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Cancer model and its possible control—A Z-type control approach 癌症模型及其可能的控制--Z 型控制方法
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-08-13 DOI: 10.1016/j.mex.2024.102895

This paper investigates the dynamics of a three-dimensional nonlinear cancer model involving interactions among cancer cells, normal cells, and immune cells. By performing a linear stability analysis of the equilibria and investigating the Hopf bifurcation in relation to the immune cell growth rate, we reveal the possibility of chaotic behavior when radiation is absent. However, with the appropriate implementation of radiotherapy, the cancer model demonstrates stable solutions, transitioning from chaotic oscillations through period-halving bifurcation. Additionally, we propose and examine an indirect Z-control mechanism within the cancer model. Our findings indicate that using the indirect Z-controller on the immune population successfully manages chaos and adjusts the cancer cell density to a desired level. Through extensive investigation, we demonstrate the robustness of the Z-controller in managing oscillations and provide insights into determining the minimum number of immune cells needed to achieve a predetermined cancer cell density. This study underscores the importance of control mechanisms in mitigating cancer progression and highlights the potential of Z-control for therapeutic intervention strategies.

本文研究了涉及癌细胞、正常细胞和免疫细胞之间相互作用的三维非线性癌症模型的动力学。通过对平衡点进行线性稳定性分析,并研究与免疫细胞增长率相关的霍普夫分岔,我们揭示了在没有辐射时出现混沌行为的可能性。然而,在适当实施放射治疗的情况下,癌症模型表现出稳定的解,从混沌振荡过渡到周期-霍普夫分岔。此外,我们还提出并研究了癌症模型中的间接 Z 控制机制。我们的研究结果表明,在免疫群体中使用间接 Z 控制机制可以成功控制混乱,并将癌细胞密度调整到理想水平。通过广泛的研究,我们证明了 Z 控制器在管理振荡方面的稳健性,并为确定达到预定癌细胞密度所需的最小免疫细胞数量提供了见解。这项研究强调了控制机制在缓解癌症进展方面的重要性,并突出了 Z 控制在治疗干预策略方面的潜力。
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引用次数: 0
DisclosuR: Advancing firm communication analysis through an innovative R package for enhanced textual insights DisclosuR:通过创新的 R 软件包推进公司传播分析,增强文本洞察力
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-08-13 DOI: 10.1016/j.mex.2024.102909

Firm and executive written communication allows researchers to explore firm strategy and executive personality. Two data sources have received increased interest in this matter: firm press releases and earnings call transcripts. However, while researchers can obtain these data sources through services like LexisNexis, they often come in unstructured formats that do not directly allow fine-grained quantitative analysis through statistical software. To address this challenge, we developed disclosuR, an innovative R package that transforms unstructured PDF press releases and earnings call transcripts into structured data frames, facilitating advanced text analysis. disclosuR stands out by providing unique features such as speaker-level language analysis and identifying temporal communication patterns within press releases. These functionalities empower researchers to conduct granular and reproducible quantitative analyses, significantly advancing the management literature. By enabling the seamless integration of text data into R, our package not only enhances the reproducibility of social science research but also opens new avenues for examining executive communication dynamics and strategic firm disclosures.

  • Convert LexisNexis PDFs to structured R data frames

  • Standardize text analysis of firm communication

公司和高管的书面交流使研究人员能够探索公司战略和高管个性。在这方面,有两个数据源受到越来越多的关注:公司新闻稿和收益电话记录。然而,虽然研究人员可以通过 LexisNexis 等服务获取这些数据源,但它们通常采用非结构化格式,无法直接通过统计软件进行精细的定量分析。为了应对这一挑战,我们开发了一个创新的 R 软件包 disclosuR,它能将非结构化的 PDF 新闻稿和盈利电话会议记录转化为结构化的数据框架,便于进行高级文本分析。这些功能使研究人员能够进行精细和可重复的定量分析,极大地推动了管理文献的发展。通过将文本数据无缝集成到 R 中,我们的软件包不仅提高了社会科学研究的可重复性,还为研究高管沟通动态和公司战略披露开辟了新途径。
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引用次数: 0
The DECISION project: DiscrEte Choice experIment Spinal manipulative therapy for lOw back paiN: A study protocol DECISION 项目:脊柱手法疗法治疗腰背痛:研究方案
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-08-13 DOI: 10.1016/j.mex.2024.102908

The smallest worthwhile effect (SWE) is the smallest beneficial effect of an intervention that justifies the costs, risks, and inconveniences. The objective is to establish the SWE of spinal manipulative therapy (SMT) for the treatment of low back pain (LBP), and to gain insight into how different attributes of the treatment are traded among each other when choosing SMT. Part 1. A mixed-methods study will be conducted to establish and prioritize a list of attributes influencing choices for those who consider SMT for the treatment of LBP. Individual interviews and consensus groups with chiropractors, manual therapists, and osteopaths and their patients will be conducted. Interviews and consensus groups will be voice-recorded and transcribed verbatim. Part 2. A Discrete Choice Experiment (DCE) will be conducted among people with LBP who have limited to no experience with SMT. Participants will be recruited through an online independent panel company. The survey will consist of several choice sets with attributes and their levels established from Part 1. The DCE will be preceded by a short survey to understand the clinical aspects (i.e. presentation, history and previous treatment for LBP) as well as socio-demographic characteristics of the participants.

最小值得效应(SWE)是指一项干预措施所产生的最小有益效应,该效应足以证明其成本、风险和不便是合理的。本研究旨在确定脊柱手法治疗(SMT)治疗腰背痛(LBP)的最小值得效应(SWE),并深入了解在选择脊柱手法治疗时如何对治疗的不同属性进行权衡。第 1 部分.将开展一项混合方法研究,以确定影响那些考虑采用 SMT 治疗腰背痛的人的选择的属性列表,并对其进行优先排序。将对脊骨神经科医生、手法治疗师、骨科医生及其患者进行个人访谈和共识小组讨论。访谈和共识小组将进行录音和逐字记录。第二部分:离散选择实验离散选择实验 (DCE) 将在对 SMT 经验有限或毫无经验的 LBP 患者中进行。参与者将通过一家在线独立小组公司招募。调查将由几个选择集组成,属性及其等级由第 1 部分确定。在进行 DCE 之前,将先进行一项简短的调查,以了解参与者的临床情况(即表现、病史和以前的腰椎间盘突出症治疗情况)以及社会人口特征。
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引用次数: 0
Development and validation of a web application to collect food supply data associated with their nutritional composition and environmental impacts 开发和验证网络应用程序,收集与营养成分和环境影响相关的食品供应数据
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-08-13 DOI: 10.1016/j.mex.2024.102891

Measuring what people eat is a major methodological challenge. We developed and validated a new web-based method to record actual food supply data that would be less time consuming than the original method (i.e., food supply diary). Through the COD-Appro web application, participants can enter their food supplies by selecting a food item from a list based on items included in French food databases; thus automatically associated with nutrient composition and environmental impacts data. We recruited 102 participants who used COD-Appro during one month, among which 30 also used a classical paper-based food supply diary to be able to compare the two methods. A feedback questionnaire was completed by all the participants. The two methods showed no difference between the price and the quantity of food purchases when compared by food groups (n = 10) which confirms that the new method was robust compared to the original method. In addition, participants reported good usability of the COD-Appro web application and its use saved a considerable amount of time to the experimenters by integrating data entry and pairing with food databases (nutrient composition and environmental impacts) into the data collection step performed by the participants themselves.

  • Web-based food supply data collection

  • Association with nutrient composition and environmental impacts

  • External validity compared to original method (i.e., food supply diary)

测量人们的饮食是一项重大的方法挑战。我们开发并验证了一种新的网络方法来记录实际的食物供应数据,这种方法比原来的方法(即食物供应日记)更省时。通过 COD-Appro 网络应用程序,参与者可以根据法国食品数据库中的项目,从列表中选择食品,输入他们的食品供应量,从而自动关联营养成分和环境影响数据。我们招募了 102 名参与者,他们在一个月内使用了 COD-Appro,其中 30 人还使用了传统的纸质食物供应日记,以便对两种方法进行比较。所有参与者都填写了反馈问卷。两种方法在按食品类别进行比较时,在购买食品的价格和数量上没有差异(n = 10),这证明新方法比原来的方法更可靠。此外,参与者反映 COD-Appro 网络应用程序的可用性很好,通过将数据输入和与食品数据库(营养成分和环境影响)配对整合到参与者自己进行的数据收集步骤中,使用该程序为实验人员节省了大量时间。
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引用次数: 0
Standardized intermittent shoreline boat electrofishing for slow-flowing rivers in Sweden 瑞典慢流河流的标准化间歇性海岸线船电鱼法
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-08-13 DOI: 10.1016/j.mex.2024.102907

Electrofishing is a common method for sampling fish in rivers. In Sweden, electrofishing has a long history, dating back to the 1950s, but the vast majority of surveys have been conducted by wading in shallow river stretches, leaving a data gap for non-wadable rivers. Boat electrofishing allows for surveys in deeper river sections, but limited numbers of operational electrofishing boats have led to standardisation of methods not being prioritized within Swedish water management. This method protocol describes the first Swedish standardised method for boat electrofishing, based on intermittent shoreline sampling in larger slow-flowing rivers. The paper describes:

  • General methodology for boat electrofishing operation

  • Data collection protocols

  • Discussion of current caveats for the method

In the future, the methodology will be amended to cover a wider array of river types (e.g. faster flowing river sections). Hence, readers are advised to look for updates to the protocol.
电鱼是一种常见的河流鱼类取样方法。在瑞典,电鱼的历史可以追溯到 20 世纪 50 年代,但绝大多数调查都是在浅水河段涉水进行的,因此无法涉水的河流存在数据空白。电鱼船可以在较深的河段进行调查,但由于可操作的电鱼船数量有限,导致瑞典水管理部门没有优先考虑方法的标准化。本方法规程介绍了瑞典首个标准化的船载电鱼方法,该方法基于在较大的缓流河流中进行间歇性海岸线取样。本文介绍了: - 船用电鱼操作的一般方法 - 数据收集规程 - 讨论该方法当前的注意事项。未来,该方法将进行修订,以涵盖更广泛的河流类型(如流速较快的河段)。因此,建议读者关注协议的更新。
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引用次数: 0
IoT-enabled effective real-time water quality monitoring method for aquaculture 物联网支持的有效水产养殖水质实时监测方法
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-08-13 DOI: 10.1016/j.mex.2024.102906

Aquaculture is growing industry from the perspective of sustainable food fulfillment and county's economic development. Technology oriented aquafarming is the solution for effective water quality monitoring and high yield production. Internet of Things (IoT) integrated aquaculture can cater to such requirements. This research article introduces a comprehensive method aimed at seamlessly incorporate IoT sensors into aquafarming environments, utilizing Arduino boards and communication modules. The proposed method measures accurate water quality parameters, such as temperature, pH levels, and Dissolved Oxygen (DO), which are essential for maintaining optimal conditions for suitable aquaculture environment. This method enables the real-time collection of critical data points that are essential prevent fish diseases and mortality with low human intervention and maintenance cost. The key contributions of the methodology are mentioned below.

  • Design and development of a compact and efficient Printed Circuit Board (PCB) to achieve accurate sensor data readings and reliable communication in an aqua environment.

  • Prevent fish disease and mortality rate through data-driven decision incorporating correlation of DO, pH, and temperature sensor data.

  • Conducted instrument calibration checks and cross-validated automated system data with manual observations through repeatability tests to ensure precise measurements of sensor parameters.

从可持续粮食供应和县域经济发展的角度来看,水产养殖是一个不断发展的产业。以技术为导向的水产养殖是有效监测水质和实现高产的解决方案。物联网(IoT)集成水产养殖可以满足这些要求。本研究文章介绍了一种综合方法,旨在利用 Arduino 板和通信模块将物联网传感器无缝集成到水产养殖环境中。所提出的方法可测量精确的水质参数,如温度、pH 值和溶解氧(DO),这些参数对于维持适宜的水产养殖环境的最佳条件至关重要。该方法能够实时收集关键数据点,这些数据点对预防鱼类疾病和死亡至关重要,而且人工干预和维护成本低。该方法的主要贡献如下:-设计和开发了紧凑高效的印刷电路板(PCB),以实现水产环境中精确的传感器数据读数和可靠的通信。-通过数据驱动决策,结合溶解氧、pH 值和温度传感器数据的相关性,预防鱼类疾病和死亡率。
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引用次数: 0
A simple method to assess flood regulation supply in urban lawns 评估城市草坪洪水调节供应的简单方法
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-08-13 DOI: 10.1016/j.mex.2024.102905

Floods have an important impact on life and loss of goods. Urban green spaces are crucial to mitigating flood impact. However, their capacity to prevent floods depends on their condition, especially in areas highly affected by human activities such as lawns. Here, we developed a simple method to assess flood regulation using soil penetration resistance as a proxy and tested it on an urban lawn in Vilnius (Lithuania) in winter. We developed an experimental design using an app for collecting data and working with it in a GIS environment. To understand their spatial relations, geostatistical (e.g., semi-variogram model and ordinary kriging mapping) and spatial statistics ((Moran's global autocorrelation index and Cluster and Outlier Analysis (Anselin Local Moran's I)) tools were applied. The preliminary results from the tested method showed that the lawn studied has different capacities to retain floods due to the management practices. Nevertheless, it is essential to be applied in different soil moisture conditions since flood regulation (soil penetration resistance) can be variable throughout the year.

  • A novel method was developed to estimate flood regulation using soil penetration resistance as a proxy;

  • An urban lawn was used to test the method and identify areas with low and high capacity for flood regulation;

  • The method quickly assesses lawn flood retention capacity in different environments.

洪水对生命和财产损失有着重大影响。城市绿地对于减轻洪水影响至关重要。然而,绿地的防洪能力取决于其状况,尤其是在草坪等受人类活动影响较大的区域。在此,我们开发了一种以土壤渗透阻力为代表的简单方法来评估洪水调节能力,并在立陶宛维尔纽斯冬季的城市草坪上进行了测试。我们开发了一个实验设计,使用一个应用程序来收集数据,并在 GIS 环境中进行处理。为了了解它们之间的空间关系,我们使用了地质统计(如半变异图模型和普通克里金制图)和空间统计(莫兰全球自相关指数和聚类与离群值分析(安塞林当地莫兰指数 I))工具。测试方法的初步结果表明,由于管理方法的不同,所研究的草地具有不同的洪水滞留能力。尽管如此,由于洪水调节能力(土壤渗透阻力)全年都可能变化,因此必须在不同的土壤湿度条件下使用该方法。-开发了一种新方法,以土壤渗透阻力为替代物估算洪水调节能力;-使用城市草坪测试该方法,确定洪水调节能力低和高的区域;-该方法可快速评估不同环境下草坪的洪水滞留能力。
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引用次数: 0
Spatial clustering based on geographically weighted multivariate generalized gamma regression 基于地理加权多变量广义伽马回归的空间聚类法
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-08-10 DOI: 10.1016/j.mex.2024.102903

Geographically Weighted Regression (GWR) is one of the local statistical models that can capture the effects of spatial heterogeneity. This model can be used for both univariate and multivariate responses. However, it should be noted that GWR models require the assumption of error normality. To overcome this problem, we propose a GWR model for generalized gamma distributed responses that can capture the phenomenon of some special continuous distributions. The proposed model is known as Geographically Weighted Multivariate Generalized Gamma Regression (GWMGGR). Parameter estimation is performed using the Maximum Likelihood Estimation (MLE) method optimized with the Bernt-Hall-Hall-Haussman (BHHH) algorithm. To determine the significance of the spatial heterogeneity effect, a hypothesis test was conducted using the Maximum Likelihood Ratio Test (MLRT) approach. We made a spatial cluster based on the estimated model parameters for each response using the k-means clustering method to interpret the obtained results. Some highlights of the proposed method are:

  • A new model for GWR with multivariate generalized gamma distributed responses to overcome the assumption of normally distributed errors.

  • Goodness of fit test to test the spatial effects in GWMGGR model.

  • Spatial clustering of districts/cities in Central Java based on three dimensions of educational indicators.

地理加权回归(GWR)是能够捕捉空间异质性影响的本地统计模型之一。该模型可用于单变量和多变量响应。但需要注意的是,GWR 模型需要假定误差正态性。为了克服这个问题,我们提出了一个广义伽马分布响应的 GWR 模型,它可以捕捉一些特殊连续分布的现象。该模型被称为地理加权多变量广义伽马回归模型(GWMGGR)。参数估计采用最大似然估计(MLE)方法,并使用 Bernt-Hall-Hall-Haussman (BHHH) 算法进行优化。为了确定空间异质性效应的显著性,我们使用最大似然比检验(MLRT)方法进行了假设检验。我们根据每个响应的估计模型参数,使用 k-means 聚类方法进行了空间聚类,以解释所得结果。所提方法的一些亮点如下:-采用多元广义伽马分布响应的 GWR 新模型,克服了正态分布误差的假设;-拟合优度检验,检验 GWMGGR 模型中的空间效应;-根据教育指标的三个维度,对中爪哇的地区/城市进行空间聚类。
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引用次数: 0
Preparing eugregarine parasites and their cricket host Acheta domesticus as a model for gregarine infection studies 准备将蛞蝓寄生虫及其宿主蟋蟀(Acheta domesticus)作为蛞蝓感染研究的模型
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-08-10 DOI: 10.1016/j.mex.2024.102888

The increasing global demand for house crickets (Acheta domesticus) necessitates effective health measures. Despite their abundance, the effects of gregarines on these hosts remain underexplored. We present a method for controlled gregarine infection and maintenance of gregarine-free cricket populations. This system, adapted from prior work, is essential for experiments on gregarine infection dynamics, providing insights into parasite evolution and host-parasite interactions within the Apicomplexa group. This protocol includes rearing and maintenance of gregarine-free cricket populations for experimental purposes, gregarine production for oocyst solution and cricket infection, and gregarine infection assessment.

全球对家养蟋蟀(Acheta domesticus)的需求日益增长,因此有必要采取有效的健康措施。尽管蟋蟀数量众多,但蝼蛄对这些宿主的影响仍未得到充分探索。我们提出了一种控制蝼蛄感染和维持无蝼蛄种群的方法。该系统改编自之前的工作,对于伽马虫感染动力学实验至关重要,可帮助深入了解寄生虫的进化以及寄主与寄生虫之间的相互作用。该方案包括为实验目的饲养和维持无雄蕊蟋蟀种群、生产用于卵囊溶液和蟋蟀感染的雄蕊,以及雄蕊感染评估。
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引用次数: 0
Improved and easy method for long-term in vitro culture of rumen ciliates Dasytricha ruminantium 瘤胃纤毛虫 Dasytricha ruminantium 长期体外培养的改进型简便方法
IF 1.6 Q2 MULTIDISCIPLINARY SCIENCES Pub Date : 2024-08-10 DOI: 10.1016/j.mex.2024.102902

The rumen ciliates are a diverse group of protozoa residing in the rumen of ruminant animals. They are primarily found in the orders Entodiniomorphida and Vestibuliferida, playing crucial roles in the digestion and breakdown of feed within the host's rumen, closely intertwined with the host's nutrient absorption. In vitro monocultures of representatives of rumen ciliates are important to better study them. So far, Entodinium caudatum and Epidinium caudatum, representatives of the order Entodiniomorphida, have been successfully cultivated as a monoculture in vitro. However, for the order Vestibuliferida, no representative species has been established a stable monoculture in vitro up to date, which hampers to study their physiology and metabolism. Therefore, we have developed a simple method for the in vitro cultivation of Dasytricha ruminantium, a representative rumen ciliate in the order Vestibuliferida. Utilizing an optimized culture medium with easily obtainable components, and the cultivation process is simple. This will facilitate further research in metabolism and other studies requiring large pure live materials.

  • 1.

    Filtration and separation for enriching D. ruminantium.

  • 2.

    A culture medium (DRM) suitable for the growth of D. ruminantium, with easily obtainable components.

  • 3.

    Simple cultivation process, facilitating the obtainment of a large number of monocultured D. ruminantium.

瘤胃纤毛虫是居住在反刍动物瘤胃中的一类多种多样的原生动物。它们主要分布在 Entodiniomorphida 和 Vestibuliferida 目中,在宿主瘤胃内消化和分解饲料的过程中发挥着至关重要的作用,与宿主的营养吸收密切相关。瘤胃纤毛虫代表的离体单培养对于更好地研究它们非常重要。迄今为止,Entodinium caudatum 和 Epidinium caudatum(Entodiniomorphida 目纤毛虫的代表)已经成功地进行了体外单一培养。然而,迄今为止,Vestibuliferida 目还没有一个代表物种在体外建立了稳定的单一栽培,这阻碍了对其生理和代谢的研究。因此,我们开发了一种体外培养瘤胃纤毛虫(Dasytricha ruminantium)的简单方法。该方法采用了易于获得的优化培养基,且培养过程简单。1.过滤和分离富集反刍动物。2.适合反刍动物生长的培养基(DRM),成分容易获得。3.培养过程简单,便于获得大量单培养的反刍动物。
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引用次数: 0
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