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Climate and microbial community composition drive shifts in ecosystem function along three parallel elevational gradients 气候和微生物群落组成驱动生态系统功能沿三个平行海拔梯度的变化
IF 4.7 1区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-09-22 DOI: 10.1002/ecog.07980
Congcong Shen, Michael K. Borregaard, Marcell K. Peters, Xin Jing, Akira S. Mori, Xinyu Xu, Zhi-Ming Zhang, Lin Zhang, Jonathan M. Adams, Baodong Chen, Guo-Xin Sun, Li-Mei Zhang, Yuan Ge

Mountains are home to steep elevational gradients in environmental factors, biodiversity and ecosystem functionality. Though these gradients are tightly connected, little is known about the relative contribution of environmental and biotic factors in driving elevational changes in ecosystem functionality. Here, we conducted a comprehensive survey of three > 2000 m long elevational gradients within the Hengduan Mountains region (southern China), quantifying key metrics of ecosystem functionality, as well as community composition and species richness of both plants and soil microbes. We found significant elevational patterns of plant and bacterial richness and ecosystem functionality, varying from unimodal (hump-shaped or U-shaped) to monotonic (linear) among the three mountains. Unexpectedly, plant and bacterial richness were either negatively or not significantly correlated with key indicators of ecosystem functionality. We further demonstrated that climate and soil pH were the key predictors of ecosystem functionality. Ecosystem functionality was additionally affected by changes of the bacterial species composition. Our results suggest that climate and microbial community composition jointly drive elevational changes in ecosystem functionality, with no clear role for species richness per se. These findings advance our understanding of mountain biogeography and the links between biodiversity and ecosystem function.

山区在环境因子、生物多样性和生态系统功能方面具有陡峭的海拔梯度。尽管这些梯度紧密相连,但人们对环境和生物因素在驱动生态系统功能海拔变化中的相对贡献知之甚少。在此基础上,作者对横断山区3个海拔2000 m的高程进行了综合调查,量化了生态系统功能的关键指标,以及植物和土壤微生物的群落组成和物种丰富度。研究发现,三山植物和细菌丰富度及生态系统功能的海拔分布具有明显的单峰(驼峰形或u形)和单调(线性)特征。出乎意料的是,植物和细菌丰富度与生态系统功能的关键指标呈负相关或不显著相关。我们进一步证明了气候和土壤pH值是生态系统功能的关键预测因子。生态系统功能还受细菌种类组成变化的影响。研究结果表明,气候和微生物群落组成共同驱动生态系统功能的海拔变化,物种丰富度本身没有明确的作用。这些发现促进了我们对山地生物地理学以及生物多样性与生态系统功能之间联系的认识。
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引用次数: 0
Performance of Cerrado lizards: a test of the center–periphery hypothesis 塞拉多蜥蜴的表现:中心-外围假说的检验
IF 4.7 1区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-09-18 DOI: 10.1002/ecog.07849
Ticiane de Lima Costa, Donald Bailey Miles, Guarino Rinaldi Colli

The center–periphery hypothesis (CPH) states that species' demographic performance declines from the center towards the periphery of their geographic range due to increasingly suboptimal environmental conditions. We tested the predictions under the CPH using two lizard lineages with different activity patterns and distributions, taking lizard body condition and gastrointestinal parasitism as proxies of demographic performance. We sampled Ameiva ameiva, Tropidurus itambere, and T. madeiramamore from core localities and peripheral Cerrado isolates in southwestern Amazonia. To assess predictions under the CPH, we built generalized linear mixed models using the indicators of demographic performance as the response variables. Environmental (climate, elevation, soil) and spatial (landscape parameters, distance to Cerrado's center and periphery) variables were predictor variables, along with lizard genus and their interactions. We applied generalized dissimilarity modeling (GDM) and variance partitioning to assess geographic, environmental, and spatial influences on parasite beta diversity. Lizard lineage was the most important predictor of body condition and lizard parasite abundance/richness. Centrality, connectivity, and precipitation of the warmest quarter significantly predicted lizard gastrointestinal parasitism. Soil, centrality, landscape, and elevation had a non-zero sum of coefficients in GDM's I-spline for lizard parasite beta diversity. Geographic distance had a negligible influence, and environmental variation was the primary driver of parasite beta diversity. For Ameiva, demographic performance did not vary across the sampled central and peripheral areas, both central to Ameiva's distribution, consistent with CPH predictions of stable demographic performance between central areas. Tropidurus displayed better body condition and higher parasite abundance in peripheral isolates, contrary to predictions under the CPH, likely due to ecological release. Soil and proximity to the Cerrado's center were the strongest predictors of parasite beta diversity, suggesting environmental and spatial factors outweigh biotic or climatic influences. These results suggest that the CPH's predictions may not always hold, especially when ecological release affects demographic performance.

中心-外围假说(CPH)认为,由于日益恶化的次优环境条件,物种的人口统计学表现从其地理范围的中心向外围下降。以两种不同活动模式和分布的蜥蜴类群为研究对象,以蜥蜴的身体状况和胃肠道寄生作为种群表现的指标,对CPH下的预测结果进行了检验。我们从亚马逊西南地区的核心地区和外围地区的塞拉多分离株中取样了美洲偃麦草、柽柳和马德拉玛氏蜱。为了评估CPH下的预测,我们建立了广义线性混合模型,使用人口统计表现指标作为响应变量。环境变量(气候、海拔、土壤)和空间变量(景观参数、到塞拉多中心和外围的距离)是预测变量,蜥蜴属及其相互作用也是预测变量。我们应用广义不相似模型(GDM)和方差划分来评估地理、环境和空间对寄生虫多样性的影响。蜥蜴血统是身体状况和蜥蜴寄生虫丰度/丰富度的最重要预测因子。中心性、连通性和最温暖季节的降水显著预测了蜥蜴的胃肠道寄生。土壤、中心性、景观和海拔在蜥蜴寄生虫β多样性的GDM i样条曲线中具有非零和的系数。地理距离的影响可以忽略不计,环境变化是寄生虫β多样性的主要驱动因素。对于Ameiva来说,人口统计表现在抽样的中心和外围地区没有变化,这两个地区都是Ameiva分布的中心,这与CPH对中心地区稳定人口统计表现的预测一致。与CPH下的预测相反,圆壁鹭外周分离物表现出较好的体况和较高的寄生虫丰度,这可能是生态释放的结果。土壤和靠近塞拉多中心是寄生虫多样性的最强预测因子,表明环境和空间因素大于生物或气候影响。这些结果表明,CPH的预测可能并不总是正确的,特别是当生态释放影响人口统计表现时。
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引用次数: 0
Direct effects and prey-mediated effects of global change in projections of early life stages of pelagic predators 远洋捕食者早期生命阶段预测全球变化的直接影响和猎物介导的影响
IF 4.7 1区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-09-08 DOI: 10.1002/ecog.07965
Raymond Czaja, Olivia Lestrade, Glenn Zapfe, Estrella Malca, Barbara Muhling

Global change will impact the distribution and abundance of predators through a combination of abiotic variables, such as temperature; and biotic variables, such as prey availability. However, there is a poor understanding of how distribution projections with biotic variables differ from those with abiotic variables, particularly in resource-limited marine systems. We address this knowledge gap using the planktonic larvae of iconic and economically important pelagic fish predators. We leverage a multidecadal, long-term sampling program from the western Atlantic Ocean to assess the efficacy of using zooplankton prey (copepods, larvaceans and cladocerans) and climate variables to predict the distribution of larvae of seven pelagic fish species, including tunas, billfishes and mahi-mahi. Zooplankton prey, particularly larvaceans, showed high importance for predicting the distribution of smaller tunas. Temperature showed high importance for true tuna Thunnus spp., billfish and mahi-mahi. Statistical models linking predator, prey and abiotic variables were forced with climate projections from an ensemble of earth system models to assess zooplankton and fish larvae distribution changes. Redistributions and declines of zooplankton prey led to minimal changes in abundance and distribution for most larval taxa. However, direct climate change effects, driven partially by ocean warming, led to increases in abundance and northward distribution shifts for multiple larval taxa. These climate change–zooplankton–fish larvae relationships highlight that future distribution and abundance changes of predators can be dampened when assessing impacts of prey availability changes. We also show that in a resource-limited system, key pelagic predators, many of which produce lucrative fisheries, are spatiotemporally linked with their preferred zooplankton prey.

全球变化将通过一系列非生物变量(如温度)影响捕食者的分布和数量;还有生物变量,比如猎物的可用性。然而,对于生物变量与非生物变量的分布预测有何不同,特别是在资源有限的海洋系统中,人们知之甚少。我们利用标志性和经济上重要的远洋鱼类捕食者的浮游幼体来解决这一知识差距。我们利用西大西洋多年来的长期采样计划来评估利用浮游动物猎物(桡足类、幼体和枝海洋动物)和气候变量来预测包括金枪鱼、长嘴鱼和mahi - mahi在内的七种中上层鱼类的幼虫分布的有效性。浮游动物的猎物,特别是幼鱼,对预测较小的金枪鱼的分布具有重要意义。温度对金枪鱼、长嘴鱼和鲭鱼具有重要意义。将捕食者、猎物和非生物变量联系起来的统计模型与来自地球系统模型集合的气候预测相结合,以评估浮游动物和鱼类幼虫的分布变化。浮游动物猎物的重新分布和减少导致大多数幼虫分类群的丰度和分布变化很小。然而,气候变化的直接影响(部分由海洋变暖驱动)导致多种幼虫类群的丰度增加和向北分布转移。这些气候变化-浮游动物-鱼类幼虫的关系强调,在评估猎物可用性变化的影响时,可以抑制捕食者未来的分布和丰度变化。我们还表明,在资源有限的系统中,主要的远洋捕食者(其中许多产生有利可图的渔业)与它们首选的浮游动物猎物在时空上存在联系。
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引用次数: 0
Network-based bioregionalization of demersal fish in continental shelf seas 基于网络的大陆架海底栖鱼类生物区域划分
IF 4.7 1区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-09-03 DOI: 10.1002/ecog.07683
Liam MacNeil, Marco Scotti

Biogeographical partitioning of ecological communities has been renewed in recent decades to illustrate broad distributional patterns. In the oceans, observational datasets have grown substantially and open new access to test bioregional patterns beyond classically fixed thresholds of endemism to differentiate regions. This work combines a recently collated dataset of 29 different scientific bottom trawl surveys spanning 21 years with network-based clustering to illustrate biogeographical partitions of vast tracts of the Northern Hemisphere's continental shelf seas. Our work contributes to testing bioregionalization patterns in demersal fishes using observational data, totaling 138 227 trawls and > 1700 species, with bipartite network clustering weighted by species occurrence frequencies. We propose eight major biogeographical partitions of marine demersal fish communities across shelf seas in the Northern Hemisphere. These patterns capture known biogeographical boundaries (e.g. North Sea–Baltic Sea, Cape Hatteras) alongside potential transition areas deduced from uncertainty estimates based on shared network nodes between bioregions. The most species-rich areas include the Southeast US Shelf, Temperate Pacific, Northeast Atlantic Shelf, and the Outer European Shelf – corresponding to relatively high endemicity. However, the relatively species-poor partitions including the Baltic Sea and the North and Celtic Seas display comparatively low endemicity (~10%), illustrating apparent statistical differences in partitions captured by bipartite networks and occurrence frequencies that would otherwise be missed using a fixed endemic criterion. Our proposed bioregionalization can be compared against the growing availability of species occurrence data, dispersal limitations, or other quantitative observations of ecological communities.

近几十年来,生态群落的生物地理划分得到了更新,以说明广泛的分布模式。在海洋中,观测数据集已大幅增长,并为测试生物区域模式开辟了新的途径,超出了传统固定的地方性阈值,以区分区域。这项工作结合了最近整理的29个不同的科学海底拖网调查数据集,跨越21年,以网络为基础的聚类来说明北半球大陆架海洋大片地区的生物地理分区。我们的工作有助于利用观测数据来测试底栖鱼类的生物区域化模式,总计138 227拖网和>; 1700种,采用物种发生频率加权的双部网络聚类。我们提出了北半球大陆架海域海洋底栖鱼类群落的八个主要生物地理分区。这些模式捕获了已知的生物地理边界(例如北海-波罗的海,哈特拉斯角)以及根据生物区域之间共享网络节点的不确定性估计推断出的潜在过渡区域。物种最丰富的地区包括美国东南部大陆架、温带太平洋、东北大西洋大陆架和欧洲外大陆架,对应于相对较高的地方性。然而,包括波罗的海、北海和凯尔特海在内的物种相对较少的分区显示出相对较低的地方性(~10%),这说明了由两部分网络捕获的分区的明显统计差异和发生频率,否则使用固定的地方性标准会错过这些差异。我们提出的生物区域化可以与不断增长的物种发生数据、扩散限制或其他生态群落的定量观察进行比较。
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引用次数: 0
Optimizing coordination and trade-offs between food security and biodiversity conservation goals 优化粮食安全和生物多样性保护目标之间的协调和权衡
IF 4.7 1区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-09-01 DOI: 10.1002/ecog.07939
Weirong Chen, Chenhao Huang, Xin Xu, Jinsong Deng

Balancing food security and biodiversity conservation – two often conflicting objectives – is essential for achieving global goals (e.g. SDG 2 and 15; GBF Targets 1, 3, and 10). While previous studies have explored global or national-level trade-offs, there is a lack of spatially explicit, scenario-based planning frameworks at regional scales to reconcile cropland expansion and biodiversity conservation. The study develops a multi-objective spatial planning framework to assess how future cropland expansion may be optimized to reduce biodiversity impacts while ensuring food security in the northwestern dry geo-eco region of China. It uses a random forest model trained with environmental, socio-economic, and trend variables to project cropland expansion from 2020 to 2030 and identify areas of spatial conflict with biodiversity priority regions. Results reveal intense conflicts in ecologically sensitive areas such as the Altai and Tianshan Mountains. Under a food security-first scenario, expanding 300 000 km2 of cropland would result in 167 978 km2 of conflict areas and a 12.20% habitat loss rate. In contrast, a biodiversity-priority scenario achieves only 199 782 km2 of cropland expansion, reducing habitat loss to 2.39%. A trade-off coordination scenario offers an optimized balance, enabling 300 000 km2 of cropland expansion while protecting 30% of biodiversity priority areas and limiting habitat loss to 3.52%. This study highlights a novel framework for integrating food security and biodiversity conservation, offering spatially explicit strategies to support region-specific sustainable land-use planning.

平衡粮食安全和生物多样性保护这两个经常相互冲突的目标,对于实现全球目标(例如可持续发展目标2和15;GBF具体目标1、3和10)至关重要。虽然以前的研究已经探索了全球或国家层面的权衡,但在区域尺度上缺乏空间明确的、基于情景的规划框架来协调耕地扩张和生物多样性保护。本研究建立了一个多目标空间规划框架,以评估中国西北干旱地理生态区未来如何优化耕地扩张,以减少生物多样性影响,同时确保粮食安全。该研究使用环境、社会经济和趋势变量训练的随机森林模型来预测2020年至2030年的耕地扩张,并确定与生物多样性优先区域的空间冲突区域。结果表明,在阿尔泰和天山等生态敏感地区,冲突十分激烈。在粮食安全优先的情景下,扩大30万平方公里的耕地将导致167 978平方公里的冲突地区和12.20%的栖息地损失率。相比之下,生物多样性优先情景仅实现了199 782平方公里的耕地扩张,将栖息地损失减少到2.39%。权衡协调方案提供了最佳的平衡,使30万平方公里的耕地得以扩大,同时保护了30%的生物多样性优先区,将栖息地损失限制在3.52%。本研究强调了整合粮食安全和生物多样性保护的新框架,为支持特定区域的可持续土地利用规划提供了明确的空间策略。
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引用次数: 0
Data integration improves species distribution forecasts under novel ocean conditions 数据整合改进了新海洋条件下的物种分布预测
IF 4.7 1区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-08-13 DOI: 10.1002/ecog.07997
Nima Farchadi, Camrin D. Braun, Martin C. Arostegui, Barbara A. Muhling, Elliott L. Hazen, Andrew J. Allyn, Kiva L. Oken, Rebecca L. Lewison

Accurate forecasts of species distributions in response to changing climate is essential for proactive management and conservation decision-making. However, species distribution models (SDMs) often have limited capacity to produce robust forecasts under novel environmental conditions, partly due to limitations in model training data. Model-based approaches that leverage diverse types of data have advanced over the last decade, yet their forecasting skill, especially during episodic climatic events, remains uncertain. Here, we develop a suite of SDMs for a commercially important fishery species, albacore tuna Thunnus alalunga, to evaluate forecast skill under marine heatwave conditions. We compare models that use different methods to leverage data sources (data-pooling versus joint-likelihood) and to address spatial dependence (environmental and spatial effects versus environmental-only) to assess their relative performance in predicting species distributions under novel environmental conditions. Our results indicate model performance declined across all model types as environmental novelty increased as expected. However, joint-likelihood approaches were more resilient to novel conditions, demonstrating greater predictive skill and ecological realism than traditional SDMs. These results suggest that ecological forecasts under novel environmental conditions are more skillful with a model framework that accounts for unmeasured spatial and temporal variability and uses model-based data integration to explicitly leverage diverse data types. As access to diverse data sources continues to increase, maximizing their utility will be key for delivering accurate forecasts of species distributions and advancing proactive, climate-ready management and conservation strategies.

准确预测物种分布以应对气候变化对主动管理和保护决策至关重要。然而,物种分布模型(SDMs)在新环境条件下产生稳健预测的能力往往有限,部分原因是模型训练数据的局限性。利用不同类型数据的基于模型的方法在过去十年中取得了进展,但其预测技巧,特别是在偶发性气候事件期间,仍然不确定。在这里,我们为一种重要的商业渔业物种长鳍金枪鱼(Thunnus alalunga)开发了一套SDMs,以评估海洋热浪条件下的预测技能。我们比较了使用不同方法来利用数据源(数据池与联合似然)和解决空间依赖性(环境和空间效应与仅环境)的模型,以评估它们在预测新环境条件下物种分布方面的相对性能。我们的研究结果表明,随着环境新颖性的增加,所有模型类型的模型性能都有所下降。然而,联合似然方法比传统SDMs更能适应新环境,表现出更强的预测能力和生态现实性。这些结果表明,在新环境条件下的生态预测更熟练地使用模型框架,该框架考虑了不可测量的时空变异性,并使用基于模型的数据集成来明确地利用不同的数据类型。随着对各种数据源的访问不断增加,最大限度地发挥其效用将是提供物种分布准确预测和推进积极主动、适应气候变化的管理和保护战略的关键。
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引用次数: 0
Where do we expect to find deep plant roots? 我们能在哪里找到植物的根呢?
IF 4.7 1区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-08-08 DOI: 10.1002/ecog.08034
G. Annie Mailloux, Mazvita Chikomo, Ying Fan

Plant roots have been observed up to 70 m in depth – what would compel a plant to root so deeply? Earlier work shows that the climate, soil and drainage all affect rooting depth, but with conflicting results. For example, both the deepest and shallowest roots are found in arid regions. Here, we compiled > 2400 globally distributed rooting-depth observations of individual plants and applied simple correlation analysis to assess the impact of global climate, local topography and substrate, and individual plant size, and their combinations controlling where and why plants root deeply. At the global scale, deep roots are driven by climate. Both concentrated wet periods and prolonged droughts are required to drive deep roots, and we find the deepest roots in semi-arid climates with strong precipitation seasonality or interannual variability. At the landscape scale, drainage modulates rooting depth. An accessible water table facilitates deep roots at midslopes, but it is too deep to impact roots further upslope. Instead, the deep vadose zone moisture reserve is the primary driver for deep rooting. Thus, the deepest roots are observed on well-drained uplands with deep vadose zones under climates with distinct wet and dry periods. At the plot scale, substrate structure and hydraulic properties modulate deep rooting – B-horizons limit deep roots, while woody plants often root below the bedrock surface, provided it is fractured. At the individual plant scale, deep roots are limited to high-biomass woody plants. Together, these findings sharpen our understanding of where and why plants root deeply, highlighting intersections of climate, drainage, terrain and biomass and identifying conditions where deep roots may serve as a lifeline during prolonged drought, meanwhile weathering rock, sequestering carbon, and bringing the living world far deeper than the conventional ‘root zone'.

植物的根被观察到深达70米——是什么迫使植物扎根如此之深?早期的研究表明,气候、土壤和排水都会影响生根深度,但结果相互矛盾。例如,最深和最浅的根都出现在干旱地区。在此,我们收集了2400个全球分布的单株植物根系深度观测数据,并应用简单相关分析来评估全球气候、当地地形和基质、单株大小及其组合对植物根系深度的影响。在全球范围内,深深扎根是由气候驱动的。在降水季节性或年际变异性较强的半干旱气候条件下,植物根系最深。在景观尺度上,排水调节生根深度。一个可接近的地下水位有利于在中坡深根,但太深影响根进一步上坡。相反,深层渗透带的水分储备是深层生根的主要驱动力。因此,在有明显干湿期的气候条件下,在排水良好的具有深渗透带的高地上观察到最深的根。在地块尺度上,基质结构和水力特性调节着深层生根——b层限制了深层根系,而木本植物通常在基岩表面以下生根,前提是基岩表面断裂。在单株尺度上,深根仅限于高生物量木本植物。总之,这些发现加深了我们对植物深深扎根的位置和原因的理解,突出了气候,排水,地形和生物量的交叉点,并确定了在长期干旱期间深根可能作为生命线的条件,同时风化岩石,隔离碳,并将生物世界带到比传统“根区”更深的地方。
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引用次数: 0
Wild bees and landcover: bee species' body size does not predict the scale of effect, but bee phenology predicts association with landcover type 野生蜜蜂与土地覆盖:蜜蜂物种的体型不能预测影响的规模,但蜜蜂物候可以预测与土地覆盖类型的关系
IF 4.7 1区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-07-28 DOI: 10.1002/ecog.07982
Dylan T. Simpson, Colleen Smith, Rachael Winfree

Habitat is a key aspect of any species' niche and can affect populations at multiple spatial scales. Basic ecology and effective conservation thus require an understanding of which habitats matter and at what scales. Yet, habitat studies are rarely scale-optimized, and what determines the scale(s) at which populations are affected by surrounding habitat (the ‘scale of effect') is poorly understood. In this study, we test the ‘mobility hypothesis,' which predicts that species with larger foraging ranges should have larger scales of effect. The mobility hypothesis is the most popular explanation of what determines species' scales of effect, but empirical support is mixed. We test the mobility hypothesis using wild bee species and, in doing so, also assess landscape-scale habitat associations of 84 bee species. We collected 30 376 specimens of 84 bee species from 165 sites in the northeastern USA and used linear models to determine landcover associations and scales of effect for each species. To test the mobility hypothesis, we asked whether scales of effect varied with two mobility-related traits – body size or sociality, which are the strongest known predictors of bee foraging ranges. Controlling the false discovery rate at 5%, we found 193 significant species–landcover associations across 60 (of 84) species. Scales of effect ranged from 100 to 8000 m (mode = 200 m; median = 1000 m) and, counter to the mobility hypothesis, were not associated with body size or sociality. As a result, we argue that ecologists should reconsider making assumptions about species' scales of effect and should instead explicitly measure scales of effect for their particular study organism and system. Considering the landcover associations themselves, we found these were broadly explained by phenology, with spring-flying bees being associated with forests and summer-flying bees being associated with more open, non-forested habitats.

生境是任何物种生态位的一个关键方面,可以在多个空间尺度上影响种群。因此,基本生态学和有效的保护需要了解哪些栖息地是重要的,在多大的范围内是重要的。然而,栖息地研究很少进行规模优化,并且人们对决定种群受周围栖息地影响的规模(“效应规模”)的理解甚少。在这项研究中,我们测试了“流动性假说”,该假说预测觅食范围较大的物种应该具有更大的效应尺度。流动性假说是决定物种效应尺度的最流行的解释,但经验支持却参差不齐。我们使用野生蜜蜂物种来验证迁移假说,并在此过程中评估了84种蜜蜂物种的景观尺度栖息地关联。我们从美国东北部165个地点收集了84种蜜蜂的30 376个标本,并使用线性模型确定了每个物种的土地覆盖关联和影响尺度。为了验证流动性假说,我们询问了影响尺度是否随两个与流动性相关的特征——体型或社会性——而变化,这两个特征是已知蜜蜂觅食范围的最强预测因子。将错误发现率控制在5%,我们发现了193个重要的物种-土地覆盖关联,涉及84个物种中的60个。效应尺度为100 ~ 8000 m(模态= 200 m;中位数= 1000米),与流动性假设相反,与体型或社会性无关。因此,我们认为生态学家应该重新考虑对物种效应尺度的假设,而应该明确地测量其特定研究有机体和系统的效应尺度。考虑到土地覆盖本身的关联,我们发现这些可以通过物候学得到广泛的解释,春季飞来的蜜蜂与森林有关,而夏季飞来的蜜蜂与更开放的非森林栖息地有关。
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引用次数: 0
Twenty years of dynamic occupancy models: a review of applications and look to the future 二十年的动态占用模式:应用回顾和展望未来
IF 5.9 1区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-07-22 DOI: 10.1002/ecog.07757
Saoirse Kelleher, Gurutzeta Guillera-Arroita, Jane Elith, Natalie J. Briscoe
Since their introduction over 20 years ago, dynamic occupancy models (DOMs) have become a powerful and flexible framework for estimating species occupancy across space and time while accounting for imperfect detection. As their popularity has increased and extensions have further expanded their capabilities, DOMs have been applied to increasingly diverse datasets and research objectives in applied ecology. At the same time, technological advancements have resulted in massive increases in available data, offering both new opportunities and challenges for users of DOMs. Given these developments, it is timely to examine common practices in building these models to understand the breadth of modelling approaches, determine potential vulnerabilities, and identify priorities for future research. We reviewed a sample of articles that have fit DOMs in the past 20 years, examining the contexts of their application and the approaches taken to the model‐building process. We find that these models have been used to pursue diverse objectives, based on datasets with wide‐ranging spatial and temporal scales collected using a variety of survey methods. Our comparisons of modelling approaches indicate that many applications of DOMs considered relatively few covariates on key model parameters, as well as a tendency towards linear responses over more complex non‐linear or interactive forms. Model selection techniques were largely idiosyncratic with little consensus on the best approaches, and model evaluation was rare across reviewed applications. Based on these findings we highlight aspects of the modelling process that merit closer attention, such as the possible impacts of low complexity and missing drivers of heterogeneity on model performance, the uncertainties around robust and appropriate model selection techniques for different contexts, and the need for trusted and reliable tools for model assessment and evaluation.
动态占用模型(DOMs)自20多年前被引入以来,已经成为一个强大而灵活的框架,用于估算物种在空间和时间上的占用,同时弥补了检测的不完善。随着dom的普及和扩展功能的进一步扩展,dom已被应用于越来越多的数据集和应用生态学的研究目标。与此同时,技术进步导致可用数据大量增加,为dom用户提供了新的机遇和挑战。鉴于这些发展,及时检查构建这些模型的常见实践,以了解建模方法的广度,确定潜在的漏洞,并确定未来研究的优先级。我们回顾了过去20年来适合dom的文章样本,研究了它们的应用背景和模型构建过程所采用的方法。我们发现这些模型已被用于追求不同的目标,基于使用各种调查方法收集的具有广泛空间和时间尺度的数据集。我们对建模方法的比较表明,dom的许多应用在关键模型参数上考虑了相对较少的协变量,并且在更复杂的非线性或交互形式上倾向于线性响应。模型选择技术在很大程度上是特殊的,在最佳方法上几乎没有共识,并且模型评估在审查的应用程序中很少。基于这些发现,我们强调了建模过程中值得密切关注的方面,例如低复杂性和缺失异质性驱动因素对模型性能的可能影响,围绕不同背景下稳健和适当的模型选择技术的不确定性,以及对可信和可靠的模型评估和评估工具的需求。
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引用次数: 0
Trends in marine species distribution models: a review of methodological advances and future challenges 海洋物种分布模型的趋势:方法进展和未来挑战的回顾
IF 5.9 1区 环境科学与生态学 Q1 BIODIVERSITY CONSERVATION Pub Date : 2025-07-22 DOI: 10.1002/ecog.07702
Moritz Klaassen, Tiago A. Marques, Filipe Alves, Marc Fernandez
Correlative species distribution models (SDMs) are quantitative tools in biogeography and macroecology. Building upon the ecological niche concept, they correlate environmental covariates to species presence to model habitat suitability and predict species distributions. Since their development, SDMs have undergone substantial advances in their predictive accuracy, benefiting from increased data availability, advanced machine learning algorithms, novel data integration procedures, refined model validation techniques, and incorporation of biotic predictors. Although initially applied in terrestrial systems, these models are now also widely used in the marine environment, recognized for their value in conservation planning, fisheries management, and understanding species responses to climate variability and change. Despite their increased application, SDMs face unique challenges when applied in the marine environment. These challenges include the three‐dimensional complexity of marine ecosystems, the availability of environmental covariates across suitable spatial and temporal scales, the dynamic properties of these covariates, and unique dispersal patterns and mobility traits of marine species. Here, we review recent methodological advances and emerging trends in marine SDMs. We highlight three‐dimensional modelling approaches that capture species distributions below the sea surface and assess the importance of temporal resolution, particularly for modelling highly mobile marine species in dynamic marine environments. Further, we discuss the expansion in the types of occurrence data being used, including fishery‐dependent and fishery‐independent sources, citizen science contributions, and satellite tracking data, along with the methods used to address their associated biases. We also explore and discuss novel methodologies for environmental data collection, such as remote‐sensing technologies and numeric ocean models, considering the existing limitations in spatial and temporal resolution. Together, our review synthesizes methodological innovations, highlights ongoing challenges, and discusses emerging trends within the extensive literature on marine SDMs.
相关物种分布模型(SDMs)是生物地理学和宏观生态学的定量工具。在生态位概念的基础上,他们将环境协变量与物种存在联系起来,以模拟栖息地适宜性并预测物种分布。自其发展以来,sdm在预测准确性方面取得了实质性进展,受益于增加的数据可用性,先进的机器学习算法,新颖的数据集成程序,精细的模型验证技术以及生物预测因子的结合。虽然最初应用于陆地系统,但这些模式现在也广泛用于海洋环境,因其在保护规划、渔业管理和了解物种对气候变率和变化的反应方面的价值而得到认可。尽管sdm的应用越来越广泛,但在海洋环境中应用时却面临着独特的挑战。这些挑战包括海洋生态系统的三维复杂性,在适当的时空尺度上环境协变量的可用性,这些协变量的动态特性,以及海洋物种独特的扩散模式和流动性特征。在这里,我们回顾了海洋sdm的最新方法进展和新兴趋势。我们重点介绍了三维建模方法,这些方法可以捕获海平面以下的物种分布,并评估时间分辨率的重要性,特别是对动态海洋环境中高度移动的海洋物种进行建模。此外,我们还讨论了所使用的发生数据类型的扩展,包括渔业依赖和渔业独立来源、公民科学贡献和卫星跟踪数据,以及用于解决其相关偏差的方法。考虑到现有的空间和时间分辨率的限制,我们还探索和讨论了环境数据收集的新方法,如遥感技术和数值海洋模型。总之,我们的综述综合了方法创新,突出了当前的挑战,并讨论了关于海洋sdm的广泛文献中的新兴趋势。
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引用次数: 0
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Ecography
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