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Impact of Biofilms on Surface Properties of Polymethyl Methacrylate (PMMA) Resins. 生物膜对聚甲基丙烯酸甲酯 (PMMA) 树脂表面特性的影响。
IF 3.5 4区 生物学 Q2 MICROBIOLOGY Pub Date : 2024-10-27 DOI: 10.1002/jobm.202400460
Syed Ali Danish Kazmi, Tahira Soomro, Rimsha Soomro, Fouzia Zeeshan Khan, Bushra Jabeen, Tanveer Abbas, Yasir Raza, Zulfiqar Ali Mirani

Poly(methyl methacrylate) (PMMA) resins are widely used in medical and dental applications. Their susceptibility to bacterial biofilm formation poses significant challenges related to material degradation and infection risk. This study investigated the effects of Pseudomonas aeruginosa (P. aeruginosa) and Staphylococcus aureus (S. aureus) biofilms on PMMA resin surface properties over a 45-day period at 35°C. The study examined various parameters including biofilm adhesion, morphology, surface roughness, hydrophobicity, solid fraction, and zeta potential. PMMA resin specimens were inoculated with bacteria and incubated for 45 days. Biofilm adhesion was visually assessed, while surface characterization was conducted using scanning electron microscopy (SEM), atomic force microscopy (AFM), roughness analysis, contact angle measurements, solid fraction determination, and zeta potential analysis. The P. aeruginosa and S. aureus isolates were selected based on their biofilm-positive characteristics, which were further confirmed using Congo red and biofilm formation assays through crystal violet staining and spectrophotometric analysis. The results demonstrated robust biofilm adhesion on PMMA surfaces. SEM and AFM imaging revealed textured surfaces with elevated structures and depressions within the biofilm matrix. Biofilm-exposed resins exhibited significantly increased roughness (Ra = 164.5 nm, Rq = 169.5 nm) and hydrophobicity (mean angle = 85.5°-90.5°) compared to control samples (Ra = 38-50 nm, angle = 55°). Solid fraction measurements indicated a denser biofilm matrix on exposed resins (0.908) compared to controls (0.65). Additionally, zeta potential values were more negative for biofilm-exposed resins (mean = -84.2 mV) than controls (-45.0 mV). These findings underscore the substantial alterations in PMMA resin surface properties induced by bacterial biofilms, emphasizing the critical need for strategies to prevent biofilm formation and mitigate associated risks in healthcare settings. Future research should focus on developing anti-biofilm coatings or treatments to preserve the integrity and functionality of PMMA materials.

聚甲基丙烯酸甲酯(PMMA)树脂广泛应用于医疗和牙科领域。它们容易形成细菌生物膜,这给材料降解和感染风险带来了巨大挑战。本研究调查了铜绿假单胞菌(P. aeruginosa)和金黄色葡萄球菌(S. aureus)生物膜在 35°C 下 45 天内对 PMMA 树脂表面特性的影响。该研究考察了各种参数,包括生物膜的附着力、形态、表面粗糙度、疏水性、固体分数和 zeta 电位。在 PMMA 树脂试样中接种细菌并培养 45 天。对生物膜的附着力进行目测评估,同时使用扫描电子显微镜(SEM)、原子力显微镜(AFM)、粗糙度分析、接触角测量、固体分数测定和 zeta 电位分析进行表面表征。根据铜绿假单胞菌和金黄色葡萄球菌的生物膜阳性特征选择了这两种分离物,并使用刚果红和生物膜形成测定法通过水晶紫染色和分光光度分析进一步确认了这些特征。结果表明,PMMA 表面的生物膜附着力很强。扫描电子显微镜和原子力显微镜成像显示了生物膜基质内具有隆起结构和凹陷的纹理表面。与对照样品(Ra = 38-50 nm,角度 = 55°)相比,暴露于生物膜的树脂表现出明显增加的粗糙度(Ra = 164.5 nm,Rq = 169.5 nm)和疏水性(平均角度 = 85.5°-90.5°)。固体组分测量结果表明,与对照组(0.65)相比,暴露树脂上的生物膜基质密度更高(0.908)。此外,生物膜暴露树脂的 zeta 电位值(平均 = -84.2 mV)比对照组(-45.0 mV)更负。这些发现强调了细菌生物膜对 PMMA 树脂表面特性的重大改变,强调了在医疗保健环境中防止生物膜形成和降低相关风险的策略的迫切需要。未来的研究应侧重于开发抗生物膜涂层或处理方法,以保持 PMMA 材料的完整性和功能性。
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引用次数: 0
Arsenic Stress Mitigation Using a Novel Plant Growth-Promoting Bacterial Strain Bacillus mycoides NR5 in Spinach Plant (Spinacia oleracea L.). 在菠菜(Spinacia oleracea L.)中使用新型植物生长促进菌株枯草芽孢杆菌 NR5 缓解砷胁迫。
IF 3.5 4区 生物学 Q2 MICROBIOLOGY Pub Date : 2024-10-22 DOI: 10.1002/jobm.202400401
Khan M Sarim, Renu Shukla, Manish S Bhoyar, Baljeet Kaur, Dhananjay P Singh

Present study aimed to identify arsenic (As)-resistant bacterial strains that can be used to mitigate arsenic stress. A bacterium Bacillus mycoides NR5 having As tolerance limit of 1100 mg L-1 was isolated from Nag River, Maharashtra, India. It was also equipped with plant growth-promoting (PGP) attributes like phosphate solubilization, siderophores, ammonia, and nitrate reduction, with added antibiotic tolerance. Furthermore, scanning electron microscopy (SEM) and transmission electron micrograph (TEM) suggested biosorption as possible mechanisms of arsenic tolerance. A strong peak in FTIR spectra at 3379.0 corresponding to amine in As-treated NR5 also indicated metal interaction with cell surface protein. Amplification of arsenic reductase gene in NR5 further suggested intracellular transformation of As speciation. Moreover, As tolerance capability of NR5 was shown in spinach plants in which the bacterium effectively mitigated 25 ppm As by producing defense-related proline molecules. Evidence from SEM, TEM, and FTIR, concluded biosorption possibly the primary mechanism of As tolerance in NR5 along with the transformation of arsenic. B. mycoides NR5 with PGP attributes, high As tolerance, and antibiotic resistance mediated enhanced As tolerance in spinach plants advocated that the strain can be a better choice for As bioremediation in contaminated agricultural soil and water.

本研究旨在鉴定可用于缓解砷胁迫的抗砷(As)细菌菌株。研究人员从印度马哈拉施特拉邦纳格河分离出了耐砷极限为 1100 毫克/升的枯草芽孢杆菌 NR5。它还具有促进植物生长(PGP)的特性,如磷酸盐溶解、嗜苷酸、氨和硝酸盐还原,以及抗生素耐受性。此外,扫描电子显微镜(SEM)和透射电子显微镜(TEM)表明,生物吸附是砷耐受性的可能机制。傅立叶变换红外光谱在 3379.0 处出现了一个强峰,对应于砷处理过的 NR5 中的胺,这也表明金属与细胞表面蛋白发生了相互作用。NR5 中砷还原酶基因的扩增进一步表明了砷在细胞内的转化。此外,NR5 在菠菜植物中的耐砷能力也得到了证实,该细菌通过产生与防御相关的脯氨酸分子,有效缓解了 25 ppm 的砷浓度。扫描电子显微镜(SEM)、电子显微镜(TEM)和傅立叶变换红外光谱(FTIR)的证据表明,生物吸附可能是 NR5 耐受砷和砷转化的主要机制。具有 PGP 特性、高砷耐受性和抗生素耐受性的 B. mycoides NR5 增强了菠菜植物对砷的耐受性,因此该菌株可作为受污染农业土壤和水体砷生物修复的更好选择。
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引用次数: 0
Assessment of Lethal, Sublethal, Transgenerational, and Biochemical Effects of Isaria fumosorosea on Mythimna separata. 评估 Isaria fumosorosea 对 Mythimna separata 的致死、亚致死、跨代和生化影响。
IF 3.5 4区 生物学 Q2 MICROBIOLOGY Pub Date : 2024-10-22 DOI: 10.1002/jobm.202400548
Mudasar Raza, Shoaib Freed, Rizwan Ahmed, Afifa Naeem

Mythimna separata is a destructive polyphagous pest of field crops. Insecticides are generally applied for its control which not only negatively affect natural enemies and the environment and cause resistance in the insect pests. There is a need for the friendly method which is safe for the environment and life. Currently, entomopathogenic fungi are being used as biological control agents for different insects. The influence of Isaria fumosorosea on survival, life table parameters, and enzymatic activities of M. separata were assessed. On the seventh day post-treatment, the highest concentration 3 × 108 spores/mL-1 caused the 92.5% larval mortality. The effect of LC15 and LC50 of I. fumosorosea were recorded on parental generation (F0) and first filial generation (F1) of M. separata. The life table parameters of F1 showed a decreasing trend in the intrinsic rate (r), net reproductive rate (Ro), mean generational time (T), total larval duration, and fecundity ratio in treated groups. In LC15 and LC50, groups the average fecundity ratio was 319.2 and 191.18 eggs/female, respectively. The activities of detoxifying enzymes were concentration-dependent and highest activities were recorded on the third day. I. fumosorosea negatively affected the growth parameters of M. separata and can be included in M. separata management program.

Mythimna separata 是一种田间作物的毁灭性多食性害虫。通常使用杀虫剂来控制它,这不仅会对天敌和环境造成负面影响,还会导致害虫产生抗药性。因此需要一种对环境和生命安全的友好方法。目前,昆虫病原真菌被用作不同昆虫的生物防治剂。本研究评估了 Isaria fumosorosea 对 M. separata 的存活率、生命表参数和酶活性的影响。在处理后第七天,最高浓度 3 × 108 个孢子/毫升-1 会导致 92.5% 的幼虫死亡。记录了 I. fumosorosea 的 LC15 和 LC50 对 M. separata 亲代(F0)和第一代子代(F1)的影响。F1 的生命表参数显示,处理组的固有率 (r)、净生殖率 (Ro)、平均世代时间 (T)、总幼虫存活时间和繁殖率均呈下降趋势。在 LC15 和 LC50 组中,平均繁殖率分别为 319.2 和 191.18 个卵/雌虫。解毒酶的活性与浓度有关,第三天的活性最高。I. fumosorosea 对分离姬鼠的生长参数有负面影响,可将其纳入分离姬鼠管理计划。
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引用次数: 0
Peanut-Colonized Piriformospora indica Enhanced Drought Tolerance by Modulating the Enzymes and Expression of Drought-Related Genes. 通过调节与干旱相关的基因的酶和表达,花生套种的 Piriformospora indica 增强了耐旱性。
IF 3.5 4区 生物学 Q2 MICROBIOLOGY Pub Date : 2024-10-22 DOI: 10.1002/jobm.202400305
Jie Gao, Chen Wang, Pei-Cong Tian, Chuang Liu, Taswar Ahsan, Yi Wei, Yu-Qian Huang, Shi-Hong Zhang

Peanut (Arachis hypogaea L.) is an important cash and oil seed crop, mostly distributed in arid and semi-arid areas. In recent years, due to the influence of atmospheric circulation anomalies and other factors, drought has become frequent and increasingly serious in China. This has posed serious challenges to peanut production. The objective of this study was to investigate the potential of the endophytic fungus Piriformospora indica to form a symbiotic relationship with peanut plants and to evaluate the drought tolerance of P. indica-colonized peanut plants subjected to a simulated drought stress treatment using 20% polyethylene glycol 6000 (PEG6000). The endophytic fungus P. indica affected the physiological characteristics of the host plant by colonizing the plant roots, thereby conferring greater resistance to drought stress. This fungus strongly colonized the roots of peanuts and was found to enhance root activity after 24 h of P. indica colonization under PEG6000. Catalase (CAT) and peroxidase (POD) activities were increased at 24 h in peanut leaves colonized with P. indica. Expression of drought-related genes, such as AhNCED1, AhP5CS, and DREB2A was upregulated at 24 h of P. indica colonization. In addition, after PEG6000 treatment, proline, soluble protein, and abscisic acid (ABA) concentrations in plants were increased, while the accumulation of malondialdehyde (MDA), and hydrogen peroxide (H2O2) was decreased in P. indica colonized peanut. In conclusion, P. indica mediated peanut plant protection against the detrimental effects of drought resulted from enhanced antioxidant enzyme activities, and the upregulated expression of drought-related genes for lower membrane damage.

花生(Arachis hypogaea L.)是一种重要的经济作物和油料作物,主要分布在干旱和半干旱地区。近年来,受大气环流异常等因素的影响,我国干旱频发,且日趋严重。这给花生生产带来了严峻挑战。本研究旨在探讨内生真菌 Piriformospora indica 与花生植株形成共生关系的潜力,并评估 P. indica 定殖的花生植株在 20% 聚乙二醇 6000(PEG6000)的模拟干旱胁迫处理下的耐旱性。内生真菌 P. indica 通过在寄主植物根部定殖影响了寄主植物的生理特性,从而增强了对干旱胁迫的抵抗力。在 PEG6000 条件下,这种真菌在花生根部的定殖作用很强,在 P. indica 定殖 24 小时后,根系活性得到增强。用 P. indica 定殖的花生叶片在 24 小时后过氧化氢酶(CAT)和过氧化物酶(POD)活性增加。在 P. indica 定殖 24 小时后,干旱相关基因(如 AhNCED1、AhP5CS 和 DREB2A)的表达上调。此外,经过 PEG6000 处理后,植株中的脯氨酸、可溶性蛋白和脱落酸(ABA)浓度增加,而 P. indica 定殖花生中丙二醛(MDA)和过氧化氢(H2O2)的积累减少。总之,P. indica 能增强抗氧化酶的活性,并上调干旱相关基因的表达,从而降低膜损伤,从而保护花生植物免受干旱的不利影响。
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引用次数: 0
Pathogenicity of Bacillus subtilis Against Symbiotic Fungus of Euwallacea fornicates (Coleoptera: Scolytidae) From South India. 枯草芽孢杆菌对南印度 Euwallacea fornicates (Coleoptera: Scolytidae) 共生真菌的致病性。
IF 3.5 4区 生物学 Q2 MICROBIOLOGY Pub Date : 2024-10-22 DOI: 10.1002/jobm.202400455
Kammatterikunnu Ashif, Thattanteparambil Rabeesh

In India, the shot-hole borer, Euwallacea fornicates, commonly known as the tea borer, infests the galleries of tea plant twigs under natural conditions and is a major pest of tea. The current investigation focuses on the antagonistic ability of Bacillus subtilis to directly inhibit the growth of plant pathogens in two different climatic regions of tea-growing area. The evaluation reveals that (a) B. subtilis can directly suppress the growth of plant pathogens (b) in the in vitro evaluation; the B. subtilis suppressed the growth of the Fusarium ambrossium, which is the nourishment for the ambrosia beetle, (c) it also revealed that the antagonistic microbes and the entomopathogens are able to control the pest population of the shot hole borer of tea. The impact of B. subtilis on mycelial growth, sporulation, and spore germination of F. ambrosium in agar medium was observed. In the field condition on the post-treatment assessments shows an average decline of 40% in both foliar and soil drenching. Hence, we recommend the antagonistic bacterium B. subtilis for including as an IPM for the management of shot hole borer in tea.

在印度,射孔蛀虫(Euwallacea fornicates)俗称茶螟,在自然条件下侵染茶树枝干的廊道,是茶叶的主要害虫。本次研究的重点是枯草芽孢杆菌在两个不同气候条件的茶叶种植区直接抑制植物病原体生长的拮抗能力。评价结果表明:(a)枯草芽孢杆菌能直接抑制植物病原菌的生长;(b)在离体评价中,枯草芽孢杆菌抑制了伏甲镰刀菌的生长,而伏甲镰刀菌是伏甲的营养物;(c)还发现拮抗微生物和昆虫病原菌能控制茶叶射孔螟的害虫种群数量。在琼脂培养基中,观察了枯草芽孢杆菌对 F. ambrosium 的菌丝生长、孢子和孢子萌发的影响。在田间条件下进行的处理后评估显示,叶面和土壤淋洗平均减少了 40%。因此,我们建议将拮抗细菌枯草芽孢杆菌作为一种 IPM 用于茶叶射孔螟的管理。
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引用次数: 0
Effect of Acetic Acid on Biofilm Formation in Paracidovorax citrulli, Causal Agent of Bacterial Fruit Blotch. 醋酸对果实细菌性斑点病病原菌 Paracidovorax citrulli 生物膜形成的影响
IF 3.5 4区 生物学 Q2 MICROBIOLOGY Pub Date : 2024-10-20 DOI: 10.1002/jobm.202400188
Jincheng Yang, Liang Mao, Yousaf Gulfam, Muhammad Zeeshan, Xiaodong Wang, Ting Fan

The unique tissue structure of pathogenic bacteria biofilm plays an important role in its pathogenicity and bactericide resistance. Inhibition or destruction of biofilm formation of pathogenic bacteria is of great significance for the control of plant bacterial diseases. In this study, Paracidovorax citrulli was inoculated into KB medium containing acetic acid, and after shaking at 28°C and 55 r/min for 48 h, it was found that the content of extracellular polysaccharide, extracellular protein and extracellular DNA (eDNA) decreased with the increase of acetic acid concentration, which resulted in the decrease of biofilm formation, it is not even possible to form biofilms on plastic slides. When the final concentration of acetic acid in the culture medium was greater than or equal to 0.5 mg/mL, there was no biofilm on the plastic slides. Therefore, the use of acetic acid as an inhibitor of P. citrulli has a good potential for control of bacterial fruit blotch.

病原菌生物膜独特的组织结构对其致病性和对杀菌剂的抗性起着重要作用。抑制或破坏病原菌生物膜的形成对植物细菌病害的防治具有重要意义。本研究将 Paracidovorax citrulli 接种到含醋酸的 KB 培养基中,在 28℃、55 r/min 条件下振荡 48 h 后发现,随着醋酸浓度的增加,胞外多糖、胞外蛋白和胞外 DNA(eDNA)含量减少,导致生物膜形成减少,甚至无法在塑料载玻片上形成生物膜。当培养基中醋酸的最终浓度大于或等于 0.5 毫克/毫升时,塑料载玻片上没有生物膜。因此,使用醋酸作为柠檬褐斑病菌的抑制剂在控制细菌性果斑病方面具有良好的潜力。
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引用次数: 0
Exploring the Diversity, Root Colonization, and Morphology of Arbuscular Mycorrhizal Fungi in Lamiaceae. 探索唇形科植物中丛生菌根真菌的多样性、根部定殖和形态。
IF 3.5 4区 生物学 Q2 MICROBIOLOGY Pub Date : 2024-10-20 DOI: 10.1002/jobm.202400379
Kalpana Sharma, Meenakshi Singh, Devendra Kumar Srivastava, Pradeep Kumar Singh

This study aimed to explore the diversity, root morphology, and colonization of arbuscular mycorrhizal fungi (AMF) associated with eight medicinal plants of the Lamiaceae family. Rhizospheric soil and root samples were collected from eight species of Lamiaceae plants for AMF analysis. The results indicate that root colonization was not directly related to the number of AMF spores in the rhizosphere. However, a significant correlation was found between the percentage of root colonization and the number of AMF species present in the individual plants. The highest percentage of colonization (86.67 ± 1.92%) and the greatest number of AMF species were observed in Micromeria fructicosa, while the lowest colonization (27.67 ± 6.22%) was recorded in Mentha arvensis. The highest spore count was recorded in Thymus vulgaris (120 ± 27.01), whereas the lowest was found in Melissa officinalis (84 ± 17.20). Among the identified AMF species, Glomus was the most dominant, representing 35.7% of all AMF species across the eight medicinal plants. The maximum AMF spore density was observed in M. fructicosa and lowest in M. arvensis. The study suggests that AMF can significantly enhance medicinal plant growth by ensuring a consistent supply of nutrients and water, thereby supporting the sustainable cultivation of medicinal plants to meet the growing demand.

本研究旨在探索与拉米亚科八种药用植物相关的丛枝菌根真菌(AMF)的多样性、根系形态和定植情况。研究人员采集了八种拉米亚科植物的根瘤土壤和根部样本,对其进行了AMF分析。结果表明,根部定殖与根圈中的 AMF 孢子数量没有直接关系。不过,根部定殖率与单株植物中存在的 AMF 种类数量之间存在明显的相关性。果小蓟的定殖率最高(86.67 ± 1.92%),AMF 种类数量也最多,而薄荷的定殖率最低(27.67 ± 6.22%)。百里香的孢子数量最多(120 ± 27.01),而香蜂草的孢子数量最少(84 ± 17.20)。在已鉴定的 AMF 物种中,Glomus 是最主要的,占八种药用植物所有 AMF 物种的 35.7%。在果味草中观察到的 AMF 孢子密度最大,而在 arvensis 中最低。这项研究表明,AMF 可以通过确保稳定的养分和水分供应,显著促进药用植物的生长,从而支持药用植物的可持续栽培,满足日益增长的需求。
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引用次数: 0
Polysaccharides and Peptides With Wound Healing Activity From Bacteria and Fungi. 细菌和真菌中具有伤口愈合活性的多糖和肽。
IF 3.5 4区 生物学 Q2 MICROBIOLOGY Pub Date : 2024-10-16 DOI: 10.1002/jobm.202400510
Nazli Pinar Arslan, Tugba Orak, Aysenur Ozdemir, Ramazan Altun, Nevzat Esim, Elvan Eroglu, Sinem Ilayda Karaagac, Cigdem Aktas, Mesut Taskin

Bacteria and fungi are natural sources of metabolites exhibiting diverse bioactive properties such as wound healing, antioxidative, antibacterial, antifungal, anti-inflammatory, antidiabetic, and anticancer activities. Two important groups of bacteria or fungi-derived metabolites with wound-healing potential are polysaccharides and peptides. In addition to bacteria-derived cellulose and hyaluronic acid and fungi-derived chitin and chitosan, these organisms also produce different polysaccharides (e.g., exopolysaccharides) with wound-healing potential. The most commonly used bacterial peptides in wound healing studies are bacteriocins and lipopeptides. Bacteria or fungi-derived polysaccharides and peptides exhibit both the in vitro and the in vivo wound healing potency. In the in vivo models, including animals and humans, these metabolites positively affect wound healing by inhibiting pathogens, exhibiting antioxidant activity, modulating inflammatory response, moisturizing the wound environment, promoting the proliferation and migration of fibroblasts and keratinocytes, increasing collagen synthesis, re-epithelialization, and angiogenesis. Therefore, peptides and polysaccharides derived from bacteria and fungi have medicinal importance. This study aims to overview current literature knowledge (especially within the past 5 years) on the in vitro and in vivo wound repair potentials of polysaccharides and peptides obtained from bacteria (Actinobacteria, Bacteroidetes, Cyanobacteria, Firmicutes, and Proteobacteria) and fungi (yeasts, filamentous microfungi, and mushrooms).

细菌和真菌是多种代谢物的天然来源,它们具有多种生物活性,如伤口愈合、抗氧化、抗菌、抗真菌、消炎、抗糖尿病和抗癌活性。多糖和肽是细菌或真菌产生的具有伤口愈合潜力的两类重要代谢物。除了细菌产生的纤维素和透明质酸以及真菌产生的几丁质和壳聚糖外,这些生物还产生不同的具有伤口愈合潜能的多糖(如外多糖)。伤口愈合研究中最常用的细菌肽是细菌素和脂肽。细菌或真菌衍生的多糖和肽具有体外和体内伤口愈合能力。在包括动物和人体在内的体内模型中,这些代谢物通过抑制病原体、抗氧化、调节炎症反应、保湿伤口环境、促进成纤维细胞和角质细胞的增殖和迁移、增加胶原蛋白合成、再上皮化和血管生成,对伤口愈合产生积极影响。因此,从细菌和真菌中提取的肽和多糖具有重要的药用价值。本研究旨在概述目前有关从细菌(放线菌、类杆菌、蓝藻菌、真菌和蛋白菌)和真菌(酵母菌、丝状微真菌和蘑菇)中提取的多糖和肽的体外和体内伤口修复潜力的文献知识(尤其是过去 5 年内的知识)。
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引用次数: 0
Sporosarcina hypophthalmichthys sp. nov. Isolated From Gastrointestinal Tract of Fish Hypophthalmichthys molitrix (Valenciennes, 1844). Sporosarcina hypophthalmichthys sp.
IF 3.5 4区 生物学 Q2 MICROBIOLOGY Pub Date : 2024-10-13 DOI: 10.1002/jobm.202400226
Meghali Bharti, Monika Sharma, Stanzin Choksket, Himani Khurana, Sneha Siwach, Sonakshi Modeel, Suresh Korpole, Ram Krishan Negi

A rod-shaped, motile, Gram-stain-positive bacterial strain RKN2T, was isolated from gut of silver carp (Hypophthalmichthys molitrix) residing in Gobindsagar reservoir, Himachal Pradesh, India. Having the greatest sequence similarity to Sporosarcina koreensis F73T (98.51%), Sporosarcina luteola Y1T (98.4%) and Sporosarcina aquimarina SW28T (98.36%), the 16S rRNA gene phylogeny confirmed the belonging of strain RKN2T to genus Sporosarcina. Digital DNA-DNA hybridization values were 21.7%, 20.6%, and 19.2%, and average nucleotide identity values were 76.42%, 80.16%, 76.51%, of strain RKN2T with Sporosarcina koreensis F73T, Sporosarcina luteola Y1T, and Sporosarcina aquimarina SW28T, respectively. The genomic analysis of strain RKN2T showed various biological properties including nitrate reduction, genes responsible for carbohydrate-active enzymes production, antimicrobial compounds, as well as potential metabolism of aromatic compounds and heavy metals. G+C composition of RKN2T genome was 52.7%. This strain can grow in temperatures between 10°C and 40°C (optimum, 28°C-30°C), NaCl concentrations up to 6.0% (w/v), and 6.0-8.0 (optimum, 6.5-7.5) pH range. MK-7 was the dominant respiratory quinone, A-4 type cell wall peptidoglycan was present with anteiso-C15:0, iso-C15: 0, and anteiso-C17:0 being the major fatty acids and Lys-Glu being main amino acids. Diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine were the strain RKN2T's three main polar lipids. The strain is a novel species under genus Sporosarcina based on polyphasic approach and the name Sporosarcina hypophthalmichthys sp. nov. is given for strain RKN2T. RKN2T is a type strain (= MCC 4365T = JCM34522T = CCM9112T).

从印度喜马偕尔邦 Gobindsagar 水库中的鲢鱼(Hypophthalmichthys molitrix)肠道中分离出了一株杆状、运动、革兰氏染色阳性细菌 RKN2T。该菌株与 Sporosarcina koreensis F73T(98.51%)、Sporosarcina luteola Y1T(98.4%)和 Sporosarcina aquimarina SW28T(98.36%)的序列相似度最高,16S rRNA 基因系统进化证实 RKN2T 菌株属于 Sporosarcina 属。RKN2T 与 Sporosarcina koreensis F73T、Sporosarcina luteola Y1T 和 Sporosarcina aquimarina SW28T 的数字 DNA-DNA 杂交值分别为 21.7%、20.6% 和 19.2%,平均核苷酸同一性值分别为 76.42%、80.16% 和 76.51%。菌株 RKN2T 的基因组分析表明其具有多种生物特性,包括硝酸盐还原性、产生碳水化合物活性酶的基因、抗菌化合物以及潜在的芳香化合物和重金属代谢。RKN2T 基因组的 G+C 组成为 52.7%。该菌株可在 10°C 至 40°C(最适温度为 28°C-30°C)、NaCl 浓度高达 6.0%(w/v)和 6.0-8.0 (最适温度为 6.5-7.5)的 pH 值范围内生长。MK-7是主要的呼吸醌,细胞壁肽聚糖为A-4型,主要脂肪酸为前-C15:0、异-C15:0和前-C17:0,主要氨基酸为Lys-Glu。二磷脂酰甘油、磷脂酰甘油和磷脂酰乙醇胺是 RKN2T 菌株的三种主要极性脂质。根据多相学方法,该菌株是孢子瓢虫属(Sporosarcina)的一个新物种,并将 RKN2T 菌株命名为 Sporosarcina hypophthalmichthys sp.RKN2T 为模式菌株(= MCC 4365T = JCM34522T = CCM9112T)。
{"title":"Sporosarcina hypophthalmichthys sp. nov. Isolated From Gastrointestinal Tract of Fish Hypophthalmichthys molitrix (Valenciennes, 1844).","authors":"Meghali Bharti, Monika Sharma, Stanzin Choksket, Himani Khurana, Sneha Siwach, Sonakshi Modeel, Suresh Korpole, Ram Krishan Negi","doi":"10.1002/jobm.202400226","DOIUrl":"https://doi.org/10.1002/jobm.202400226","url":null,"abstract":"<p><p>A rod-shaped, motile, Gram-stain-positive bacterial strain RKN2<sup>T</sup>, was isolated from gut of silver carp (Hypophthalmichthys molitrix) residing in Gobindsagar reservoir, Himachal Pradesh, India. Having the greatest sequence similarity to Sporosarcina koreensis F73<sup>T</sup> (98.51%), Sporosarcina luteola Y1<sup>T</sup> (98.4%) and Sporosarcina aquimarina SW28<sup>T</sup> (98.36%), the 16S rRNA gene phylogeny confirmed the belonging of strain RKN2<sup>T</sup> to genus Sporosarcina. Digital DNA-DNA hybridization values were 21.7%, 20.6%, and 19.2%, and average nucleotide identity values were 76.42%, 80.16%, 76.51%, of strain RKN2<sup>T</sup> with Sporosarcina koreensis F73<sup>T</sup>, Sporosarcina luteola Y1<sup>T</sup>, and Sporosarcina aquimarina SW28<sup>T</sup>, respectively. The genomic analysis of strain RKN2<sup>T</sup> showed various biological properties including nitrate reduction, genes responsible for carbohydrate-active enzymes production, antimicrobial compounds, as well as potential metabolism of aromatic compounds and heavy metals. G+C composition of RKN2<sup>T</sup> genome was 52.7%. This strain can grow in temperatures between 10°C and 40°C (optimum, 28°C-30°C), NaCl concentrations up to 6.0% (w/v), and 6.0-8.0 (optimum, 6.5-7.5) pH range. MK-7 was the dominant respiratory quinone, A-4 type cell wall peptidoglycan was present with anteiso-C<sub>15:0</sub>, iso-C<sub>15: 0</sub>, and anteiso-C17:0 being the major fatty acids and Lys-Glu being main amino acids. Diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine were the strain RKN2<sup>T</sup>'s three main polar lipids. The strain is a novel species under genus Sporosarcina based on polyphasic approach and the name Sporosarcina hypophthalmichthys sp. nov. is given for strain RKN2<sup>T</sup>. RKN2<sup>T</sup> is a type strain (= MCC 4365<sup>T</sup> = JCM34522<sup>T</sup> = CCM9112<sup>T</sup>).</p>","PeriodicalId":15101,"journal":{"name":"Journal of Basic Microbiology","volume":null,"pages":null},"PeriodicalIF":3.5,"publicationDate":"2024-10-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142466170","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Advancing Anti-Biofilm Strategies: Innovations to Combat Biofilm-Related Challenges and Enhance Efficacy. 推进抗生物膜战略:应对生物膜相关挑战和提高疗效的创新方法。
IF 3.5 4区 生物学 Q2 MICROBIOLOGY Pub Date : 2024-10-11 DOI: 10.1002/jobm.202400271
Zahra Javanmard, Maryam Pourhajibagher, Abbas Bahador

Biofilms are complex communities of microorganisms that can cause significant challenges in various settings, including industrial processes, environmental systems, and human health. The protective nature of biofilms makes them resistant to traditional anti-biofilm strategies, such as chemical agents, mechanical interventions, and surface modifications. To address the limitations of conventional anti-biofilm methods, researchers have explored emerging strategies that encompass the use of natural compounds, nanotechnology-based methods, quorum-sensing inhibition, enzymatic degradation, and antimicrobial photodynamic/sonodynamic therapy. There is an increasing focus on combining multiple anti-biofilm strategies to combat resistance and enhance effectiveness. Researchers are continuously investigating the mechanisms of biofilm formation and developing innovative approaches to overcome the limitations of conventional anti-biofilm methods. These efforts aim to improve the management of biofilms and prevent infections while preserving the environment. This study provides a comprehensive overview of the latest advancements in anti-biofilm strategies. Given the dynamic nature of this field, exploring new approaches is essential to stimulate further research and development initiatives. The effective management of biofilms is crucial for maintaining the health of industrial processes, environmental systems, and human populations.

生物膜是一种复杂的微生物群落,可在各种环境中造成重大挑战,包括工业流程、环境系统和人类健康。生物膜的保护特性使其对化学制剂、机械干预和表面改造等传统抗生物膜策略具有抵抗力。为了解决传统抗生物膜方法的局限性,研究人员探索了一些新兴策略,包括使用天然化合物、基于纳米技术的方法、法定量感应抑制、酶降解和抗菌光动力/声动力疗法。人们越来越重视将多种抗生物膜策略结合起来,以对抗抗药性并提高有效性。研究人员正在不断研究生物膜的形成机制,并开发创新方法来克服传统抗生物膜方法的局限性。这些努力旨在改善生物膜的管理,预防感染,同时保护环境。本研究全面概述了抗生物膜策略的最新进展。鉴于该领域的动态性质,探索新方法对于促进进一步的研发活动至关重要。有效管理生物膜对于维护工业流程、环境系统和人类健康至关重要。
{"title":"Advancing Anti-Biofilm Strategies: Innovations to Combat Biofilm-Related Challenges and Enhance Efficacy.","authors":"Zahra Javanmard, Maryam Pourhajibagher, Abbas Bahador","doi":"10.1002/jobm.202400271","DOIUrl":"https://doi.org/10.1002/jobm.202400271","url":null,"abstract":"<p><p>Biofilms are complex communities of microorganisms that can cause significant challenges in various settings, including industrial processes, environmental systems, and human health. The protective nature of biofilms makes them resistant to traditional anti-biofilm strategies, such as chemical agents, mechanical interventions, and surface modifications. To address the limitations of conventional anti-biofilm methods, researchers have explored emerging strategies that encompass the use of natural compounds, nanotechnology-based methods, quorum-sensing inhibition, enzymatic degradation, and antimicrobial photodynamic/sonodynamic therapy. There is an increasing focus on combining multiple anti-biofilm strategies to combat resistance and enhance effectiveness. Researchers are continuously investigating the mechanisms of biofilm formation and developing innovative approaches to overcome the limitations of conventional anti-biofilm methods. These efforts aim to improve the management of biofilms and prevent infections while preserving the environment. This study provides a comprehensive overview of the latest advancements in anti-biofilm strategies. Given the dynamic nature of this field, exploring new approaches is essential to stimulate further research and development initiatives. The effective management of biofilms is crucial for maintaining the health of industrial processes, environmental systems, and human populations.</p>","PeriodicalId":15101,"journal":{"name":"Journal of Basic Microbiology","volume":null,"pages":null},"PeriodicalIF":3.5,"publicationDate":"2024-10-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142400358","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Journal of Basic Microbiology
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