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The use of vermicompost from urban organic waste leads to a sustainable increase of earthworm abundance: a three-year study in a crop field converting to organic farming 使用来自城市有机废物的蚯蚓堆肥导致蚯蚓数量的可持续增长:一项为期三年的研究,在农田转为有机农业
IF 3.3 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-12-01 Epub Date: 2025-11-24 DOI: 10.1016/j.ejsobi.2025.103789
Vincent Ducasse , Vincent Tolon , Apolline Auclerc , Line Capowiez , Joséphine Peigné , Yvan Capowiez
The management of organic matter in sustainable agriculture remains challenging in the 21st century. For farms located close to large cities, the organic fraction of municipal solid waste (OFMSW) is a potential resource to improve soil biological quality. However, this fraction can be processed in very different ways: compost, digestate, or vermicompost. We carried out a three-year trial to compare the effects on earthworm communities of two successive applications of such products at two doses (except for digestate) in a field crop recently converted to organic farming and no tillage. The abandonment of tillage led to a marked increase in the soil bulk density (from 1.25 to 1.45 g cm−3) and an associated and continuous decrease in the number of juvenile earthworms in all plots. For abundance of adult earthworms, compost had no effect, whereas digestate led to a large and rapid increase immediately after each application. By contrast, vermicompost steadily increased adult earthworm abundance (+33 to + 90 % compared to the control, depending on the sampling dates). Similar results were observed for earthworm biomass. In this trial, highly dominated by endogeics (80 % of the abundance), no difference between treatments was observed for the temporal variation of each species. However, Aporrectodea caliginosa abundance greatly increased after the first application, whereas Aporrectodea icterica only increased after the second application. The impact of vermicompost on earthworm communities has never been studied under field conditions so far, but this product seems promising for farmers who may seek to benefit from the services provided by earthworms.
在21世纪,可持续农业中的有机质管理仍然具有挑战性。对于靠近大城市的农场,城市固体废物的有机部分(OFMSW)是改善土壤生物质量的潜在资源。然而,这个部分可以用非常不同的方式处理:堆肥、消化物或蚯蚓堆肥。我们进行了一项为期三年的试验,比较在一种最近转为有机耕作和免耕的大田作物上连续两次以两种剂量(除消化剂外)施用这种产品对蚯蚓群落的影响。放弃耕作导致土壤容重显著增加(从1.25 g cm−3增加到1.45 g cm−3),并导致所有样地蚯蚓幼虫数量持续减少。对于蚯蚓成虫的丰度,堆肥没有影响,而消化液在每次施用后立即导致大量快速增加。相比之下,蚯蚓堆肥稳定地增加了成年蚯蚓的丰度(与对照相比增加了33%至90%,具体取决于采样日期)。蚯蚓生物量也观察到类似的结果。在这个试验中,高度由内源生物主导(丰度的80%),在每个物种的时间变化中,没有观察到处理之间的差异。然而,在第一次施用后,绿藻的丰度显著增加,而黄藻的丰度仅在第二次施用后增加。迄今为止,蚯蚓堆肥对蚯蚓群落的影响从未在实地条件下进行过研究,但这种产品似乎对那些可能寻求从蚯蚓提供的服务中受益的农民很有希望。
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引用次数: 0
Leaf litter quantity shapes oribatid mite assemblages five years following forestry interventions in a European deciduous forest 凋落叶数量在森林干预后的五年内对欧洲落叶林中的甲螨组合的影响
IF 3.3 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-12-01 Epub Date: 2025-11-29 DOI: 10.1016/j.ejsobi.2025.103790
Veronika Gergócs-Winkler , Norbert Flórián , Bence Kovács , Réka Aszalós , András Bidló , Péter Ódor
Continuous cover forestry is widely regarded as a more ecologically sustainable alternative to traditional rotation-based systems in Europe. However, the short- and long-term impacts of different forestry interventions on soil biota remain poorly understood. We investigated the effects of four forest management treatments on soil-dwelling oribatid mites in a European oak–hornbeam forest, five years post-intervention. Assemblages in clear-cut, gap-cut, preparation-cut, and retention tree group plots were compared with controls. Soil fauna were sampled seasonally; climatic conditions were continuously monitored, and vegetation and soil properties measured annually. Mites were identified to species level, and both taxonomic and trait-based community metrics were analysed to assess ecological responses to the treatments. Microclimatic and soil variables did not differ significantly among treatments, but leaf litter quantity was highest in the control, preparation-cutting, and retention tree group plots. Oribatid mite density and species richness were lowest in clear-cutting and gap-cutting plots, highest in the control, and intermediate in the preparation-cutting and retention tree group plots. The most abundant species, mainly from the family Oppiidae, had reduced densities in the more intensively disturbed treatments, contributing to higher evenness in those plots. Less disturbed habitats were dominated by omnivorous, predatory, and scavenger species, with higher proportions of parthenogenetic individuals. In contrast, sexual and predominantly detritivorous species were more prevalent in the clear-cutting and gap-cutting plots. Furthermore, seasonal variation in species composition was more pronounced in these disturbed plots, whereas species composition remained more stable and homogeneous in the control plots. In conclusion, higher amount of leaf litter in less disturbed plots supported the dominance of parthenogenetic and omnivorous species. Oribatid mites proved to be sensitive indicators of long-term ecological effects, highlighting the lasting impact of forestry interventions in oak–hornbeam forests, even five years after disturbance.
在欧洲,连续覆盖森林被广泛认为是传统轮作系统的生态可持续性更好的替代方案。然而,不同林业干预措施对土壤生物群的短期和长期影响仍然知之甚少。研究了四种森林管理措施对欧洲橡树角梁林土壤中居住的甲螨的影响。与对照组相比,在清净、间隙切割、预备切割和保留树组地块上的组合。土壤动物按季节取样;持续监测气候条件,每年测量植被和土壤性质。螨类鉴定达到物种水平,并通过分类指标和性状指标分析对不同处理的生态响应。小气候和土壤变量在不同处理间差异不显著,但凋落叶数量在对照、预备砍伐和保留树组中最高。净伐和空伐样地甲螨密度和物种丰富度最低,空白样地最高,预备样地和保留样地居中。最丰富的种类,主要来自于阿蚊科,在更强烈的干扰下密度降低,有助于提高样地的均匀度。受干扰较少的生境以杂食性、掠食性和食腐性物种为主,孤雌生殖个体比例较高。相比之下,性食性和以食性为主的物种在全伐和空伐样地更为普遍。此外,受干扰样地的物种组成季节性变化更为明显,而对照样地的物种组成则更为稳定和均匀。综上所示,受干扰较少的样地凋落叶数量较多,支持孤雌杂食性物种的优势。柞蚕螨被证明是长期生态效应的敏感指标,突出了森林干预对橡树角梁林的持续影响,甚至在干扰发生5年后。
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引用次数: 0
The temporal dynamics of soil properties and microbial community structure under capsicum monoculture 辣椒单作土壤性质和微生物群落结构的时间动态
IF 3.3 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-12-01 Epub Date: 2025-10-27 DOI: 10.1016/j.ejsobi.2025.103780
Wangwang Xu , Zijian Zhao , JingXia Gao , Qianqian Ma , Fengbao Zhang , Hongbing Li , Hua Xie
The adverse effects of long-term monoculture increasingly threaten the sustainable development of the capsicum industry, leading to soil degradation and yield decline. Although monoculture systems exhibit favorable economic benefits in the early years, these advantages gradually diminish and transform into negative impacts with prolonged cultivation. However, during this transition, the changes in soil physicochemical properties and microbial communities, as well as their potential coupling mechanisms, remain unclear. In this study, soils from capsicum monocultures of 1, 2, 7, and 11 years (Y1, Y2, Y7, and Y11) were used to examine the effects of monoculture duration on soil physicochemical properties and microbial communities. Results showed that with increasing years of monoculture, soil pH in Y2, Y7, and Y11 decreased by 0.03–0.33 units compared with Y1, whereas electrical conductivity (EC), available phosphorus (AP), available potassium (AK), and saturated hydraulic conductivity (SHC) increased by 48.49–87.48 %, 163.24–342.54 %, 43.25–71.57 %, and 80.0–240.0 %, respectively. In contrast, total nitrogen (TN) and soil organic matter (SOM) increased by 24.50 % and 44.44 %, respectively, in short-term monoculture (Y2) compared with Y1, but both gradually declined with increasing monoculture duration. Nitrate nitrogen (NO3-N) and soil aggregate stability (WAS) remained relatively stable in the short term but declined markedly in the long term, with reductions of 69.30 % and 55.92 % in Y11 compared with Y1. In terms of microbial communities, short-term monoculture increased copiotrophic taxa (e.g., Proteobacteria, Mortierellomycota), whereas long-term monoculture reduced oligotrophic taxa (e.g., Acidobacteriota, Rokubacteria) and key nitrogen-cycling bacteria (e.g., Nitrospira). Simultaneously, long-term monoculture decreased the average degree, network density, and proportion of positive correlations in bacterial and fungal networks, thereby reducing community structural stability. Structural equation modeling (SEM) further indicated that pH, WAS, and NO3-N were the key factors influencing bacterial communities. These findings reveal that while short-term monoculture promotes nutrient release, long-term monoculture leads to nutrient imbalance, reduced aggregate stability, and disrupted microbial community structures, ultimately weakening carbon and nitrogen cycling functions and severely constraining the sustainable development of the capsicum industry.
长期单一栽培的不良影响日益威胁辣椒产业的可持续发展,导致土壤退化和产量下降。虽然单一栽培系统在早期表现出良好的经济效益,但随着种植时间的延长,这些优势逐渐减弱并转化为负面影响。然而,在这一转变过程中,土壤理化性质和微生物群落的变化及其潜在的耦合机制尚不清楚。本研究以辣椒1、2、7和11年(Y1、Y2、Y7和Y11)的单栽培土壤为研究对象,研究了单栽培时间对土壤理化性质和微生物群落的影响。结果表明:随着单作年份的增加,Y2、Y7和Y11土壤pH值比Y1降低0.03 ~ 0.33个单位,而电导率(EC)、有效磷(AP)、有效钾(AK)和饱和水电导率(SHC)分别提高了48.49 ~ 87.48%、163.24 ~ 342.54%、43.25 ~ 71.57%和80.0% ~ 240.0%。与Y1相比,短期单栽培(Y2)的全氮(TN)和土壤有机质(SOM)分别增加了24.50%和44.44%,但随着单栽培时间的延长,两者均逐渐下降。硝态氮(NO3−-N)和土壤团聚体稳定性(WAS)在短期内保持相对稳定,但在长期内明显下降,Y11与Y1相比分别下降69.30%和55.92%。在微生物群落方面,短期单一培养增加了富营养化类群(如变形菌、Mortierellomycota),而长期单一培养减少了贫营养化类群(如酸杆菌、Rokubacteria)和关键氮循环细菌(如硝化螺旋菌)。同时,长期单一栽培降低了细菌和真菌网络的平均程度、网络密度和正相关比例,从而降低了群落结构的稳定性。结构方程模型(SEM)进一步表明pH、WAS和NO3−-N是影响细菌群落的关键因素。综上所述,短期单一栽培促进了辣椒营养物质的释放,但长期单一栽培导致了辣椒营养物质失衡、团聚体稳定性降低、微生物群落结构破坏,最终削弱了辣椒碳氮循环功能,严重制约了辣椒产业的可持续发展。
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引用次数: 0
Responses of microarthropods and nematodes to long-term warming in alpine meadows are precipitation-dependent effects 高山草甸微节肢动物和线虫对长期变暖的响应是降水依赖效应
IF 3.3 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-12-01 Epub Date: 2025-10-15 DOI: 10.1016/j.ejsobi.2025.103776
Yao Zhu , Sisi Tang , Wei Xue , Jinhao Ma , Jiafa Luo , Lei Hu , Xiao Ren , Yuying Wang , Pengfei Wu
Global warming significantly impacts soil fauna in terrestrial ecosystems, yet the differential responses of various groups, such as surface-dwelling microarthropods, soil-dwelling microarthropods, and soil nematodes, remain poorly understood. To address this, a long-term warming experiment using open-top chambers (OTCs) was conducted in alpine meadows of the Qinghai-Tibetan Plateau. Ten years after OTC installation, surface-dwelling, soil-dwelling microarthropods and soil nematodes, plant communities, and soil properties were investigated in September in the normal precipitation year 2019 and in the wet year 2020. The results were that: (1) shifts in taxonomic composition were more pronounced in surface-dwelling microarthropods and soil nematodes than in soil-dwelling microarthropods; (2) warming increased nematode taxonomic richness and Shannon diversity but reduced nematode abundance and surface-dwelling arthropod richness in the normal year, while only nematode abundance increased in the wet year; (3) warming altered nematode trophic structure by decreasing the relative abundance of bacterivores and increasing that of plant-parasites; (4) soil moisture and temperature were the primary drivers of soil faunal community changes, with ammonium nitrogen also being an important factor for soil nematodes. Our results demonstrate that the soil nematodes exhibited the strongest response to warming, followed by surface-dwelling and soil-dwelling microarthropods, and the warming effects on soil fauna abundance and diversity were dependent on precipitation. These taxon-specific sensitivities highlight their utility as bioindicators for monitoring alpine ecosystems.
全球变暖对陆地生态系统土壤动物有显著影响,但对地表微节肢动物、土壤微节肢动物和土壤线虫等不同类群的差异反应仍知之甚少。在OTC安装10年后,于2019年正常降水年和2020年湿润年的9月调查了地表生活、土壤生活的微节肢动物和土壤线虫、植物群落和土壤性质。结果表明:(1)地表微节肢动物和土壤线虫的分类学组成变化比土壤微节肢动物更明显;(2)气候变暖增加了线虫的分类丰富度和Shannon多样性,但降低了线虫的丰富度和地表节肢动物的丰富度,而湿润年只有线虫的丰富度增加;(3)变暖改变了线虫的营养结构,降低了食菌动物的相对丰度,增加了植物寄生物的相对丰度;(4)土壤湿度和温度是土壤动物群落变化的主要驱动因子,铵态氮也是土壤线虫群落变化的重要驱动因子。结果表明,土壤线虫对气候变暖的响应最强烈,其次是地表生活动物和土壤生活小节肢动物,气候变暖对土壤动物丰度和多样性的影响依赖于降水。这些分类群特异性的敏感性突出了它们作为监测高山生态系统的生物指标的效用。
{"title":"Responses of microarthropods and nematodes to long-term warming in alpine meadows are precipitation-dependent effects","authors":"Yao Zhu ,&nbsp;Sisi Tang ,&nbsp;Wei Xue ,&nbsp;Jinhao Ma ,&nbsp;Jiafa Luo ,&nbsp;Lei Hu ,&nbsp;Xiao Ren ,&nbsp;Yuying Wang ,&nbsp;Pengfei Wu","doi":"10.1016/j.ejsobi.2025.103776","DOIUrl":"10.1016/j.ejsobi.2025.103776","url":null,"abstract":"<div><div>Global warming significantly impacts soil fauna in terrestrial ecosystems, yet the differential responses of various groups, such as surface-dwelling microarthropods, soil-dwelling microarthropods, and soil nematodes, remain poorly understood. To address this, a long-term warming experiment using open-top chambers (OTCs) was conducted in alpine meadows of the Qinghai-Tibetan Plateau. Ten years after OTC installation, surface-dwelling, soil-dwelling microarthropods and soil nematodes, plant communities, and soil properties were investigated in September in the normal precipitation year 2019 and in the wet year 2020. The results were that: (1) shifts in taxonomic composition were more pronounced in surface-dwelling microarthropods and soil nematodes than in soil-dwelling microarthropods; (2) warming increased nematode taxonomic richness and Shannon diversity but reduced nematode abundance and surface-dwelling arthropod richness in the normal year, while only nematode abundance increased in the wet year; (3) warming altered nematode trophic structure by decreasing the relative abundance of bacterivores and increasing that of plant-parasites; (4) soil moisture and temperature were the primary drivers of soil faunal community changes, with ammonium nitrogen also being an important factor for soil nematodes. Our results demonstrate that the soil nematodes exhibited the strongest response to warming, followed by surface-dwelling and soil-dwelling microarthropods, and the warming effects on soil fauna abundance and diversity were dependent on precipitation. These taxon-specific sensitivities highlight their utility as bioindicators for monitoring alpine ecosystems.</div></div>","PeriodicalId":12057,"journal":{"name":"European Journal of Soil Biology","volume":"127 ","pages":"Article 103776"},"PeriodicalIF":3.3,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145333460","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Low mycovirus presence in soil saprotrophic fungi in Dutch sandy soils 荷兰沙质土壤腐养真菌中分枝病毒含量低
IF 3.3 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-12-01 Epub Date: 2025-11-20 DOI: 10.1016/j.ejsobi.2025.103787
Ruiqi Wang , Hazal Kandemir , Jing Zhang , T. Martijn Bezemer , Peter M. van Bodegom , S. Emilia Hannula
Saprotrophic fungi play a fundamental role in soil ecosystems as primary decomposers, driving nutrient and carbon turnover on a global scale. Mycoviruses are considered widespread and can affect saprotrophic fungi by altering their properties, such as growth rate, stress resistance, and metabolite production. To advance the understanding of the prevalence and diversity of mycoviruses of soil saprotrophic fungi, we conducted parallel mycovirus screening in 28 saprotrophic fungi representing major groups of soil fungi and concomitantly explored soil metatranscriptomic data. De novo assembly of RNA-sequencing data uncovered two viruses from two fungal strains. One of these viruses, a ssRNA virus from Mucor sp., appears to represent a putative novel species. Analysis of eukaryotic RNA viruses in soil metatranscriptomes indicated that even though fungal and oomycete hosts made up 39.6 % of the classified eukaryotic viruses, there was no saprotrophic host assignment. Both methods showed that there were few mycoviruses in the Dutch sandy soils with different land uses. This led to the conclusion that mycoviruses affecting saprotrophic fungi may either be rare in these types of soils or more difficult to detect compared to other fungal groups. These results offer new insights into the ecological dynamics and viral associations of soil saprotrophic fungi, highlighting the need for broader sampling and improved approaches to assess mycovirus diversity and its potential ecological significance.
腐养真菌作为主要分解者在土壤生态系统中发挥着重要作用,在全球范围内推动养分和碳的周转。分枝病毒被认为分布广泛,可通过改变腐养真菌的特性(如生长速度、抗逆性和代谢物产生)来影响腐养真菌。为了进一步了解土壤腐养真菌中分枝病毒的流行程度和多样性,我们对28种土壤腐养真菌进行了平行分枝病毒筛选,并同时探索了土壤亚转录组学数据。从头组装rna测序数据揭示了来自两个真菌菌株的两种病毒。其中一种来自毛霉菌的ssRNA病毒似乎代表了一种假定的新物种。土壤中真核RNA病毒的亚转录组分析表明,真菌和卵菌宿主占真核病毒分类宿主的39.6%,但不存在腐坏性宿主分配。两种方法均表明,不同土地利用方式的荷兰沙质土壤中分枝病毒数量较少。由此得出结论,影响腐养真菌的分枝病毒在这些类型的土壤中可能很罕见,或者与其他真菌类群相比更难检测。这些结果为土壤腐养真菌的生态动态和病毒关联提供了新的见解,强调需要更广泛的采样和改进的方法来评估分枝病毒多样性及其潜在的生态意义。
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引用次数: 0
Heterogeneous salinity and nitrogen in the root-zone influences soil water status, rhizosphere bacteria distributions and promotes tomato growth 根区盐氮不均匀影响土壤水分状况和根际细菌分布,促进番茄生长
IF 3.3 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-12-01 Epub Date: 2025-11-01 DOI: 10.1016/j.ejsobi.2025.103781
Yuexiong Wang , Zhenchang Wang , Jinjing Liu , Rangjian Qiu , Cheng Hong , Minghao Tian , Kexin Chen , Xiaoman Qiang
Soil texture heterogeneity together with agronomic practices like drip irrigation, furrow-bed seeding, and straw mulching often introduces abrupt changes in soil physical properties, causing uneven soil salinity (Sa) and nitrogen (N) distribution in the root-zone. While rhizosphere bacterial and plant responses to Sa or N heterogeneity have been widely investigated, N supply modes may alter root responses to heterogeneous Sa stress and simultaneously influence bacterial communities. To elucidate the coupled impacts of heterogeneous Sa and N on plant growth and rhizosphere bacteria as well as their relationships, two Sa distribution patterns (Sa1: 1/5 g kg−1 NaCl on the low-/high-salinity sides; Sa2: 3/3 g kg−1 NaCl) and three N supply modes (N1: 270/0 mg kg−1 N; N2: 0/270 mg kg−1 N; N3: 135/135 mg kg−1 N) were implemented. Herein, 16S rRNA gene amplicon sequencing and co-occurrence network analysis revealed bacterial community characteristics and network topological features under different treatments. We found that compared to uniform Sa distribution, uneven distribution of Sa significantly increased root biomass and surface area on the low-salinity side, thereby facilitating compensatory uptake of water and nutrients and ultimately increasing tomato total biomass and N content. Besides, N supply modes altered plant root responses to Sa heterogeneity, with N2 and N3 tomatoes exhibiting greater total N content and biomass in plants than N1 under the Sa1 distribution. Compared to the Sa2N3 treatment, the Sa1N2 treatment increased the Chao1 index and enriched beneficial core rhizobacteria such as Acidobacteriota, enhancing potential cooperation among rare taxa. The above shifts were primarily driven by heterogeneous Sa, which altered soil water content, soil NO3-N content, EC1:5, and root distribution, thereby restructuring bacterial community composition and co-occurrence network patterns. The SEM model further indicated that variations in bacterial diversity (Chao1 index) reshaped functional profiles, thereby regulating N availability. Additionally, the Chao1 index exhibited significant positive relationships with tomato total biomass, particularly Chao1 index on the low-salinity side. This study highlights the importance of bacterial diversity of rare taxa as predictors for reflecting the coupling effect of heterogeneous salinity and nitrogen on plant growth, thereby deepening our understanding of the contribution of bacteria in plant responses to salinity-nitrogen heterogeneity.
土壤质地的异质性,加上滴灌、沟床播种和秸秆覆盖等农艺措施,往往会导致土壤物理性质的突变,导致根区土壤盐分(Sa)和氮(N)分布不均匀。虽然根际细菌和植物对Sa或N异质性的响应已被广泛研究,但N供应模式可能会改变根对异质Sa胁迫的响应,同时影响细菌群落。为了阐明非均质Sa和N对植物生长和根际细菌的耦合影响及其相互关系,采用2种Sa分布模式(低/高盐侧Sa1: 1/5 g kg - 1 NaCl; Sa2: 3/3 g kg - 1 NaCl)和3种N供应模式(N1: 270/0 mg kg - 1 N; N2: 0/270 mg kg - 1 N; N3: 135/135 mg kg - 1 N)进行研究。通过16S rRNA基因扩增子测序和共现网络分析,揭示了不同处理下细菌群落特征和网络拓扑结构特征。研究发现,与均匀分布的Sa相比,不均匀分布的Sa显著增加了低盐侧根系生物量和表面积,从而促进了水分和养分的补偿性吸收,最终提高了番茄总生物量和氮含量。此外,氮供应模式改变了植株根系对Sa异质性的响应,在Sa1分布下,N2和N3番茄的植株总氮含量和生物量均高于N1。与Sa2N3处理相比,Sa1N2处理提高了Chao1指数,丰富了有益的核心根瘤菌,如酸性菌群,增强了稀有类群之间的合作潜力。上述变化主要由非均质Sa驱动,改变了土壤含水量、土壤NO3-N含量、EC1:5和根系分布,从而重构了细菌群落组成和共生网络格局。SEM模型进一步表明,细菌多样性(Chao1指数)的变化重塑了功能谱,从而调节氮的有效性。此外,Chao1指数与番茄总生物量呈极显著正相关,特别是低盐侧的Chao1指数。本研究强调了稀有分类群细菌多样性作为反映非均质盐氮对植物生长耦合效应的预测因子的重要性,从而加深了我们对细菌在植物对盐氮非均质响应中的贡献的认识。
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引用次数: 0
Microbial necromass carbon mediates nonlinear soil carbon response to nitrogen application in the greenhouse vegetable production system 温室蔬菜生产系统中微生物坏死体碳介导土壤碳对施氮的非线性响应
IF 3.3 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-12-01 Epub Date: 2025-11-21 DOI: 10.1016/j.ejsobi.2025.103788
Zhou Jia , Lifeng Zhang , Chengzhang Wang , Longgang Jiang , Erxiong Zhu , Meng Li , Ruonan Li , Li Guo , Yihong Li , Liying Wang , Jianshuo Shi
Soil organic carbon (SOC) constitutes the largest terrestrial C reservoir, playing a pivotal role in global C cycling. Nitrogen (N) fertilization has been widely recognized as a major driver of SOC transformation and accumulation. However, the specific mechanistic pathways by which long-term differential N application rates modulate microbially derived SOC components and thereby influence SOC persistence in greenhouse vegetable production (GVP) systems remain to be elucidated. We implemented a 12-year field trial assessing five chemical N application rates (cucumber/tomato season: 0/0 (N0), 200/200 (N200), 300/225 (N300), 600/450 (N600), and 900/675 (N900) kg N ha−1 yr−1) in an intensive GVP system. This study integrates measurements of microbial necromass carbon (MNC), kinetics of C- and N-acquiring hydrolases, soil chemical properties and phospholipid fatty acids (PLFAs) to unravel the impacts of N application rates on SOC dynamics and persistence. Our results demonstrate that MNC constitutes 54.5–77.0 % of SOC across all N addition treatments, with fungal necromass C (FNC) averaging 4.40 times higher than bacterial necromass C (BNC). Interestingly, our findings revealed that the MNC/SOC was nonlinearly correlated with elevated N addition rates. Specifically, the BNC/SOC peaked under the N600 treatment, whereas the FNC/SOC was maximized under the N300 treatment and then showed a downward trend. Hierarchical partitioning results indicated that enzymatic kinetics as the predominant regulator of both MNC/SOC and FNC/SOC, whereas soil nutrient attributes exerted stronger control over BNC/SOC. Moreover, the PLS-PM results identified soil properties (e.g., Total N, C:N, NO3-N, dissolved organic C, pH, and electrical conductivity) as the primary positive regulators of BNC/SOC. However, FNC/SOC and MNC/SOC were predominantly driven by the kinetics of C- (α-glucosidase, β-glucosidase, β-xylosidase) and N-acquiring (N-acetyl-glucosaminidase) enzymes. Therefore, these drivers exhibited diametrically opposing effects on BNC/SOC relative to FNC/SOC (MNC/SOC). Our findings establish that optimized N management is critical for sustaining SOC sequestration in GVP systems, providing a mechanistic basis for linking N application to microbial-mediated C stabilization in the intensive agriculture systems.
土壤有机碳(SOC)是最大的陆地碳库,在全球碳循环中起着关键作用。氮肥是土壤有机碳转化和积累的主要驱动因素。然而,长期差异施氮量调节微生物来源的有机碳组分,从而影响温室蔬菜生产(GVP)系统中有机碳持久性的具体机制途径仍有待阐明。我们实施了一项为期12年的田间试验,在集约化GVP系统中评估了5种化学施氮率(黄瓜/番茄季节:0/0 (N0)、200/200 (N200)、300/225 (N300)、600/450 (N600)和900/675 (N900) kg N ha - 1年- 1)。本研究综合了微生物坏死体碳(MNC)、获取C和N的水解酶动力学、土壤化学性质和磷脂脂肪酸(PLFAs)的测量,以揭示施氮量对土壤有机碳动态和持久性的影响。结果表明,在所有N添加处理中,MNC占有机碳的54.5 - 77.0%,真菌坏死团C (FNC)平均比细菌坏死团C (BNC)高4.40倍。有趣的是,我们的研究结果表明,MNC/SOC与N添加速率的升高呈非线性相关。其中,BNC/SOC在N600处理下达到峰值,而FNC/SOC在N300处理下达到最大值,之后呈下降趋势。分层划分结果表明,酶动力学是MNC/SOC和FNC/SOC的主要调节因子,而土壤养分属性对BNC/SOC的控制作用更强。此外,PLS-PM结果确定土壤性质(如总氮、C:N、NO3−-N、溶解有机碳、pH和电导率)是BNC/SOC的主要正调节因子。FNC/SOC和MNC/SOC主要受C- (α-葡萄糖苷酶、β-葡萄糖苷酶、β-木糖糖苷酶)和n -获取(n -乙酰-葡萄糖苷酶)酶动力学驱动。因此,这些驱动因素对BNC/SOC的影响与FNC/SOC (MNC/SOC)截然相反。研究结果表明,优化的氮素管理对维持有机碳在集约化农业系统中的固存至关重要,为在集约化农业系统中将氮素施用与微生物介导的碳稳定联系起来提供了机制基础。
{"title":"Microbial necromass carbon mediates nonlinear soil carbon response to nitrogen application in the greenhouse vegetable production system","authors":"Zhou Jia ,&nbsp;Lifeng Zhang ,&nbsp;Chengzhang Wang ,&nbsp;Longgang Jiang ,&nbsp;Erxiong Zhu ,&nbsp;Meng Li ,&nbsp;Ruonan Li ,&nbsp;Li Guo ,&nbsp;Yihong Li ,&nbsp;Liying Wang ,&nbsp;Jianshuo Shi","doi":"10.1016/j.ejsobi.2025.103788","DOIUrl":"10.1016/j.ejsobi.2025.103788","url":null,"abstract":"<div><div>Soil organic carbon (SOC) constitutes the largest terrestrial C reservoir, playing a pivotal role in global C cycling. Nitrogen (N) fertilization has been widely recognized as a major driver of SOC transformation and accumulation. However, the specific mechanistic pathways by which long-term differential N application rates modulate microbially derived SOC components and thereby influence SOC persistence in greenhouse vegetable production (GVP) systems remain to be elucidated. We implemented a 12-year field trial assessing five chemical N application rates (cucumber/tomato season: 0/0 (N0), 200/200 (N200), 300/225 (N300), 600/450 (N600), and 900/675 (N900) kg N ha<sup>−1</sup> yr<sup>−1</sup>) in an intensive GVP system. This study integrates measurements of microbial necromass carbon (MNC), kinetics of C- and N-acquiring hydrolases, soil chemical properties and phospholipid fatty acids (PLFAs) to unravel the impacts of N application rates on SOC dynamics and persistence. Our results demonstrate that MNC constitutes 54.5–77.0 % of SOC across all N addition treatments, with fungal necromass C (FNC) averaging 4.40 times higher than bacterial necromass C (BNC). Interestingly, our findings revealed that the MNC/SOC was nonlinearly correlated with elevated N addition rates. Specifically, the BNC/SOC peaked under the N600 treatment, whereas the FNC/SOC was maximized under the N300 treatment and then showed a downward trend. Hierarchical partitioning results indicated that enzymatic kinetics as the predominant regulator of both MNC/SOC and FNC/SOC, whereas soil nutrient attributes exerted stronger control over BNC/SOC. Moreover, the PLS-PM results identified soil properties (e.g., Total N, C:N, NO<sub>3</sub><sup>−</sup>-N, dissolved organic C, pH, and electrical conductivity) as the primary positive regulators of BNC/SOC. However, FNC/SOC and MNC/SOC were predominantly driven by the kinetics of C- (α-glucosidase, β-glucosidase, β-xylosidase) and N-acquiring (N-acetyl-glucosaminidase) enzymes. Therefore, these drivers exhibited diametrically opposing effects on BNC/SOC relative to FNC/SOC (MNC/SOC). Our findings establish that optimized N management is critical for sustaining SOC sequestration in GVP systems, providing a mechanistic basis for linking N application to microbial-mediated C stabilization in the intensive agriculture systems.</div></div>","PeriodicalId":12057,"journal":{"name":"European Journal of Soil Biology","volume":"127 ","pages":"Article 103788"},"PeriodicalIF":3.3,"publicationDate":"2025-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145575912","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Soil pH and organic phosphorus co-shape the diversity and assembly processes of arbuscular mycorrhizal fungal community in subtropical broadleaved forests 土壤pH和有机磷共同塑造了亚热带阔叶林丛枝菌根真菌群落的多样性和组装过程
IF 3.3 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-12-01 Epub Date: 2025-11-06 DOI: 10.1016/j.ejsobi.2025.103785
Rui Xu , Zhucheng Yu , Yang Liu , Yidan Liu , Xingcong Ma , Xiaomin Ma , Wenhao Jin , Yongfu Li , Junhui Chen , Hua Qin
Arbuscular mycorrhizal (AM) fungal represent a vital pathway for plant nutrient acquisition in soils, especially in nutrient-limited subtropical broadleaved forests where AM fungi extensively colonize roots. However, critical knowledge gaps persist regarding how soil phosphorus and nitrogen gradients (including organic and inorganic forms) influence the structure and assembly mechanisms of AM fungal communities in subtropical broadleaved forests. We conducted field sampling of Schima superba rhizosphere soils (typically AM tree species), analyzing the concentrations of key soil nutrient forms (e.g., available phosphorus, organic phosphorus, ammonium, nitrate) and the AM fungal community structure via high-throughput sequencing of the 18S rRNA gene. Correlation revealed that AM fungal biomarkers (NLFA 16:1ω5) increased with soil pH. AM fungal richness exhibited a significant quadratic relationship with soil organic phosphorus (OP) concentrations and was negatively correlated with the available phosphorus (AP) to OP ratio, suggesting that a higher proportion of readily available phosphorus suppresses AM fungal diversity. Community structure (indicated by NMDS1) was primarily influenced by total phosphorus (TP) concentrations and pH, while network complexity was significantly associated with AP and NH4+-N. The assembly of AM fungal communities was dominated by deterministic processes, whose influence decreased with increasing soil OP and TP concentrations. Random forest analyses and structure equation modeling (SEM) demonstrated that the structure and assembly of AM fungal communities were jointly shaped by soil pH and P dynamic (especially OP and TP). Overall, these findings elucidate that soil pH and P forms (particularly OP) are pivotal factors governing the structure and assembly processes of AM fungal communities in subtropical broadleaved forests, advancing our understanding of AM fungal community variation in nutrient-poor environments.
丛枝菌根真菌(AM)是植物在土壤中获取养分的重要途径,特别是在营养有限的亚热带阔叶林中,AM真菌广泛定植在根部。然而,关于土壤磷氮梯度(包括有机和无机形式)如何影响亚热带阔叶林AM真菌群落的结构和组装机制,仍然存在关键的知识空白。我们对木荷根际土壤(典型的AM树种)进行了田间取样,通过18S rRNA基因的高通量测序,分析了土壤关键养分形态(如速效磷、有机磷、铵、硝态氮)的浓度和AM真菌群落结构。相关分析表明,AM真菌生物标志物(NLFA 16:1ω5)随土壤ph升高而升高,AM真菌丰富度与土壤有机磷(OP)浓度呈显著的二次关系,与速效磷(AP) / OP比呈负相关,表明较高的速效磷比例抑制AM真菌多样性。群落结构(由NMDS1表示)主要受总磷(TP)浓度和pH的影响,而网络复杂性与AP和NH4+-N显著相关。AM真菌群落的聚集受确定性过程支配,其影响随土壤有机磷和总磷浓度的增加而减小。随机森林分析和结构方程模型(SEM)表明,土壤pH和P动态(特别是有机磷和总磷)共同塑造了AM真菌群落的结构和组合。总体而言,这些发现阐明了土壤pH和P形态(特别是OP)是控制亚热带阔叶林AM真菌群落结构和组装过程的关键因素,促进了我们对营养不良环境下AM真菌群落变化的理解。
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引用次数: 0
Interplanting Phoebe bournei modifies soil microbial community characteristics in Cunninghamia lanceolata monocultures 间作杉木对杉木单作土壤微生物群落特征的影响
IF 3.3 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-09-01 Epub Date: 2025-08-31 DOI: 10.1016/j.ejsobi.2025.103762
Dan Zhou , Chengjian Hong , Jiahuan Guo , Chang Pan , Yazhou Tang , Jie Yan , Kaizhi Xie , Yuanchun Yu
The prolonged monoculture of Cunninghamia lanceolata depletes soil fertility, making the introduction of broadleaf trees—Phoebe bournei indispensable for soil restoration—yet its impact on the belowground ecological environment remains inadequately explored. Here, we investigated how uneven-aged interplanting of P. bournei in subtropical C. lanceolata stands alters microbial community characteristics and correlates with major edaphic variables across 0–60 cm soil profile. Interplanting P. bournei improved soil aeration, water conservation, and nutrient availability, driving significant shifts in bacterial and fungal β-diversity and partial but significant changes in community composition. It also enhanced ecological drift and reduced dispersal limitation, strengthening homogeneous selection in bacterial communities (0–40 cm) while promoting drift in fungal communities (0–60 cm). These structural and assembly changes suggest potential functional alterations in organic-matter degradation and nutrient cycling. Interplanting P. bournei led to marked improvements in soil microbial ecology, as evidenced by higher abundances of Acidobacteria and Ascomycota, indicative of enhanced complex-carbon degradation; elevated bacterial cellulolytic capacity and accelerated organic-matter turnover; promotion of saprotroph–symbiotroph nutrition; and reduced subsoil pathotroph abundance, which may indirectly support C. lanceolata health. Lastly, soil nutrient elements (e.g., soil organic carbon, total phosphorus) and enzyme activities (e.g., Cellobiohydrolase, Sucrase) were identified as key drivers of microbial community structure and functional potential, highlighting their critical roles in shaping soil microbial ecosystems. In summary, uneven-aged interplanting P. bournei in C. lanceolata plantations optimized soil ecosystem functions, offering a sustainable strategy to enhance forest productivity and improve soil health.
杉木的长期单一栽培消耗了土壤肥力,因此引入阔叶树——杉木是恢复土壤不可缺少的手段,但其对地下生态环境的影响尚未得到充分的探讨。本文以亚热带杉木林为研究对象,研究了不均匀套种林龄对微生物群落特征的影响及其与0 ~ 60 cm土壤剖面主要土壤变量的关系。套种柏树改善了土壤的通气性、保水性和养分有效性,显著改变了细菌和真菌的β-多样性和部分但显著的群落组成。它还增强了生态漂变,减少了扩散限制,加强了细菌群落(0-40 cm)的同质选择,同时促进了真菌群落(0-60 cm)的漂变。这些结构和组装的变化表明有机物降解和养分循环的潜在功能改变。土壤中酸菌群和子囊菌群的丰度显著提高,表明复合碳降解能力增强;提高细菌的纤维素分解能力和加速有机物的周转;腐养-共生营养促进;土壤病原菌丰度降低,可能间接支持杉木的健康。最后,土壤养分元素(如土壤有机碳、全磷)和酶活性(如纤维素生物水解酶、蔗糖酶)被认为是微生物群落结构和功能潜力的关键驱动因素,强调了它们在塑造土壤微生物生态系统中的关键作用。综上所述,间作杉木优化了土壤生态系统功能,为提高森林生产力和改善土壤健康提供了可持续的策略。
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引用次数: 0
Changes in carbon and nitrogen stable isotopic ratios with decomposition of plant residue 植物残体分解过程中碳氮稳定同位素比值的变化
IF 3.7 2区 农林科学 Q1 ECOLOGY Pub Date : 2025-09-01 Epub Date: 2025-07-09 DOI: 10.1016/j.ejsobi.2025.103755
Xiaodong Chen , Ryoko Senda , Yuki Mori , Syuntaro Hiradate
The transformation of plant residue into soil organic matter (SOM) plays a crucial role in maintaining the function of ecosystems. To elucidate the formation processes of SOM from plant residue, we examined changes in carbon (C) and nitrogen (N) contents, along with δ13C and δ15N values, during the decomposition of Artemisia princeps residue in an incubation experiment using 100 % quartz sand as an artificial soil. The results indicated that plant residue decomposition occurred in two distinct stages: (1) a rapid initial loss of C and N (43–54 % and 36–47 %, respectively) within the early 90 days, followed by (2) a slower loss (4–14 % and 7–15 %, respectively) over the remaining 90–360 days. In the early stage, δ13C and δ15N values increased similarly to trophic fractionation, with a δ15N/δ13C ratio of 1.54. In the latter stage, this ratio increased significantly to 12.8, probably due to increased C resistance to decomposition, while continuous N metabolism. By integrating data from both the literature and our study, we concluded that C and N in plant residue undergo one to two times the metabolic turnover relative to trophic turnover to form stable SOM. These findings are essential for understanding the preservation of plant residue, particularly labile compounds, in soils. This preservation would occur through microbial transformation. Our study offers a theoretical framework for understanding the SOM dynamics based on δ13C and δ15N values, emphasizing the utility of stable C and N isotope analyses in elucidating SOM transformation.
植物残茬向土壤有机质的转化对维持生态系统的功能起着至关重要的作用。为了阐明植物残渣中SOM的形成过程,我们采用100%石英砂作为人工土壤,研究了青蒿残渣分解过程中碳(C)和氮(N)含量以及δ13C和δ15N值的变化。结果表明,植物残体分解分两个阶段:(1)初90 d内C和N的快速损失(分别为43 - 54%和36 - 47%),随后(2)90 - 360 d内C和N的缓慢损失(分别为4 - 14%和7 - 15%)。早期δ13C和δ15N值的增加与营养分馏相似,δ15N/δ13C比值为1.54。在后期,这一比例显著增加到12.8,可能是由于C对分解的抵抗力增强,同时N的代谢持续进行。通过综合文献数据和我们的研究,我们得出结论,植物残体中的C和N相对于营养周转要经历一到两倍的代谢周转才能形成稳定的SOM。这些发现对于了解植物残留物,特别是不稳定化合物在土壤中的保存是至关重要的。这种保存将通过微生物转化来实现。我们的研究为理解基于δ13C和δ15N值的SOM动力学提供了理论框架,强调了稳定C和N同位素分析在阐明SOM转变中的作用。
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引用次数: 0
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European Journal of Soil Biology
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