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Unlocking plant defense: Exploring the nexus of biochar and Ca2+ signaling 开启植物防御:探索生物炭与 Ca2+ 信号的关系
IF 6.8 Q1 PLANT SCIENCES Pub Date : 2024-08-30 DOI: 10.1016/j.stress.2024.100584
Rubab Sarfraz , S.V.G.N. Priyadarshani , Ali Fakhar , Muhammad Israr Khan , Zohaib Ul Hassan , Pil Joo Kim , Gil Won Kim

The interaction between biochar application and calcium ions (Ca2+) in plants, in terms of activating plant defense mechanism would be useful to improve plant resilience and sustainable agriculture. This review aims to highlight the possible connection between biochar-induced changes in soil physicochemical properties, microbial interactions, and Ca2+ dynamics, ultimately leading to promote the plant defense mechanisms. We are also interested to discuss the role of Ca2+ signaling in coordinating plant responses to various biotic and abiotic stresses such as pathogen and insects attacks, cold or heat stress and drought stress as well as how Ca2+ fluxes, calcium-binding proteins, and ion channels are influenced by biochar application in the soil environment. Furthermore, we examine the impact of biochar on plant Ca2+ signaling pathways and how it can prime defense genes and strengthen call wall barriers to improve plant immunity. Despite significant progress, there is a need for interdisciplinary collaboration to fully sort out the mechanism of Ca2+ signaling in plants and induction of Ca2+ ions by biochar induction in soil environment. Advanced imaging techniques, proteomics and omics approaches could be helpful to unlock the complex interaction between biochar application and Ca2+ signaling. Overall, this review contributes substantially to the literature by describing the relationship between biochar and Ca2+ signaling and providing insights into novel approaches for enhancing plant defense mechanisms and development of sustainable agricultural solutions.

施用生物炭与植物体内钙离子(Ca2+)之间的相互作用可激活植物防御机制,这对提高植物的抗逆性和可持续农业非常有用。本综述旨在强调生物炭诱导的土壤理化性质变化、微生物相互作用和 Ca2+ 动态之间可能存在的联系,最终导致促进植物防御机制。我们还有兴趣讨论 Ca2+ 信号在协调植物对各种生物和非生物胁迫(如病原体和昆虫侵袭、冷热胁迫和干旱胁迫)的反应中的作用,以及 Ca2+ 通量、钙结合蛋白和离子通道如何受到土壤环境中生物炭应用的影响。此外,我们还研究了生物炭对植物 Ca2+ 信号通路的影响,以及生物炭如何激发防御基因和加强胼胝壁屏障以提高植物免疫力。尽管取得了重大进展,但仍需要跨学科合作,以全面理清植物中 Ca2+ 信号传导机制以及土壤环境中生物炭诱导 Ca2+ 离子的机制。先进的成像技术、蛋白质组学和全息方法有助于揭示生物炭的应用与 Ca2+ 信号传导之间复杂的相互作用。总之,这篇综述描述了生物炭与 Ca2+ 信号传导之间的关系,为加强植物防御机制和开发可持续农业解决方案的新方法提供了见解,从而为相关文献做出了重大贡献。
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引用次数: 0
Nitrogen deficiency differentially affects lignin biosynthesis genes and flavanols accumulation in tolerant and susceptible tea genotypes (Camellia sinensis (L.) Kuntze) 缺氮对耐受和易感茶叶基因型(Camellia sinensis (L.) Kuntze)木质素生物合成基因和黄烷醇积累的不同影响
IF 6.8 Q1 PLANT SCIENCES Pub Date : 2024-08-30 DOI: 10.1016/j.stress.2024.100581
Lidiia Samarina , Lyudmila Malyukova , Songbo Wang , Yang Li , Alexey Doroshkov , Aleksandr Bobrovskikh , Ruset Shkhalakhova , Natalia Koninskaya , Alexandra Matskiv , Andrey Velikiy , Alexey Ryndin , Elena Khlestkina

The mechanisms of the nitrogen deficiency (ND) response are complex and not sufficiently studied in evergreen tree crops. The aim of this study was to investigate the nitrogen deficiency response in two contrasting tea genotypes to reveal molecular crosstalk between tea quality and tolerance to ND. The transcriptional response to two- and four-month nitrogen deficiency was analyzed in tolerant (cv. Karatum) and susceptible (cv. Kolkhida) tea genotypes. Both GO and KEGG analyses indicated that phenylpropanoid pathway was significantly enriched under nitrogen deficiency in both cultivars. Most of the transcription factor DEGs were related to ABA-mediated stress responses; the following transcription factors were upregulated in both genotypes and in both stress periods: TEAK026346 (bZip23), TEAK015869 (RADIALIS-like 3 isoform X1), TEAK022547 (bHLH78) and one was downregulated TEAK030189 (MYB family transcription factor EFM like) indicating their important role for regulation of nitrogen deficiency response. Gene network of phenylpropanoid pathway DEGs indicated the abandoned edges in lignin biosynthesis DEGs. Generally, the results suggest greater stability of the cell wall metabolism and secondary metabolism in tolerant genotype under long term nitrogen deficiency. The revealed lignin biosynthesis genes can be new candidates for molecular breeding to develop tolerant tea genotypes.

常绿乔木作物的缺氮(ND)反应机制十分复杂,研究也不够充分。本研究旨在调查两种不同茶叶基因型的缺氮反应,以揭示茶叶品质和对缺氮耐受性之间的分子串联。研究分析了茶叶耐受性基因型(cv. Karatum)和易感性基因型(cv. Kolkhida)对两个月和四个月氮缺乏的转录响应。GO和KEGG分析表明,在缺氮条件下,两种茶树的苯丙酮通路都显著富集。大多数转录因子 DEGs 与 ABA 介导的胁迫响应有关;以下转录因子在两种基因型和两个胁迫期均出现上调:TEAK026346(bZip23)、TEAK015869(RADIALIS-like 3 isoform X1)、TEAK022547(bHLH78)和一个下调的转录因子 TEAK030189(MYB 家族转录因子 EFM like)表明它们在调控缺氮响应中起着重要作用。苯丙酮途径 DEGs 的基因网络表明,木质素生物合成 DEGs 的边缘被放弃。总体而言,研究结果表明,在长期缺氮条件下,耐氮基因型的细胞壁代谢和次生代谢更加稳定。所揭示的木质素生物合成基因可作为分子育种的新候选基因,以培育耐缺氮的茶叶基因型。
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引用次数: 0
Effect of arbuscular mycorrhizal symbiosis on grapevine response to Neofusicoccum parvum, a major trunk disease fungus 树根菌根共生对葡萄树对一种主要树干病害真菌 Neofusicoccum parvum 的反应的影响
IF 6.8 Q1 PLANT SCIENCES Pub Date : 2024-08-29 DOI: 10.1016/j.stress.2024.100582
Lorène Belval , Lucie Roth , Isabelle R. Martin , Hélène Laloue , Laurence Deglene-Benbrahim , Laure Valat , Mary-Lorène Goddard , Julie Chong

Grapevine is an economically-important culture worldwide but is currently the target of decline, especially caused by grapevine trunk diseases (GTD). One of the major grapevine trunk disease is Botryosphaeria dieback, which is associated with Botryosphaeriaceae fungi. Among the different methods that could contribute to increase grapevine fitness under stresses, viticulture could take advantage of symbiosis with arbuscular mycorrhizal fungi. Within this context, we investigated the effect of V. vinifera cv. Gewurztraminer colonization with the arbuscular mycorrhizal fungus Rhizophagus irregularis on plant tolerance to wood inoculation with Neofusicoccum parvum Bt67, one of the most aggressive fungus associated with Botryosphaeria dieback. We showed that grapevine mycorrhization resulted in a small but significant reduction of wood necrosis size and less intense necrosis symptoms on the leaves. We further characterized the response of grapevine leaves and roots to both arbuscular mycorrhizal fungus (AMF) symbiosis and GTD fungus inoculation, especially the interaction between these two conditions, with a non-targeted metabolomic approach. In the roots, both mycorrhization and N. parvum infection triggered metabolite reprogramming, especially sugars and stilbenes, which were downregulated by both AMF symbiosis and pathogen infection. Furthermore, N. parvum infection triggered a significant decrease in fatty acids and oxylipins in leaves of non-mycorrhized plants, whereas contents were maintained or increased in Rhizophagus irregularis-colonized plants. In conclusion, AMF symbiosis may be an interesting tool to improve health of young grapevines and help sustaining infection by trunk disease fungi, by harnessing lipid metabolism.

葡萄是世界上一种具有重要经济价值的栽培植物,但目前正处于衰退期,尤其是由葡萄树干病害(GTD)引起的衰退。其中一种主要的葡萄树干病害是与 Botryosphaeriaceae 真菌有关的 Botryosphaeria 枯梢病。在各种有助于提高葡萄树抗逆性的方法中,葡萄栽培可以利用与丛枝菌根真菌共生的优势。在这一背景下,我们研究了葡萄品种 Gewurztraminer 与丛生菌根真菌 Rhizophagus irregularis 定殖对植物对木材接种 Neofusicoccum parvum Bt67 的耐受性的影响,Neofusicoccum parvum Bt67 是与 Botryosphaeria 枯梢病相关的最具侵袭性的真菌之一。我们的研究表明,葡萄菌根化能使木质部坏死面积缩小,叶片上的坏死症状减轻,但幅度很小。我们采用非靶向代谢组学方法,进一步描述了葡萄叶片和根系对丛枝菌根真菌(AMF)共生和GTD真菌接种的反应,尤其是这两种条件之间的相互作用。在根部,菌根化和N. parvum感染都会引发代谢物重编程,尤其是糖和芪,AMF共生和病原体感染都会下调这两种代谢物。此外,N. parvum 感染会导致非菌根植物叶片中的脂肪酸和氧脂蛋白显著减少,而在根瘤菌不规则定植的植物中,脂肪酸和氧脂蛋白的含量保持不变或有所增加。总之,AMF共生可能是一种有趣的工具,可以通过利用脂质代谢改善葡萄幼苗的健康,并帮助维持树干病害真菌的感染。
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引用次数: 0
Rapid and high-throughput identification of thermal-responsive genes based on cDNA-library in upland cotton 基于 cDNA 文库的陆地棉热响应基因的快速和高通量鉴定
IF 6.8 Q1 PLANT SCIENCES Pub Date : 2024-08-28 DOI: 10.1016/j.stress.2024.100580
Biyu Xu , Tao Jiang , Yan Wang , Jiani Chen , Wangshu Liu , Ying He , Zhanfeng Si , Yan Hu

Severe high temperature (HT) climate significantly impacts cotton quality and yield. Consequently, it is essential to mine thermal-responsive genes and explore the underlying mechanisms of HT response in cotton. In this study, we employed a high-throughput cDNA-library method in conjunction with the ALRS system to screen thermotolerant genes in Upland cotton. As a result, a total of 16,120, 13,216 and 172 effective survival genes were filtered after HT stress exposure (42 °C, 220 rpm) for 48 h, 60 h and 72 h, respectively. Functional annotation and enrichment analysis revealed that 170 common genes were involved in regulatory processes associated with HT stress, and the relevant transcriptome data indicated that the majority of these genes responded to temperature fluctuations. Twenty-one genes were randomly selected for verification, and it was found that these genes could enhance yeast resistance to HT stress. Additionally, we selected mutants of homologous Arabidopsis genes for four candidate genes to validate plant thermotolerance during flowering; the thermotolerances of SALK_201915 and SALK_120540.1 were significantly worse. The results demonstrate that numerous candidate genes identified from the cDNA-library contribute to the highly complex molecular network that governs the response and resistance to HT stress in Upland cotton. The high-throughput heat-screening method utilized in this study was optimized for mining thermotolerant genes including improvement in yeast library construction, screening system, gradient reverse pressure, and sequencing library construction. We hope that this new method can be applied in future studies on stress in cotton and other species.

严酷的高温(HT)气候严重影响棉花的品质和产量。因此,挖掘耐高温基因并探索棉花耐高温的内在机制至关重要。在本研究中,我们采用高通量 cDNA 文库方法并结合 ALRS 系统筛选陆地棉的耐热基因。结果,在高温胁迫(42 °C、220 转/分)48 小时、60 小时和 72 小时后,分别筛选出 16120 个、13216 个和 172 个有效存活基因。功能注释和富集分析表明,170个常见基因参与了与高温胁迫相关的调控过程,相关的转录组数据表明,这些基因大多对温度波动做出了响应。我们随机选择了 21 个基因进行验证,发现这些基因可以增强酵母对 HT 胁迫的抵抗力。此外,我们还为四个候选基因选择了拟南芥同源基因的突变体,以验证植物在开花期的耐热性;SALK_201915和SALK_120540.1的耐热性明显更差。结果表明,从 cDNA 库中发现的众多候选基因构成了一个高度复杂的分子网络,支配着陆地棉对高温胁迫的响应和抗性。本研究采用的高通量热筛选方法经过优化,可用于挖掘耐热基因,包括改进酵母文库构建、筛选系统、梯度反向压力和测序文库构建。我们希望这种新方法能在今后的棉花及其他物种胁迫研究中得到应用。
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引用次数: 0
Phytoremediation: Harnessing plant power and innovative technologies for effective soil remediation 植物修复:利用植物力量和创新技术有效修复土壤
IF 6.8 Q1 PLANT SCIENCES Pub Date : 2024-08-27 DOI: 10.1016/j.stress.2024.100578
Malika Oubohssaine, Ikram Dahmani

Toxic pollutants released from various human activities persistently pose significant threats to living organisms, affecting soil fertility, and impacting human health. Among the various remediation approaches, phytoremediation has gained popularity due to its cost-effectiveness and environmentally friendly characteristics. This method involves utilizing plant species to restore polluted soils, emphasizing the intrinsic abilities of plants to remediate contaminated environments. There are various phytoremediation approaches and combinations that have been developed, ranging from phytoextraction to rhizofiltration, each tailored to specific contaminants and environmental conditions. While acknowledging the slow and time-consuming nature of the phytoremediation process and its potential impact on plant growth and development, this review emphasizes the increasing significance of this eco-friendly approach. Moreover, the exploration suggests that leveraging plant-microbe interactions could enhance the efficiency of remediating contaminated areas. Furthermore, understanding the microbial mechanisms involved in phytoremediation is crucial for optimizing remediation outcomes. Microbes play a pivotal role in enhancing plant tolerance to pollutants, facilitating pollutant degradation, and promoting plant growth in contaminated environments. Harnessing the power of microbial communities through bioaugmentation or stimulating indigenous microbial populations can significantly improve phytoremediation efficiency. Emerging omics technologies and the application of CRISPR/Cas9 technology in phytoremediation offer promising avenues for advancing soil remediation efforts. Omics approaches, including genomics, transcriptomics, proteomics, and metabolomics, provide insights into the genetic and molecular mechanisms underlying plant responses to pollutants and can aid in identifying key genes or pathways for enhancing phytoremediation efficiency. Meanwhile, CRISPR/Cas9 technology presents an innovative solution for targeted genome editing in plants, enabling precise modification of genes involved in pollutant uptake, tolerance, and detoxification. By engineering plants with enhanced capabilities for metal sequestration or pollutant degradation, CRISPR/Cas9 holds tremendous potential for accelerating the remediation of contaminated soils. This comprehensive review serves as a valuable resource for environmental practitioners and scientists, providing insights into both traditional and innovative technologies that have the potential to transform soil remediation practices, ultimately contributing to a cleaner and healthier environment.

人类各种活动释放的有毒污染物持续对生物构成重大威胁,影响土壤肥力,并影响人类健康。在各种修复方法中,植物修复法因其成本效益高和环境友好的特点而广受欢迎。这种方法是利用植物物种修复受污染的土壤,强调植物修复受污染环境的内在能力。目前已开发出多种植物修复方法和组合,从植物萃取到根茎过滤,每种方法都针对特定的污染物和环境条件。本综述承认植物修复过程缓慢且耗时,对植物的生长和发育有潜在影响,但同时强调这种生态友好型方法的重要性与日俱增。此外,研究还表明,利用植物与微生物之间的相互作用可以提高受污染地区的修复效率。此外,了解植物修复所涉及的微生物机制对于优化修复效果至关重要。微生物在提高植物对污染物的耐受性、促进污染物降解以及促进植物在受污染环境中的生长方面发挥着举足轻重的作用。通过生物增殖或刺激本地微生物种群来利用微生物群落的力量,可以显著提高植物修复效率。新兴的全局组学技术和 CRISPR/Cas9 技术在植物修复中的应用为推进土壤修复工作提供了前景广阔的途径。包括基因组学、转录物组学、蛋白质组学和代谢组学在内的全量组学方法可以帮助人们深入了解植物对污染物反应的遗传和分子机制,并有助于确定提高植物修复效率的关键基因或途径。与此同时,CRISPR/Cas9 技术为植物基因组的定向编辑提供了一种创新的解决方案,可对涉及污染物吸收、耐受和解毒的基因进行精确修改。通过对植物进行工程改造,增强其金属吸收或污染物降解能力,CRISPR/Cas9 在加速污染土壤修复方面具有巨大潜力。本综述为环境从业人员和科学家提供了宝贵的资源,让他们深入了解有可能改变土壤修复方法的传统技术和创新技术,最终为创造更清洁、更健康的环境做出贡献。
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引用次数: 0
The ecological hazards of profenofos revealed by soil beneficial-bacteria, plant seedlings, and plasmid nicking assays: A short-term toxicity investigation 通过土壤有益菌、植物幼苗和质粒挑刺试验揭示丙溴磷的生态危害:短期毒性调查
IF 6.8 Q1 PLANT SCIENCES Pub Date : 2024-08-26 DOI: 10.1016/j.stress.2024.100577
Mohammad Shahid, Udai B. Singh

Excessive and indiscriminate use of pesticides may adversely affect the growth and activity of both crop plants and soil microbial populations. The reported study was conducted to evaluate the toxicity of profenofos (PF; an organophosphate insecticide) using bacterial (Pseudomonas fluorescens PSB-3 and Enterobacter cloacae ZSB-8) and plant (Coriandrum sativum and Lactuca sativa L.) bioassays. PF was applied at rates of (0–100 µg mL−1) in vitro. Both bacterial strains were sensitive to PF but showed variable tolerance. Following PF exposure, cellular growth, morphology, survival, and inner membrane permeability of bacterial strains were significantly (p < 0.05) altered. Decreased population size coincided with decline in cellular respiration. The 100 µgmL−1 PF dosage imparted maximum impact on ZSB-8, inhibiting populations by 87%. PF also interfered with bacterial surface adherence (i.e., biofilm formation) in a concentration-dependent manner. Alterations in bacterial biomarker enzymatic activity and oxidative stress were also noted. PGP traits of bacterial strains were negatively and significantly (p ≤ 0.05) affected by insecticide. Under PF stress, reduction in indole-3-acetic and siderophore production followed the order: ZSB-8 > PSB-3. PF-induced phytotoxicity was confirmed via reduction in germination, seedling parameters, survival, tolerance, and vigor indices in both plant species. Additionally, PF caused distortion in morphology of root tips and root surfaces. Under CLSM, PF-exposed C. sativum and L. sativa roots exhibited increased oxidative stress. Cellular death in insecticide-treated roots was observed following staining with Evans blue dye. Insecticide concentration-dependent increase in stress markers (proline and MDA content), and antioxidant enzymatic activities in plant seedlings were observed. A dose-dependent conversion of super-coiled form of DNA to open circular in pBR-322 plasmid revealed the genotoxic potential of PF. These findings provide an understanding of toxic effects of profenofos on beneficial microbes and leafy edible vegetables, including their morphological, and cellular effects. Indeed, insecticidal applications deserve special attention due to their potential environmental hazards.

过度和滥用杀虫剂可能会对作物和土壤微生物种群的生长和活性产生不利影响。报告中的研究采用细菌(荧光假单胞菌 PSB-3 和肠杆菌 ZSB-8)和植物(芫荽和莴苣)生物测定法评估了丙溴磷(PF,一种有机磷杀虫剂)的毒性。体外施用 PF 的比率为(0-100 µg mL-1)。两种细菌菌株对 PF 都很敏感,但耐受性各不相同。暴露于 PF 后,细菌菌株的细胞生长、形态、存活率和内膜渗透性都发生了显著变化(p < 0.05)。菌群数量的减少与细胞呼吸作用的下降同时发生。100 µgmL-1 PF 剂量对 ZSB-8 的影响最大,抑制了 87% 的菌群。PF 还以浓度依赖的方式干扰了细菌的表面粘附(即生物膜的形成)。细菌生物标志物酶活性和氧化应激也发生了变化。细菌菌株的 PGP 特性受到杀虫剂的显著负面影响(p ≤ 0.05)。在 PF 胁迫下,吲哚-3-乙酸和嗜苷酸盐的产量依次减少:ZSB-8 > PSB-3。两种植物的发芽率、幼苗参数、存活率、耐受性和活力指数的降低证实了 PF 诱导的植物毒性。此外,PF 还导致根尖和根表面形态扭曲。在 CLSM 条件下,暴露于 PF 的 C. sativum 和 L. sativa 根系表现出更强的氧化应激。用伊文思蓝染料染色后,可以观察到杀虫剂处理过的根细胞死亡。在植物幼苗中,观察到应激标记物(脯氨酸和 MDA 含量)和抗氧化酶活性的增加与杀虫剂浓度有关。在 pBR-322 质粒中,超卷曲 DNA 转变为开放环状 DNA 的剂量依赖性揭示了 PF 的潜在遗传毒性。这些发现让人们了解了丙溴磷对有益微生物和叶菜类蔬菜的毒性作用,包括其形态和细胞效应。事实上,杀虫应用因其潜在的环境危害而值得特别关注。
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引用次数: 0
Contrasted NCED gene expression across conifers with rising and peaking abscisic acid responses to drought 针叶树对干旱的赤霉酸反应上升和达到顶峰时,NCED 基因表达的对比情况
IF 6.8 Q1 PLANT SCIENCES Pub Date : 2024-08-25 DOI: 10.1016/j.stress.2024.100574
Gabriele Rizzuto , Dapeng Wang , Jinhui Chen , Tin Hang Hung , Anne Charlott Fitzky , Emily Flashman , John J. MacKay

Conifer trees have diverse strategies to cope with drought. They accumulate the plant hormone abscisic acid (ABA) following a range of profiles from constantly rising to peaking and falling (R- and P-type) with direct effect on foliar transpiration. The molecular basis of this adaptive diversification among species is largely unknown. Here, we analysed the sequences of candidate ABA biosynthesis and catabolism genes and monitored their expression in response to intensifying drought. We studied young trees from Cupressaceae, Pinaceae, and Taxaceae under controlled drought conditions and compared changes in water status, ABA profiles and gene-specific transcript levels. Our data indicate that R-type and P-type ABA profiles may be controlled by divergent expression of genes involved in the biosynthetic and catabolic pathways of ABA, respectively, and emphasize a key role of nine-cis-epoxycarotenoid dioxygenases (NCED) genes. Our results open the doors to understanding the molecular basis of contrasted drought response strategies across conifer taxa, which we expect will help foresters grow more drought-resilient trees.

针叶树应对干旱的策略多种多样。它们积累的植物激素脱落酸(ABA)具有从持续上升到峰值和下降(R 型和 P 型)的一系列特征,对叶面蒸腾有直接影响。物种间这种适应性多样化的分子基础在很大程度上还不为人所知。在此,我们分析了候选 ABA 生物合成和分解基因的序列,并监测了这些基因在干旱加剧时的表达情况。我们在受控干旱条件下研究了濯缨科、松科和紫杉科的幼树,并比较了水分状态、ABA概况和特异基因转录本水平的变化。我们的数据表明,R 型和 P 型 ABA 图谱可能分别由参与 ABA 生物合成和分解途径的不同基因的表达所控制,并强调了九顺式环氧类胡萝卜素二氧酶(NCED)基因的关键作用。我们的研究结果为了解针叶树类群不同干旱响应策略的分子基础打开了大门,我们希望这将有助于林业工作者培育出抗旱能力更强的树木。
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引用次数: 0
Identification of reference genes via real-time quantitative PCR for investigation of the transcriptomic basis of the squalene biosynthesis in different tissues on olives under drought stress 通过实时定量 PCR 鉴定参考基因,研究干旱胁迫下橄榄不同组织角鲨烯生物合成的转录组学基础
IF 6.8 Q1 PLANT SCIENCES Pub Date : 2024-08-25 DOI: 10.1016/j.stress.2024.100575
Haiyang Chi , Shasha Bai , Chenxiao Chen , Yuying Bao , Xiaoxin Qu , Shitao Sun , Jiangpeng Pan , Xiushi Yang , Chunsheng Hou , Yanchun Deng

Squalene plays a crucial role in plant growth, development, and stress tolerance. To select the best reference genes (RGs) for expression profile analysis of genes involved in squalene biosynthesis in olives under stress tolerance, the expression stability of 22 candidate RGs across four tissues (root, stem, leaf, and fruit) and five representative cultivars under drought stress was assessed using six methods. Our study showed that, ubiquitin-conjugating enzyme1 (UBC1) and 60S ribosomal protein L18-2-like (60S) were the most stable RGs across five different cultivars and various tissues. Additionally, elongation factor 1-alpha-like (EF1-α2) and UBC1 were the most stable RG in olives under drought stress. UBC1 was the appropriate RG for further study, qPCR analysis showed that five certain genes involved in the squalene biosynthesis exhibited significant differential expression under varying conditions. Specially, the expression level of squalene synthase (SQS) in the leaves was highest, and HPLC analysis showed that squalene content was the highest in leaves. Likewise, the expression levels of SQS and farnesyl diphosphate synthase (FPPS) in the leaves of the cultivar Arbosana and Chelmsford Lal were significantly higher than those of the other cultivars, respectively, and HPLC analysis also showed that squalene content was highest in the two cultivars. Interestingly, the amount of squalene increased dramatically in olive under drought stress, as lupeol synthase (LUPS) was significantly up-regulated. To date, this study firstly provided the comprehensive analysis of RGs related to squalene biosynthesis in various cultivars and tissues of olives under drought stress.

角鲨烯在植物的生长、发育和抗逆性中起着至关重要的作用。为了选择最佳参考基因(RGs)来分析橄榄在胁迫耐受下参与角鲨烯生物合成的基因表达谱,我们采用六种方法评估了 22 个候选 RGs 在干旱胁迫下在四个组织(根、茎、叶和果实)和五个代表性栽培品种中的表达稳定性。研究结果表明,泛素结合酶1(UBC1)和60S核糖体蛋白L18-2-like(60S)是五个不同栽培品种和不同组织中最稳定的RGs。此外,在干旱胁迫下,伸长因子 1-α-样(EF1-α2)和 UBC1 是橄榄中最稳定的 RG。qPCR 分析表明,参与角鲨烯生物合成的五个基因在不同条件下表现出显著的表达差异。其中,角鲨烯合成酶(SQS)在叶片中的表达水平最高,HPLC 分析表明叶片中角鲨烯含量最高。同样,SQS 和法尼酰二磷酸合成酶(FPPS)在 Arbosana 和 Chelmsford Lal 两个品种叶片中的表达水平也分别显著高于其他品种,高效液相色谱分析也显示这两个品种的角鲨烯含量最高。有趣的是,由于羽扇豆醇合成酶(LUPS)明显上调,干旱胁迫下橄榄树的角鲨烯含量大幅增加。迄今为止,该研究首次全面分析了干旱胁迫下橄榄不同栽培品种和组织中与角鲨烯生物合成相关的 RGs。
{"title":"Identification of reference genes via real-time quantitative PCR for investigation of the transcriptomic basis of the squalene biosynthesis in different tissues on olives under drought stress","authors":"Haiyang Chi ,&nbsp;Shasha Bai ,&nbsp;Chenxiao Chen ,&nbsp;Yuying Bao ,&nbsp;Xiaoxin Qu ,&nbsp;Shitao Sun ,&nbsp;Jiangpeng Pan ,&nbsp;Xiushi Yang ,&nbsp;Chunsheng Hou ,&nbsp;Yanchun Deng","doi":"10.1016/j.stress.2024.100575","DOIUrl":"10.1016/j.stress.2024.100575","url":null,"abstract":"<div><p>Squalene plays a crucial role in plant growth, development, and stress tolerance. To select the best reference genes (RGs) for expression profile analysis of genes involved in squalene biosynthesis in olives under stress tolerance, the expression stability of 22 candidate RGs across four tissues (root, stem, leaf, and fruit) and five representative cultivars under drought stress was assessed using six methods. Our study showed that, <em>ubiquitin-conjugating enzyme1</em> (<em>UBC1</em>) and <em>60S ribosomal protein L18-2-like</em> (<em>60S</em>) were the most stable RGs across five different cultivars and various tissues. Additionally, <em>elongation factor 1-alpha-like</em> (<em>EF1-α2)</em> and <em>UBC1</em> were the most stable RG in olives under drought stress. <em>UBC1</em> was the appropriate RG for further study, qPCR analysis showed that five certain genes involved in the squalene biosynthesis exhibited significant differential expression under varying conditions. Specially, the expression level of squalene synthase (SQS) in the leaves was highest, and HPLC analysis showed that squalene content was the highest in leaves. Likewise, the expression levels of <em>SQS</em> and <em>farnesyl diphosphate synthase</em> (<em>FPPS</em>) in the leaves of the cultivar Arbosana and Chelmsford Lal were significantly higher than those of the other cultivars, respectively, and HPLC analysis also showed that squalene content was highest in the two cultivars. Interestingly, the amount of squalene increased dramatically in olive under drought stress, as <em>lupeol synthase</em> (<em>LUPS</em>) was significantly up-regulated. To date, this study firstly provided the comprehensive analysis of RGs related to squalene biosynthesis in various cultivars and tissues of olives under drought stress.</p></div>","PeriodicalId":34736,"journal":{"name":"Plant Stress","volume":"14 ","pages":"Article 100575"},"PeriodicalIF":6.8,"publicationDate":"2024-08-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2667064X24002288/pdfft?md5=f97e24036352abc920e56619907aeff6&pid=1-s2.0-S2667064X24002288-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142094869","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
In-depth exploration of nanoparticles for enhanced nutrient use efficiency and abiotic stresses management: Present insights and future horizons 深入探讨纳米颗粒在提高养分利用效率和管理非生物胁迫方面的作用:当前见解与未来展望
IF 6.8 Q1 PLANT SCIENCES Pub Date : 2024-08-25 DOI: 10.1016/j.stress.2024.100576
Abhishek Singh , Aishwarya Sharma , Omkar Singh , Vishnu D. Rajput , Hasmik Movsesyan , Tatiana Minkina , Athanasios Alexiou , Marios Papadakis , Rupesh Kumar Singh , Sakshi Singh , João Ricardo Sousa , Hassan Ragab El-Ramady , Faisal Zulfiqar , Rahul Kumar , Abdullah Ahmed Al-Ghamdi , Karen Ghazaryan

Nanotechnology is an innovative method of elevating agricultural output without sacrificing quality due to nanoparticles (NPs) unique characteristics and numerous potential uses. It is also nature-friendly, advantageous to living organisms, and cost-effective. Sustainable agricultural practices are gaining attention on NPs and nanofertilizers (NFs) as practical substitutes for traditional fertilizers and pesticides that nanotechnology could surpass some of the issues with traditional farming methods. There should be an emphasis on cutting-edge studies of NPs applications in agriculture. This article presents a positive perspective on the mechanisms leading to the formation of NPs and their application as NFs for managing nutrients in agriculture. We also share up-to-date findings on NPs interactions with plants, the fate of NPs and potential risks associated with them in plants. The as well as on the role of NPs nanomaterials in decreasing abiotic and heavy metal toxicity stress. NFs help reduce the environmental damage caused by traditional, inorganic fertilizers. Due to their enhanced responsiveness and ability to pierce the epidermis, NFs can decrease nutrient surplus while increasing nutrient usage efficiency. It was also established that NPs are essential for protecting against abiotic stress. However, some studies have shown that NPs are harmful to higher plants because the NPs they are deposited upon the surface of cells or in the cell organelles, leading to oxidative stress symptoms. In this review article, we explore the utilization of NPs for nutrient and abiotic stress management for crop production and protection during the climate change era.

由于纳米粒子(NPs)的独特特性和众多潜在用途,纳米技术是在不牺牲质量的前提下提高农业产量的一种创新方法。此外,纳米技术还具有自然友好、对生物有利和成本效益高等特点。纳米粒子和纳米肥料(NFs)作为传统肥料和杀虫剂的实用替代品,纳米技术可以解决传统耕作方法的一些问题,因此可持续农业实践正日益受到关注。应重视纳米粒子在农业中应用的前沿研究。本文从积极的角度阐述了 NPs 的形成机制及其作为 NFs 在农业养分管理中的应用。我们还分享了有关 NPs 与植物的相互作用、NPs 的归宿以及与植物相关的潜在风险的最新研究成果。此外,我们还介绍了 NPs 纳米材料在降低非生物和重金属毒性压力方面的作用。NFs 有助于减少传统无机肥料对环境造成的破坏。由于其反应能力和穿透表皮的能力更强,NFs 可以减少养分过剩,同时提高养分利用效率。研究还发现,氮磷钾对抵御非生物胁迫至关重要。然而,一些研究表明,NPs 对高等植物有害,因为它们沉积在细胞表面或细胞器中,导致氧化应激症状。在这篇综述文章中,我们将探讨在气候变化时代如何利用氮磷钾进行养分和非生物胁迫管理,以促进作物生产和保护作物。
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引用次数: 0
Discovery of functional PRRs for the fungal elicitor Xyn11/eix in Prunus fruit trees 发现梅果树中真菌诱导剂 Xyn11/eix 的功能性 PRRs
IF 6.8 Q1 PLANT SCIENCES Pub Date : 2024-08-22 DOI: 10.1016/j.stress.2024.100567
Andree Alvarez , Uri Aceituno-Valenzuela , Meirav Leibman-Markus , Daniela Muñoz , Carlos Rubilar , Franco Figueroa , Manuel Pinto , Mauricio Latorre , Claudia Stange , Adi Avni , Maya Bar , Lorena Pizarro

Pattern-triggered immunity (PTI) is a critical defense mechanism employed by plants against pathogen attacks. This study explores the role of PTI induced by the Xyn11/eix fungal elicitor in two commercially valuable Rosaceae species, Prunus persica (peach) and Prunus avium (sweet cherry). Our findings demonstrate that Xyn11/eix triggers two specific defense responses: the increase in ethylene production and the induction of cell death. Furthermore, Xyn11/eix-mediated PTI significantly reduces the susceptibility to Botrytis cinerea infection in both species. The study reveals changes in gene expression patterns after Xyn11/eix treatment. Notably, ACO1 and SARDEF1 genes, involved in ethylene and salycilic acid biosynthesis, respectively, are upregulated in P. persica, but not in P. avium at the time point analyzed. This result suggests a potential role for the ethylene and salicylic acid signaling in Xyn11/mix-mediated PTI in P. persica. Additionally, the research identified functional orthologues of LeEIX2, the receptor for Xyn11/eix in Solanum lycopersicum, within both Prunes genomes. Altogether, these results suggest a remarkable functional convergence between Rosaceae and Solanaceae plants in the Xyn11/eix mediated defense responses although not at the transcriptional level, and opens new avenues for developing novel disease control strategies for stone fruits.

模式触发免疫(PTI)是植物抵御病原体侵袭的一种重要防御机制。本研究探讨了 Xyn11/eix 真菌诱导剂在两种具有商业价值的蔷薇科植物--桃(Prunus persica)和甜樱桃(Prunus avium)--中诱导 PTI 的作用。我们的研究结果表明,Xyn11/eix 触发了两种特定的防御反应:增加乙烯产量和诱导细胞死亡。此外,Xyn11/eix 介导的 PTI 能显著降低这两种植物对灰霉病菌感染的易感性。研究揭示了 Xyn11/eix 处理后基因表达模式的变化。值得注意的是,在分析的时间点上,分别参与乙烯和水杨酸生物合成的 ACO1 和 SARDEF1 基因在 P. persica 中上调,而在 P. avium 中没有上调。这一结果表明,乙烯和水杨酸信号在 Xyn11/mix 介导的持久性有机污染物影响中可能发挥作用。此外,研究还在两种梅花基因组中发现了 LeEIX2 的功能直向同源物,LeEIX2 是茄果类植物中 Xyn11/eix 的受体。总之,这些结果表明,蔷薇科植物和茄科植物在 Xyn11/eix 介导的防御反应(尽管不是在转录水平上)方面存在显著的功能趋同,并为开发核果类水果的新型病害控制策略开辟了新途径。
{"title":"Discovery of functional PRRs for the fungal elicitor Xyn11/eix in Prunus fruit trees","authors":"Andree Alvarez ,&nbsp;Uri Aceituno-Valenzuela ,&nbsp;Meirav Leibman-Markus ,&nbsp;Daniela Muñoz ,&nbsp;Carlos Rubilar ,&nbsp;Franco Figueroa ,&nbsp;Manuel Pinto ,&nbsp;Mauricio Latorre ,&nbsp;Claudia Stange ,&nbsp;Adi Avni ,&nbsp;Maya Bar ,&nbsp;Lorena Pizarro","doi":"10.1016/j.stress.2024.100567","DOIUrl":"10.1016/j.stress.2024.100567","url":null,"abstract":"<div><p>Pattern-triggered immunity (PTI) is a critical defense mechanism employed by plants against pathogen attacks. This study explores the role of PTI induced by the Xyn11/eix fungal elicitor in two commercially valuable Rosaceae species, <em>Prunus persica</em> (peach) and <em>Prunus avium</em> (sweet cherry). Our findings demonstrate that Xyn11/eix triggers two specific defense responses: the increase in ethylene production and the induction of cell death. Furthermore, Xyn11/eix-mediated PTI significantly reduces the susceptibility to <em>Botrytis cinerea</em> infection in both species. The study reveals changes in gene expression patterns after Xyn11/eix treatment. Notably, <em>ACO1</em> and <em>SARDEF1</em> genes, involved in ethylene and salycilic acid biosynthesis, respectively, are upregulated in <em>P. persica</em>, but not in <em>P. avium</em> at the time point analyzed. This result suggests a potential role for the ethylene and salicylic acid signaling in Xyn11/mix-mediated PTI in <em>P. persica</em>. Additionally, the research identified functional orthologues of LeEIX2, the receptor for Xyn11/eix in <em>Solanum lycopersicum</em>, within both Prunes genomes. Altogether, these results suggest a remarkable functional convergence between Rosaceae and Solanaceae plants in the Xyn11/eix mediated defense responses although not at the transcriptional level, and opens new avenues for developing novel disease control strategies for stone fruits.</p></div>","PeriodicalId":34736,"journal":{"name":"Plant Stress","volume":"14 ","pages":"Article 100567"},"PeriodicalIF":6.8,"publicationDate":"2024-08-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2667064X24002203/pdfft?md5=b08426f88c5225053f033595741ff19a&pid=1-s2.0-S2667064X24002203-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142129650","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Plant Stress
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