Algal-bacterial granular sludge (ABGS) is promising for sustainable nitrogen management, yet its mechanistic advantages over bacterial aerobic granular sludge (BAGS) remain unclear. Two 16-L BAGS- and ABGS-sequencing batch reactors were operated in parallel to treat synthetic domestic wastewater and evaluated via nitrification inhibition by allylthiourea in addition to batch tests and microbial community analysis. Both biosystems achieved >99 % ammonia removal, in which nitrification/denitrification accounted for ∼99 % in BAGS while ∼53 % in ABGS with a substantial assimilatory contribution. When nitrification was inhibited, BAGS retained <2 % of its original ammonia removal capacity, whereas ABGS maintained ∼33 %, consistent with enriched phototrophs. Under normal operations, the specific ammonia removal rates of ABGS and BAGS were comparable; with allylthiourea inhibition ABGS demonstrated a >20-fold higher rate, supporting its dominance of assimilative pathways. Therefore ABGS can couple nitrification/denitrification with assimilative nitrogen retention, offering a synergistic route for nitrogen removal and bionitrogen recovery from low-strength wastewater.
{"title":"Nitrogen assimilation may facilitate enhanced nitrogen removal and reservation in algal-bacterial granular sludge.","authors":"Ziyin Ai, Yuechong Fan, Jian Dong, Xinyu Lyu, Weiwei Huang, Tian Yuan, Motoo Utsumi, Kazuya Shimizu, Zhongfang Lei","doi":"10.1016/j.biortech.2025.133799","DOIUrl":"https://doi.org/10.1016/j.biortech.2025.133799","url":null,"abstract":"<p><p>Algal-bacterial granular sludge (ABGS) is promising for sustainable nitrogen management, yet its mechanistic advantages over bacterial aerobic granular sludge (BAGS) remain unclear. Two 16-L BAGS- and ABGS-sequencing batch reactors were operated in parallel to treat synthetic domestic wastewater and evaluated via nitrification inhibition by allylthiourea in addition to batch tests and microbial community analysis. Both biosystems achieved >99 % ammonia removal, in which nitrification/denitrification accounted for ∼99 % in BAGS while ∼53 % in ABGS with a substantial assimilatory contribution. When nitrification was inhibited, BAGS retained <2 % of its original ammonia removal capacity, whereas ABGS maintained ∼33 %, consistent with enriched phototrophs. Under normal operations, the specific ammonia removal rates of ABGS and BAGS were comparable; with allylthiourea inhibition ABGS demonstrated a >20-fold higher rate, supporting its dominance of assimilative pathways. Therefore ABGS can couple nitrification/denitrification with assimilative nitrogen retention, offering a synergistic route for nitrogen removal and bionitrogen recovery from low-strength wastewater.</p>","PeriodicalId":258,"journal":{"name":"Bioresource Technology","volume":" ","pages":"133799"},"PeriodicalIF":9.0,"publicationDate":"2025-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145773129","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Dissimilatory nitrate reduction to ammonium (DNRA) represents a sustainable strategy for nitrogen resource recovery from wastewater, yet selectively enhancing DNRA over denitrification in sulfide-based autotrophic systems remains challenging. This study investigates the impact of static magnetic field (SMF, 0-100mT) on nitrate reduction pathways in sulfide-rich wastewater. SMF elevated DNRA efficiency to 41.8 % with an influent sulfide concentration of 200 mgS/L (S/N ratio of 3:1) under 30 mT, supported by nrfA upregulation (7.6 × 1010 vs. 4.0 × 107 copies/g SS in control). 15N isotope labeling and enhanced direct extracellular electron transfer via cytochrome c and conductive pili confirmed that SMF preferentially drove nitrate flux toward DNRA. Metagenomics revealed that SMF enriched DNRA taxa (Aeromonas, Shewanella) and enhanced their synergy with Thiobacillus, improving metabolic flexibility. This work unveils microbial competition mechanisms between denitrification and DNRA in sulfide-based systems and proposes an innovative SMF-assisted ammonium recovery approach, advancing the understanding of sulfide-based nitrogen removal technologies.
{"title":"Static magnetic field enhances respiratory dissimilatory nitrate reduction to ammonium over denitrification in sulfide-based autotrophic systems","authors":"Zhongling Yuan, Wei Zeng, Mengjia Zhan, Yongzhen Peng","doi":"10.1016/j.biortech.2025.133796","DOIUrl":"10.1016/j.biortech.2025.133796","url":null,"abstract":"<div><div>Dissimilatory nitrate reduction to ammonium (DNRA) represents a sustainable strategy for nitrogen resource recovery from wastewater, yet selectively enhancing DNRA over denitrification in sulfide-based autotrophic systems remains challenging. This study investigates the impact of static magnetic field (SMF, 0-100mT) on nitrate reduction pathways in sulfide-rich wastewater. SMF elevated DNRA efficiency to 41.8 % with an influent sulfide concentration of 200 mgS/L (S/N ratio of 3:1) under 30 mT, supported by <em>nrfA</em> upregulation (7.6 × 10<sup>10</sup> vs. 4.0 × 10<sup>7</sup> copies/g SS in control). <sup>15</sup>N isotope labeling and enhanced direct extracellular electron transfer via cytochrome <em>c</em> and conductive pili confirmed that SMF preferentially drove nitrate flux toward DNRA. Metagenomics revealed that SMF enriched DNRA taxa (<em>Aeromonas</em>, <em>Shewanella</em>) and enhanced their synergy with <em>Thiobacillus</em>, improving metabolic flexibility. This work unveils microbial competition mechanisms between denitrification and DNRA in sulfide-based systems and proposes an innovative SMF-assisted ammonium recovery approach, advancing the understanding of sulfide-based nitrogen removal technologies.</div></div>","PeriodicalId":258,"journal":{"name":"Bioresource Technology","volume":"443 ","pages":"Article 133796"},"PeriodicalIF":9.0,"publicationDate":"2025-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145773080","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-15DOI: 10.1016/j.biortech.2025.133798
Yu Tian, Jiangbo Li, Dengyang Wang, Shaojie Wang, Haijia Su
Biological hydrogen production via dark fermentation is a promising and sustainable approach for renewable energy generation. However, its practical application is hindered by the inefficient utilization of carbon substrates, as a large proportion is diverted into inhibitory by-products such as volatile fatty acids (VFAs). To overcome this limitation, this study developed an integrated one-pot system, combining dark fermentation with enzyme-catalyzed esterification, which converts VFAs into high-value esters while enhancing hydrogen production. Key influence factors, including lipase type, dosage, pH, and extractant type, were systematically evaluated. Under optimal conditions, cumulative hydrogen production reached 3631 ± 154 mL/L, a 58.21 % increase compared to the non-esterified group, while butyl butyrate (BB) production in extraction reached 8.66 ± 0.06 g/L. The carbon flow analysis demonstrated that approximately 7.60 % of the carbon from the consumed starch was converted into BB. Furthermore, a fed-batch fermentation resulted in simultaneous hydrogen and BB production, achieving a final BB production of 22.44 ± 0.36 g/L. Microbial community analysis indicated that the esterification strategy promoted the enrichment of Clostridium species, known for their pivotal role in hydrogen production. Under the esterification strategy, KEGG based functional genes analysis showed a notable enrichment in the relative abundances of genes associated with glycolysis and hydrogenase functions. This innovative approach not only alleviates VFAs inhibition but also provides a theoretical and technical foundation for the high-value utilization of VFAs, offering considerable potential for industrial applications.
{"title":"Valorization of carbon resources via in situ esterification in dark fermentation: Enabling butyl butyrate formation and boosting biohydrogen production","authors":"Yu Tian, Jiangbo Li, Dengyang Wang, Shaojie Wang, Haijia Su","doi":"10.1016/j.biortech.2025.133798","DOIUrl":"10.1016/j.biortech.2025.133798","url":null,"abstract":"<div><div>Biological hydrogen production via dark fermentation is a promising and sustainable approach for renewable energy generation. However, its practical application is hindered by the inefficient utilization of carbon substrates, as a large proportion is diverted into inhibitory by-products such as volatile fatty acids (VFAs). To overcome this limitation, this study developed an integrated one-pot system, combining dark fermentation with enzyme-catalyzed esterification, which converts VFAs into high-value esters while enhancing hydrogen production. Key influence factors, including lipase type, dosage, pH, and extractant type, were systematically evaluated. Under optimal conditions, cumulative hydrogen production reached 3631 ± 154 mL/L, a 58.21 % increase compared to the non-esterified group, while butyl butyrate (BB) production in extraction reached 8.66 ± 0.06 g/L. The carbon flow analysis demonstrated that approximately 7.60 % of the carbon from the consumed starch was converted into BB. Furthermore, a fed-batch fermentation resulted in simultaneous hydrogen and BB production, achieving a final BB production of 22.44 ± 0.36 g/L. Microbial community analysis indicated that the esterification strategy promoted the enrichment of <em>Clostridium</em> species, known for their pivotal role in hydrogen production. Under the esterification strategy, KEGG based functional genes analysis showed a notable enrichment in the relative abundances of genes associated with glycolysis and hydrogenase functions. This innovative approach not only alleviates VFAs inhibition but also provides a theoretical and technical foundation for the high-value utilization of VFAs, offering considerable potential for industrial applications.</div></div>","PeriodicalId":258,"journal":{"name":"Bioresource Technology","volume":"443 ","pages":"Article 133798"},"PeriodicalIF":9.0,"publicationDate":"2025-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145773140","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-15DOI: 10.1016/j.biortech.2025.133802
Xiao Gao , Wenhe Zhang , Qingyu Wang , Zhuobing Zhang , Hongli Wei , Xiaowei Wei , Lu Zhao , Weidong Liu , Xian Jia , Song You
R-transaminases show significant promise for the industrial synthesis of chiral amine pharmaceutical intermediates. However, the application is hindered by limited substrate acceptance and poor catalytic efficiency toward bulky substrates. Herein, the R-transaminase from Pseudonocardia ammonioxydans (PaTA) with the high activity towards the mexiletine precursor ketone (1c) was identified, and its crystal structure was resolved (PDB: 9UJD). Substrate specificity analysis revealed that PaTA exhibited obvious substrate preference for aryl-substituted phenoxyacetones (1c-16c). Based on the crystal structure, key sites affecting substrate selectivity were identified, followed by multiple rounds of engineering that yielded a series of variants with enhanced catalytic performance. Ultimately, the gram-scale synthesis of R-1d and 12d was conducted, achieving the space–time yields (STY) of 24 and 32 g/L·h, respectively. This study provides practical biocatalysts for the synthesis of chiral β-amino aryl ethers, along with insights into the relationship between the enzyme-substrate binding pocket and substrate selectivity.
r -转氨酶在手性胺类药物中间体的工业合成中具有重要的应用前景。然而,由于基材接受度有限和对大块基材的催化效率较差,阻碍了其应用。本文鉴定了对美西汀前体酮(1c)具有高活性的Pseudonocardia amioxydans (PaTA) r -转氨酶,并对其晶体结构进行了解析(PDB: 9UJD)。底物特异性分析显示,PaTA对芳基取代的苯氧丙酮具有明显的底物偏好(1c-16c)。基于晶体结构,确定了影响底物选择性的关键位点,随后进行了多轮工程,产生了一系列具有增强催化性能的变体。最终进行了R-1d和12d的克级合成,时空产率(STY)分别为24和32 g/L·h。这项研究为手性β-氨基芳基醚的合成提供了实用的生物催化剂,同时也深入了解了酶-底物结合袋与底物选择性之间的关系。
{"title":"Rational engineering of R-selective transaminase from Pseudonocardia ammonioxydans for efficient synthesis of chiral β-amino aryl ethers","authors":"Xiao Gao , Wenhe Zhang , Qingyu Wang , Zhuobing Zhang , Hongli Wei , Xiaowei Wei , Lu Zhao , Weidong Liu , Xian Jia , Song You","doi":"10.1016/j.biortech.2025.133802","DOIUrl":"10.1016/j.biortech.2025.133802","url":null,"abstract":"<div><div><em>R</em>-transaminases show significant promise for the industrial synthesis of chiral amine pharmaceutical intermediates. However, the application is hindered by limited substrate acceptance and poor catalytic efficiency toward bulky substrates. Herein, the <em>R</em>-transaminase from <em>Pseudonocardia ammonioxydans</em> (<em>Pa</em>TA) with the high activity towards the mexiletine precursor ketone (<strong>1c</strong>) was identified, and its crystal structure was resolved (PDB: 9UJD). Substrate specificity analysis revealed that <em>Pa</em>TA exhibited obvious substrate preference for aryl-substituted phenoxyacetones (<strong>1c</strong>-<strong>16c</strong>). Based on the crystal structure, key sites affecting substrate selectivity were identified, followed by multiple rounds of engineering that yielded a series of variants with enhanced catalytic performance. Ultimately, the gram-scale synthesis of <em>R</em>-<strong>1d</strong> and <strong>12d</strong> was conducted, achieving the space–time yields (STY) of 24 and 32 g/L·h, respectively. This study provides practical biocatalysts for the synthesis of chiral β-amino aryl ethers, along with insights into the relationship between the enzyme-substrate binding pocket and substrate selectivity.</div></div>","PeriodicalId":258,"journal":{"name":"Bioresource Technology","volume":"443 ","pages":"Article 133802"},"PeriodicalIF":9.0,"publicationDate":"2025-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145773111","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-15DOI: 10.1016/j.biortech.2025.133801
Haiyan Yu , Bolin Liu , Xue Han , Jingru Yang , Yulong Li , Xiaoxuan Bai , Yanli Jia , Shang Li , Liansheng Zhao , Yulu Wang , Fengjiao Xin
Xylan represents a promising resource for generating high-value bioproducts in lignocellulosic biorefineries. Nevertheless, the intricate structure of xylan poses challenges for its degradation, requiring the synergistic action of specialized side-chain cleaving enzymes to enhance the efficiency of endo-xylanases. In this study, we identified and characterized a novel acetylxylan esterase (BtAcXE) from Bacteroides thetaiotaomicron VPI-5482, featuring a unique dual-catalytic domain architecture comprising an N-terminal CE1 domain (NTD) and a C-terminal CE3 domain (CTD). BtAcXE exhibited remarkable activity of 6864.1 ± 745.6 U/mg against p-nitrophenylacetate, exceeding that of the individual NTD and CTD enzymes, as well as an equimolar mixture of both domains. Furthermore, supplementing xylanase with BtAcXE enhanced the hydrolysis of birchwood xylan by 1.9-fold, yielding up to 0.182 ± 0.003 g/g acetic acid and 0.304 ± 0.029 g/g reducing sugars, respectively. Acetic acid yields of 0.019–0.058 g/g were further achieved from more complex pretreated lignocellulosic feedstocks. Notably, the native dual-domain structure of BtAcXE conferred inter-domain synergy, resulting in an overall increase in the release of both acetic acid and reducing sugars. This study establishes BtAcXE as a highly efficient Axe with substantial potential for enhancing the high-value utilization of lignocellulosic biomass and provides valuable insights for designing and applying multicatalytic-domain xylanolytic enzymes.
{"title":"Simultaneous production of xylooligosaccharides and acetic acid from xylan-rich biomass by an acetylxylan esterase with two synergistic catalytic domains","authors":"Haiyan Yu , Bolin Liu , Xue Han , Jingru Yang , Yulong Li , Xiaoxuan Bai , Yanli Jia , Shang Li , Liansheng Zhao , Yulu Wang , Fengjiao Xin","doi":"10.1016/j.biortech.2025.133801","DOIUrl":"10.1016/j.biortech.2025.133801","url":null,"abstract":"<div><div>Xylan represents a promising resource for generating high-value bioproducts in lignocellulosic biorefineries. Nevertheless, the intricate structure of xylan poses challenges for its degradation, requiring the synergistic action of specialized side-chain cleaving enzymes to enhance the efficiency of <em>endo</em>-xylanases. In this study, we identified and characterized a novel acetylxylan esterase (<em>Bt</em>AcXE) from <em>Bacteroides thetaiotaomicron</em> VPI-5482, featuring a unique dual-catalytic domain architecture comprising an <em>N</em>-terminal CE1 domain (NTD) and a C-terminal CE3 domain (CTD). <em>Bt</em>AcXE exhibited remarkable activity of 6864.1 ± 745.6 U/mg against <em>p</em>-nitrophenylacetate, exceeding that of the individual NTD and CTD enzymes, as well as an equimolar mixture of both domains. Furthermore, supplementing xylanase with <em>Bt</em>AcXE enhanced the hydrolysis of birchwood xylan by 1.9-fold, yielding up to 0.182 ± 0.003 g/g acetic acid and 0.304 ± 0.029 g/g reducing sugars, respectively. Acetic acid yields of 0.019–0.058 g/g were further achieved from more complex pretreated lignocellulosic feedstocks. Notably, the native dual-domain structure of <em>Bt</em>AcXE conferred inter-domain synergy, resulting in an overall increase in the release of both acetic acid and reducing sugars. This study establishes <em>Bt</em>AcXE as a highly efficient Axe with substantial potential for enhancing the high-value utilization of lignocellulosic biomass and provides valuable insights for designing and applying multicatalytic-domain xylanolytic enzymes.</div></div>","PeriodicalId":258,"journal":{"name":"Bioresource Technology","volume":"443 ","pages":"Article 133801"},"PeriodicalIF":9.0,"publicationDate":"2025-12-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145773118","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-14DOI: 10.1016/j.biortech.2025.133795
Shuying Geng , Fuqiang Fan , Zile Han , Suzhen Yin , Wei Cao , Guangming Xu , Aizhong Ding , Feiyong Chen , Shushuai Mao , Junfeng Dou
Biochar-immobilized microorganisms (BIM) have demonstrated significant potential in bioremediating polycyclic aromatic hydrocarbon (PAH)-contaminated soils, whereas the fate of substituted PAHs (SPAHs) and mechanisms underlying microbial community responses remain underexplored. This study evaluated the occurrence and health risks of PAHs/SPAHs in historically contaminated soils treated with rice husk-derived biochar-immobilized Rhodococcus, while elucidating the succession dynamics of microbial communities. Results showed that BIM achieved efficient removal of PAHs (70.53 %) and SPAHs (38.22 %) within 180 days, exhibiting degradation hierarchies (P < 0.05, ANOVA with Tukey’s HSD) of low molecular weight (LMW) PAHs > high molecular weight PAHs and oxygenated PAHs (OPAHs) > nitrogenated PAHs (NPAHs). Additionally, the remediation process revealed a transformation trend from parent PAHs to OPAHs, suggesting oxidative degradation as the predominant pathway. Post-remediation, the carcinogenic risk of soil PAHs/SPAHs decreased to negligible levels (9.62E-11 to 8.49E-06). Microbial community responses highlighted differential sensitivities. Bacterial diversity showed the greatest responsiveness to BIM, experiencing structural fluctuations during the initial phase before stabilizing. Fungal community structure displayed continuous fluctuations throughout the entire remediation period, while archaeal community structure maintained high stability. During remediation, inter-domain molecular ecological networks displayed enhanced robustness and mutualistic interactions in Phase I (0–60 days), while resource competition intensified over time. Bacteria and fungi emerged as keystone taxa within these networks. Specific soil physicochemical factors, LMW PAHs and NPAHs were identified as key environmental factors driving the deterministic assembly and microbial community succession. This study advances our understanding of the potential applications of BIM in the remediation of PAH-contaminated soil.
{"title":"Biochar-immobilized microorganisms drive removal and transformation of polycyclic aromatic hydrocarbons and their derivatives in soil: Efficiency and microbial succession dynamics","authors":"Shuying Geng , Fuqiang Fan , Zile Han , Suzhen Yin , Wei Cao , Guangming Xu , Aizhong Ding , Feiyong Chen , Shushuai Mao , Junfeng Dou","doi":"10.1016/j.biortech.2025.133795","DOIUrl":"10.1016/j.biortech.2025.133795","url":null,"abstract":"<div><div>Biochar-immobilized microorganisms (BIM) have demonstrated significant potential in bioremediating polycyclic aromatic hydrocarbon (PAH)-contaminated soils, whereas the fate of substituted PAHs (SPAHs) and mechanisms underlying microbial community responses remain underexplored. This study evaluated the occurrence and health risks of PAHs/SPAHs in historically contaminated soils treated with rice husk-derived biochar-immobilized <em>Rhodococcus</em>, while elucidating the succession dynamics of microbial communities. Results showed that BIM achieved efficient removal of PAHs (70.53 %) and SPAHs (38.22 %) within 180 days, exhibiting degradation hierarchies (<em>P</em> < 0.05, ANOVA with Tukey’s HSD) of low molecular weight (LMW) PAHs > high molecular weight PAHs and oxygenated PAHs (OPAHs) > nitrogenated PAHs (NPAHs). Additionally, the remediation process revealed a transformation trend from parent PAHs to OPAHs, suggesting oxidative degradation as the predominant pathway. Post-remediation, the carcinogenic risk of soil PAHs/SPAHs decreased to negligible levels (9.62E-11 to 8.49E-06). Microbial community responses highlighted differential sensitivities. Bacterial diversity showed the greatest responsiveness to BIM, experiencing structural fluctuations during the initial phase before stabilizing. Fungal community structure displayed continuous fluctuations throughout the entire remediation period, while archaeal community structure maintained high stability. During remediation, inter-domain molecular ecological networks displayed enhanced robustness and mutualistic interactions in Phase I (0–60 days), while resource competition intensified over time. Bacteria and fungi emerged as keystone taxa within these networks. Specific soil physicochemical factors, LMW PAHs and NPAHs were identified as key environmental factors driving the deterministic assembly and microbial community succession. This study advances our understanding of the potential applications of BIM in the remediation of PAH-contaminated soil.</div></div>","PeriodicalId":258,"journal":{"name":"Bioresource Technology","volume":"443 ","pages":"Article 133795"},"PeriodicalIF":9.0,"publicationDate":"2025-12-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145753365","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-13DOI: 10.1016/j.biortech.2025.133793
Yunxia Ma , Xinrui Chang , Jiajia Zhang , Lei Wang , Hu Li , Tiecheng Wang
Microplastics (MPs) and antibiotic resistance genes (ARGs) are emerging global pollutants, but the impact of MPs on plasmid-mediated conjugative transfer (CTF) of ARGs remains poorly understood. This study investigates the impact of polyethylene (PE), polystyrene (PS), and polypropylene (PP) on the plasmid-mediated CTF of the RP4 plasmid in E. coli. PE (5 mg/L, 1000 nm) exhibited the highest CTF (5.96 × 10−7), which was 8.9-fold greater than that of the control. Exposure to MPs upregulated genes involved in ROS generation, energy metabolism, membrane integrity, stress responses, and various transcriptional regulatory genes critical for plasmid transfer. Among the MPs tested, PE showed the highest affinity for ARGs adsorption, which can be attributed to its hydrophobicity and negative surface charge, enhancing microbial adhesion and the spread of ARGs. Molecular docking and density functional theory analyses demonstrated that the flexible structure, charge distribution, and frontier orbital characteristics of PE stabilized interactions with membrane components and reduced the energy barrier (–3.626 kcal/mol) for plasmid translocation. Structural equation modeling identified cell contact (19.79-fold increase) and energy supply (11.5-fold increase) as key factors driving CTF. These findings offer mechanistic insights into MPs-facilitated ARGs propagation, highlighting the potential ecological and public health risks associated with MP contamination.
{"title":"Microplastics promote conjugative transfer of antibiotic resistance genes via membrane protein interactions: Highlighting oxidative stress and energy supply","authors":"Yunxia Ma , Xinrui Chang , Jiajia Zhang , Lei Wang , Hu Li , Tiecheng Wang","doi":"10.1016/j.biortech.2025.133793","DOIUrl":"10.1016/j.biortech.2025.133793","url":null,"abstract":"<div><div>Microplastics (MPs) and antibiotic resistance genes (ARGs) are emerging global pollutants, but the impact of MPs on plasmid-mediated conjugative transfer (CTF) of ARGs remains poorly understood. This study investigates the impact of polyethylene (PE), polystyrene (PS), and polypropylene (PP) on the plasmid-mediated CTF of the RP4 plasmid in <em>E. coli</em>. PE (5 mg/L, 1000 nm) exhibited the highest CTF (5.96 × 10<sup>−7</sup>), which was 8.9-fold greater than that of the control. Exposure to MPs upregulated genes involved in ROS generation, energy metabolism, membrane integrity, stress responses, and various transcriptional regulatory genes critical for plasmid transfer. Among the MPs tested, PE showed the highest affinity for ARGs adsorption, which can be attributed to its hydrophobicity and negative surface charge, enhancing microbial adhesion and the spread of ARGs. Molecular docking and density functional theory analyses demonstrated that the flexible structure, charge distribution, and frontier orbital characteristics of PE stabilized interactions with membrane components and reduced the energy barrier (–3.626 kcal/mol) for plasmid translocation. Structural equation modeling identified cell contact (19.79-fold increase) and energy supply (11.5-fold increase) as key factors driving CTF. These findings offer mechanistic insights into MPs-facilitated ARGs propagation, highlighting the potential ecological and public health risks associated with MP contamination.</div></div>","PeriodicalId":258,"journal":{"name":"Bioresource Technology","volume":"443 ","pages":"Article 133793"},"PeriodicalIF":9.0,"publicationDate":"2025-12-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145753419","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-13DOI: 10.1016/j.biortech.2025.133794
G.Roshna Parveen , Rangabhashiyam Selvasembian
Heavy metal pollution is intensifying due to rapid industrialization, especially near industries such as mining, battery manufacturing, metal plating, tanneries, and textiles, where untreated wastewater releases toxic metals like chromium, cadmium, lead, and mercury. These metals persist in the environment and pose severe risks to aquatic life, soil health, and human populations through contamination of water and food sources. In response, microalgae have emerged as promising approach owing to their ability for heavy metal detoxification. Microalgae have shown significant potential in mitigating heavy metal pollution via extracellular adsorption, chelation, and sequestration. It employs a range of extracellular and intracellular mechanisms to reduce metal toxicity, including surface adsorption via extracellular polymeric substances , intracellular chelation by metal-binding proteins such as glutathione and metallothioneins, and sequestration through metal transporter systems. Exposure to heavy metals induces oxidative stress, prompting the activation of enzymatic and non-enzymatic antioxidant defences. Additionally, phytohormones modulate stress responses and enhance detoxification pathways. This review aims to comprehensively elucidate how microalgae interact with heavy metals, ranging from EPS- mediated adsorption at the cell surface to active intracellular chelation and sequestration. Furthermore, it presents biochemical and physiological responses underlying microalgae’s responses to heavy metals, including antioxidant defence systems and phytohormonal regulation.
{"title":"Microalgae under heavy metal stress: mechanistic insights into detoxification mechanism and antioxidant defence system","authors":"G.Roshna Parveen , Rangabhashiyam Selvasembian","doi":"10.1016/j.biortech.2025.133794","DOIUrl":"10.1016/j.biortech.2025.133794","url":null,"abstract":"<div><div>Heavy metal pollution is intensifying due to rapid industrialization, especially near industries such as mining, battery manufacturing, metal plating, tanneries, and textiles, where untreated wastewater releases toxic metals like chromium, cadmium, lead, and mercury. These metals persist in the environment and pose severe risks to aquatic life, soil health, and human populations through contamination of water and food sources. In response, microalgae have emerged as promising approach owing to their ability for heavy metal detoxification. Microalgae have shown significant potential in mitigating heavy metal pollution via extracellular adsorption, chelation, and sequestration. It employs a range of extracellular and intracellular mechanisms to reduce metal toxicity, including surface adsorption via extracellular polymeric substances , intracellular chelation by metal-binding proteins such as glutathione and metallothioneins, and sequestration through metal transporter systems. Exposure to heavy metals induces oxidative stress, prompting the activation of enzymatic and non-enzymatic antioxidant defences. Additionally, phytohormones modulate stress responses and enhance detoxification pathways. This review aims to comprehensively elucidate how microalgae interact with heavy metals, ranging from EPS- mediated adsorption at the cell surface to active intracellular chelation and sequestration. Furthermore, it presents biochemical and physiological responses underlying microalgae’s responses to heavy metals, including antioxidant defence systems and phytohormonal regulation.</div></div>","PeriodicalId":258,"journal":{"name":"Bioresource Technology","volume":"443 ","pages":"Article 133794"},"PeriodicalIF":9.0,"publicationDate":"2025-12-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145753372","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-12-12DOI: 10.1016/j.biortech.2025.133792
Guangyu Cui , Xiaoyi Wu , Xuyang Lei , Ke Huang , Fan Lü , Pinjing He , Qiyong Xu
The plastisphere microbiome plays a critical yet incompletely resolved role in the biodegradation of bioplastics during aerobic composting. Here, we investigated the degradation of poly(butylene adipate-co-terephthalate) (PBAT) by integrating surface physicochemical characterization with high-throughput microbial profiling under simulated industrial composting conditions. Inoculant amendment significantly enhanced PBAT degradation, yielding a 12.7 % carbon loss compared with 3.2 % in the control. Gel permeation chromatography further confirmed polymer depolymerization, showing pronounced declines in molecular weight (particularly Mz). These structural changes were accompanied by accelerated ester bond hydrolysis, reflected by reduced water contact angle and attenuation of the CO stretching peak. Plastisphere succession revealed that inoculants reshaped surface-associated communities, increasing α-diversity and selectively enriching thermophilic taxa. Temporal community shifts suggested stage-dependent contributions, with hydrolytic genera (Bacillus, Lactobacillus) dominating the thermophilic phase, whereas oxidative taxa (Pseudomonas) became more prominent during maturation. Neutral community model analysis indicated that plastisphere assembly followed a largely deterministic pattern linked to compost stabilization parameters. Although direct functional validation was not performed, the study reveals correlated changes among PBAT depolymerization, surface hydrolysis/oxidation, and plastisphere restructuring. On this basis, we propose a conceptual degradation framework while emphasizing that specific enzymatic pathways and microbial functions require future confirmation. These findings advance understanding of biopolymer-microbe interactions and provide guidance for optimizing inoculant-assisted composting of biodegradable plastics.
{"title":"Bioaugmentation influences PBAT biodegradation patterns during composting through associated shifts in plastisphere communities and surface properties","authors":"Guangyu Cui , Xiaoyi Wu , Xuyang Lei , Ke Huang , Fan Lü , Pinjing He , Qiyong Xu","doi":"10.1016/j.biortech.2025.133792","DOIUrl":"10.1016/j.biortech.2025.133792","url":null,"abstract":"<div><div>The plastisphere microbiome plays a critical yet incompletely resolved role in the biodegradation of bioplastics during aerobic composting. Here, we investigated the degradation of poly(butylene adipate-<em>co</em>-terephthalate) (PBAT) by integrating surface physicochemical characterization with high-throughput microbial profiling under simulated industrial composting conditions. Inoculant amendment significantly enhanced PBAT degradation, yielding a 12.7 % carbon loss compared with 3.2 % in the control. Gel permeation chromatography further confirmed polymer depolymerization, showing pronounced declines in molecular weight (particularly Mz). These structural changes were accompanied by accelerated ester bond hydrolysis, reflected by reduced water contact angle and attenuation of the C<img>O stretching peak. Plastisphere succession revealed that inoculants reshaped surface-associated communities, increasing α-diversity and selectively enriching thermophilic taxa. Temporal community shifts suggested stage-dependent contributions, with hydrolytic genera (<em>Bacillus</em>, <em>Lactobacillus</em>) dominating the thermophilic phase, whereas oxidative taxa (<em>Pseudomonas</em>) became more prominent during maturation. Neutral community model analysis indicated that plastisphere assembly followed a largely deterministic pattern linked to compost stabilization parameters. Although direct functional validation was not performed, the study reveals correlated changes among PBAT depolymerization, surface hydrolysis/oxidation, and plastisphere restructuring. On this basis, we propose a conceptual degradation framework while emphasizing that specific enzymatic pathways and microbial functions require future confirmation. These findings advance understanding of biopolymer-microbe interactions and provide guidance for optimizing inoculant-assisted composting of biodegradable plastics.</div></div>","PeriodicalId":258,"journal":{"name":"Bioresource Technology","volume":"443 ","pages":"Article 133792"},"PeriodicalIF":9.0,"publicationDate":"2025-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145731961","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}