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Succulence and aquaporin expression during drought and recovery in the CAM epiphytic bromeliad Acanthostachys strobilacea (Schult. & Schult.f.) Klotzsch CAM附生凤梨Acanthostachys strobilacea (Schult. & Schult.f.) Klotzsch在干旱和恢复期间的萌发和水气素表达
IF 4.5 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2024-09-25 DOI: 10.1016/j.envexpbot.2024.105985
Victória Carvalho , Evandro Alves Vieira , Kleber Resende Silva , Eduardo Purgatto , Catarina Carvalho Nievola , Marília Gaspar
Due to climate change, drought-rewatering cycles might become more intense and frequent, potentially threatening epiphytic bromeliads as they are detached from the soil. Hence, research on drought-rewatering responses is essential to determine the resilience of these species to projected future environmental conditions. The tankless, CAM epiphytic bromeliad Acanthostachys strobilacea shows significant drought tolerance from its early developmental stages. Here, we investigated water storage remobilization and the expression of aquaporin genes in the succulent leaf tissues of juvenile A. strobilacea plants in response to a drought-rewatering cycle and their relation to metabolic status. Under greenhouse conditions, 3-month-old plants were subjected to 14 days without irrigation, followed by 1 day of rewatering. We conducted analyses of water status, leaf anatomy, photosynthetic rates, titratable acidity, metabolic profile, and aquaporin gene expression. Data on water status indicated drought-induced turgor loss, which could be mainly attributed to the collapse of the hydrenchyma (water-storage tissue). The water stored in these cells likely relocated to the photosynthetically active cells of the chlorenchyma, which may have helped maintain metabolic activity. Indeed, titratable acidity, gas exchange, and metabolic data showed intensified CAM activity after drought. Drought also increased proline and antioxidant contents but significantly reduced the expression of AsPIP1;1, AsPIP1;2-like, AsTIP2;2 and AsNIP2;2 genes. After 1 day of rewatering, turgor, CAM activity, and the expression of most aquaporin genes and most metabolite contents were fully restored to control levels. The rapid turgor recovery, even in the absence of leaf water-absorbing trichomes, was due to water storage in hydrenchyma cells upon rehydration. Additionally, the modulation of aquaporin expression likely reduced water loss during drought and aided turgor restoration after rewatering. These results can guide future research on the responses of epiphytic bromeliads to climate change, essential to developing conservation strategies.
由于气候变化,干旱-抽水周期可能会变得更加剧烈和频繁,从而对脱离土壤的附生凤梨造成潜在威胁。因此,对干旱-反水反应的研究对于确定这些物种对未来环境条件的适应能力至关重要。无水箱、CAM附生凤梨Acanthostachys strobilacea在其早期发育阶段就表现出明显的耐旱性。在此,我们研究了石莲花幼株肉质叶组织在干旱-再浇水循环中的储水再动员和水蒸素基因的表达及其与代谢状态的关系。在温室条件下,3 个月大的植株在没有灌溉的情况下生长了 14 天,然后重新灌溉 1 天。我们对水分状况、叶片解剖结构、光合速率、可滴定酸度、新陈代谢状况和水气素基因表达进行了分析。有关水分状态的数据表明,干旱会导致水分流失,这主要是由于水分沟(储水组织)塌陷造成的。这些细胞中储存的水分可能转移到了具有光合作用的脉络膜细胞中,这可能有助于维持新陈代谢活动。事实上,可滴定酸度、气体交换和新陈代谢数据都表明,干旱后 CAM 的活性增强了。干旱还增加了脯氨酸和抗氧化剂的含量,但显著降低了 AsPIP1;1、AsPIP1;2-like、AsTIP2;2 和 AsNIP2;2 基因的表达。重新浇水 1 天后,水分、CAM 活性、大多数水蒸气素基因的表达和大多数代谢物的含量完全恢复到对照水平。即使在没有叶片吸水毛状体的情况下,水分也能迅速恢复,这是因为补水后水分储存在水沟细胞中。此外,调节水蒸发蛋白的表达可能减少了干旱期间的水分损失,并有助于重新灌水后的水分恢复。这些结果可以指导未来关于附生凤梨对气候变化的反应的研究,对制定保护策略至关重要。
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引用次数: 0
Leaf gas exchange responses to combined heat and drought stress in wheat genotypes with varied stomatal density 气孔密度不同的小麦基因型对热和干旱联合胁迫的叶气体交换反应
IF 4.5 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2024-09-24 DOI: 10.1016/j.envexpbot.2024.105984
Theresa Pflüger, Signe M. Jensen, Fulai Liu, Eva Rosenqvist
Stomata regulate the plant’s gas exchange and water balance, and their density may be a crucial factor in the response to abiotic stresses. The aim of this study was to investigate the response of leaf gas exchange of three spring wheat genotypes with different stomatal density to progressive drought and combined heat and drought stress. The stomatal conductance (gs) was the most sensitive parameter that declined with increasing drought stress. This negatively affected transpiration and leaf cooling, and limited photosynthesis (A) when gs decreased to < 550 mmol m−2 s−1. The treatments affected all three genotypes similarly over time irrespective of stomatal density. However, when related to the fraction of transpirable soil water (FTSW) in the pot, gs and A of the low and high stomatal density cultivars responded differently when heat was added to the drought stress. The high stomatal density cultivar showed no difference in maximum gs at FTSW > 0.3, and a similar decline of gs and A at FTSW < 0.3 in drought alone and combined drought and heat. The low stomatal density cultivar showed a higher maximum gs and the most severe decline of gs under combined heat and drought stress and a significantly slower decline of gs under drought alone, which was also reflected in a significantly slower reduction in A under drought compared to the combined stress. Overall, the drought response of stomatal closure dominated the physiological response under simultaneous heat and drought irrespective of stomatal density, and it was only in the combined stress that the maximum photochemical efficiency Fv/Fm was negatively affected. In conclusion, to elucidate the effect of drought and combined drought and heat on the leaf gas exchange in wheat cultivars with varied stomatal density, it is crucial to relate the parameters to the available soil water, not the duration of the drought.
气孔调节植物的气体交换和水分平衡,其密度可能是非生物胁迫响应的关键因素。本研究的目的是研究三种气孔密度不同的春小麦基因型的叶片气体交换对渐进干旱和热旱联合胁迫的响应。气孔导度(gs)是最敏感的参数,随着干旱胁迫的加剧而下降。这对蒸腾作用和叶片冷却产生了负面影响,并在 gs 下降到 550 mmol m-2 s-1 时限制了光合作用(A)。随着时间的推移,处理对三种基因型的影响相似,与气孔密度无关。然而,当干旱胁迫中加入热量时,如果与盆中可渗透土壤水分(FTSW)有关,气孔密度低和气孔密度高的栽培品种的 gs 和 A 反应不同。高气孔密度栽培品种在 FTSW > 0.3 时的最大 gs 没有差异,而在 FTSW < 0.3 时,在单独干旱和干旱与高温共同胁迫下,gs 和 A 的降幅相似。低气孔密度栽培品种在高温和干旱联合胁迫下表现出更高的最大气孔密度和最严重的气孔密度下降,而在单独干旱胁迫下气孔密度下降速度明显较慢,这也反映在干旱胁迫下A的下降速度明显慢于联合胁迫。总体而言,无论气孔密度如何,气孔关闭的干旱响应在高温和干旱同时胁迫下的生理响应中占主导地位,只有在联合胁迫下,最大光化学效率 Fv/Fm 才会受到负面影响。总之,要阐明干旱以及旱热并存对不同气孔密度小麦品种叶片气体交换的影响,关键是要将参数与可用土壤水而不是干旱持续时间联系起来。
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引用次数: 0
Genome-wide analysis of two repeats containing MYB transcription factors in groundnut identifies drought-inducible genes involved as a negative regulator of root nodulation 对花生中含有 MYB 转录因子的两个重复序列进行全基因组分析,确定了作为根瘤负调控因子参与其中的干旱诱导基因
IF 4.5 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2024-09-19 DOI: 10.1016/j.envexpbot.2024.105981
Abhilasha Abhilasha , Akancha Shukla , Lakhani Amiben, Swarup Roy Choudhury
The MYB gene superfamily encompasses a group of related genes found in all eukaryotes. In contrast to animals, higher plants contain large numbers of two-repeat MYB genes, which have been established in regulating crucial developmental, biotic, and abiotic stress responses that profoundly affect the plant's yield. However, a comprehensive analysis of the two-repeat MYB gene family in groundnut and its progenitors, especially the role of two-repeat MYB genes in response to drought stress, and the effect of those genes in nodulation have not been reported so far. Our recent analysis of the groundnut genome has identified 79 (Arachis duranensis), 84 (Arachis ipaensis), and 161 (Arachis hypogaea) two-repeat MYB genes, which belong to multiple distinct subgroups based on their architecture. Here, we provided a complete overview of the gene structure, protein motif organization, chromosome localization, gene duplication events, and synteny analysis to clarify evolutionary perspectives. Members of the same subgroup showed highly conserved structure and motif compositions. The whole-genome duplication and segmental duplication likely contributed to the expansion of two-repeat MYB genes in Arachis hypogaea. The upstream sequences of most genes contained phytohormone-responsive, stress-responsive, light-responsive, and plant growth-related elements. The genes not only have diverse expression profiles across different development stages but as shown in our experimental findings, most of them were induced by ABA and drought-related stress. Further gene silencing experiments demonstrated that two drought-inducible MYB genes, homologs of Arabidopsis MYB96 and MYB94, function as a negative regulator of root nodulation. The results of this study can serve as a strong foundation for further elucidation of the physiological and molecular function of two-repeat MYB genes in groundnut.
MYB 基因超家族包括一组存在于所有真核生物中的相关基因。与动物不同,高等植物中含有大量的双重复 MYB 基因,这些基因在调控重要的发育、生物和非生物胁迫反应方面已经得到证实,这些反应对植物的产量有着深远的影响。然而,关于花生及其祖先的双重复 MYB 基因家族的全面分析,特别是双重复 MYB 基因在干旱胁迫响应中的作用以及这些基因在结瘤中的影响,迄今尚未见报道。我们最近对落花生基因组的分析发现了 79 个(Arachis duranensis)、84 个(Arachis ipaensis)和 161 个(Arachis hypogaea)双重复 MYB 基因,这些基因根据其结构属于多个不同的亚群。在此,我们对这些基因的结构、蛋白基序组织、染色体定位、基因重复事件和同源关系分析进行了全面概述,以阐明其进化前景。同一亚群的成员表现出高度保守的结构和主题组成。全基因组复制和节段复制可能是双重复MYB基因在Arachis hypogaea中扩增的原因。大多数基因的上游序列包含植物激素响应、胁迫响应、光响应和植物生长相关元件。这些基因不仅在不同的生长发育阶段有不同的表达谱,而且正如我们的实验结果所显示的那样,它们中的大多数都受到 ABA 和干旱相关胁迫的诱导。进一步的基因沉默实验表明,两个干旱诱导的 MYB 基因(拟南芥 MYB96 和 MYB94 的同源基因)是根瘤的负调控因子。本研究的结果为进一步阐明花生中两个重复的 MYB 基因的生理和分子功能奠定了坚实的基础。
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引用次数: 0
Major abiotic stresses on quality parameters in grain legumes: Impacts and various strategies for improving quality traits 主要非生物胁迫对谷物豆类品质参数的影响:影响和改善品质性状的各种策略
IF 4.5 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2024-09-10 DOI: 10.1016/j.envexpbot.2024.105978
Uday Chand Jha , Manu Priya , Yogesh Dashrath Naik , Harsh Nayyar , Mahendar Thudi , Somashekhar M. Punnuri , Kadambot H.M. Siddique , P.V. Vara Prasad
Abiotic stresses, such as drought, heat, salinity, waterlogging, tropospheric ozone, and heavy metals, adversely affect crop growth and yield, posing significant challenges to crop production, including grain legumes. With global climate change likely to exacerbate these stresses, legume yields are becoming increasingly vulnerable. While the detrimental effects of these stresses on crop yield are well-documented, their impact on quality traits in grain legumes is less recognized. Abiotic stresses can alter grain carbohydrates, proteins, fats/lipids, amino acids, sugar content, various micronutrients, food value, and antioxidants, significantly impairing quality traits. This review summarizes the negative impacts of various abiotic stresses on the quality parameters of different grain legumes and explores crop breeding strategies, plant physiology, genomics, and novel molecular tools to mitigate these adverse effects.
干旱、高温、盐碱、水涝、对流层臭氧和重金属等非生物胁迫对作物的生长和产量产生不利影响,给包括谷物豆类在内的作物生产带来重大挑战。随着全球气候变化可能加剧这些压力,豆科植物的产量正变得越来越脆弱。虽然这些胁迫对作物产量的不利影响已得到充分证实,但它们对谷物豆类品质特征的影响却鲜为人知。非生物胁迫会改变谷物的碳水化合物、蛋白质、脂肪/脂类、氨基酸、糖含量、各种微量营养素、食用价值和抗氧化剂,严重损害品质性状。本综述总结了各种非生物胁迫对不同豆科谷物品质参数的负面影响,并探讨了作物育种策略、植物生理学、基因组学和新型分子工具,以减轻这些不利影响。
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引用次数: 0
Genome-wide identification and expression analysis of CmoADHs in Cucurbita moschata—Critical role of CmoADH9 in drought tolerance 葫芦中 CmoADHs 的全基因组鉴定和表达分析--CmoADH9 在抗旱中的关键作用
IF 4.5 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2024-09-07 DOI: 10.1016/j.envexpbot.2024.105967
Qingfei Li , Zhengxiang Liu , Peiwen Chen , Yuanyuan Han , Xuejin Chen , Xinzheng Li

In plants, alcohol dehydrogenases (ADHs) are involved in stress response, organ development, fruit ripening, and metabolite synthesis. However, little is known regarding ADH-encoding genes (ADHs) in Cucurbita moschata which is usually used as a rootstock for cucumber, melon, watermelon, and other cucurbit crops to resist soil-borne diseases and abiotic stresses. We identified 11 CmoADHs in the C. moschata genome that were unevenly distributed across seven chromosomes. These genes were predicted to encode stable cytoplasmic acidic proteins, sharing a low degree of identity with each other. The genes exhibited different intron–exon structures. Analysis of cis-acting regulatory elements showed that CmoADHs contain environmental stress-, hormone response-, light response-, and development/tissue specificity-related elements in their promoters. Expression pattern analysis revealed that CmoADH2, CmoADH3, CmoADH4, CmoADH9, CmoADH10, and CmoADH11 had the highest expression levels in the roots, which were significantly higher than those in the other tested tissues. These six genes may play important roles in the growth and development of roots, and in related abiotic stress responses. CmoADH1, CmoADH5, CmoADH6, CmoADH7, CmoADH8 had the highest expression in the apical region and could be involved in the differentiation of newly formed tissues. To study the role of CmoADHs in abiotic stress, salt, drought, low temperature, and ethephon treatments were performed. Under drought conditions, CmoADHs showed different expression trends. The expression levels of CmoADH1, CmoADH2, CmoADH3, and CmoADH9 increased significantly and peaked after 1 h of drought treatment, indicating that these four genes are more sensitive to drought stress. Under salt treatment, all CmoADHs showed a significant increase or decrease in expression within 6 h, except for CmoADH5 and CmoADH10, which were insensitive to salt treatment. The expression of most of the CmoADHs was significantly downregulated by low-temperature treatment. Ethephon treatment significantly induced the expression of all the CmoADHs, except CmoADH2, to different degrees within 12 h. CmoADH9 was found to be involved in root growth and drought stress resistance. Identification of these ADH genes can provide useful resources for conferring stress resistance in other economically important crops.

在植物中,醇脱氢酶(ADHs)参与胁迫反应、器官发育、果实成熟和代谢物合成。然而,人们对葫芦(Cucurbita moschata)中的乙醇脱氢酶编码基因(ADHs)知之甚少。葫芦通常被用作黄瓜、甜瓜、西瓜和其他葫芦科作物的砧木,以抵抗土传疾病和非生物胁迫。我们在 C. moschata 基因组中发现了 11 个 CmoADHs,它们不均匀地分布在 7 条染色体上。据预测,这些基因编码稳定的细胞质酸性蛋白,彼此之间的同源性较低。这些基因表现出不同的内含子-外显子结构。对顺式调控元件的分析表明,CmoADHs 的启动子中含有环境胁迫、激素反应、光反应和发育/组织特异性相关元件。表达模式分析显示,CmoADH2、CmoADH3、CmoADH4、CmoADH9、CmoADH10和CmoADH11在根部的表达水平最高,明显高于其他受试组织。这六个基因可能在根的生长发育以及相关的非生物胁迫反应中发挥重要作用。CmoADH1、CmoADH5、CmoADH6、CmoADH7和CmoADH8在根尖区的表达量最高,可能参与了新形成组织的分化。为了研究 CmoADHs 在非生物胁迫中的作用,对其进行了盐渍、干旱、低温和乙硫磷处理。在干旱条件下,CmoADHs表现出不同的表达趋势。CmoADH1、CmoADH2、CmoADH3和CmoADH9的表达量在干旱处理1 h后显著增加并达到峰值,表明这四个基因对干旱胁迫更为敏感。在盐处理条件下,除CmoADH5和CmoADH10对盐处理不敏感外,其他CmoADHs的表达量在6 h内均有明显的增减。大多数 CmoADHs 的表达在低温处理后明显下调。除 CmoADH2 外,乙硫磷处理可在 12 小时内不同程度地诱导所有 CmoADHs 的表达。研究发现,CmoADH9参与根系生长和抗旱胁迫。这些 ADH 基因的鉴定可为其他重要经济作物的抗逆性提供有用的资源。
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引用次数: 0
Phenotypic plasticity of water-related traits reveals boundaries to the adaptive capacity of a dominant European grass species under increased drought 与水有关的特征的表型可塑性揭示了欧洲优势草种在干旱加剧情况下的适应能力边界
IF 4.5 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2024-09-07 DOI: 10.1016/j.envexpbot.2024.105970
Gerónimo Agustín Cardozo , Karim Barkaoui , Maria Dolores Hidalgo-Galvez , Florence Volaire

The intensification of droughts due to climate change is a global concern, and many plant species face increasing water deficits. Understanding the role of phenotypic plasticity in plant adaptation to these changing conditions is crucial. This research focuses on Bromopsis erecta, a dominant perennial grass in European and Mediterranean grasslands, to predict its potential adaptation to climate change. We assessed plants from shallow and deep soils (i.e., with contrasting water reserves) of a Mediterranean rangeland in southern France, and tested the effect of six years of experimentally increased summer drought compared to the ambient conditions on plant traits, survival and abundance. In both field and common garden experiments, we measured water-related traits, including static traits under non-limiting water conditions, and dynamic traits, such as rates of trait variation during drought. Trait plasticity was determined as a reaction norm to increasing soil water stress and was tested against changes in B. erecta abundance over the past decade, including the study period. Trait plasticity was detected only for leaf dry matter content (LDMC), revealing that the resource strategy of B. erecta became more conservative over less than a decade with higher LDMC and leaf thickness according to the plant economic spectrum. No plasticity was found for osmotic potential or specific leaf area. The variability of other traits was ascribed to the possible lagging effect of previous water stress and was associated more with soil depth than with previous summer drought intensity. The abundance decline of B. erecta, which dropped from 20 % to around 5 % in shallow soils, was not associated with the plasticity of LDMC but was positively correlated with variations in leaf base membrane damage, meaning unexpectedly, that plants exposed to the most severe summer drought also had the most sensitive leaf base membranes, a possible sign of maladaptive trait plasticity in the population. This key trait response reveals boundaries to the adaptive capacity of this perennial grass to survive pluri-annual drought.

气候变化导致的干旱加剧是全球关注的问题,许多植物物种面临着日益严重的缺水问题。了解表型可塑性在植物适应这些变化条件中的作用至关重要。本研究以欧洲和地中海草原上的主要多年生禾本科植物 Bromopsis erecta 为研究对象,预测其对气候变化的潜在适应性。我们评估了来自法国南部地中海牧场浅层和深层土壤(即具有不同储水量的土壤)的植物,并测试了与环境条件相比,试验性增加夏季干旱六年对植物性状、存活率和丰度的影响。在田间和普通花园实验中,我们测量了与水有关的性状,包括非限制性水分条件下的静态性状和动态性状,如干旱期间的性状变异率。性状可塑性被确定为对土壤水分压力增加的反应标准,并根据直立榕在过去十年(包括研究期间)的丰度变化进行了测试。仅在叶干物质含量(LDMC)方面发现了性状可塑性,表明在不到十年的时间里,直立穗花草的资源战略变得更加保守,根据植物经济光谱,叶干物质含量和叶片厚度更高。在渗透势和特定叶面积方面没有发现可塑性。其他性状的可变性可能是由于之前水分胁迫的滞后效应造成的,与土壤深度的关系比与之前夏季干旱强度的关系更大。直立茎的丰度下降(在浅层土壤中从 20% 降至 5%左右)与 LDMC 的可塑性无关,但与叶基膜损伤的变化呈正相关,这意味着暴露于最严重夏季干旱的植物也具有最敏感的叶基膜,这出乎意料,这可能是种群中适应不良性状可塑性的一个迹象。这种关键的性状反应揭示了这种多年生禾本科植物在多年干旱中生存的适应能力的边界。
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引用次数: 0
Genome-wide characterization of the Late Embryogenesis Abundant (LEA) gene family in Ammopiptanthus nanus and overexpression of AnLEA30 enhanced abiotic stress tolerance in tobacco 烟草胚胎发生晚期富集(LEA)基因家族的全基因组特征及 AnLEA30 的过表达增强了烟草的非生物胁迫耐受性
IF 4.5 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2024-09-06 DOI: 10.1016/j.envexpbot.2024.105969
Yanjing Liu, Wanli Shi, Kuo Dong, Xueqi Zhao, Yuzhen Chen, Cunfu Lu

Late embryogenesis abundant (LEA) proteins play a crucial role in determining how plants respond to abiotic stress. Nonetheless, the comprehensive characterization and function of the LEA gene family in Ammopiptanthus nanus, an endangered evergreen shrub plant that survived in harsh desert environments, are largely unknown. Through a comprehensive genome-wide investigation, we successfully identified 45 AnLEA genes in A. nanus and divided them into eight groups. AnLEAs have typical LEA domains, and the promoter analysis shows that they contain various cis-regulatory elements related to stress resistance. The diverse expression patterns of AnLEAs under different abiotic stress treatments suggest that they play an important role in responding to stress. Overexpression of AnLEA30 in tobacco significantly enhanced abiotic stress tolerance by effectively stabilizing and protecting membranes, scavenging reactive oxide species (ROS), and improving photosynthesis, demonstrating the potential for application of AnLEA30 in plant improvement.

胚胎发生后期大量蛋白(LEA)在决定植物如何应对非生物胁迫方面起着至关重要的作用。然而,对于在严酷沙漠环境中生存的濒危常绿灌木植物 Ammopiptanthus nanus 中 LEA 基因家族的全面特征和功能,我们还知之甚少。通过全面的全基因组调查,我们成功鉴定了南天竹中的 45 个 AnLEA 基因,并将其分为 8 组。AnLEA具有典型的LEA结构域,启动子分析表明它们含有多种与抗逆性相关的顺式调控元件。在不同的非生物胁迫处理下,AnLEAs的表达模式各不相同,这表明它们在响应胁迫中发挥着重要作用。在烟草中过表达AnLEA30可有效稳定和保护膜、清除活性氧化物(ROS)和改善光合作用,从而显著增强烟草的抗逆性,这证明了AnLEA30在植物改良中的应用潜力。
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引用次数: 0
Metagenomics and metabolomics analysis revealed that Se-mediated Cd precipitation and nutrient cycling regulated soil-rice (Oryza sativa L) microenvironmental homeostasis under cadmium stress 元基因组学和代谢组学分析揭示镉胁迫下Se介导的镉沉淀和养分循环调控土壤-水稻(Oryza sativa L)的微环境稳态
IF 4.5 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2024-09-05 DOI: 10.1016/j.envexpbot.2024.105958
Sixi Zhu , Suxia Sun , Wei Zhao , Luying Sheng , Huan Mao , Xiuqin Yang , Zhongbing Chen

Exogenous selenium (Se) addition can dynamically regulate the establishment of microbial communities, induce the expression of specific microbial functional genes, and affect the homeostasis of the soil-plant microenvironment. In this study, we used metagenomic and metabolomic analyses to investigate Se-mediated homeostatic changes and functional responses in the rhizosphere soil of rice seedlings. Results show that compared with the Cd set, selenium (1 mg/kg) Se content in the Soil and rice plant increased by 88.5 % and 99.1 %, respectively. Soil-fluorescein diacetate (S-FDA) hydrolyze enzymatic activity increased by 42.9 %, Rice on Cd enrichment coefficient increased by 71.1 %, but the transfer coefficient by 21.6 %, making a lot of cadmium ion stranded in the root, easing the toxicity of cadmium to plant. Metagenomic analysis revealed that Se bioaugmentation altered the structure and composition of the rhizosphere microbial community and induced remodeling of the rice rhizosphere microbiome. Increase the heavy metal resistance genes (cznA czcD, czcP, dltC, and CREM), nutrient cycling functional genes (atoB tktB, acs, sdhA, accA, ppdK, NRT, narB, nifD, napA, pstS, GlpQ, spoT, phoR, sucC) and heavy metal transport protein family (P-ATPase, CDF, ABC, and MIT) expression. It significantly improved the health of the rhizosphere microenvironment and alleviated soil hardening and nutrient deficiency caused by heavy metals. At the same time, in metabonomics analysis, The upregulated Differentially expressed metabolites (DEMs) were mainly in the Biosynthesis of siderophore group nonribosomal peptides, Sulfur metabolism, Ubiquinone and other terpenoid-quinone Biosynthesis, Cysteine, and methionine metabolism in enrichment significantly. The mediated reshaping of rhizosphere microorganism groups indicates that there is ane an advantage in the nutrient cycle. Also, the secondary metabolism and antioxidant capacity have significantly strengthened the ed, and the large strain caused by the death of heavy metals is a result of poor Soil. In addition, the Cyclic adenosine monophosphate (CAMP) signaling pathway was activated among the remodeling microbiomes, and the receptor protein inducer was upregulated, which activated the population response among the rhizosphere microbiomes and resulted in the overexpression of specific functional genes of each microbiome. By enhancing the resistance to heavy metals and nutrient cycling ability of the rhizosphere microbiome, the mobility and bioavailability of Cd ions were significantly reduced, the rhizosphere soil microenvironment health was improved, and the adaptability of rice to Cd stress was improved. This study reveals the Se of rice rhizosphere Cd-resistant bacteria mediating mechanisms; research for precise regulation of plant rhizosphere microorganism groups opens new avenues of research and offers a new way for crop production safety.

外源硒(Se)的添加可动态调节微生物群落的建立,诱导特定微生物功能基因的表达,并影响土壤-植物微环境的稳态。本研究采用元基因组和代谢组分析方法研究了水稻幼苗根瘤土壤中Se介导的稳态变化和功能反应。结果表明,与镉组相比,土壤和水稻植株中的硒(1 毫克/千克)含量分别增加了 88.5 % 和 99.1 %。土壤-荧光素二乙酸酯(S-FDA)水解酶活性提高了 42.9%,水稻对镉的富集系数提高了 71.1%,但转移因子降低了 21.6%,使得大量镉离子滞留在根部,减轻了镉对植物的毒性。元基因组分析表明,Se 生物增殖改变了根圈微生物群落的结构和组成,诱导了水稻根圈微生物群落的重塑。增加了重金属抗性基因(cznA czcD、czcP、dltC 和 CREM)、养分循环功能基因(atoB tktB、aces、sdhA、accA、ppdK、NRT、narB、nifD、napA、pstS、GlpQ、poT、phoR、sucC)和重金属转运蛋白家族(P-ATPase、CDF、ABC 和 MIT)的表达。这极大地改善了根圈微环境的健康状况,缓解了重金属导致的土壤硬化和养分缺乏。同时,在代谢组学分析中,上调的差异表达代谢物(DEMs)主要集中在苷元组非核糖体肽的生物合成、硫代谢、泛醌和其他萜类-醌的生物合成、半胱氨酸和蛋氨酸代谢等方面。根瘤微生物群的介导重塑表明,营养循环中存在一种优势。同时,次生代谢和抗氧化能力也明显增强,重金属死亡造成的巨大应变是土壤贫瘠的结果。此外,重塑微生物群中的单磷酸环腺苷(CAMP)信号通路被激活,受体蛋白诱导剂上调,激活了根瘤微生物群的群体反应,导致各微生物群特定功能基因的过度表达。通过增强根圈微生物群对重金属的抗性和养分循环能力,显著降低了镉离子的迁移率和生物利用率,改善了根圈土壤微环境的健康状况,提高了水稻对镉胁迫的适应性。该研究揭示了水稻根瘤菌抗镉菌群的调控机制,为植物根瘤菌群的精准调控研究开辟了新的研究途径,为作物生产安全提供了新的途径。
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引用次数: 0
Transcriptional responses of durum wheat to chronic chromium exposure reveal candidate proteins involved in metal detoxification and compartmentalization 硬粒小麦对慢性铬暴露的转录反应揭示了参与金属解毒和分区的候选蛋白质
IF 4.5 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2024-09-03 DOI: 10.1016/j.envexpbot.2024.105953
Marcos Fernando Basso , Alessio Aprile , Miriam Negussu , Ilaria Colzi , Ida Pernice , Carla Lo Passo , Cristina Gonnelli , Alessandro Frontini , Luigi De Bellis , Matteo Buti , Federico Martinelli

Chromium phytotoxicity results in relevant alterations to plant physiology, gene expression, and genomic DNA methylation at a transgenerational level. Herein, transcriptional responses of durum wheat (Triticum turgidum L.) to chronic chromium exposure were explored in roots and leaves by RNA-seq approach. Plants grown all the time in a hydroponic system supplemented with 2.5 and 10 µM hexavalent chromium were compared to unstressful control plants, assessing biomass and seed yield analyses after senescence. Then, transcriptomic analysis was performed with these plants kept under 10 µM chromium 50 days after the onset of exposure. The chromium concentrations used were considered the lowest dose sufficient to alter gene expression without impeding plant development, while the sampling time reflected the effects in the pre-harvest phase and long-lasting defense mechanisms. Root and leaf samples from plants kept under 10 µM chromium stress and from unstressful control plants were analyzed, generating 12 RNA-seq libraries. In total, 965 and 810 transcripts were found to be differentially expressed, respectively, in roots and leaves in response to 10 µM chromium stress. In roots, transcriptional changes were noted in the primary and secondary metabolism, redox homeostasis, protein modification, solute transport, nutrient uptake, and external stimuli responses. Meanwhile, the transcriptional changes in leaves were primarily found in the secondary metabolism, hormone-related pathways, chromatin modifications, cell division, protein modification and homeostasis, solute transport, and nutrient uptake. In particular, the metal uptake and translocation pathways were studied with greater emphasis to identify key proteins involved in chromium transport and compartmentalization. Furthermore, several genes involved in the biosynthesis of malate-derived organic acids, trace metal transport/detoxification/chelation, and vacuolar compartmentalization were linked to primary defense responses, and some of them were also associated with two putative gene clusters. Therefore, these genes and gene clusters are suggested as valuable biotechnological targets for future proof-of-concept studies aimed at genetic engineering of durum wheat to improve plant tolerance to chromium exposure.

铬的植物毒性会导致植物生理、基因表达和基因组 DNA 甲基化在跨代水平上发生相关改变。本文通过 RNA-seq 方法探讨了硬质小麦(Triticum turgidum L.)根部和叶片对慢性铬暴露的转录反应。将一直在补充了 2.5 µM 和 10 µM 六价铬的水培系统中生长的植物与未受胁迫的对照植物进行比较,评估衰老后的生物量和种子产量分析。然后,在开始接触 10 µM 铬 50 天后,对这些植物进行转录组分析。所使用的铬浓度被认为是足以改变基因表达而不妨碍植物发育的最低剂量,而取样时间则反映了收获前阶段和持久防御机制的影响。我们分析了 10 µM 铬胁迫下的植物根部和叶片样本,以及未受胁迫的对照植物的根部和叶片样本,生成了 12 个 RNA-seq 文库。结果发现,在 10 µM 铬胁迫下,根部和叶片中分别有 965 和 810 个转录本发生了差异表达。在根部,初级和次级代谢、氧化还原平衡、蛋白质修饰、溶质转运、养分吸收和外部刺激反应等方面的转录都发生了变化。而叶片的转录变化主要出现在次生代谢、激素相关途径、染色质修饰、细胞分裂、蛋白质修饰和平衡、溶质转运和养分吸收等方面。特别是对金属吸收和转运途径进行了重点研究,以确定参与铬转运和分区的关键蛋白质。此外,参与苹果酸源有机酸生物合成、痕量金属转运/解毒/螯合和液泡分区的几个基因与初级防御反应有关,其中一些基因还与两个假定基因簇有关。因此,建议将这些基因和基因簇作为有价值的生物技术目标,用于未来的概念验证研究,旨在通过硬粒小麦的基因工程提高植物对铬暴露的耐受性。
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引用次数: 0
Proteomic analysis of MsFtsH8 overexpression reveals enhanced salt stress response in alfalfa through PSII stability and antioxidant capacity improvement 过表达 MsFtsH8 的蛋白质组分析表明,紫花苜蓿通过提高 PSII 稳定性和抗氧化能力增强了盐胁迫响应
IF 4.5 2区 生物学 Q2 ENVIRONMENTAL SCIENCES Pub Date : 2024-09-02 DOI: 10.1016/j.envexpbot.2024.105966
Xiao Li , Kuiju Niu , Xiangcui Zeng , Xiaoxi Zhu , Qianwen Yu , Junmei Kang , Qingchuan Yang , Tiejun Zhang , Ruicai Long , Mingna Li

The FtsH (Filamentous temperature sensitive H) proteases, known for their crucial roles in protein quality control and maintaining the integrity of photosynthetic machinery, have emerged as key regulators of stress responses in plants. Our previous study revealed the overexpression of MsFtsH8, an FtsH gene from alfalfa (Medicago sativa L.), confers salt stress tolerance to the plant. By comparing the proteomic profiles of MsFtsH8-overexpressing alfalfa and wild type under salt stress conditions, we elucidate the molecular pathways underlying MsFtsH8-mediated salt stress resilience. We identified 730 differentially expressed proteins (DEPs) in MsFtsH8-overexpressing alfalfa under salt stress, compared to 498 DEPs in wild type alfalfa under the same growth condition. Our results reveal significant alterations in the expression of proteins involved in the photosynthetic system, consistent with the chloroplast subcellular localization of MsFtsH8. Specifically, MsFtsH8 overexpression stabilizes key components of Photosystem II (PSII) and enhances electron transport processes, leading to increased photosynthetic efficiency and oxidative photodamage repair capacity under salt stress. Moreover, MsFtsH8-overexpressing alfalfa exhibits elevated levels of antioxidative enzymes, further mitigating oxidative damage induced by high salinity. These findings deepen our understanding of the regulatory role of MsFtsH8 in salt stress response and highlight its potential for improving crop resilience under adverse environmental conditions.

FtsH(丝状温度敏感 H)蛋白酶因其在蛋白质质量控制和维持光合作用机制完整性方面的关键作用而闻名,现已成为植物胁迫响应的关键调控因子。我们之前的研究发现,过表达紫花苜蓿(Medicago sativa L.)的 FtsH 基因 MsFtsH8 能赋予植物耐盐胁迫的能力。通过比较MsFtsH8过表达苜蓿和野生型在盐胁迫条件下的蛋白质组图谱,我们阐明了MsFtsH8介导的抗盐胁迫能力的分子通路。在盐胁迫条件下,我们在MsFtsH8高表达苜蓿中发现了730个差异表达蛋白(DEPs),而在相同生长条件下,野生型苜蓿中的差异表达蛋白只有498个。我们的研究结果表明,参与光合作用系统的蛋白质表达发生了重大变化,这与 MsFtsH8 的叶绿体亚细胞定位一致。具体来说,MsFtsH8 的过表达稳定了光系统 II(PSII)的关键组分,并增强了电子传递过程,从而提高了盐胁迫下的光合效率和氧化光损伤修复能力。此外,MsFtsH8过表达苜蓿的抗氧化酶水平升高,进一步减轻了高盐度诱导的氧化损伤。这些发现加深了我们对MsFtsH8在盐胁迫响应中调控作用的理解,并凸显了它在提高作物在不利环境条件下的抗逆性方面的潜力。
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