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Diminishing warming effects on plant phenology over time. 随着时间的推移,气候变暖对植物物候的影响逐渐减弱。
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-08-05 DOI: 10.1111/nph.20019
Chunyan Lu, Kees Jan van Groenigen, Mark A K Gillespie, Robert D Hollister, Eric Post, Elisabeth J Cooper, Jeffrey M Welker, Yixuan Huang, Xueting Min, Jianghui Chen, Ingibjörg Svala Jónsdóttir, Marguerite Mauritz, Nicoletta Cannone, Susan M Natali, Edward Schuur, Ulf Molau, Tao Yan, Hao Wang, Jin-Sheng He, Huiying Liu

Plant phenology, the timing of recurrent biological events, shows key and complex response to climate warming, with consequences for ecosystem functions and services. A key challenge for predicting plant phenology under future climates is to determine whether the phenological changes will persist with more intensive and long-term warming. Here, we conducted a meta-analysis of 103 experimental warming studies around the globe to investigate the responses of four phenophases - leaf-out, first flowering, last flowering, and leaf coloring. We showed that warming advanced leaf-out and flowering but delayed leaf coloring across herbaceous and woody plants. As the magnitude of warming increased, the response of most plant phenophases gradually leveled off for herbaceous plants, while phenology responded in proportion to warming in woody plants. We also found that the experimental effects of warming on plant phenology diminished over time across all phenophases. Specifically, the rate of changes in first flowering for herbaceous species, as well as leaf-out and leaf coloring for woody species, decreased as the experimental duration extended. Together, these results suggest that the real-world impact of global warming on plant phenology will diminish over time as temperatures continue to increase.

植物物候学是经常性生物事件发生的时间,它对气候变暖做出了关键而复杂的反应,对生态系统功能和服务产生了影响。预测未来气候下植物物候的一个关键挑战是确定物候变化是否会随着更密集、更长期的气候变暖而持续。在此,我们对全球 103 项气候变暖实验研究进行了荟萃分析,研究了植物出叶、初花、末花和叶片着色这四个物候期的反应。我们的研究表明,在草本和木本植物中,气候变暖会加快出叶和开花,但会推迟叶片着色。随着升温幅度的增加,草本植物大多数植物物候期的反应逐渐趋于平缓,而木本植物的物候反应则与升温幅度成正比。我们还发现,在所有物候期中,气候变暖对植物物候的实验效应都会随着时间的推移而减弱。具体来说,草本植物的初花变化率以及木本植物的落叶和叶色变化率随着实验时间的延长而降低。总之,这些结果表明,随着气温的不断升高,全球变暖对植物物候的实际影响将逐渐减弱。
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引用次数: 0
A new START. 新的开始
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-07-30 DOI: 10.1111/nph.20010
Michael Palmgren, Rosa Laura López-Marqués
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引用次数: 0
TurboID-based proteomic profiling reveals proxitome of ASK1 and CUL1 of the SCF ubiquitin ligase in plants. 基于 TurboID 的蛋白质组分析揭示了植物中 SCF 泛素连接酶的 ASK1 和 CUL1 的原基因组。
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-07-30 DOI: 10.1111/nph.20014
Fuai Sun, Natalie Hamada, Christian Montes, Yuanyuan Li, Nathan D Meier, Justin W Walley, Savithramma P Dinesh-Kumar, Nitzan Shabek
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引用次数: 0
The single RRM domain-containing protein SARP1 is required for establishment of the separation zone in Arabidopsis. 拟南芥分离区的建立需要含单RRM结构域的蛋白质SARP1。
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-07-26 DOI: 10.1111/nph.19997
Ju Yun, Inhye Lee, Jae Ho Lee, Seonghwan Kim, Su Hyun Jung, Sung Aeong Oh, Jiyoun Lee, Soon Ki Park, Moon-Soo Soh, Yuree Lee, June M Kwak

Abscission is the shedding of plant organs in response to developmental and environmental cues. Abscission involves cell separation between two neighboring cell types, residuum cells (RECs) and secession cells (SECs) in the floral abscission zone (AZ) in Arabidopsis thaliana. However, the regulatory mechanisms behind the spatial determination that governs cell separation are largely unknown. The class I KNOTTED-like homeobox (KNOX) transcription factor BREVIPEDICELLUS (BP) negatively regulates AZ cell size and number in Arabidopsis. To identify new players participating in abscission, we performed a genetic screen by activation tagging a weak complementation line of bp-3. We identified the mutant ebp1 (enhancer of BP1) displaying delayed floral organ abscission. The ebp1 mutant showed a concaved surface in SECs and abnormally stacked cells on the top of RECs, in contrast to the precisely separated surface in the wild-type. Molecular and histological analyses revealed that the transcriptional programming during cell differentiation in the AZ is compromised in ebp1. The SECs of ebp1 have acquired REC-like properties, including cuticle formation and superoxide production. We show that SEPARATION AFFECTING RNA-BINDING PROTEIN1 (SARP1) is upregulated in ebp1 and plays a role in the establishment of the cell separation layer during floral organ abscission in Arabidopsis.

脱落是植物器官根据发育和环境线索而脱落。脱落涉及拟南芥花脱落带(AZ)中两种相邻细胞类型--残基细胞(REC)和分离细胞(SEC)--之间的细胞分离。然而,细胞分离的空间决定背后的调控机制在很大程度上是未知的。I 类 KNOTTED-like homeobox(KNOX)转录因子 BREVIPEDICELLUS(BP)对拟南芥中 AZ 细胞的大小和数量具有负调控作用。为了确定参与脱落的新角色,我们通过活化标记 bp-3 的弱互补系进行了遗传筛选。我们发现突变体 ebp1(BP1 的增强子)表现出延迟的花器官脱落。ebp1 突变体的 SEC 表面凹陷,REC 顶部的细胞异常堆积,与野生型精确分离的表面形成鲜明对比。分子和组织学分析表明,ebp1的AZ细胞分化过程中的转录程序受到了影响。ebp1 的 SEC 具有类似 REC 的特性,包括角质层的形成和超氧化物的产生。我们的研究表明,在拟南芥花器官脱落过程中,分离影响 RNA 结合蛋白 1(SARP1)在 ebp1 中上调,并在细胞分离层的建立过程中发挥作用。
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引用次数: 0
Modulation of external and internal aluminum resistance by ALS3-dependent STAR1-mediated promotion of STOP1 degradation. 通过 ALS3 依赖性 STAR1 介导的 STOP1 降解促进对外部和内部铝抗性的调节。
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-07-26 DOI: 10.1111/nph.19985
Ni Fan, Xinbo Li, Wenxiang Xie, Xiang Wei, Qiu Fang, Jingyi Xu, Chao-Feng Huang

The ALMT1 transporter aids malate secretion, chelating Al3+ ions to form nontoxic Al-malate complexes, believed to exclude Al from the roots. However, the extent to which malate secreted by ALMT1 is solely used for the exclusion of Al3+ or can be reutilized by plant roots for internal Al tolerance remains uncertain. In our investigation, we explored the impact of malate secretion on both external and internal Al resistance in Arabidopsis thaliana. Additionally, we delved into the mechanism by which the tonoplast-localized bacterial-type ATP-binding cassette (ABC) transporter complex STAR1/ALS3 promotes the degradation of the Al resistance transcription factor STOP1 to regulate ALMT1 expression. Our study demonstrates that the level of secreted malate influences whether the Al-malate complex is excluded from the roots or transported into root cells. The nodulin 26-like intrinsic protein (NIP) subfamily members NIP1;1 and NIP1;2, located in the plasma membrane, coordinate with STAR1/ALS3 to facilitate Al-malate transport from root apoplasm to the symplasm and eventually to the vacuoles for the internal Al detoxification. ALS3-dependent STAR1 interacts with and promotes the degradation of STOP1, regulating malate exudation. Our findings demonstrate the dual roles of malate exudation in external Al exclusion and Al absorption for internal Al detoxification.

ALMT1 转运体有助于苹果酸盐分泌,螯合 Al3+ 离子形成无毒的 Al-苹果酸盐复合物,据信可将 Al 排出根部。然而,ALMT1 分泌的苹果酸在多大程度上仅用于排除 Al3+,或可被植物根系重新利用以提高内部对 Al 的耐受性,这一点仍不确定。在我们的研究中,我们探讨了苹果酸盐分泌对拟南芥外部和内部抗铝性的影响。此外,我们还深入研究了定位于吞吐体的细菌型 ATP 结合盒(ABC)转运体复合物 STAR1/ALS3 促进抗铝转录因子 STOP1 降解以调控 ALMT1 表达的机制。我们的研究表明,分泌的苹果酸水平会影响铝-苹果酸复合物是被排出根系还是被转运到根细胞。位于质膜上的点头素 26 样固有蛋白(NIP)亚家族成员 NIP1;1 和 NIP1;2 与 STAR1/ALS3 相互配合,促进铝-苹果酸从根细胞质运输到根细胞质,并最终运输到液泡进行内部铝解毒。依赖于 ALS3 的 STAR1 与 STOP1 相互作用并促进其降解,从而调节苹果酸盐的渗出。我们的研究结果证明了苹果酸盐渗出在外部铝排斥和内部铝吸收解毒中的双重作用。
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引用次数: 0
Theory and tests for coordination among hydraulic and photosynthetic traits in co-occurring woody species. 共生木本植物的水力和光合特性之间协调的理论和测试。
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-07-24 DOI: 10.1111/nph.19987
Shubham S Chhajed, Ian J Wright, Oscar Perez-Priego

Co-occurring plants show wide variation in their hydraulic and photosynthetic traits. Here, we extended 'least-cost' optimality theory to derive predictions for how variation in key hydraulic traits potentially affects the cost of acquiring and using water in photosynthesis and how this, in turn, should drive variation in photosynthetic traits. We tested these ideas across 18 woody species at a temperate woodland in eastern Australia, focusing on hydraulic traits representing different aspects of plant water balance, that is storage (sapwood capacitance, CS), demand vs supply (branch leaf : sapwood area ratio, AL : AS and leaf : sapwood mass ratio and ML : MS), access to soil water (proxied by predawn leaf water potential, ΨPD) and physical strength (sapwood density, WD). Species with higher AL : AS had higher ratio of leaf-internal to ambient CO2 concentration during photosynthesis (ci : ca), a trait central to the least-cost theory framework. CS and the daily operating range of tissue water potential (∆Ψ) had an interactive effect on ci : ca. CS, WD and ΨPD were significantly correlated with each other. These results, along with those from multivariate analyses, underscored the pivotal role leaf : sapwood allocation (AL : AS), and water storage (CS) play in coordination between plant hydraulic and photosynthetic systems. This study uniquely explored the role of hydraulic traits in predicting species-specific photosynthetic variation based on optimality theory and highlights important mechanistic links within the plant carbon-water balance.

共生植物的水力和光合特性差异很大。在这里,我们扩展了 "最低成本 "最优理论,以预测关键水力特征的变化如何潜在地影响光合作用中获取和使用水分的成本,以及这反过来又如何驱动光合作用特征的变化。我们对澳大利亚东部温带林地的 18 种木本植物进行了测试,重点研究了代表植物水分平衡不同方面的水力特征,即储水(边材电容,CS)、供求(枝叶与边材面积比,AL :AS和叶:边材质量比以及ML :MS)、对土壤水分的获取(以黎明前叶片水势ΨPD 表示)和物理强度(边材密度 WD)。AL :AS较高的物种在光合作用期间叶片内部与环境二氧化碳浓度之比(ci : ca)较高,这是最低成本理论框架的核心特征。CS 和组织水势(ΔΨ)的日工作范围对 ci : ca 有交互影响。CS、WD 和 ΨPD 之间存在显著的相关性。这些结果以及多元分析的结果都强调了叶片:边材分配(AL:AS)和储水(CS)在植物水力和光合系统协调中的关键作用。这项研究以最优性理论为基础,独特地探讨了水力特征在预测物种光合作用特异性变化中的作用,并强调了植物碳水平衡中的重要机理联系。
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引用次数: 0
Mechanical forces orchestrate the metabolism of the developing oilseed rape embryo. 机械力协调着发育中的油菜胚胎的新陈代谢。
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-07-24 DOI: 10.1111/nph.19990
Hardy Rolletschek, Aleksandra Muszynska, Jörg Schwender, Volodymyr Radchuk, Björn Heinemann, Alexander Hilo, Iaroslav Plutenko, Peter Keil, Stefan Ortleb, Steffen Wagner, Laura Kalms, André Gündel, Hai Shi, Jörg Fuchs, Jedrzej Jakub Szymanski, Hans-Peter Braun, Ljudmilla Borisjuk

The initial free expansion of the embryo within a seed is at some point inhibited by its contact with the testa, resulting in its formation of folds and borders. Although less obvious, mechanical forces appear to trigger and accelerate seed maturation. However, the mechanistic basis for this effect remains unclear. Manipulation of the mechanical constraints affecting either the in vivo or in vitro growth of oilseed rape embryos was combined with analytical approaches, including magnetic resonance imaging and computer graphic reconstruction, immunolabelling, flow cytometry, transcriptomic, proteomic, lipidomic and metabolomic profiling. Our data implied that, in vivo, the imposition of mechanical restraints impeded the expansion of testa and endosperm, resulting in the embryo's deformation. An acceleration in embryonic development was implied by the cessation of cell proliferation and the stimulation of lipid and protein storage, characteristic of embryo maturation. The underlying molecular signature included elements of cell cycle control, reactive oxygen species metabolism and transcriptional reprogramming, along with allosteric control of glycolytic flux. Constricting the space allowed for the expansion of in vitro grown embryos induced a similar response. The conclusion is that the imposition of mechanical constraints over the growth of the developing oilseed rape embryo provides an important trigger for its maturation.

种子内胚最初的自由膨胀会在某一时刻受到与种皮接触的抑制,从而形成褶皱和边界。虽然不太明显,但机械力似乎会触发并加速种子的成熟。然而,这种作用的机理基础仍不清楚。我们将影响油菜胚胎体内或体外生长的机械约束与分析方法相结合,包括磁共振成像和计算机图形重建、免疫标记、流式细胞术、转录组、蛋白质组、脂质组和代谢组分析。我们的数据表明,在体内,施加机械限制阻碍了种皮和胚乳的扩张,导致胚胎变形。胚胎成熟的特征是细胞停止增殖并刺激脂质和蛋白质储存,这意味着胚胎发育加速。潜在的分子特征包括细胞周期控制、活性氧代谢、转录重编程以及糖酵解通量的异构控制。限制体外培养胚胎的生长空间也会引起类似的反应。结论是,对发育中的油菜胚的生长施加机械限制为其成熟提供了重要的触发因素。
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引用次数: 0
m6A demethylase OsALKBH5 is required for double-strand break formation and repair by affecting mRNA stability in rice meiosis. 在水稻减数分裂过程中,m6A 去甲基化酶 OsALKBH5 通过影响 mRNA 的稳定性来促进双链断裂的形成和修复。
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-07-24 DOI: 10.1111/nph.19976
Feiyang Xue, Jie Zhang, Di Wu, Shiyu Sun, Ming Fu, Jie Wang, Iain Searle, Hongbo Gao, Wanqi Liang

N6-methyladenosine (m6A) RNA modification is the most prevalent messenger RNA (mRNA) modification in eukaryotes and plays critical roles in the regulation of gene expression. m6A is a reversible RNA modification that is deposited by methyltransferases (writers) and removed by demethylases (erasers). The function of m6A erasers in plants is highly diversified and their roles in cereal crops, especially in reproductive development essential for crop yield, are largely unknown. Here, we demonstrate that rice OsALKBH5 acts as an m6A demethylase required for the normal progression of male meiosis. OsALKBH5 is a nucleo-cytoplasmic protein, highly enriched in rice anthers during meiosis, that associates with P-bodies and exon junction complexes, suggesting that it is involved in regulating mRNA processing and abundance. Mutations of OsALKBH5 cause reduced double-strand break (DSB) formation, severe defects in DSB repair, and delayed meiotic progression, leading to complete male sterility. Transcriptome analysis and m6A profiling indicate that OsALKBH5-mediated m6A demethylation stabilizes the mRNA level of multiple meiotic genes directly or indirectly, including several genes that regulate DSB formation and repair. Our study reveals the indispensable role of m6A metabolism in post-transcriptional regulation of meiotic progression in rice.

N6- 甲基腺苷(m6A)RNA 修饰是真核生物中最常见的信使 RNA(mRNA)修饰,在基因表达调控中起着至关重要的作用。m6A 是一种可逆的 RNA 修饰,它由甲基转移酶(写入器)沉积,并由去甲基化酶(去除器)去除。m6A 侵蚀者在植物中的功能非常多样化,它们在谷类作物中的作用,尤其是在对作物产量至关重要的生殖发育中的作用,在很大程度上还不为人所知。在这里,我们证明水稻 OsALKBH5 是雄性减数分裂正常进行所需的 m6A 去甲基化酶。OsALKBH5 是一种核-胞质蛋白,在水稻花药减数分裂过程中高度富集,与 P 体和外显子连接复合体结合,表明它参与调节 mRNA 的加工和丰度。OsALKBH5 基因突变会导致双链断裂(DSB)形成减少、DSB 修复严重缺陷和减数分裂进程延迟,从而导致完全雄性不育。转录组分析和 m6A 分析表明,OsALKBH5 介导的 m6A 去甲基化直接或间接地稳定了多个减数分裂基因的 mRNA 水平,其中包括几个调控 DSB 形成和修复的基因。我们的研究揭示了 m6A 代谢在水稻减数分裂过程的转录后调控中不可或缺的作用。
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引用次数: 0
Polyploidy and environmental stress response: a comparative study of fern gametophytes. 多倍体与环境应激反应:蕨类配子体的比较研究。
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-07-24 DOI: 10.1111/nph.19969
Jennifer Blake-Mahmud, Emily B Sessa, Clayton J Visger, James E Watkins

Climate change is rapidly altering natural habitats and generating complex patterns of environmental stress. Ferns are major components of many forest understories and, given their independent gametophyte generation, may experience unique pressures in emerging temperature and drought regimes. Polyploidy is widespread in ferns and may provide a selective advantage in these rapidly changing environments. This work aimed to understand whether the gametophytes of allopolyploid ferns respond differently to climate-related physiological stress than their diploid parents. The experimental approach involved a multifactorial design with 27 treatment combinations including exposure to multiple levels of drought and temperature over three treatment durations, with recovery measured at multiple timepoints. We measured Chl fluorescence from over 2000 gametophytes to evaluate stress avoidance and tolerance in diploid and polyploid species. Polyploids generally showed a greater ability to avoid and/or tolerate a range of stress conditions compared with their diploid counterparts, suggesting that polyploidy may confer enhanced flexibility and resilience under climate stress. Overall, these results suggest that polyploidy may provide some resilience to climate change in mixed ploidy populations. However, all species remain susceptible to the impacts of extreme drought and heat stress.

气候变化正在迅速改变自然栖息地,并产生复杂的环境压力模式。蕨类植物是许多森林林下植物的主要组成部分,由于其配子体是独立生成的,因此可能会在新出现的温度和干旱环境中承受独特的压力。多倍体在蕨类植物中很普遍,可能会在这些快速变化的环境中提供选择性优势。这项研究旨在了解异源多倍体蕨类植物的配子体对气候相关生理压力的反应是否与其二倍体亲本不同。实验方法采用多因素设计,有27种处理组合,包括在三种处理持续时间内暴露于多种程度的干旱和温度,并在多个时间点测量恢复情况。我们测量了 2000 多个配子体的 Chl 荧光,以评估二倍体和多倍体物种对胁迫的规避和耐受性。与二倍体物种相比,多倍体物种普遍具有更强的规避和/或耐受一系列胁迫条件的能力,这表明多倍体物种在气候胁迫下可能具有更强的灵活性和恢复力。总之,这些结果表明,多倍体可能为混合倍性种群提供了一些抵御气候变化的能力。然而,所有物种仍然容易受到极端干旱和高温胁迫的影响。
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引用次数: 0
Actin-bundling protein fimbrin serves as a new auxin biosynthesis orchestrator in Arabidopsis root tips. 拟南芥根尖中的肌动蛋白结合蛋白fimbrin是一种新的辅助素生物合成协调因子。
IF 9.4 1区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2024-07-23 DOI: 10.1111/nph.19959
Yan-Kun Liu, Jing-Jing Li, Qiao-Qiao Xue, Shu-Juan Zhang, Min Xie, Ting Cheng, Hong-Li Wang, Cui-Mei Liu, Jin-Fang Chu, Yu-Sha Pei, Bing-Qian Jia, Jia Li, Li-Jun Tian, Ai-Gen Fu, Ya-Qi Hao, Hui Su

Plants delicately regulate endogenous auxin levels through the coordination of transport, biosynthesis, and inactivation, which is crucial for growth and development. While it is well-established that the actin cytoskeleton can regulate auxin levels by affecting polar transport, its potential role in auxin biosynthesis has remained largely unexplored. Using LC-MS/MS-based methods combined with fluorescent auxin marker detection, we observed a significant increase in root auxin levels upon deletion of the actin bundling proteins AtFIM4 and AtFIM5. Fluorescent observation, immunoblotting analysis, and biochemical approaches revealed that AtFIM4 and AtFIM5 affect the protein abundance of the key auxin synthesis enzyme YUC8 in roots. AtFIM4 and AtFIM5 regulate the auxin synthesis enzyme YUC8 at the protein level, with its degradation mediated by the 26S proteasome. This regulation modulates auxin synthesis and endogenous auxin levels in roots, consequently impacting root development. Based on these findings, we propose a molecular pathway centered on the 'actin cytoskeleton-26S proteasome-YUC8-auxin' axis that controls auxin levels. Our findings shed light on a new pathway through which plants regulate auxin synthesis. Moreover, this study illuminates a newfound role of the actin cytoskeleton in regulating plant growth and development, particularly through its involvement in maintaining protein homeostasis via the 26S proteasome.

植物通过协调运输、生物合成和灭活,微妙地调节内源植物生长素的水平,这对植物的生长和发育至关重要。肌动蛋白细胞骨架可以通过影响极性运输来调节植物生长素的水平,这一点已经得到公认,但它在植物生长素生物合成过程中的潜在作用在很大程度上仍未得到探索。利用基于 LC-MS/MS 的方法并结合荧光辅素标记检测,我们观察到删除肌动蛋白束蛋白 AtFIM4 和 AtFIM5 后,根辅素水平显著增加。荧光观察、免疫印迹分析和生化方法表明,AtFIM4 和 AtFIM5 会影响根中关键的辅素合成酶 YUC8 的蛋白丰度。AtFIM4和AtFIM5在蛋白水平上调控植物生长素合成酶YUC8,并由26S蛋白酶体介导其降解。这种调控调节了根中的辅素合成和内源辅素水平,从而影响了根的发育。基于这些发现,我们提出了一条以 "肌动蛋白细胞骨架-26S 蛋白酶体-YUC8-auxin "轴为中心的分子途径,该途径控制着植物生长素的水平。我们的发现揭示了植物调控植物生长素合成的新途径。此外,这项研究还揭示了肌动蛋白细胞骨架在调控植物生长和发育过程中的新作用,特别是通过 26S 蛋白酶体参与维持蛋白质的平衡。
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引用次数: 0
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