determine how high B influences plant water relations and water transport in well-watered (WW) and drought-stressed (DS) ‘Carrizo’ citrange [Citrus sinensis (L.) Osb. × Poncirus trifoliata L.] seedlings during a stress period and after rewatering. Seedlings were well-watered with control B (0.11 mg·L−1) or high B concentration (5 mg·L−1) for 29 days. Then irrigation was withheld from half the plants for 7 days (drought-stressed, DS), followed by a 10-day re-irrigation period using control B. High B irrigation increased endogenous B accumulation, without reaching toxic levels as chlorophyll fluorescence parameters remained unaltered and plant water status was unaffected. However, partial stomatal closure mediated by a 1.8-fold increase in foliar ABA accumulation decreased transpiration and photosynthesis. Under drought stress, plants irrigated with high B concentration better maintained their leaf water status, with leaf water potential decreasing by only 0.9 MPa compared to 1.8 MPa decrease in Control B-DS plants relative to their respective well-watered plants. Thus, high B enhanced drought tolerance through ABA-mediated stomatal regulation, allowing more conservative water use during drought. Plant water status of high B plants recovered faster and more completely than control B plants, which experienced greater drought-induced damage.
在半干旱地区种植柑橘会使它们面临干旱期,有时还会使用含有高硼(B)浓度的非常规水源(如再生水和脱盐海水)进行灌溉。本研究旨在确定高B对水分充足(WW)和干旱胁迫(DS)‘Carrizo’柑橘(Citrus sinensis (L.))植株水分关系和水分运输的影响。的Osb。× 三叶松[Poncirus trifoliata L.]幼苗在胁迫期和复水后。用对照B(0.11 mg·L−1)或高浓度B(5 mg·L−1)充分浇水29 d。然后,一半的植株停止灌溉7天(干旱胁迫,DS),然后使用对照B进行10天的再灌溉期。高B灌溉增加了内源B的积累,但没有达到毒性水平,因为叶绿素荧光参数保持不变,植物水分状况不受影响。然而,叶片ABA积累增加1.8倍介导的部分气孔关闭降低了蒸腾和光合作用。在干旱胁迫下,高浓度灌水的植株叶片水分状态保持得更好,叶片水势仅下降0.9 MPa,而对照B- ds植株叶片水势相对于水分充足的植株下降1.8 MPa。因此,高B通过aba介导的气孔调节增强了抗旱性,使干旱期间的水分利用更加保守。高B植株植株水分状况恢复速度快、恢复完全,而对照植株遭受的旱情损害更大。
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引用次数: 0
Seasonal changes rather than competition drive inorganic and organic nitrogen acquisition and internal allocation in temperate trees 季节变化而不是竞争驱动温带树木无机氮和有机氮的获取和内部分配
IF 4.7 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-08-24 DOI: 10.1016/j.envexpbot.2025.106227
Robert Reuter, Judy Simon
For trees, soil nitrogen (N) acquisition and its internal allocation to different tissues are driven by species’ properties (e.g. growth rate, nutrient demand), the interactions among tree species, and their abiotic environment. Over the growing season, abiotic changes in, e.g. temperature and rainfall affect biogeochemical N cycling as well as N allocation and remobilisation processes in trees. We studied the influence of seasonality and developmental variation in woody seedlings, focussing on tree-tree interactions. We investigated the interaction effects among seven temperate European tree species on their inorganic and organic net N uptake capacity, internal allocation of N to metabolically active and storage tissues, and morphological traits at four leaf developmental stages over the growing season (i.e. before bud break, after leaf development, before / after leaf senescence). Seedlings of seven temperate European tree species were grown in mesocosms under natural forest conditions in intra- or interspecific competition. At the beginning of the growing season, organic N was favoured over inorganic N, whereas in autumn all N sources were taken up equally. Within species, N uptake and internal allocation generally varied over the growing season, except for N acquisition in Carpinus. Among tree species, the differences in N uptake and allocation were more related to species-specific morphological and physiological root traits, rather than functional properties. The outcome of the interactions was not generally affected within a tree community over the growing season but depended on the individual species. Thus, seasonal variation and species-specific properties should be considered for mixed species forests.
对树木而言,土壤氮的获取及其在不同组织中的内部分配受树种特性(如生长速率、养分需求)、树种间相互作用及其非生物环境的驱动。在生长季节,温度和降雨等非生物变化影响树木的生物地球化学氮循环以及氮的分配和再动员过程。我们研究了季节性和发育变异对木本幼苗的影响,重点是树与树的相互作用。研究了7种温带欧洲树种在发芽前、叶片发育后、叶片衰老前后4个叶片发育阶段对其无机和有机净氮吸收能力、氮向代谢活性组织和储存组织的内部分配以及形态性状的互作效应。在自然森林条件下,以种内或种间竞争的方式在中生态环境中生长了7种温带欧洲树种的幼苗。在生长季初,有机氮比无机氮更受青睐,而在秋季,所有氮源的吸收都是相等的。在种内,除卡柏属植物的氮素获取外,其他植物的氮素吸收和内部分配随生长季节的变化而变化。不同树种间氮素吸收和分配的差异更多地与树种特有的根系形态和生理性状有关,而与功能性状无关。相互作用的结果一般不受树木群落生长季节的影响,但取决于个体物种。因此,混交林应考虑季节变化和物种特异性。
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引用次数: 0
Tissue expression pattern and regulatory function of ERD15 in response to UV-B signaling in Arabidopsis thaliana ERD15在拟南芥中响应UV-B信号的组织表达模式及调控功能
IF 4.7 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-08-23 DOI: 10.1016/j.envexpbot.2025.106226
Yuxin Xie , Man Shu , Can Yuan , Yang Fang , Wenjing Xu , Lei Feng , Hong Cai , Tiantian Xiong
Ultraviolet B band (UV-B) radiation, as an important component of the solar radiation spectrum and a key environmental factor, can regulate the expression of numerous genes and thus affects plant growth and development. Previous studies have shown that EARLY RESPONSIVE TO DEHYDRATION 15 (ERD15), acting downstream of BBX24, is known to mediate UV-B-induced hypocotyl growth inhibition, its precise regulatory function and molecular mechanisms within UV-B signaling remain unclear. In this study, we explored the tissue-specific expression patterns and regulatory roles of ERD15 in UV-B responses at the phenotypic, physiological, and transcriptional levels, revealing the regulatory network of ERD15 involvement in UV-B signaling. GUS staining revealed that UV-B radiation significantly suppressed ERD15 expression in hypocotyls and leaves, without causing obvious changes in roots. Phenotypic and physiological assessment further demonstrated that ERD15 inhibited the enhancement of leaf photosynthetic capacity under UV-B radiation. Transcriptome analysis indicated that ERD15 modulates UV-B responses through MAPK kinase, phytohormone, and antioxidant pathways, and interacts with multiple transcription factor families. Collectively, these findings elucidated the roles of ERD15 within the UV-B signaling regulatory network, and improved the current understanding of its molecular mechanisms.
紫外线B波段(UV-B)辐射作为太阳辐射光谱的重要组成部分和关键的环境因子,可以调节多种基因的表达,从而影响植物的生长发育。先前的研究表明,作用于BBX24下游的ERD15 (EARLY RESPONSIVE TO脱水15)介导了UV-B诱导的下胚轴生长抑制,但其在UV-B信号传导中的确切调控功能和分子机制尚不清楚。在本研究中,我们从表型、生理和转录水平探讨了ERD15在UV-B应答中的组织特异性表达模式和调控作用,揭示了ERD15参与UV-B信号传导的调控网络。GUS染色显示UV-B辐射显著抑制ERD15在下胚轴和叶片中的表达,而根中ERD15的表达没有明显变化。表型和生理评价进一步表明ERD15抑制UV-B辐射下叶片光合能力的增强。转录组分析表明,ERD15通过MAPK激酶、植物激素和抗氧化途径调节UV-B反应,并与多个转录因子家族相互作用。总的来说,这些发现阐明了ERD15在UV-B信号调节网络中的作用,并改进了目前对其分子机制的理解。
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引用次数: 0
Sulfonamides impede duckweed growth by inducing an excessive accumulation of salicylic acid 磺胺类药物通过诱导水杨酸的过度积累来阻碍浮萍的生长
IF 4.7 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-08-22 DOI: 10.1016/j.envexpbot.2025.106224
Aolin Ma, Siqi Liu, Zhixuan Du, Longfei Zhu, Guanping Feng
Sulfonamides, owing to their therapeutic properties and cost-effectiveness, are widely employed in clinical settings and the animal husbandry industry. However, the misuse of these compounds has resulted in severe water pollution, thereby posing significant threats to the growth and development of aquatic plants such as duckweed. Our controlled experiments revealed that sulfonamide exposure disrupts the plasma membrane integrity in duckweed root tip cortex cells and inhibits the root growth. Utilizing ESI-HPLC-MS/MS, we identified that sulfonamide exposure elicits an immune response in duckweed, characterized by the generation of substantial amounts of salicylic acid (SA). The exogenous application of SA exacerbated the sulfonamide-induced growth inhibition, whereas the addition of the SA synthesis inhibitor 1-aminobenzotriazole (ABT) mitigated the stress induced by sulfonamides. A loss-of-function mutant of ICS1, a key enzyme in the SA biosynthesis pathway, exhibited complete insensitivity to sulfonamide exposure. Furthermore, transcription factors SARD1 and CBP60g, which regulate ICS1 gene expression, were induced by sulfonamides, and their double mutant showed insensitivity to sulfonamide exposure. Reactive oxygen species (ROS) detection indicated abnormal accumulation of ROS in duckweed roots under sulfonamide exposure, which is likely to induce SA synthesis. These findings suggest that sulfonamide-mediated growth inhibition in plants is dependent on the ICS1-catalyzed SA biosynthesis pathway, thereby enhancing our understanding of the effects and mechanisms of sulfonamide exposure on aquatic plants.
磺胺类药物由于其治疗特性和成本效益,被广泛应用于临床环境和畜牧业。然而,这些化合物的滥用造成了严重的水污染,从而对浮萍等水生植物的生长发育构成了重大威胁。我们的对照实验表明,磺胺暴露破坏了浮萍根尖皮层细胞的质膜完整性,抑制了浮萍根的生长。利用ESI-HPLC-MS/MS,我们发现磺胺暴露引起浮萍的免疫反应,其特征是产生大量的水杨酸(SA)。外源施用SA加剧了磺胺诱导的生长抑制,而添加SA合成抑制剂1-氨基苯并三唑(ABT)则减轻了磺胺诱导的胁迫。SA生物合成途径的关键酶ICS1的功能缺失突变体对磺胺暴露表现出完全不敏感。此外,调节ICS1基因表达的转录因子SARD1和CBP60g被磺胺类药物诱导,它们的双突变体对磺胺暴露不敏感。活性氧(Reactive oxygen species, ROS)检测表明,磺胺暴露下浮萍根部ROS异常积累,可能是诱导SA合成的原因。这些发现表明,磺胺介导的植物生长抑制依赖于ics1催化的SA生物合成途径,从而增强了我们对磺胺暴露对水生植物的影响和机制的理解。
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引用次数: 0
Nitrogen fertilization modulates the endophytic bacteria of Aconitum carmichaelii Debx. and the quality of medicinal materials 氮肥对乌头内生细菌的调节作用。以及药材的质量
IF 4.7 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-08-21 DOI: 10.1016/j.envexpbot.2025.106223
Yichuan Liang , Hongji Hou , Guangfei Wei , Yujia Fu , Qian Wang , Tianwei Su , Lan Zou , Jing Huang
Aconitum carmichaelii Debx. is a traditional medicinal plant with substantial economic value. Prolonged use of chemical fertilizers or high nitrogen (N) input may reduce the accumulation of pharmacodynamic compounds and adversely influence ecosystems. Although the impact of N fertilization on soil microorganisms has been extensively investigated, how N fertilization modulates the endophytic bacterial community and thus affects secondary metabolite accumulation in the host plant remains unclear. This study hypothesizes that moderate nitrogen fertilization enhances alkaloid accumulation by modulating endophytic bacterial communities, thereby altering plant metabolic pathways. The field experiment demonstrated that moderate N fertilization (N2: 350 kg N ha⁻¹) significantly increased the total alkaloid content in A. carmichaelii by 14.45 % (P < 0.05) compared with that in the zero N control. High-throughput 16S rRNA gene sequencing indicated that moderate N fertilization significantly increased the diversity (Chao 1 and Shannon index, P < 0.05) and altered the community composition (R² = 0.5081, P = 0.001) of endophytic bacteria. 64 endophytic bacterial taxa were identified differentially abundant taxa varying N treatments. Among them, 20 belonged to the N2 group, 16 of which demonstrated a strong positive correlation with alkaloid contents. Subsequent experiments confirmed that Bacillus subtilis JY-7–2L significantly enhanced alkaloid accumulation in A. carmichaelii (P < 0.05) by producing alkaloids and inducing host metabolic pathways. Further analysis revealed that the metabolites from B. subtilis JY-7–2L remarkably up-regulated the genes related to signal transduction and alkaloid biosynthesis, thereby enhancing alkaloid accumulation in A. carmichaelii. This study demonstrated that rational fertilization significantly enhances plant–microbe interactions, particularly through the role of B. subtilis JY-7–2L in promoting alkaloid accumulation. These findings laid the foundation for optimizing the N fertilization strategy for A. carmichaelii cultivation and developing B. subtilis JY-7–2L strain into environmentally friendly biofertilizers to advance agricultural sustainability.
乌头草。是一种具有重要经济价值的传统药用植物。长期使用化肥或高氮投入可减少药效学化合物的积累,并对生态系统产生不利影响。虽然氮肥对土壤微生物的影响已被广泛研究,但氮肥如何调节内生细菌群落,从而影响寄主植物次生代谢物的积累尚不清楚。本研究假设适度施氮通过调节内生细菌群落从而改变植物代谢途径来促进生物碱积累。田间试验结果表明,适度施氮(N2: 350 kg N ha⁻¹)可显著提高黄颡鱼总生物碱含量14.45 % (P <; 0.05)。高通量16S rRNA基因测序结果表明,适度施氮显著提高了内生细菌多样性(Chao 1和Shannon指数,P <; 0.05),改变了内生细菌群落组成(R²= 0.5081,P = 0.001)。在不同的氮处理下,共鉴定出64个内生细菌类群。其中N2组20个,其中16个与生物碱含量呈正相关。后续实验证实枯草芽孢杆菌JY-7-2L通过产生生物碱并诱导宿主代谢途径,显著增强了A. carmichaelii生物碱的积累(P <; 0.05)。进一步分析发现,枯草芽孢杆菌JY-7-2L代谢产物显著上调了与信号转导和生物碱合成相关的基因,从而促进了A. carmichaelii生物碱的积累。本研究表明,合理施肥可显著增强植物与微生物的相互作用,特别是通过枯草芽孢杆菌JY-7-2L促进生物碱积累的作用。这些研究结果为优化A. carmichaelii栽培的氮肥施肥策略,将枯草芽孢杆菌JY-7-2L菌株开发为环境友好型生物肥料,促进农业可持续发展奠定了基础。
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引用次数: 0
In situ chemical imaging shows differential element mobilization in the rhizosphere of the Ni hyperaccumulator Odontarrhena chalcidica 原位化学成像显示了镍超富集植物黄芩根际的不同元素动员
IF 4.7 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-08-21 DOI: 10.1016/j.envexpbot.2025.106221
Alice Tognacchini , Markus Puschenreiter , Thomas Prohaska , Stefan Wagner
Nickel (Ni) hyperaccumulating plants can accumulate Ni in their aboveground biomass at mass fractions exceeding 1000 μg g−1 (dry weight). However, the processes controlling the acquisition of soil-borne Ni by hyperaccumulators remain poorly understood, particularly in relation to root-induced changes of rhizosphere chemistry. Using in situ, high-resolution chemical imaging via planar optodes and diffusive gradients in thin-films (DGT) combined with laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS), this study investigated localized changes in the spatial distribution of pH along with Ni, iron (Fe), zinc (Zn), and phosphorus (P) availability in the rhizosphere of the Ni hyperaccumulator Odontarrhena chalcidica grown on two ultramafic soils differing in pH (5.9 vs. 6.5) as well as total (552 vs. 1465 mg kg−1) and extractable (42 vs. 158 mg kg−1) Ni. Significant rhizosphere alkalinization of up to 1.5 pH units was observed at the immediate root surface in both soils, indicating root exudation of alkaline compounds. While Ni, Fe, and P fluxes were generally depleted around roots, increased Ni fluxes were observed only at root tips in the lower-Ni soil, highlighting a distinct biogeochemical niche for Ni mobilization. In contrast, increased Zn fluxes were observed consistently, irrespective of the soil or root type, revealing a previously unrecognized process for enhanced Zn availability in the rhizosphere. These findings suggest that O. chalcidica employs a highly selective rhizosphere modification strategy, combining pH shifts with element-specific mobilization mechanisms to control trace element availability and plant uptake.
超富集镍(Ni)植物在其地上生物量中积累的Ni质量分数超过1000 μg g−1(干重)。然而,控制超积累体获取土载Ni的过程仍然知之甚少,特别是与根诱导的根际化学变化有关。本研究利用平面光电器件和薄膜扩散梯度(DGT)的原位高分辨率化学成像技术,结合激光烧蚀电感耦合等离子体质谱(LA-ICP-MS),研究了pH随Ni、铁(Fe)、锌(Zn)、在pH值(5.9 vs. 6.5)、总Ni含量(552 vs. 1465 mg kg−1)和可提取Ni含量(42 vs. 158 mg kg−1)不同的两种超碱性土壤上生长的镍超富集植物牙根际磷(P)有效性。在两种土壤的根表面均观察到显著的根际碱化,pH值高达1.5 ,表明根渗出碱性化合物。在低镍土壤中,镍、铁和磷的通量通常在根部周围被耗尽,而镍通量的增加仅在根尖处被观察到,这突出了镍动员的独特生物地球化学生态位。相比之下,无论土壤或根类型如何,都观察到锌通量的增加,这揭示了一个以前未被认识到的根际锌有效性增强的过程。这些结果表明,石孢采用高度选择性的根际修饰策略,结合pH值变化和元素特异性动员机制来控制微量元素的有效性和植物吸收。
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引用次数: 0
From the shoot to the rhizosphere: The short-term cascade impact of aerial microplastic 从茎部到根际:空中微塑料的短期级联影响
IF 4.7 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2025-08-21 DOI: 10.1016/j.envexpbot.2025.106222
Oussama Bouaicha , Fabio Trevisan , Raphael Tiziani , Martin Brenner , Wolfram Weckwerth , Elisabetta Onelli , Alessandra Moscatelli , Tanja Mimmo , Luigimaria Borruso
We hypothesized that foliar exposure to polyethylene microspheres (PEMS) in tomato plants (Solanum lycopersicum L.) triggers a cascade of physiological responses in leaves that ultimately reshape the root metabolome and exudate composition, thereby modulating the root-associated microbiome. Tomato plants were grown in soil and hydroponics. Leaves were sprayed with PEMS (10–100–1000 mg L−1) or water (Control), avoiding direct contact with the growing media. After 31 days, biomass, SPAD, root metabolome, and rhizosphere microbial communities in soil-grown plants and exudome in hydroponic were assessed; root metabolome and exudates were analyzed via GC-MS, and rhizosphere communities via DNA metabarcoding. Additionally, shoots and roots were examined using transmission electron microscopy. Foliar PEMS exposure increased shoot and root biomass and SPAD index in the early days post-treatments, while reducing shoot water content, likely due to PEMS-induced ultrastructural cellular damage. In roots, PEMS significantly reduced the concentrations of several key metabolites, including serine, tryptophan, 5,6-dihydrouracil, lactic acid, tartaric acid, palmitic acid, and stearic acid. Root exudates also showed declines in isoleucine, malic, succinic, citric, aspartic, gluconic, and threonic acids. These changes significantly altered rhizobacterial alpha and beta diversity, notably enriching taxa linked to plant growth-promoting rhizobacteria (PGPR) functions. In contrast, fungal communities were unaffected, indicating lower responsiveness to short-term root exudate shifts. This underscores the short-term substantial impact of airborne microplastics on plant–rhizosphere system functioning. Overall, the aerial microplastics rapidly propagate effects from foliage to roots, altering belowground chemistry and selectively reshaping microbial communities, with potential consequences for nutrient cycling, plant health, and ecosystem resilience.
我们假设,番茄植物叶片暴露于聚乙烯微球(PEMS)会引发叶片的一系列生理反应,最终重塑根代谢组和分泌物组成,从而调节根相关微生物组。番茄植株在土壤和水培中生长。叶片喷洒PEMS(10-100-1000 mg L−1)或水(对照),避免与生长介质直接接触。31 d后,测定土栽植物和水培植物的生物量、SPAD、根代谢组和根际微生物群落;通过GC-MS分析根代谢组和分泌物,通过DNA元条形码分析根际群落。此外,用透射电子显微镜检查了芽和根。叶片暴露在PEMS处理后早期增加了茎部和根系生物量和SPAD指数,同时降低了茎部含水量,这可能是由于PEMS诱导的超微结构细胞损伤。在根中,PEMS显著降低了几种关键代谢物的浓度,包括丝氨酸、色氨酸、5,6-二氢尿嘧啶、乳酸、酒石酸、棕榈酸和硬脂酸。根系分泌物中异亮氨酸、苹果酸、琥珀酸、柠檬酸、天冬氨酸、葡萄糖酸和苏氨酸含量也有所下降。这些变化显著改变了根细菌的α和β多样性,特别是丰富了与植物生长促进根细菌(PGPR)功能相关的分类群。相比之下,真菌群落不受影响,表明对短期根系分泌物变化的响应较低。这强调了空气中微塑料对植物根际系统功能的短期实质性影响。总体而言,空气中的微塑料迅速将影响从叶子传播到根,改变地下化学物质并选择性地重塑微生物群落,对养分循环、植物健康和生态系统恢复能力产生潜在影响。
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引用次数: 0
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Environmental and Experimental Botany
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