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Unique biogenesis and kinetics of hornwort Rubiscos revealed by synthetic biology systems. 合成生物学系统揭示了角草 Rubiscos 独特的生物生成和动力学过程。
IF 17.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-11-02 DOI: 10.1016/j.molp.2024.10.013
Zhen-Guo Oh, Tanner Ashton Robison, Dan-Hong Loh, Warren Shou Leong Ang, Jediael Ng, Fay-Wei Li, Laura Helen Gunn

Hornworts are the only land plants that employ a pyrenoid to optimize Rubisco's CO2 fixation. Yet, hornwort Rubisco remains poorly characterized. Here we assemble the hornwort Anthoceros agrestis Rubisco (AaRubisco) using the Arabidopsis thaliana SynBio expression system and observed the formation of stalled intermediates, prompting us to develop a new SynBio system with A. agrestis cognate chaperones. We successfully assembled AaRubisco and Rubisco from three other hornwort species. Unlike A. thaliana Rubisco, AaRubisco assembly is not dependent on RbcX or Raf2. Kinetic characterization reveals that hornwort Rubiscos exhibit a range of catalytic rates (3-10 s-1), but with similar affinity (∼30 μM) and specificity (∼70) for CO2. In other words, hornwort Rubiscos do not comply with the long held canonical catalytic trade-off observed in other land plants, providing experimental support that Rubisco kinetics may be phylogenetically constrained. Unexpectedly, we observed a 50% increase in AaRubisco catalytic rates when RbcX was removed from our SynBio system, without any reduction in specificity. Structural biology, biochemistry and proteomic analysis suggest that subtle differences in Rubisco large subunit interactions, when RbcX is absent during biogenesis, increases the accessibility of active sites and catalytic turnover rate. This study uncovered a previously unknown Rubisco kinetic parameter space and provides a SynBio chassis to expand the survey of other Rubisco kinetics. Our discovery could thus reshape the approaches for engineering Rubisco with superior kinetics.

角草是唯一利用类焦磷酸优化 Rubisco 固定二氧化碳的陆生植物。然而,角草 Rubisco 的特征仍然不甚明了。在这里,我们使用拟南芥 SynBio 表达系统组装了角草 Anthoceros agrestis Rubisco(AaRubisco),并观察到中间体停滞的形成,这促使我们开发一种带有 Agrestis 同源伴侣蛋白的新 SynBio 系统。我们成功地组装了 AaRubisco 和其他三个角草物种的 Rubisco。与 A. thaliana Rubisco 不同,AaRubisco 的组装不依赖于 RbcX 或 Raf2。动力学特性分析表明,角草 Rubiscos 表现出不同的催化速率(3-10 s-1),但对 CO2 具有相似的亲和力(∼30 μM)和特异性(∼70)。换句话说,角草 Rubiscos 并不符合长期以来在其他陆生植物中观察到的典型催化权衡,这为 Rubisco 动力学可能受系统发育制约提供了实验支持。意想不到的是,当 RbcX 从我们的 SynBio 系统中移除时,我们观察到 AaRubisco 的催化率提高了 50%,而特异性没有降低。结构生物学、生物化学和蛋白质组分析表明,当生物发生过程中没有 RbcX 时,Rubisco 大亚基相互作用的微妙差异会增加活性位点的可及性和催化周转率。这项研究发现了以前未知的 Rubisco 动力学参数空间,并提供了一个 SynBio 底盘来扩大对其他 Rubisco 动力学的研究。因此,我们的发现可能会重塑具有卓越动力学的 Rubisco 工程方法。
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引用次数: 0
Natural variation in maize ZmLecRK1 fine-tunes co-receptor interactions to boost immunity. 玉米 ZmLecRK1 的自然变异可微调共受体的相互作用,从而增强免疫力。
IF 17.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-30 DOI: 10.1016/j.molp.2024.10.012
Miguel-Ángel Torres, Lucía Jordá

Pattern recognition receptors (PRRs) are integral to plant immunity, functioning as the first line of defense against pathogens. Among these, receptor kinases (RKs) play a critical role in recognizing external signals and initiating immune responses. Recent studies by Li et al. (2024) have identified the G-type lectin receptor kinase ZmLecRK1 in maize as essential for resistance to Pythium aphanidermatum and other fungal pathogens. A key finding is that a resistant variant of ZmLecRK1, which carries an alanine at position 404, has emerged in maize, while the ancestral form, with a serine at this position, is conserved across most grasses. This amino acid substitution significantly influences the interaction with the co-receptor BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 (BAK1), enhancing immune complex formation and subsequent defense signaling. This work underscores the importance of genetic variation in enhancing disease resistance, offering potential strategies for crop improvement through targeted genetic modification.

模式识别受体(PRRs)是植物免疫不可或缺的组成部分,是抵御病原体的第一道防线。其中,受体激酶(RKs)在识别外部信号和启动免疫反应方面起着至关重要的作用。Li 等人(2024 年)的最新研究发现,玉米中的 G 型凝集素受体激酶 ZmLecRK1 对于抵抗 Pythium aphanidermatum 和其他真菌病原体至关重要。一个重要发现是,玉米中出现了一种抗性变体 ZmLecRK1,它在 404 位上带有一个丙氨酸,而在大多数禾本科植物中,在该位置上带有一个丝氨酸的祖先形式是保守的。这种氨基酸替换极大地影响了与共受体 BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1(BAK1)的相互作用,增强了免疫复合物的形成和随后的防御信号传递。这项研究强调了基因变异在增强抗病性方面的重要性,为通过有针对性的基因改造来改良作物提供了潜在的策略。
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引用次数: 0
SCOOP10 And SCOOP12 Peptides Act Through MIK2 Receptor-Like Kinase to Antagonistically Regulate Arabidopsis Leaf Senescence. SCOOP10 和 SCOOP12 肽通过 MIK2 受体样激酶拮抗拟南芥叶片衰老。
IF 17.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-28 DOI: 10.1016/j.molp.2024.10.010
Zhenbiao Zhang, Nora Gigli-Bisceglia, Wei Li, Saijie Li, Jie Wang, Junfeng Liu, Christa Testerink, Yongfeng Guo

Leaf senescence plays a critical role in a plant's overall reproductive success due to its involvement in nutrient remobilization and allocation. However, our current understanding of the molecular mechanisms controlling leaf senescence remains limited. In this study, we demonstrate that the receptor-like kinase MALE DISCOVERER 1-INTERACTING RECEPTOR-LIKE KINASE 2 (MIK2) functions as a negative regulator of leaf senescence. We report that the SERINE-RICH ENDOGENOUS PEPTIDE 12, previously known to physically interact with MIK2, competes with SCOOP10 to control MIK2-dependent senescence regulatory mechanisms. We observed that increased expression of SCOOP10 or the application of exogenous SCOOP10 peptides accelerated leaf senescence in a MIK2-dependent manner. Conversely, SCOOP12 acted as a suppressor of MIK2-dependent senescence regulation. We also found that SCOOP12 enhanced while SCOOP10 diminished MIK2 phosphorylation. Thus, the SCOOP12-MIK2 module might function antagonistically on SCOOP10-MIK2 signaling at late senescing stages, allowing for fine-tuned modulation of the leaf senescence process. Our research sheds light on the complex mechanisms underlying leaf senescence and provides valuable insights into the interplay between receptors, peptides, and the regulation of plant senescence.

叶片衰老参与养分再动员和分配,对植物的整体繁殖成功起着关键作用。然而,我们目前对控制叶片衰老的分子机制的了解仍然有限。在本研究中,我们证明了受体样激酶 MALE DISCOVERER 1-INTERACTING RECEPTOR-LIKE KINASE 2(MIK2)是叶片衰老的负调控因子。我们报告说,以前已知与 MIK2 有物理相互作用的ERINE-RICH ENDOGENOUS PEPTIDE 12 与 SCOOP10 竞争,共同控制 MIK2 依赖性衰老调控机制。我们观察到,增加 SCOOP10 的表达或应用外源 SCOOP10 肽会以 MIK2 依赖性的方式加速叶片衰老。相反,SCOOP12 则是 MIK2 依赖性衰老调控的抑制因子。我们还发现,SCOOP12 增强了 MIK2 磷酸化,而 SCOOP10 则减弱了 MIK2 磷酸化。因此,在衰老晚期,SCOOP12-MIK2 模块可能会对 SCOOP10-MIK2 信号转导起拮抗作用,从而对叶片衰老过程进行微调。我们的研究揭示了叶片衰老的复杂机制,并为受体、肽和植物衰老调控之间的相互作用提供了宝贵的见解。
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引用次数: 0
Heat stress-induced decapping of WUSCHEL mRNA enhances stem cell thermotolerance in Arabidopsis. 热胁迫诱导的 WUSCHEL mRNA 脱帽可增强拟南芥干细胞的耐热性。
IF 17.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-28 DOI: 10.1016/j.molp.2024.10.011
Sumei Liu, Haijun Wu, Zhong Zhao

The plasticity of stem cells in response to environmental change is critical for multicellular organisms. Here, we show that MYB3R-like directly activates the key plant stem cell regulator WUSCHEL (WUS) by recruiting the methyltransferase ROOT INITIATION DEFECTIVE 2 (RID2), which functions in m7G methylation at the 5' cap of WUS mRNA to protect it from degradation. We demonstrated that protein-folding genes are repressed by WUS to maintain precise protein synthesis in stem cells by preventing the reuse of misfolded proteins. However, upon heat stress, the MYB3R-like/RID2 module is repressed to reduce WUS transcripts via the decapping of nascent WUS mRNA. This releases the inhibition of protein folding capacity in stem cells and protects plant stem cells from heat-shock by eliminating misfolded protein aggregation. Our results reveal a tradeoff strategy in plants by reducing the accuracy of protein synthesis in exchange for the survival of stem cells at high temperatures.

干细胞对环境变化的可塑性对多细胞生物至关重要。在这里,我们发现MYB3R-like通过招募甲基转移酶ROOT INITIATION DEFECTIVE 2(RID2)直接激活了关键的植物干细胞调控因子WUSCHEL(WUS),RID2在WUS mRNA的5'帽处进行m7G甲基化以保护其不被降解。我们证明,蛋白质折叠基因受到WUS的抑制,通过防止错误折叠蛋白质的再利用来维持干细胞中精确的蛋白质合成。然而,在热应激时,MYB3R-like/RID2模块被抑制,通过新生WUS mRNA的脱帽作用减少WUS转录本。这解除了对干细胞蛋白质折叠能力的抑制,并通过消除错误折叠蛋白质的聚集,保护植物干细胞免受热休克的影响。我们的研究结果揭示了植物的一种权衡策略,即通过降低蛋白质合成的准确性来换取干细胞在高温下的存活。
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引用次数: 0
H2O2 sulfenylates CHE to activate systemic salicylic acid synthesis and ignite systemic acquired resistance. H2O2 亚磺酰化 CHE,激活全身水杨酸合成,点燃全身获得性抵抗。
IF 17.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-17 DOI: 10.1016/j.molp.2024.10.007
Kaihuai Li, Cheng Li, Daowen Wang, Fengquan Liu, Zheng Qing Fu
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引用次数: 0
Upland rice retains genetic elements conferring drought adaptation. 陆地水稻保留了赋予干旱适应性的遗传元素。
IF 17.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-11 DOI: 10.1016/j.molp.2024.10.006
Zeqi Li, Yi Zhang, Hao Du
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引用次数: 0
Increasing seed lint fiber density for promoting cotton yield: Opportunities and challenges. 提高籽棉纤维密度以提高棉花产量:机遇与挑战。
IF 17.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-07 Epub Date: 2024-09-02 DOI: 10.1016/j.molp.2024.08.010
Tianlun Zhao, Jinhong Chen, Shuijin Zhu, Qian-Hao Zhu
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引用次数: 0
Creation of folate-biofortified rice by simultaneously enhancing biosynthetic flux and blocking folate oxidation. 通过同时提高生物合成通量和阻止叶酸氧化,生产叶酸生物强化水稻。
IF 17.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-07 Epub Date: 2024-09-16 DOI: 10.1016/j.molp.2024.09.005
Qiuju Liang, Wei Zhang, Jianzhou Pang, Shuncong Zhang, Xiaowan Hou, Chunyi Zhang
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引用次数: 0
Efficient control of root-knot nematodes by expressing Bt nematicidal proteins in root leucoplasts. 通过在根白质中表达 Bt 杀线虫蛋白有效控制根结线虫。
IF 17.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-07 Epub Date: 2024-08-14 DOI: 10.1016/j.molp.2024.08.004
Yong Wang, Mengnan Wang, Yali Zhang, Longwei Peng, Dadong Dai, Fengjuan Zhang, Jiang Zhang

Root-knot nematodes (RKNs) are plant pests that infect the roots of host plants. Bacillus thuringiensis (Bt) nematicidal proteins exhibited toxicity to nematodes. However, the application of nematicidal proteins for plant protection is hampered by the lack of effective delivery systems in transgenic plants. In this study, we discovered the accumulation of leucoplasts (root plastids) in galls and RKN-induced giant cells. RKN infection causes the degradation of leucoplasts into small vesicle-like structures, which are responsible for delivering proteins to RKNs, as observed through confocal microscopy and immunoelectron microscopy. We showed that different-sized proteins from leucoplasts could be taken up by Meloidogyne incognita female. To further explore the potential applications of leucoplasts, we introduced the Bt crystal protein Cry5Ba2 into tobacco and tomato leucoplasts by fusing it with a transit peptide. The transgenic plants showed significant resistance to RKNs. Intriguingly, RKN females preferentially took up Cry5Ba2 protein when delivered through plastids rather than the cytosol. The decrease in progeny was positively correlated with the delivery efficiency of the nematicidal protein. In conclusion, this study offers new insights into the feeding behavior of RKNs and their ability to ingest leucoplast proteins, and demonstrates that root leucoplasts can be used for delivering nematicidal proteins, thereby offering a promising approach for nematode control.

根结线虫(RKNs)是一种感染寄主植物根部的植物害虫。苏云金芽孢杆菌(Bt)杀线虫蛋白对线虫具有毒性。然而,由于转基因植物缺乏有效的传递系统,杀线虫蛋白在植物保护中的应用受到阻碍。在这项研究中,我们发现在虫瘿和 RKN 诱导的巨细胞中积累了白质体(根质体)。通过共聚焦显微镜和免疫电镜观察,RKN 感染导致白质体降解为小囊泡状结构,负责向 RKN 运送蛋白质。我们还通过 Western 印迹分析进一步证明,白细胞中不同大小的蛋白质可被黑僵菌雌虫吸收。为了进一步探索白细胞的潜在应用,我们将 Bt 晶体蛋白 Cry5Ba2 与转运肽融合后导入烟草和番茄白细胞。由此产生的转基因植株对 RKN 具有显著的抗性。耐人寻味的是,当 Cry5Ba2 蛋白通过质体而不是细胞质传递时,RKN 雌虫会优先吸收它。后代产量的减少与杀线虫蛋白的传递效率呈正相关。总之,这项研究为了解 RKNs 的取食行为及其摄取白质体蛋白的能力提供了新的视角。此外,该研究还证明了白细胞作为杀线虫蛋白高效递送系统的潜在用途,为控制线虫提供了一种前景广阔的方法。
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引用次数: 0
The OsSRO1c-OsDREB2B complex undergoes protein phase transition to enhance cold tolerance in rice. OsSRO1c-OsDREB2B 复合物经历蛋白质相变以增强水稻的耐寒性。
IF 17.1 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-10-07 Epub Date: 2024-08-22 DOI: 10.1016/j.molp.2024.08.006
Dan Hu, Yilong Yao, Yan Lv, Jun You, Yu Zhang, Qingya Lv, Jiawei Li, Stephanie Hutin, Haiyan Xiong, Chloe Zubieta, Xuelei Lai, Lizhong Xiong

Cold stress is one of the major abiotic stress factors affecting rice growth and development, leading to significant yield loss in the context of global climate change. Exploring natural variants that confer cold resistance and the underlying molecular mechanism responsible for this is the major strategy to breed cold-tolerant rice varieties. Here, we show that natural variations of a SIMILAR to RCD ONE (SRO) gene, OsSRO1c, confer cold tolerance in rice at both seedling and booting stages. Our in vivo and in vitro experiments demonstrated that OsSRO1c possesses intrinsic liquid-liquid phase-separation ability and recruits OsDREB2B, an AP2/ERF transcription factor that functions as a positive regulator of cold stress, into its biomolecular condensates in the nucleus, resulting in elevated transcriptional activity of OsDREB2B. We found that the OsSRO1c-OsDREB2B complex directly responds to low temperature through dynamic phase transitions and regulates key cold-response genes, including COLD1. Furthermore, we showed that introgression of an elite haplotype of OsSRO1c into a cold-susceptible indica rice could significantly increase its cold resistance. Collectively, our work reveals a novel cold-tolerance regulatory module in rice and provides promising genetic targets for molecular breeding of cold-tolerant rice varieties.

冷胁迫是影响水稻生长发育的主要非生物胁迫因素之一,在全球气候变化的背景下会导致严重的产量损失。探索赋予抗寒性的天然变异及其潜在的分子机制是培育抗寒水稻品种的主要策略。在这里,我们发现一个与 RCD ONE 相似(SRO)基因 OsSRO1c 的天然变异在水稻幼苗和出苗阶段都具有抗寒性。OsSRO1c 在体内和体外都具有内在的液-液相分离能力,并能将 AP2/ERF 转录因子和冷胁迫正调控因子 OsDREB2B 募集到细胞核内的生物分子凝聚体中,从而提高 OsDREB2B 的转录活性。OsSRO1c-OsDREB2B 复合物通过动态相变直接响应低温,并调控包括 COLD1 在内的关键冷响应基因。此外,将 OsSRO1c 的精英单倍型导入到易感冷的籼稻中可显著提高其抗寒性。总之,我们的研究揭示了水稻中一个新的耐寒调控模块,为耐寒水稻品种的分子育种提供了有前景的遗传目标。
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Molecular Plant
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