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Wearable technology for one health: Charting the course of dermal biosensing 可穿戴技术促进 "一体健康":绘制皮肤生物传感路线图
IF 10.61 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-05-23 DOI: 10.1016/j.biosx.2024.100500
Georgeta Vulpe , Guoyi Liu , Sam Oakley , Dimitrios Pletsas , Guanghao Yang , Rosa Dutra , Owen Guy , Yufei Liu , Mark Waldron , Joe Neary , Arjun Ajith Mohan , Sanjiv Sharma

Over the last decade, a significant paradigm shift has been observed towards leveraging less invasive biological fluids—such as skin interstitial fluid (ISF), sweat, tears, and saliva—for health monitoring. This evolution seeks to transcend traditional, invasive blood-based methods, offering a more accessible approach to health monitoring for non-specialized personnel. Skin ISF, with its profound resemblance to blood, emerges as a pivotal medium for the real-time, minimally invasive tracking of a broad spectrum of biomarkers, thus becoming an invaluable asset for correlating with blood-based data. Our exploration delves deeply into the development of wearable molecular biosensors, spotlighting dermal sensors for their pivotal roles across both clinical and everyday health monitoring scenarios and underscoring their contributions to the holistic One Health initiative. In bringing forward the myriad challenges that permeate this field, we also project future directions, notably the potential of skin ISF as a promising candidate for continuous health tracking.

Moreover, this paper aims to catalyse further exploration and innovation by presenting a curated selection of seminal technological advancements. Amidst the saturated landscape of analytical literature on translational challenges, our approach distinctly seeks to highlight recent developments. In attracting a wider spectrum of research groups to this versatile domain, we endeavour to broaden the collective understanding of its trajectory and potential, mapping the evolution of wearable biosensor technology. This strategy not only illuminates the transformative impact of wearable biosensors in reshaping health diagnostics and personalized medicine but also fosters increased participation and progress within the field. Distinct from recent manuscripts in this domain, our review serves as a distillation of key concepts, elucidating pivotal papers that mark the latest advancements in wearable sensors. Through presenting a curated collection of landmark studies and offering our perspectives on the challenges and forward paths, this paper seeks to guide new entrants in the area. We delineate a division between wearable epidermal and subdermal sensors—focusing on the latter as the future frontier—thereby establishing a unique discourse within the ongoing narrative on wearable sensing technologies.

在过去十年中,人们观察到一种重要的模式转变,即利用侵入性较小的生物液体(如皮肤间质、汗液、泪液和唾液)进行健康监测。这一演变旨在超越传统的侵入性血液方法,为非专业人员提供更便捷的健康监测方法。皮肤 ISF 与血液极为相似,是实时、微创跟踪各种生物标志物的关键媒介,因此成为与血液数据相关联的宝贵资产。我们深入探讨了可穿戴分子生物传感器的发展,重点关注了皮肤传感器在临床和日常健康监测中的关键作用,并强调了它们对整体 "同一健康 "计划的贡献。在提出这一领域所面临的无数挑战的同时,我们还预测了未来的发展方向,特别是皮肤 ISF 作为持续健康跟踪的潜在候选者的潜力。此外,本文还旨在通过介绍精选的开创性技术进展,促进进一步的探索和创新。在有关转化挑战的分析性文献已趋于饱和的情况下,我们的方法旨在突出近期的发展。通过吸引更广泛的研究小组参与这一多才多艺的领域,我们努力拓宽对其发展轨迹和潜力的集体认识,描绘出可穿戴生物传感器技术的发展历程。这一战略不仅阐明了可穿戴生物传感器在重塑健康诊断和个性化医疗方面的变革性影响,还促进了该领域内更多的参与和进步。有别于该领域的最新稿件,我们的综述提炼了关键概念,阐明了标志着可穿戴传感器最新进展的重要文献。本文通过介绍一系列具有里程碑意义的研究,并提出我们对挑战和前进道路的看法,旨在为该领域的新进入者提供指导。我们对可穿戴表皮传感器和皮下传感器进行了划分--重点关注作为未来前沿的皮下传感器--从而在当前关于可穿戴传感技术的论述中建立起独特的话语体系。
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引用次数: 0
Towards monitoring of critical illness via the detection of histones with extended gate field-effect transistor sensors 利用扩展栅场效应晶体管传感器检测组蛋白,实现危重病监测
IF 10.61 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-05-23 DOI: 10.1016/j.biosx.2024.100501
Hayley Richardson , Jeffrey Barahona , Greg Medwig , Angela Johns , Lina M. Acosta Pérez , Koji Sode , Michael Daniele , Francis J. Miller , Edgar Lobaton , Spyridon Pavlidis

Extracellular histone proteins in the blood indicate a heightened risk of morbidity after trauma or in major illnesses such as sepsis. We present the development of an aptasensor for histone detection with an extended gate field-effect transistor (EGFET) configuration, which benefits from low power consumption, rapid response, and compatibility with miniaturized gold electrodes. Histones have a high isoelectric point and charge density, which cause them to physically adsorb to non-specific elements of the sensor that have available electrostatic charges. To combat this, the sensing surface is formed with a thiol-modified, high-affinity and histone-specific RNA aptamer sequence and by co-immobilizing with poly(ethylene glycol) methyl ether thiol (PEG) as a blocking agent. Surface plasmon resonance (SPR) is used to analyze aptamer and PEG immobilization strategies, confirm histone binding, and calculate kinetic binding constants. Through comparison of different blocking agents and time-dependent preparation, the ideal equilibrium dissociation constant (KD) is estimated to be below 200 pM, which is the upper range of extracellular histone concentrations in critically ill patients with high mortality. The EGFET sensitivity of the optimized aptasensor is 6.65 mV/decade concentration change for histone H4 with a physiologically relevant 5 pM limit of detection. Selectivity tests with 100 nM bovine serum albumin (BSA) demonstrate a signal response that is 13-fold smaller than for histones. This EGFET aptasensor platform is suitable for future point-of-care monitoring of histone levels in critically ill patients, thus permitting the early detection of increased risk and the need for more aggressive interventional measures to prevent mortality.

血液中的细胞外组蛋白预示着创伤后或败血症等重大疾病的发病风险增高。我们介绍了利用扩展栅场效应晶体管(EGFET)配置开发的组蛋白检测灵敏传感器,该传感器具有功耗低、响应快以及与微型金电极兼容等优点。组蛋白具有较高的等电点和电荷密度,因此会吸附在传感器上具有可用静电荷的非特异性元件上。为解决这一问题,传感表面由硫醇修饰的高亲和性组蛋白特异性 RNA 合酶序列和作为阻断剂的聚乙二醇甲醚硫醇(PEG)共同固定而成。表面等离子体共振(SPR)用于分析适配体和 PEG 的固定策略、确认组蛋白结合以及计算动力学结合常数。通过比较不同的阻断剂和随时间变化的制备方法,理想的平衡解离常数(KD)估计低于 200 pM,而这正是死亡率较高的重症患者细胞外组蛋白浓度的上限范围。对组蛋白 H4 来说,优化后的适配传感器的 EGFET 灵敏度为 6.65 mV/十进制浓度变化,生理检测限为 5 pM。用 100 nM 牛血清白蛋白(BSA)进行的选择性测试表明,信号响应比组蛋白小 13 倍。这种 EGFET aptasensor 平台适用于未来对危重病人组蛋白水平的护理点监测,从而能够及早发现风险增加的情况,并需要采取更积极的干预措施来预防死亡。
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引用次数: 0
Recent advancements in microfluidic-based biosensors for detection of genes and proteins: Applications and techniques 用于检测基因和蛋白质的微流控生物传感器的最新进展:应用与技术
IF 10.61 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-05-22 DOI: 10.1016/j.biosx.2024.100489
Saeed Siavashy , M. Soltani , Shayan Rahimi , Mehraveh Hosseinali , Zahra Guilandokht , Kaamran Raahemifar

This article has tried to provide an overview of the most sophisticated microfluidic biosensors for identifying nucleic acids and proteins at the site of treatment. Microfluidics, which also automates sample preparation and reduces processing time and reagent consumption, enables the analysis of small sample quantities. Microfluidics and biosensor technologies collaborate to provide diagnostics at the point of care with high throughput analysis, portability, and disposability. The high sensitivity and selectivity requirements, false response errors, and integration with other essential modules are some of the challenges posed by this merger. The broad categories of protein-based and DNA-based biosensor technology are covered in this review. Also, recent advancements in coupling the biosensors to microfluidics, the main challenges and potential solutions in deploying microfluidic biosensors for point-of-care diagnostics, and the most recent developments in these areas have been discussed.

本文试图概述用于鉴定治疗部位核酸和蛋白质的最先进的微流控生物传感器。微流控技术还能自动进行样品制备,减少处理时间和试剂消耗,从而实现对少量样品的分析。微流控技术与生物传感器技术相结合,可在医疗点提供诊断服务,具有高通量分析、便携性和可抛弃性等特点。高灵敏度和高选择性要求、错误响应误差以及与其他重要模块的整合是这一合并带来的部分挑战。本综述涵盖了基于蛋白质和 DNA 的生物传感器技术两大类。此外,还讨论了将生物传感器与微流控技术相结合的最新进展、将微流控生物传感器用于床旁诊断的主要挑战和潜在解决方案,以及这些领域的最新发展。
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引用次数: 0
A digital microfluidic device integrated with electrochemical sensor and 3D matrix for detecting soluble PD-L1 用于检测可溶性 PD-L1 的集成了电化学传感器和 3D 矩阵的数字微流控装置
IF 10.61 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-05-17 DOI: 10.1016/j.biosx.2024.100490
Yuqian Zhang , Jing Liu , Ting-Wen Lo , Yohan Kim , Fabrice Lucien , Haidong Dong , Yuguang Liu

PD1/PD-L1 checkpoint inhibitors are at the forefront of cancer immunotherapies. However, the overall response rate remains only 10–30%. Even among initial responders, drug resistance often occurs, which can lead to prolonged use of a futile therapy in the race with the fatal disease. It would be ideal to closely monitor key indicators of patients’ immune responsiveness, such as circulating PD-L1 levels. Traditional PD-L1 detection methods, such as ELISA, are limited in sensitivity and rely on core lab facilities, preventing their use for the regular monitoring. Electrochemical sensors exist as an attractive candidate for point-of-care tool, yet, streamlining multiple processes in a single platform remains a challenge. To overcome this challenge, this work integrated electrochemical sensor arrays into a digital microfluidic device to combine their distinct merits, so that soluble PD-L1 (sPD-L1) molecules can be rapidly detected in a programmed and automated manner. This new platform featured microscale electrochemical sensor arrays modified with electrically conductive 3D matrix, and can detect as low as 1 pg/mL sPD-L1 with high specificity. The sensors also have desired repeatability and can obtain reproducible results on different days. To demonstrate the functionality of the device to process more complex biofluids, we used the device to detect sPD-L1 molecules secreted by human breast cancer cell line in culture media directly and observed 2X increase in signal compared with control experiment. This novel platform holds promise for the close monitoring of sPD-L1 level in human physiological fluids to evaluate the efficacy of PD-1/PD-L1 immunotherapy.

PD1/PD-L1 检查点抑制剂是癌症免疫疗法的前沿。然而,总体反应率仍然只有 10%-30%。即使在最初的应答者中,也经常会出现耐药性,这可能会导致在与致命疾病的赛跑中长期使用一种徒劳无益的疗法。理想的做法是密切监测患者免疫反应性的关键指标,如循环 PD-L1 水平。传统的 PD-L1 检测方法(如 ELISA)灵敏度有限,而且依赖于核心实验室设施,无法用于定期监测。电化学传感器是一种极具吸引力的候选床旁检测工具,但在单一平台上简化多个流程仍是一项挑战。为了克服这一挑战,这项研究将电化学传感器阵列集成到一个数字微流控装置中,结合了它们各自的优点,从而能以程序化和自动化的方式快速检测可溶性 PD-L1 (sPD-L1)分子。这种新平台的特点是微尺度电化学传感器阵列经导电三维基质修饰,可检测低至1 pg/mL的sPD-L1,并具有高度特异性。该传感器还具有理想的可重复性,可在不同日期获得可重复的结果。为了展示该装置处理更复杂生物流体的功能,我们使用该装置直接检测培养基中人类乳腺癌细胞系分泌的 sPD-L1 分子,观察到信号比对照实验增加了 2 倍。这种新型平台有望密切监测人体体液中的 sPD-L1 水平,从而评估 PD-1/PD-L1 免疫疗法的疗效。
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引用次数: 0
A novel aptamer-antibody sandwich electrochemical sensor for detecting ADAR1 in complex biological samples 用于检测复杂生物样品中 ADAR1 的新型适配体-抗体夹心电化学传感器
IF 10.61 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-05-16 DOI: 10.1016/j.biosx.2024.100491
Madhu Biyani , Kirti Sharma , Maeda Shoei , Hinako Akashi , Masataka Nakano , Miki Nakajima , Manish Biyani

Human adenosine deaminase acting on RNA1 (ADAR1) is an adenosine-to-inosine (A-to-I) RNA-editing enzyme involved in various types of cancer progression. ADAR1 has emerged as a novel prognostic biomarker for cancer. This study describes the application of a newly identified 70-nt DNA aptamer (Apt38483) against ADAR1 to develop a portable and simple electrochemical biosensor platform for the rapid and sensitive detection of ADAR1 in cell lysates. We selected an ADAR1-specific DNA aptamer from a randomized 70-nt single-stranded DNA library using a competitive in vitro selection method. ADAR1 in the cell lysate was sandwiched onto a bare carbon working electrode of an electro-chemically printed chip between the ADAR1 antibody and gold nanoparticles (40 nm) conjugated with Apt38483, followed by electrochemical analysis using differential pulse voltammetry (DPV) for sensor demonstration. A highly sensitive change in current was observed for as little as 0.53 nM ADAR1 in human embryonic kidney cell lysate. Thus, the merging of a novel DNA aptamer probe for ADAR1 with an electrochemical transduction method enabled the development of a simple, low-cost, and rapid method for the direct measurement of ADAR1 in cell lysates and indicated great potential for the development of an ADAR1 analysis platform, which would be useful in cancer prognosis.

作用于 RNA1 的人类腺苷脱氨酶(ADAR1)是一种腺苷转化为肌苷(A-to-I)的 RNA 编辑酶,与各种癌症进展有关。ADAR1 已成为一种新型的癌症预后生物标志物。本研究介绍了应用新发现的针对 ADAR1 的 70-nt DNA 类似物(Apt38483)开发便携式简易电化学生物传感器平台,用于快速灵敏地检测细胞裂解物中的 ADAR1。我们采用竞争性体外选择方法,从随机 70-nt 单链 DNA 文库中筛选出了 ADAR1 特异性 DNA 类似物。将细胞裂解液中的 ADAR1 夹在电化学印刷芯片的裸炭工作电极上,在 ADAR1 抗体和与 Apt38483 共轭的金纳米粒子(40 nm)之间,然后使用差分脉冲伏安法(DPV)进行电化学分析,以演示传感器。在人类胚胎肾细胞裂解物中,只要 0.53 nM ADAR1 就能观察到高灵敏度的电流变化。因此,将 ADAR1 的新型 DNA 类似物探针与电化学转导方法相结合,开发出了一种简单、低成本、快速的直接测量细胞裂解物中 ADAR1 的方法,这表明 ADAR1 分析平台的开发具有巨大潜力,将有助于癌症预后。
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引用次数: 0
Biocompatible cdots dual role: Nanophotosensitizers for hypoxic photodynamic therapy and scavenging nanozyme biosensing 生物相容性镉点的双重作用:用于缺氧光动力疗法和清除纳米酶生物传感的纳米光敏剂
IF 10.61 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-05-16 DOI: 10.1016/j.biosx.2024.100499
Helena M.R. Gonçalves , Susana A.F. Neves , Sabela Rodriguez , Rui F.P. Pereira , Rui Vilarinho , Tânia Moniz , Maria Rangel , J. Agostinho Moreira , Paula Martins-Lopes , Filomena Adega , Frank Davis , Séamus P.J. Higson , Marita A. Cardoso

Within this study we report a non-toxic nanomaterial suitable for Photodynamic Therapy (PDT) under hypoxic conditions. PDT relies on the production of reactive oxygen and nitrogen species that can lead to cancer cells death. Currently, PDT is limited by: the development of efficient photosensitizers that can produce these radicals in situ; and the oxygen level requirement. The produced Carbon Dots (Cdots) successfully destroy human melanoma cancer cells upon 5 min irradiation using 450 nm wavelength due to the in situ production of NO•. As such, this nanophotosensitizer is applicable regardless of the cells molecular oxygen levels. Additionally, this nanomaterial acts as a scavenging nanozyme biosensor allowing to follow-up, in situ, the released NO• concentration, thereby offering a tight control over the NO• concentration in real-time and, its maintenance within the therapeutic window. Hence, this work offers a novel theranostic and NO• scavenging nanozyme biosensing nanoplatform that allows high control for hypoxic-PDT cancer application even in low doses and with 5 min irradiation.

在这项研究中,我们报告了一种适用于缺氧条件下光动力疗法(PDT)的无毒纳米材料。光动力疗法依赖于活性氧和氮物种的产生,而活性氧和氮物种可导致癌细胞死亡。目前,光动力疗法受到以下因素的限制:能在原位产生这些自由基的高效光敏剂的开发;以及对氧气水平的要求。利用 450 纳米波长照射 5 分钟后,生成的碳点(Cdots)会在原位产生 NO-,从而成功摧毁人类黑色素瘤癌细胞。因此,这种纳米光敏剂适用于任何分子氧水平的细胞。此外,这种纳米材料还可作为清除纳米酶生物传感器,对释放的 NO- 浓度进行原位跟踪,从而对 NO- 浓度进行实时严格控制,并将其维持在治疗窗口内。因此,这项工作提供了一种新型治疗和清除 NO- 的纳米酶生物传感纳米平台,即使在低剂量和 5 分钟照射的情况下,也能对缺氧-PDT 癌症应用进行高度控制。
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引用次数: 0
Metal-organic frameworks as an active substrate for cell-interaction studies and cell-on-a-chip platforms 金属有机框架作为细胞相互作用研究和片上细胞平台的活性基底
IF 10.61 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-05-11 DOI: 10.1016/j.biosx.2024.100487
Huijie Jiang , Ziyu Gao , Claudia Lubrano , Claudia Latte Bovio , Henning Bommes , Andrea Kauth , Lea Baumann , Bo Cheng , Divagar Murugan , Joachim Knoch , Rainer Waser , Sven Ingebrandt , Francesca Santoro , Vivek Pachauri

Metal-organic frameworks (MOFs) are an emerging class of nanomaterials with immense biomedical potential for their unique interactions with biological and organic materials. In this work, we select two candidate two-dimensional (2D) MOF systems based on Fe3+ and Ni2+ metal centers and 2-aminoterephthalate acid ligand (Fe-MOF and Ni-MOF) and evaluate their performance as an active interface for study of cell-interactions. 2D Fe-MOF and Ni-MOF were synthesized onto hydroxyl-modified gold and glass substrates using a layer-by-layer liquid-phase-epitaxy (LbL-LPE) growth at room temperature and used as active substrates (Fe-MOF/glass, Fe-MOF/Au, Ni-MOF/glass and Ni-MOF/Au, respectively) for MTT cell-proliferation and reactive oxygen species tests using the PC-12 cell-line in order to investigate the biocompatibility. Immunostaining and morphological analyses of PC-12 cells on MOF interfaces suggested a stronger cell-substrate interaction in comparison to glass and were further characterized using the Electrical Cell-substrate Impedance Sensing (ECIS) technique, here for the first time, employed to study cell attachment, spreading and proliferation on 2D Fe-MOF. The 2D Fe-MOF showed superior long-term stability in cell culture medium by recording impedance over 24 h, crucial to monitor cell-dynamics at a solid-liquid interface. A significant increase of interfacial impedance was observed in ECIS, due to PC-12 cells adhering onto 2D Fe-MOF, which was also confirmed by the focused ion beam etching followed by scanning electron microscopy. Our novel findings, therefore, suggest 2D MOFs as highly suitable platform for the study of cell-related interactions using electrical techniques and potentially pave the way for future use of MOFs for bioelectronics and biosensor applications.

金属有机框架(MOFs)是一类新兴的纳米材料,因其与生物和有机材料的独特相互作用而具有巨大的生物医学潜力。在这项工作中,我们选择了两种基于 Fe3+ 和 Ni2+ 金属中心以及 2-aminoterephthalate 酸配体的候选二维 (2D) MOF 系统(Fe-MOF 和 Ni-MOF),并评估了它们作为研究细胞相互作用的活性界面的性能。利用逐层液相外延(LbL-LPE)生长法在室温下在羟基改性金和玻璃基底上合成了二维 Fe-MOF 和 Ni-MOF,并将其用作活性基底(分别为 Fe-MOF/玻璃、Fe-MOF/金、Ni-MOF/玻璃和 Ni-MOF/金),使用 PC-12 细胞系进行 MTT 细胞增殖和活性氧测试,以研究其生物相容性。与玻璃相比,MOF 界面上 PC-12 细胞的免疫染色和形态分析表明细胞与基底的相互作用更强,并利用细胞-基底阻抗电感应(ECIS)技术对其进行了进一步表征。通过记录 24 小时的阻抗,二维 Fe-MOF 在细胞培养基中显示出卓越的长期稳定性,这对监测固液界面上的细胞动力学至关重要。由于 PC-12 细胞粘附在二维 Fe-MOF 上,在 ECIS 中观察到界面阻抗明显增加,聚焦离子束蚀刻和扫描电子显微镜也证实了这一点。因此,我们的新发现表明二维 MOFs 非常适合作为利用电学技术研究细胞相关相互作用的平台,并有可能为未来将 MOFs 用于生物电子学和生物传感器应用铺平道路。
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引用次数: 0
Gold nanosheet modified electrode with reduced impedance for electrophysiological recordings 用于电生理记录的阻抗降低的金纳米片修饰电极
IF 10.61 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-05-10 DOI: 10.1016/j.biosx.2024.100485
Mohaddeseh Vafaiee , Farzaneh Aghakhani Mahyari , Asadollah Kalantarian , Mahyar Janahmadi , Raheleh Mohammadpour , Azam Iraji zad , Pezhman Sasanpour

In neurophysiological recording, reducing electrode impedance is crucial for enhancing the signal-to-noise ratio and achieving the desired spatial resolution. This study presents an approach to improve the performance of Au/Cr/glass electrodes by incorporating synthesized gold nanosheets without the need for additional adhesive material. We characterized the performance of the modified electrodes using electrochemical impedance spectroscopy and equivalent circuit analysis. Our findings showed an 81% reduction in mean impedance for the modified electrode, which was 0.85 kΩ at 1 kHz, compared to the unmodified electrode at 4.5 kΩ, an improvement attributed to the higher effective surface area of the modified electrode. Additionally, Scanning electron microscopy observations of PC12 cells cultured on the modified electrodes indicated favorable cell elongation and interaction with the rough surface. Stability studies indicated acceptable performance of the modified electrodes in solution environments. These results suggest that surface modification of electrodes with gold nanosheets could be a promising strategy for enhancing neural interface applications.

在神经生理学记录中,降低电极阻抗对于提高信噪比和实现理想的空间分辨率至关重要。本研究提出了一种无需额外粘合材料,通过加入合成金纳米片来提高金/铬/玻璃电极性能的方法。我们利用电化学阻抗光谱和等效电路分析对改良电极的性能进行了表征。我们的研究结果表明,改性电极的平均阻抗降低了 81%,1 kHz 时为 0.85 kΩ,而未改性电极的平均阻抗为 4.5 kΩ。此外,对在改性电极上培养的 PC12 细胞进行的扫描电子显微镜观察表明,细胞的伸长和与粗糙表面的相互作用都很好。稳定性研究表明,修饰电极在溶液环境中的性能是可以接受的。这些结果表明,用纳米金片对电极进行表面修饰可能是一种很有前途的增强神经接口应用的策略。
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引用次数: 0
A fieldable process for sensitive detection of airborne viruses via electrophoresis-based RNA enrichment 通过基于电泳的 RNA 富集技术灵敏检测空气传播病毒的实用工艺
IF 10.61 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-05-10 DOI: 10.1016/j.biosx.2024.100488
Huifeng Du , Simone Bruno , Kalon J. Overholt , Sebastian Palacios , Hsin-Ho Huang , Carlos Barajas , Ben Gross , Cindy Lee , Haley K. Evile , Nuno Rufino de Sousa , Antonio Gigliotti Rothfuchs , Domitilla Del Vecchio

Sensitive on-site virus detection is a requirement for timely action against the spread of airborne infection since ultra-low in-air viral concentrations can readily infect individuals when inhaled. Here, we consider a fieldable biosensing process that incorporates a fast RNA enrichment step in order to concentrate viral RNA in a small volume prior to RT-qPCR. The enrichment approach uses electrophoresis in an RT-qPCR-compatible buffer, and allows for concentration of RNA by nearly 5-fold within only 10 min. In order to place this performance into context, we analyzed the minimum detectable concentration of a low-cost, fieldable, biosensing process that uses electrostatic precipitation for air sampling, heating for viral RNA extraction, and then RNA enrichment, followed by RT-qPCR. With enrichment, we estimated an in-air concentration of 5,654 genome copies (gc)/m3 with a 100% detection rate and an in-air concentration of 4,221 gc/m3 with a 78.6% detection rate. Given that the concentrations of common viruses, such as influenza and SARS-CoV-2, in several indoor spaces are between 5,800 and 37,000 gc/m3, we conclude that enrichment allows a detection that is sufficiently sensitive for practical applications.

灵敏的现场病毒检测是及时采取措施防止空气传播病毒的必要条件,因为超低的空气中病毒浓度很容易通过吸入感染个人。在此,我们考虑采用一种可现场使用的生物传感工艺,其中包含一个快速 RNA 富集步骤,以便在 RT-qPCR 之前将病毒 RNA 浓缩到一个小体积中。富集方法在 RT-qPCR 兼容的缓冲液中使用电泳,只需 10 分钟就能将 RNA 浓缩近 5 倍。为了使这一性能符合实际情况,我们分析了一种低成本、可现场使用的生物传感过程的最小检测浓度,该过程使用静电沉淀进行空气采样,加热进行病毒 RNA 提取,然后进行 RNA 富集,最后进行 RT-qPCR。通过富集,我们估计空气中的病毒浓度为 5,654 基因组拷贝 (gc)/m3,检出率为 100%;空气中的病毒浓度为 4,221 gc/m3,检出率为 78.6%。鉴于流感和 SARS-CoV-2 等常见病毒在多个室内空间的浓度介于 5,800 至 37,000 gc/m3 之间,我们得出结论:富集后的检测灵敏度足以满足实际应用的需要。
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引用次数: 0
A novel butterfly-shaped core mode-based asymmetric slotted sensor for ultra-high sensitivity in sucrose concentration detection 基于核心模式的新型蝶形非对称开槽传感器,用于蔗糖浓度的超高灵敏度检测
IF 10.61 Q3 Biochemistry, Genetics and Molecular Biology Pub Date : 2024-05-08 DOI: 10.1016/j.biosx.2024.100486
Md.Sen Bin Mustafiz, Md.Arafat Rahman, Nafisa Tasnim, Tanvir Ahmed

In this research, we proposed an asymmetric rectangular slotted biosensor using photonic crystal fiber (PCF), which is subject to surface plasmon resonance (SPR). The proposed sensor utilizes only seven air holes, ensuring better fabrication feasibility and their properties are determined through finite element method (FEM)-based numerical analysis. To simplify the manufacturing process and ensure chemical stability, chemically impermeable gold (Au) strips are employed around the perimeter of the structure as the plasmonic material. With effective structural parameters, the maximum amplitude sensitivity for the proposed sensor is 663.13 RIU1, the maximum wavelength sensitivity is 204,000 nm/RIU, and the maximum wavelength resolution is 4.90 × 10−7 RIU for the y-polarized mode. It also shows a high linearity of 0.9849. For the detection of sucrose content, it has a maximum wavelength sensitivity of 207070.71 nm/RIU and a maximum amplitude sensitivity of 662.80 RIU1. The newly introduced sensor can detect the refractive index (RI) of various analytes across a broad spectrum, ranging from 1.28 to 1.41. This extensive detection range allows the sensor to precisely measure sucrose concentrations up to 40%. This broad range enables the analysis of various analytes like sucrose, viruses, cancer cells, proteins, and numerous others.

在这项研究中,我们提出了一种使用光子晶体光纤(PCF)的非对称矩形开槽生物传感器,它受表面等离子体共振(SPR)的影响。该传感器只使用了七个气孔,确保了更好的制造可行性,其特性是通过基于有限元法(FEM)的数值分析确定的。为了简化制造工艺并确保化学稳定性,在结构的周边采用了化学不渗透的金(Au)条作为等离子材料。在有效的结构参数下,该传感器的最大振幅灵敏度为 663.13 RIU-1,最大波长灵敏度为 204,000 nm/RIU,Y 极化模式的最大波长分辨率为 4.90 × 10-7 RIU。它的线性度也高达 0.9849。在检测蔗糖含量时,它的最大波长灵敏度为 207070.71 nm/RIU,最大振幅灵敏度为 662.80 RIU-1。新推出的传感器可在 1.28 至 1.41 的宽光谱范围内检测各种分析物的折射率 (RI)。这一广泛的检测范围使传感器能够精确测量高达 40% 的蔗糖浓度。这一宽广的检测范围可用于分析蔗糖、病毒、癌细胞、蛋白质等各种分析物。
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引用次数: 0
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