Pub Date : 2024-10-01DOI: 10.1038/s41524-024-01411-6
Keith T. Butler, Kamal Choudhary, Gabor Csanyi, Alex M. Ganose, Sergei V. Kalinin, Dane Morgan
{"title":"Setting standards for data driven materials science","authors":"Keith T. Butler, Kamal Choudhary, Gabor Csanyi, Alex M. Ganose, Sergei V. Kalinin, Dane Morgan","doi":"10.1038/s41524-024-01411-6","DOIUrl":"https://doi.org/10.1038/s41524-024-01411-6","url":null,"abstract":"","PeriodicalId":19342,"journal":{"name":"npj Computational Materials","volume":"22 1","pages":""},"PeriodicalIF":9.7,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142360144","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-30DOI: 10.1038/s41524-024-01417-0
Viet-Anh Ha, Feliciano Giustino
2D semiconductors offer a promising pathway to replace silicon in next-generation electronics. Among their many advantages, 2D materials possess atomically-sharp surfaces and enable scaling the channel thickness down to the monolayer limit. However, these materials exhibit comparatively lower charge carrier mobility and higher contact resistance than 3D semiconductors, making it challenging to realize high-performance devices at scale. In this work, we search for high-mobility 2D materials by combining a high-throughput screening strategy with state-of-the-art calculations based on the ab initio Boltzmann transport equation. Our analysis singles out a known transition metal dichalcogenide, monolayer WS2, as the most promising 2D semiconductor, with the potential to reach ultra-high room-temperature hole mobilities in excess of 1300 cm2/Vs should Ohmic contacts and low defect densities be achieved. Our work also highlights the importance of performing full-blown ab initio transport calculations to achieve predictive accuracy, including spin–orbital couplings, quasiparticle corrections, dipole and quadrupole long-range electron–phonon interactions, as well as scattering by point defects and extended defects.
二维半导体为在下一代电子器件中取代硅提供了一条前景广阔的途径。二维材料具有许多优点,其中之一是拥有原子般锐利的表面,并能将沟道厚度缩减到单层极限。然而,与三维半导体相比,这些材料表现出较低的电荷载流子迁移率和较高的接触电阻,使得实现高性能器件的规模化具有挑战性。在这项研究中,我们将高通量筛选策略与基于非初始波尔兹曼输运方程的最新计算相结合,寻找高迁移率的二维材料。我们的分析发现,已知的过渡金属二掺杂物单层 WS2 是最有前途的二维半导体,如果实现欧姆接触和低缺陷密度,它有可能达到超过 1300 cm2/Vs 的超高室温空穴迁移率。我们的工作还强调了进行全面的 ab initio 传输计算以实现预测准确性的重要性,包括自旋轨道耦合、准粒子修正、偶极子和四极子长程电子-声子相互作用,以及点缺陷和扩展缺陷散射。
{"title":"High-throughput screening of 2D materials identifies p-type monolayer WS2 as potential ultra-high mobility semiconductor","authors":"Viet-Anh Ha, Feliciano Giustino","doi":"10.1038/s41524-024-01417-0","DOIUrl":"https://doi.org/10.1038/s41524-024-01417-0","url":null,"abstract":"<p>2D semiconductors offer a promising pathway to replace silicon in next-generation electronics. Among their many advantages, 2D materials possess atomically-sharp surfaces and enable scaling the channel thickness down to the monolayer limit. However, these materials exhibit comparatively lower charge carrier mobility and higher contact resistance than 3D semiconductors, making it challenging to realize high-performance devices at scale. In this work, we search for high-mobility 2D materials by combining a high-throughput screening strategy with state-of-the-art calculations based on the ab initio Boltzmann transport equation. Our analysis singles out a known transition metal dichalcogenide, monolayer WS<sub>2</sub>, as the most promising 2D semiconductor, with the potential to reach ultra-high room-temperature hole mobilities in excess of 1300 cm<sup>2</sup>/Vs should Ohmic contacts and low defect densities be achieved. Our work also highlights the importance of performing full-blown ab initio transport calculations to achieve predictive accuracy, including spin–orbital couplings, quasiparticle corrections, dipole and quadrupole long-range electron–phonon interactions, as well as scattering by point defects and extended defects.</p>","PeriodicalId":19342,"journal":{"name":"npj Computational Materials","volume":"1 1","pages":""},"PeriodicalIF":9.7,"publicationDate":"2024-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142330310","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
A critical issue in laser powder bed fusion (LPBF) additive manufacturing is the selective vaporization of alloying elements resulting in poor mechanical properties and corrosion resistance of parts. The process also alters the part’s chemical composition compared to the feedstock. Here we present a novel multi-physics modeling framework, integrating heat and fluid flow simulations, thermodynamic calculations, and evaporation modeling to estimate and control the composition change during LPBF of nickel-based superalloys. Experimental validation confirms the accuracy of our model. Moreover, we quantify the relative vulnerabilities of different nickel-based superalloys to composition change quantitatively and we examine the effect of remelting due to the layer-by-layer deposition during the LPBF process. Spatial variations in evaporative flux and compositions for each element were determined, providing valuable insights into the LPBF process and product attributes. The results of this study can be used to optimize the LPBF process parameters such as laser power, scanning speed, and powder layer thickness to ensure the production of high-quality components with desired chemical compositions.
{"title":"Integrated modeling to control vaporization-induced composition change during additive manufacturing of nickel-based superalloys","authors":"Tuhin Mukherjee, Junji Shinjo, Tarasankar DebRoy, Chinnapat Panwisawas","doi":"10.1038/s41524-024-01418-z","DOIUrl":"https://doi.org/10.1038/s41524-024-01418-z","url":null,"abstract":"<p>A critical issue in laser powder bed fusion (LPBF) additive manufacturing is the selective vaporization of alloying elements resulting in poor mechanical properties and corrosion resistance of parts. The process also alters the part’s chemical composition compared to the feedstock. Here we present a novel multi-physics modeling framework, integrating heat and fluid flow simulations, thermodynamic calculations, and evaporation modeling to estimate and control the composition change during LPBF of nickel-based superalloys. Experimental validation confirms the accuracy of our model. Moreover, we quantify the relative vulnerabilities of different nickel-based superalloys to composition change quantitatively and we examine the effect of remelting due to the layer-by-layer deposition during the LPBF process. Spatial variations in evaporative flux and compositions for each element were determined, providing valuable insights into the LPBF process and product attributes. The results of this study can be used to optimize the LPBF process parameters such as laser power, scanning speed, and powder layer thickness to ensure the production of high-quality components with desired chemical compositions.</p>","PeriodicalId":19342,"journal":{"name":"npj Computational Materials","volume":"56 1","pages":""},"PeriodicalIF":9.7,"publicationDate":"2024-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142330324","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-28DOI: 10.1038/s41524-024-01410-7
Bin Liu, Jirui Jin, Mingjie Liu
Fullerenes, as characteristic carbon nanomaterials, offer significant potential for diverse applications due to their structural diversity and tunable properties. Numerous isomers can exist for a specific fullerene size, yet a comprehensive understanding of their fundamental properties remains elusive. In this study, we construct an up-to-date computational database for C20–C60 fullerenes, consisting of 5770 structures, and calculate 12 fundamental properties using DFT, including stability (binding energy), electronic properties (HOMO-LUMO gap), and solubility (partition coefficient logP). Our findings reveal that the HOMO-LUMO gap weakly correlates with both binding energy and logP, indicating that electronic properties can be tailored for specific uses without affecting stability or solubility. In addition, we introduce a set of topological features and geometric measures to investigate structure-property relationships. We apply atom, bond, and hexagon features to effectively predict the stability of C20–C60 fullerenes, surpassing the conventional qualitative isolated pentagon rule, and demonstrating their robust transferability to larger-size fullerenes beyond C60. Our work offers guidance for optimizing fullerenes as electron acceptors in organic solar cells and lays a foundational understanding of their functionalization and applications in energy conversion and nanomaterial sciences.
{"title":"Mapping structure-property relationships in fullerene systems: a computational study from C20 to C60","authors":"Bin Liu, Jirui Jin, Mingjie Liu","doi":"10.1038/s41524-024-01410-7","DOIUrl":"https://doi.org/10.1038/s41524-024-01410-7","url":null,"abstract":"<p>Fullerenes, as characteristic carbon nanomaterials, offer significant potential for diverse applications due to their structural diversity and tunable properties. Numerous isomers can exist for a specific fullerene size, yet a comprehensive understanding of their fundamental properties remains elusive. In this study, we construct an up-to-date computational database for C<sub>20</sub>–C<sub>60</sub> fullerenes, consisting of 5770 structures, and calculate 12 fundamental properties using DFT, including stability (binding energy), electronic properties (HOMO-LUMO gap), and solubility (partition coefficient logP). Our findings reveal that the HOMO-LUMO gap weakly correlates with both binding energy and logP, indicating that electronic properties can be tailored for specific uses without affecting stability or solubility. In addition, we introduce a set of topological features and geometric measures to investigate structure-property relationships. We apply atom, bond, and hexagon features to effectively predict the stability of C<sub>20</sub>–C<sub>60</sub> fullerenes, surpassing the conventional qualitative isolated pentagon rule, and demonstrating their robust transferability to larger-size fullerenes beyond C<sub>60</sub>. Our work offers guidance for optimizing fullerenes as electron acceptors in organic solar cells and lays a foundational understanding of their functionalization and applications in energy conversion and nanomaterial sciences.</p>","PeriodicalId":19342,"journal":{"name":"npj Computational Materials","volume":"38 1","pages":""},"PeriodicalIF":9.7,"publicationDate":"2024-09-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142328874","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Computational investigations of biological and soft-matter systems governed by strongly anisotropic interactions typically require resource-demanding methods such as atomistic simulations. However, these techniques frequently prove to be prohibitively expensive for accessing the long-time and large-length scales inherent to such systems. Conversely, coarse-grained models offer a computationally efficient alternative. Nonetheless, models of this type have seldom been developed to accurately represent anisotropic or directional interactions. In this work, we introduce a straightforward bottom-up, data-driven approach for constructing single-site coarse-grained potentials suitable for particles with arbitrary shapes and highly directional interactions. Our method for constructing these coarse-grained potentials relies on particle-centered descriptors of local structure that effectively encode dependencies on rotational degrees of freedom in the interactions. By using these descriptors as regressors in a linear model and employing a simple feature selection scheme, we construct single-site coarse-grained potentials for particles with anisotropic interactions, including surface-patterned particles and colloidal superballs in the presence of non-adsorbing polymers. We validate the efficacy of our models by accurately capturing the intricacies of the potential-energy surfaces from the underlying fine-grained models. Additionally, we demonstrate that this simple approach can accurately represent the contact function (shape) of non-spherical particles, which may be leveraged to construct continuous potentials suitable for large-scale simulations.
{"title":"Machine-learned coarse-grained potentials for particles with anisotropic shapes and interactions","authors":"Gerardo Campos-Villalobos, Rodolfo Subert, Giuliana Giunta, Marjolein Dijkstra","doi":"10.1038/s41524-024-01405-4","DOIUrl":"https://doi.org/10.1038/s41524-024-01405-4","url":null,"abstract":"<p>Computational investigations of biological and soft-matter systems governed by strongly anisotropic interactions typically require resource-demanding methods such as atomistic simulations. However, these techniques frequently prove to be prohibitively expensive for accessing the long-time and large-length scales inherent to such systems. Conversely, coarse-grained models offer a computationally efficient alternative. Nonetheless, models of this type have seldom been developed to accurately represent anisotropic or directional interactions. In this work, we introduce a straightforward bottom-up, data-driven approach for constructing single-site coarse-grained potentials suitable for particles with arbitrary shapes and highly directional interactions. Our method for constructing these coarse-grained potentials relies on particle-centered descriptors of local structure that effectively encode dependencies on rotational degrees of freedom in the interactions. By using these descriptors as regressors in a linear model and employing a simple feature selection scheme, we construct single-site coarse-grained potentials for particles with anisotropic interactions, including surface-patterned particles and colloidal superballs in the presence of non-adsorbing polymers. We validate the efficacy of our models by accurately capturing the intricacies of the potential-energy surfaces from the underlying fine-grained models. Additionally, we demonstrate that this simple approach can accurately represent the contact function (shape) of non-spherical particles, which may be leveraged to construct continuous potentials suitable for large-scale simulations.</p>","PeriodicalId":19342,"journal":{"name":"npj Computational Materials","volume":"22 1","pages":""},"PeriodicalIF":9.7,"publicationDate":"2024-09-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142328872","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-20DOI: 10.1038/s41524-024-01392-6
Damdae Park, Wonsuk Chung, Byoung Koun Min, Ung Lee, Seungho Yu, Kyeongsu Kim
All-solid-state Na-ion batteries have emerged as alternatives to all-solid-state Li-ion batteries owing to the global abundance of Na element. However, finding a commercially viable Na-ion solid-state electrolyte (SSE) remains challenging due to the relatively poor understanding of the structures effective for conduction compared to those for Li-ion SSE. In this study, we develop a screening framework based on an unsupervised machine learning technique to characterize Na-ion SSEs according to their lattice structures. Specifically, we evaluate feature vectors encoding 180 structural properties for 12,670 materials containing Na ions. Subsequently, the resulting feature vectors are clustered using hierarchical density-based spatial clustering of applications with noise (HDBSCAN), leading to the discovery of 12 groups including those with experimentally proven Na-ion superionic conductors such as NASICONs and sodium chalcogenides. Post hoc analysis of these clusters reveals that the groups with high conductivity share similar characteristics, including the existence of ion channels for Na ions and the weak interactions between Na ions and the proximate atoms. Ab initio molecular dynamics simulations confirm that the promising groups exhibit exceptional ion diffusivity compared to other groups. By employing decision tree classifiers trained to screen promising groups, we demonstrate the rapid assessment of the potential of a given material. Finally, we offer perspectives and insights for the development of novel Na-ion SSEs for all-solid-state Na-ion batteries.
由于 Na 元素在全球范围内的丰富性,全固态 Na 离子电池已成为全固态锂离子电池的替代品。然而,与锂离子固态电解质相比,由于对有效传导结构的了解相对较少,因此寻找商业上可行的瑙离子固态电解质(SSE)仍然具有挑战性。在本研究中,我们开发了一种基于无监督机器学习技术的筛选框架,可根据氖离子固态电解质的晶格结构对其进行表征。具体来说,我们评估了 12,670 种含 Na 离子材料的 180 种结构特性的特征向量。随后,利用基于密度的分层空间聚类应用(HDBSCAN)对得到的特征向量进行聚类,从而发现了 12 个组,其中包括那些经实验证明的纳离子超离子导体,如 NASICONs 和钠瑀。对这些群组的事后分析表明,具有高电导率的群组具有相似的特征,包括 Na 离子通道的存在以及 Na 离子与邻近原子之间的微弱相互作用。Ab initio 分子动力学模拟证实,与其他基团相比,有希望的基团表现出卓越的离子扩散性。通过使用经过训练的决策树分类器来筛选有潜力的基团,我们展示了对特定材料潜力的快速评估。最后,我们为开发用于全固态钠离子电池的新型钠离子 SSE 提出了展望和见解。
{"title":"Computational screening of sodium solid electrolytes through unsupervised learning","authors":"Damdae Park, Wonsuk Chung, Byoung Koun Min, Ung Lee, Seungho Yu, Kyeongsu Kim","doi":"10.1038/s41524-024-01392-6","DOIUrl":"https://doi.org/10.1038/s41524-024-01392-6","url":null,"abstract":"<p>All-solid-state Na-ion batteries have emerged as alternatives to all-solid-state Li-ion batteries owing to the global abundance of Na element. However, finding a commercially viable Na-ion solid-state electrolyte (SSE) remains challenging due to the relatively poor understanding of the structures effective for conduction compared to those for Li-ion SSE. In this study, we develop a screening framework based on an unsupervised machine learning technique to characterize Na-ion SSEs according to their lattice structures. Specifically, we evaluate feature vectors encoding 180 structural properties for 12,670 materials containing Na ions. Subsequently, the resulting feature vectors are clustered using hierarchical density-based spatial clustering of applications with noise (HDBSCAN), leading to the discovery of 12 groups including those with experimentally proven Na-ion superionic conductors such as NASICONs and sodium chalcogenides. <i>Post hoc</i> analysis of these clusters reveals that the groups with high conductivity share similar characteristics, including the existence of ion channels for Na ions and the weak interactions between Na ions and the proximate atoms. Ab initio molecular dynamics simulations confirm that the promising groups exhibit exceptional ion diffusivity compared to other groups. By employing decision tree classifiers trained to screen promising groups, we demonstrate the rapid assessment of the potential of a given material. Finally, we offer perspectives and insights for the development of novel Na-ion SSEs for all-solid-state Na-ion batteries.</p>","PeriodicalId":19342,"journal":{"name":"npj Computational Materials","volume":"12 1","pages":""},"PeriodicalIF":9.7,"publicationDate":"2024-09-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142276092","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-20DOI: 10.1038/s41524-024-01365-9
Nina Andrejevic, Tao Zhou, Qingteng Zhang, Suresh Narayanan, Mathew J. Cherukara, Maria K. Y. Chan
Coherent X-ray scattering (CXS) techniques are capable of interrogating dynamics of nano- to mesoscale materials systems at time scales spanning several orders of magnitude. However, obtaining accurate theoretical descriptions of complex dynamics is often limited by one or more factors—the ability to visualize dynamics in real space, computational cost of high-fidelity simulations, and effectiveness of approximate or phenomenological models. In this work, we develop a data-driven framework to uncover mechanistic models of dynamics directly from time-resolved CXS measurements without solving the phase reconstruction problem for the entire time series of diffraction patterns. Our approach uses neural differential equations to parameterize unknown real-space dynamics and implements a computational scattering forward model to relate real-space predictions to reciprocal-space observations. This method is shown to recover the dynamics of several computational model systems under various simulated conditions of measurement resolution and noise. Moreover, the trained model enables estimation of long-term dynamics well beyond the maximum observation time, which can be used to inform and refine experimental parameters in practice. Finally, we demonstrate an experimental proof-of-concept by applying our framework to recover the probe trajectory from a ptychographic scan. Our proposed framework bridges the wide existing gap between approximate models and complex data.
相干 X 射线散射(CXS)技术能够在跨越几个数量级的时间尺度上探测纳米到中尺度材料系统的动态。然而,获得复杂动力学的精确理论描述往往受到一个或多个因素的限制--真实空间中可视化动力学的能力、高保真模拟的计算成本以及近似或现象模型的有效性。在这项工作中,我们开发了一种数据驱动框架,可直接从时间分辨 CXS 测量中发现动力学机理模型,而无需解决整个衍射图样时间序列的相位重建问题。我们的方法使用神经微分方程对未知实空间动力学进行参数化,并实施计算散射前向模型,将实空间预测与倒易空间观测联系起来。结果表明,这种方法能在各种测量分辨率和噪声模拟条件下恢复多个计算模型系统的动态。此外,训练有素的模型能够估算出远超过最长观测时间的长期动态,可用于在实践中提供信息和完善实验参数。最后,我们通过应用我们的框架来恢复探针的轨迹,展示了一个实验性的概念验证。我们提出的框架弥补了近似模型与复杂数据之间的巨大差距。
{"title":"Data-driven discovery of dynamics from time-resolved coherent scattering","authors":"Nina Andrejevic, Tao Zhou, Qingteng Zhang, Suresh Narayanan, Mathew J. Cherukara, Maria K. Y. Chan","doi":"10.1038/s41524-024-01365-9","DOIUrl":"https://doi.org/10.1038/s41524-024-01365-9","url":null,"abstract":"<p>Coherent X-ray scattering (CXS) techniques are capable of interrogating dynamics of nano- to mesoscale materials systems at time scales spanning several orders of magnitude. However, obtaining accurate theoretical descriptions of complex dynamics is often limited by one or more factors—the ability to visualize dynamics in real space, computational cost of high-fidelity simulations, and effectiveness of approximate or phenomenological models. In this work, we develop a data-driven framework to uncover mechanistic models of dynamics directly from time-resolved CXS measurements without solving the phase reconstruction problem for the entire time series of diffraction patterns. Our approach uses neural differential equations to parameterize unknown real-space dynamics and implements a computational scattering forward model to relate real-space predictions to reciprocal-space observations. This method is shown to recover the dynamics of several computational model systems under various simulated conditions of measurement resolution and noise. Moreover, the trained model enables estimation of long-term dynamics well beyond the maximum observation time, which can be used to inform and refine experimental parameters in practice. Finally, we demonstrate an experimental proof-of-concept by applying our framework to recover the probe trajectory from a ptychographic scan. Our proposed framework bridges the wide existing gap between approximate models and complex data.</p>","PeriodicalId":19342,"journal":{"name":"npj Computational Materials","volume":"14 1","pages":""},"PeriodicalIF":9.7,"publicationDate":"2024-09-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142276093","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-18DOI: 10.1038/s41524-024-01414-3
Timothy Yoo, Eitan Hershkovitz, Yang Yang, Flávia da Cruz Gallo, Michele V. Manuel, Honggyu Kim
Four-dimensional scanning transmission electron microscopy, coupled with a wide array of data analytics, has unveiled new insights into complex materials. Here, we introduce a straightforward unsupervised machine learning approach that entails dimensionality reduction and clustering with minimal hyperparameter tuning to semi-automatically identify unique coexisting structures in metallic alloys. Applying cepstral transformation to the original diffraction dataset improves this process by effectively isolating phase information from potential signal ambiguity caused by sample tilt and thickness variations, commonly observed in electron diffraction patterns. In a case study of a NiTiHfAl shape memory alloy, conventional scanning transmission electron microscopy imaging struggles to accurately identify a low-contrast precipitate at lower magnifications, posing challenges for microscale analyses. We find that our method efficiently separates multiple coherent structures while using objective means of determining hyperparameters. Furthermore, we demonstrate how the clustering result facilitates more robust strain mapping to provide immediate and quantitative structural insights.
{"title":"Unsupervised machine learning and cepstral analysis with 4D-STEM for characterizing complex microstructures of metallic alloys","authors":"Timothy Yoo, Eitan Hershkovitz, Yang Yang, Flávia da Cruz Gallo, Michele V. Manuel, Honggyu Kim","doi":"10.1038/s41524-024-01414-3","DOIUrl":"https://doi.org/10.1038/s41524-024-01414-3","url":null,"abstract":"<p>Four-dimensional scanning transmission electron microscopy, coupled with a wide array of data analytics, has unveiled new insights into complex materials. Here, we introduce a straightforward unsupervised machine learning approach that entails dimensionality reduction and clustering with minimal hyperparameter tuning to semi-automatically identify unique coexisting structures in metallic alloys. Applying cepstral transformation to the original diffraction dataset improves this process by effectively isolating phase information from potential signal ambiguity caused by sample tilt and thickness variations, commonly observed in electron diffraction patterns. In a case study of a NiTiHfAl shape memory alloy, conventional scanning transmission electron microscopy imaging struggles to accurately identify a low-contrast precipitate at lower magnifications, posing challenges for microscale analyses. We find that our method efficiently separates multiple coherent structures while using objective means of determining hyperparameters. Furthermore, we demonstrate how the clustering result facilitates more robust strain mapping to provide immediate and quantitative structural insights.</p>","PeriodicalId":19342,"journal":{"name":"npj Computational Materials","volume":"8 1","pages":""},"PeriodicalIF":9.7,"publicationDate":"2024-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142236183","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-18DOI: 10.1038/s41524-024-01413-4
Jun Luo, Omar Ben Said, Peigen Xie, Marco Gibaldi, Jake Burner, Cécile Pereira, Tom K. Woo
Accurate computation of the gas adsorption properties of MOFs is usually bottlenecked by the DFT calculations required to generate partial atomic charges. Therefore, large virtual screenings of MOFs often use the QEq method which is rapid, but of limited accuracy. Recently, machine learning (ML) models have been trained to generate charges in much better agreement with DFT-derived charges compared to the QEq models. Previous ML charge models for MOFs have all used training sets with less than 3000 MOFs obtained from the CoRE MOF database, which has recently been shown to have high structural error rates. In this work, we developed a graph attention network model for predicting DFT-derived charges in MOFs where the model was developed with the ARC-MOF database that contains 279,632 MOFs and over 40 million charges. This model, which we call MEPO-ML, predicts charges with a mean absolute error of 0.025e on our test set of over 27 K MOFs. Other ML models reported in the literature were also trained using the same dataset and descriptors, and MEPO-ML was shown to give the lowest errors. The gas adsorption properties evaluated using MEPO-ML charges are found to be in significantly better agreement with the reference DFT-derived charges compared to the empirical charges, for both polar and non-polar gases. Using only a single CPU core on our benchmark computer, MEPO-ML charges can be generated in less than two seconds on average (including all computations required to apply the model) for MOFs in the test set of 27 K MOFs.
{"title":"MEPO-ML: a robust graph attention network model for rapid generation of partial atomic charges in metal-organic frameworks","authors":"Jun Luo, Omar Ben Said, Peigen Xie, Marco Gibaldi, Jake Burner, Cécile Pereira, Tom K. Woo","doi":"10.1038/s41524-024-01413-4","DOIUrl":"https://doi.org/10.1038/s41524-024-01413-4","url":null,"abstract":"<p>Accurate computation of the gas adsorption properties of MOFs is usually bottlenecked by the DFT calculations required to generate partial atomic charges. Therefore, large virtual screenings of MOFs often use the QEq method which is rapid, but of limited accuracy. Recently, machine learning (ML) models have been trained to generate charges in much better agreement with DFT-derived charges compared to the QEq models. Previous ML charge models for MOFs have all used training sets with less than 3000 MOFs obtained from the CoRE MOF database, which has recently been shown to have high structural error rates. In this work, we developed a graph attention network model for predicting DFT-derived charges in MOFs where the model was developed with the ARC-MOF database that contains 279,632 MOFs and over 40 million charges. This model, which we call <i>MEPO-ML</i>, predicts charges with a mean absolute error of 0.025e on our test set of over 27 K MOFs. Other ML models reported in the literature were also trained using the same dataset and descriptors, and MEPO-ML was shown to give the lowest errors. The gas adsorption properties evaluated using MEPO-ML charges are found to be in significantly better agreement with the reference DFT-derived charges compared to the empirical charges, for both polar and non-polar gases. Using only a single CPU core on our benchmark computer, MEPO-ML charges can be generated in less than two seconds on average (including all computations required to apply the model) for MOFs in the test set of 27 K MOFs.</p>","PeriodicalId":19342,"journal":{"name":"npj Computational Materials","volume":"7 1","pages":""},"PeriodicalIF":9.7,"publicationDate":"2024-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142245357","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-09-17DOI: 10.1038/s41524-024-01412-5
Mirko Vanzan, Margherita Marsili
Plasmonic-driven photocatalysis is one of the most vibrant and promising field in nanoscience. Out of the various mechanisms known to activate chemical reactions in molecules interacting with optically excited nanostructures, the one involving production and transfer of Hot Carriers (HCs) is among the most relevant. Over the past decade, along with stunning advances on HCs control and manipulation, a variety of theoretical and computational strategies have been developed to model this phenomenon and explore its underlying physics. These techniques have provided comprehensive understandings of HCs life stages and dynamics, and allowed valuable insights on their role in photocatalysis. However, to date it is hard to extricate within the plethora of methods developed and the growing number of applications they found. The purpose of this review is to survey the approaches employed so far to model HCs photophysics, rationalizing and classifying the different studies in terms of modelization, theoretical approaches, and approximations.
{"title":"Theoretical approaches for the description of plasmon generated hot carriers phenomena","authors":"Mirko Vanzan, Margherita Marsili","doi":"10.1038/s41524-024-01412-5","DOIUrl":"https://doi.org/10.1038/s41524-024-01412-5","url":null,"abstract":"<p>Plasmonic-driven photocatalysis is one of the most vibrant and promising field in nanoscience. Out of the various mechanisms known to activate chemical reactions in molecules interacting with optically excited nanostructures, the one involving production and transfer of Hot Carriers (HCs) is among the most relevant. Over the past decade, along with stunning advances on HCs control and manipulation, a variety of theoretical and computational strategies have been developed to model this phenomenon and explore its underlying physics. These techniques have provided comprehensive understandings of HCs life stages and dynamics, and allowed valuable insights on their role in photocatalysis. However, to date it is hard to extricate within the plethora of methods developed and the growing number of applications they found. The purpose of this review is to survey the approaches employed so far to model HCs photophysics, rationalizing and classifying the different studies in terms of modelization, theoretical approaches, and approximations.</p><figure></figure>","PeriodicalId":19342,"journal":{"name":"npj Computational Materials","volume":"471 1","pages":""},"PeriodicalIF":9.7,"publicationDate":"2024-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142236186","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"材料科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}