Erythromycin, a broad-spectrum antibiotic, is a prototypical polyketide produced via heterologous biosynthesis in Escherichia coli. However, the instability of plasmid‑encoded genes within the erythromycin biosynthetic pathway, coupled with limited intracellular availability of sugar units and propionyl‑CoA, constitutes major bottlenecks that hinder its efficient production in E. coli. In this study, we constructed a de novo erythromycin A producing E. coli strain throughchromosomal integrationand achieved substantial production improvement by enhancing the supply of sugar units for the erythromycin post-modification and propionyl-CoA. To enable precise and efficient transfer of multiple large DNA fragments from different plasmids into the chromosome, we devised achromosomal integrationstrategy employing a reusable target site toolkit, allowing the integration of four gene expression cassettes (total length ∼ 56.2 kb) into the genome of E. coli BAP1, thereby generating the recombinant strain E. coli sZG9. Subsequently, the availability of sugar units was increased by systematically blocking competing metabolic pathways and introducing a Ser45Asn mutation in the negative regulatory site of phosphoglucomutase, which elevated erythromycin A production from 1.06 mg/L to 5.53 mg/L. Finally, a Lys592Asn mutation in the negative regulatory site of propionyl-CoA synthetase further boosted the production to 9.80 mg/L, representing an 8.25-fold increase over the parental strain. This work establishes an effective large-fragment DNA chromosomal integrationapproach and provides a promising chassis strain for future metabolic engineering efforts aimed at enhancing erythromycin A biosynthesis in E. coli.
{"title":"Reusable target-site toolkit for large-fragment (56.2 kilobases) chromosomal integration to enhance erythromycin biosynthesis in Escherichia coli.","authors":"Zhanguang Feng, Guangyi Wang, Zhifeng Liu, Yuhan Wu, Jiangming Zhu, Yong Wang","doi":"10.1016/j.biortech.2025.133917","DOIUrl":"10.1016/j.biortech.2025.133917","url":null,"abstract":"<p><p>Erythromycin, a broad-spectrum antibiotic, is a prototypical polyketide produced via heterologous biosynthesis in Escherichia coli. However, the instability of plasmid‑encoded genes within the erythromycin biosynthetic pathway, coupled with limited intracellular availability of sugar units and propionyl‑CoA, constitutes major bottlenecks that hinder its efficient production in E. coli. In this study, we constructed a de novo erythromycin A producing E. coli strain throughchromosomal integrationand achieved substantial production improvement by enhancing the supply of sugar units for the erythromycin post-modification and propionyl-CoA. To enable precise and efficient transfer of multiple large DNA fragments from different plasmids into the chromosome, we devised achromosomal integrationstrategy employing a reusable target site toolkit, allowing the integration of four gene expression cassettes (total length ∼ 56.2 kb) into the genome of E. coli BAP1, thereby generating the recombinant strain E. coli sZG9. Subsequently, the availability of sugar units was increased by systematically blocking competing metabolic pathways and introducing a Ser45Asn mutation in the negative regulatory site of phosphoglucomutase, which elevated erythromycin A production from 1.06 mg/L to 5.53 mg/L. Finally, a Lys592Asn mutation in the negative regulatory site of propionyl-CoA synthetase further boosted the production to 9.80 mg/L, representing an 8.25-fold increase over the parental strain. This work establishes an effective large-fragment DNA chromosomal integrationapproach and provides a promising chassis strain for future metabolic engineering efforts aimed at enhancing erythromycin A biosynthesis in E. coli.</p>","PeriodicalId":258,"journal":{"name":"Bioresource Technology","volume":" ","pages":"133917"},"PeriodicalIF":9.0,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145888496","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-03-01Epub Date: 2026-01-14DOI: 10.1016/j.biortech.2026.134021
Luis D Allegue, Federica Farabegoli, Leticia Regueiro, Paula Fajardo, Siegfried E Vlaeminck
Microbial protein is a resource-efficient alternative to conventional protein, and gas-fed systems based on methane- and hydrogen-oxidizing bacteria are attractive because they directly convert gaseous C1 substrates into biomass, without reliance on arable land or organic feedstocks. We examined whether co-cultivating these organisms improves carbon retention by enabling in situ reuse of CO2 released during CH4 oxidation. After selecting a compatible pair (Methylomonas koyamae and Cupriavidus necator), a continuous airlift reactor was operated in four phases with progressively reduced external CO2 supply. Biomass in the co-culture reached 2.1 ± 0.5 g L-1, with protein contents of 50-65% (dry weight). Off-gas CO2 decreased to near zero, corresponding to a marked increase in carbon-use efficiency from 47% to 91%. Amino acid composition and digestibility, expressed as the Digestible Indispensable Amino Acid Score, remained stable across phases, and sensory evaluation indicated a lighter colour and cleaner aroma for the co-culture biomass. This study demonstrates a continuous methane- and hydrogen-oxidizing bacteria process achieving near-complete CO2 recycling and high-quality microbial protein production.
微生物蛋白是传统蛋白质的资源高效替代品,基于甲烷和氢氧化细菌的气供系统很有吸引力,因为它们直接将气态C1底物转化为生物质,而不依赖耕地或有机原料。我们研究了共同培养这些生物是否能通过原位再利用CH4氧化过程中释放的二氧化碳来提高碳潴留。在选择合适的一对(小山甲基单胞菌和necatus Cupriavidus)后,连续气升反应器分四个阶段运行,逐渐减少外部CO2供应。共培养生物量达到2.1 ± 0.5 g L-1,蛋白质含量为50-65%(干重)。废气中的二氧化碳减少到接近于零,相应的碳利用效率从47%显著提高到91%。氨基酸组成和消化率(以可消化必需氨基酸评分表示)在各阶段保持稳定,感官评价表明共培养生物量的颜色更浅,香气更清。本研究展示了一种连续的甲烷和氢氧化细菌工艺,实现了几乎完全的二氧化碳回收和高质量的微生物蛋白生产。
{"title":"Carbon-efficient microbial protein production via continuous co-cultivation of methane- and hydrogen-oxidizing bacteria.","authors":"Luis D Allegue, Federica Farabegoli, Leticia Regueiro, Paula Fajardo, Siegfried E Vlaeminck","doi":"10.1016/j.biortech.2026.134021","DOIUrl":"10.1016/j.biortech.2026.134021","url":null,"abstract":"<p><p>Microbial protein is a resource-efficient alternative to conventional protein, and gas-fed systems based on methane- and hydrogen-oxidizing bacteria are attractive because they directly convert gaseous C1 substrates into biomass, without reliance on arable land or organic feedstocks. We examined whether co-cultivating these organisms improves carbon retention by enabling in situ reuse of CO<sub>2</sub> released during CH<sub>4</sub> oxidation. After selecting a compatible pair (Methylomonas koyamae and Cupriavidus necator), a continuous airlift reactor was operated in four phases with progressively reduced external CO<sub>2</sub> supply. Biomass in the co-culture reached 2.1 ± 0.5 g L<sup>-1</sup>, with protein contents of 50-65% (dry weight). Off-gas CO<sub>2</sub> decreased to near zero, corresponding to a marked increase in carbon-use efficiency from 47% to 91%. Amino acid composition and digestibility, expressed as the Digestible Indispensable Amino Acid Score, remained stable across phases, and sensory evaluation indicated a lighter colour and cleaner aroma for the co-culture biomass. This study demonstrates a continuous methane- and hydrogen-oxidizing bacteria process achieving near-complete CO<sub>2</sub> recycling and high-quality microbial protein production.</p>","PeriodicalId":258,"journal":{"name":"Bioresource Technology","volume":" ","pages":"134021"},"PeriodicalIF":9.0,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145987536","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Lignin condensation and the recalcitrance of lignocellulose during conventional fractionation limit their valorization. Herein, we develop a tunable ternary deep eutectic solvent (TDES) composed of guanidine hydrochloride, lactic acid, and ethylene glycol for efficient fractionation of moso bamboo. By modulating the EG content, 74.3% delignification was achieved while preserving lignin structure, as confirmed by a β‑O‑4 content of 26.3/100 Ar (61.3% retention). Lignin nanoparticles self‑assembled into uniform lignin nanobottles (LNBs) with size controlled by lignin structure. Moreover, the preserved structural integrity enabled a high bio‑oil yield of 39.7 wt%. 4‑Vinylphenol was identified by Py‑GC/MS as the dominant product. Strong positive correlations were observed between β‑O‑4 content and both LNBs size and bio‑oil yield. Enzymatic saccharification of the treated residue achieved up to 94.4% glucose conversion. This work establishes a clear structure‑property relationship and presents a "structure‑first" strategy for dual‑pathway lignin valorization into nanomaterials and fuels.
常规分馏过程中木质素的缩合和木质纤维素的顽固性限制了它们的增值。在此,我们开发了一种由盐酸胍、乳酸和乙二醇组成的可调三元深共晶溶剂(TDES),用于毛竹的高效分离。通过调节EG含量,在保持木质素结构的同时实现了74.3%的脱木质素,β - O - 4含量为26.3/100 Ar(保留率为61.3%)证实了这一点。木质素纳米颗粒自组装成均匀的木质素纳米瓶(lnb),其大小由木质素结构控制。此外,保留的结构完整性使生物油的产率高达39.7% wt%。Py - GC/MS鉴定4 -乙烯基酚为优势产物。β‑O‑4含量与LNBs大小和生物油产量呈显著正相关。经酶糖化处理的残渣,葡萄糖转化率高达94.4%。这项工作建立了一个明确的结构-性质关系,并提出了一个“结构优先”的策略,双途径木质素增值到纳米材料和燃料。
{"title":"Unlocking dual lignin valorization from moso bamboo via ethylene glycol-tuned deep eutectic solvent fractionation.","authors":"Yulu He, Ruojin Shen, Chao Wang, Lupeng Shao, Xianhai Zeng, Aiyong He, Xingxiang Ji, Guihua Yang, Feng Xu","doi":"10.1016/j.biortech.2026.134019","DOIUrl":"10.1016/j.biortech.2026.134019","url":null,"abstract":"<p><p>Lignin condensation and the recalcitrance of lignocellulose during conventional fractionation limit their valorization. Herein, we develop a tunable ternary deep eutectic solvent (TDES) composed of guanidine hydrochloride, lactic acid, and ethylene glycol for efficient fractionation of moso bamboo. By modulating the EG content, 74.3% delignification was achieved while preserving lignin structure, as confirmed by a β‑O‑4 content of 26.3/100 Ar (61.3% retention). Lignin nanoparticles self‑assembled into uniform lignin nanobottles (LNBs) with size controlled by lignin structure. Moreover, the preserved structural integrity enabled a high bio‑oil yield of 39.7 wt%. 4‑Vinylphenol was identified by Py‑GC/MS as the dominant product. Strong positive correlations were observed between β‑O‑4 content and both LNBs size and bio‑oil yield. Enzymatic saccharification of the treated residue achieved up to 94.4% glucose conversion. This work establishes a clear structure‑property relationship and presents a \"structure‑first\" strategy for dual‑pathway lignin valorization into nanomaterials and fuels.</p>","PeriodicalId":258,"journal":{"name":"Bioresource Technology","volume":" ","pages":"134019"},"PeriodicalIF":9.0,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145987546","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Lignin-carbohydrate complex (LCC), natural plant cell wall macromolecules, has garnered increasing attention for multifunctional bioactivities attributed to a unique lignin-polysaccharide hybrid structure. However, conventional separation methods often compromise the structural integrity and biological function of LCC, limiting practical applications. Herein, a novel two-step xylanase-cellulase method was developed to efficiently isolate functional group-enriched LCC (XCE-LCC) with enhanced free radical scavenging and α-glucosidase inhibitory activities. Comparative analyses revealed that the two-step method partially removed cellulose and hemicellulose barriers while preserving the native LCC structure. Notably, XCE-LCC contained increased levels of bioactive functional groups (phenolic-OH: 0.93 mmol/g, -COOH: 0.23 mmol/g, and aliphatic-OH: 4.38 mmol/g) resulting in DPPH radical scavenging (58.7 %) and particularly high α-glucosidase inhibition (87.4 %). These findings demonstrate an effective enzymatic method for functional group-enriched LCC isolation and underscore the potential of LCC as a functional polymer for oxidative stress mitigation and natural α-glucosidase inhibition.
{"title":"Sequential enzymatic hydrolysis enables isolation of bioactive functional group-enriched lignin-carbohydrate complex: Insights into structure and α-glucosidase inhibition potential.","authors":"Tingting Cao, Jianglong Wei, Shixu Yu, Yutong Zhu, Tingting You, Ning Yan, Feng Xu","doi":"10.1016/j.biortech.2025.133907","DOIUrl":"10.1016/j.biortech.2025.133907","url":null,"abstract":"<p><p>Lignin-carbohydrate complex (LCC), natural plant cell wall macromolecules, has garnered increasing attention for multifunctional bioactivities attributed to a unique lignin-polysaccharide hybrid structure. However, conventional separation methods often compromise the structural integrity and biological function of LCC, limiting practical applications. Herein, a novel two-step xylanase-cellulase method was developed to efficiently isolate functional group-enriched LCC (XCE-LCC) with enhanced free radical scavenging and α-glucosidase inhibitory activities. Comparative analyses revealed that the two-step method partially removed cellulose and hemicellulose barriers while preserving the native LCC structure. Notably, XCE-LCC contained increased levels of bioactive functional groups (phenolic-OH: 0.93 mmol/g, -COOH: 0.23 mmol/g, and aliphatic-OH: 4.38 mmol/g) resulting in DPPH radical scavenging (58.7 %) and particularly high α-glucosidase inhibition (87.4 %). These findings demonstrate an effective enzymatic method for functional group-enriched LCC isolation and underscore the potential of LCC as a functional polymer for oxidative stress mitigation and natural α-glucosidase inhibition.</p>","PeriodicalId":258,"journal":{"name":"Bioresource Technology","volume":" ","pages":"133907"},"PeriodicalIF":9.0,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145877554","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}