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Processionary Caterpillars at the Edge of Complexity 复杂性边缘的毛毛虫游行。
IF 2.6 4区 计算机科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-01 DOI: 10.1162/artl_a_00420
Philippe Collard
This article deals with individuals moving in procession in real and artificial societies. A procession is a minimal form of society in which individual behavior is to go in a given direction and the organization is structured by the knowledge of the one ahead. This simple form of grouping is common in the living world, and, among humans, procession is a very circumscribed social activity whose origins are certainly very remote. This type of organization falls under microsociology, where the focus is on the study of direct interactions between individuals within small groups. In this article, we focus on the particular case of pine tree processionary caterpillars (Thaumetopoea pityocampa). In the first part, we propose a formal definition of the concept of procession and compare field experiments conducted by entomologists with agent-based simulations to study real caterpillars’ processionaries as they are. In the second part, we explore the life of caterpillars as they could be. First, by extending the model beyond reality, we can explain why real processionary caterpillars behave as they do. Then we report on field experiments on the behavior of real caterpillars artificially forced to follow a circular procession; these experiments confirm that each caterpillar can either be the leader of the procession or follow the one in front of it. In the third part, by allowing variations in the speed of movement on an artificial circular procession, computational simulations allow us to observe the emergence of unexpected mobile spatial structures built from regular polygonal shapes where chaotic movements and well-ordered forms are intimately linked. This confirms once again that simple rules can have complex consequences.
本文论述的是现实社会和人工社会中的个人行进问题。游行是一种最基本的社会形式,在这种社会中,个体的行为要朝着一个既定的方向前进,而组织结构则是由对前方个体的了解决定的。这种简单的分组形式在生物界很常见,而在人类中,游行是一种非常有限的社会活动,其起源肯定非常遥远。这种类型的组织属于微观社会学的范畴,其重点是研究小群体中个体之间的直接互动。在本文中,我们将重点研究松树游行毛虫(Thaumetopoea pityocampa)的特殊情况。在第一部分中,我们提出了 "游行 "概念的正式定义,并比较了昆虫学家进行的现场实验和基于代理的模拟,以研究真实的毛虫游行。在第二部分中,我们将探索毛毛虫可能的生活状态。首先,通过将模型扩展到现实之外,我们可以解释为什么真正的游行毛虫会有这样的行为。然后,我们报告了人为迫使真实毛虫跟随环形队伍的实地实验;这些实验证实,每只毛虫既可以是队伍的领头羊,也可以跟随前面的毛虫。在第三部分中,通过改变人工环形队伍的运动速度,计算模拟让我们观察到了由规则多边形构建的意想不到的移动空间结构的出现,在这种结构中,混乱的运动和井然有序的形式紧密相连。这再次证明,简单的规则可以产生复杂的结果。
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引用次数: 0
What Is Artificial Life Today, and Where Should It Go? 今天的人造生命是什么?
IF 2.6 4区 计算机科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-02-01 DOI: 10.1162/artl_e_00435
Alan Dorin;Susan Stepney
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引用次数: 0
Review of Model Systems in Biology: History, Philosophy, and Practical Concerns by Georg Striedter Georg Striedter 所著《生物学中的模型系统:历史、哲学和实际问题》评论
IF 2.6 4区 计算机科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-02-01 DOI: 10.1162/artl_r_00421
Leo S. D. Caves
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引用次数: 0
Emergent Resource Exchange and Tolerated Theft Behavior Using Multiagent Reinforcement Learning 利用多代理强化学习实现新兴资源交换和可容忍的盗窃行为
IF 2.6 4区 计算机科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-02-01 DOI: 10.1162/artl_a_00423
Jack Garbus;Jordan Pollack
For decades, the evolution of cooperation has piqued interest in numerous academic disciplines, such as game theory, economics, biology, and computer science. In this work, we demonstrate the emergence of a novel and effective resource exchange protocol formed by dropping and picking up resources in a foraging environment. This form of cooperation is made possible by the introduction of a campfire, which adds an extended period of congregation and downtime for agents to explore otherwise unlikely interactions. We find that the agents learn to avoid getting cheated by their exchange partners, but not always from a third party. We also observe the emergence of behavior analogous to tolerated theft, despite the lack of any punishment, combat, or larceny mechanism in the environment.
几十年来,合作的进化引起了博弈论、经济学、生物学和计算机科学等众多学科的兴趣。在这项研究中,我们展示了在觅食环境中通过丢弃和拾取资源形成的一种新颖而有效的资源交换协议。篝火的引入使这种合作形式成为可能,篝火增加了一段长时间的聚集和停歇时间,让代理探索原本不太可能的互动。我们发现,代理学会了避免被交换伙伴欺骗,但并不总是被第三方欺骗。我们还观察到,尽管环境中没有任何惩罚、战斗或盗窃机制,但出现了类似于可容忍盗窃的行为。
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引用次数: 0
A Survey of Recent Practice of Artificial Life in Visual Art 视觉艺术中人造生命的最新实践概览。
IF 2.6 4区 计算机科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-02-01 DOI: 10.1162/artl_a_00433
Zi-Wei Wu;Huamin Qu;Kang Zhang
Nowadays, interdisciplinary fields between Artificial Life, artificial intelligence, computational biology, and synthetic biology are increasingly emerging into public view. It is necessary to reconsider the relations between the material body, identity, the natural world, and the concept of life. Art is known to pave the way to exploring and conveying new possibilities. This survey provides a literature review on recent works of Artificial Life in visual art during the past 40 years, specifically in the computational and software domain. Having proposed a set of criteria and a taxonomy, we briefly analyze representative artworks of different categories. We aim to provide a systematic overview of how artists are understanding nature and creating new life with modern technology.
如今,人工生命、人工智能、计算生物学和合成生物学之间的跨学科领域越来越多地出现在公众视野中。我们有必要重新思考物质身体、身份、自然世界和生命概念之间的关系。众所周知,艺术为探索和传达新的可能性铺平了道路。本调查报告对过去 40 年间视觉艺术中的人工生命作品进行了文献综述,特别是在计算和软件领域。我们提出了一套标准和分类法,并简要分析了不同类别的代表性艺术作品。我们旨在系统地概述艺术家们是如何理解自然并利用现代技术创造新生命的。
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引用次数: 0
An Afterword to Rise of the Self-Replicators: Placing John A. Etzler, Frigyes Karinthy, Fred Stahl, and Others in the Early History of Thought About Self-Reproducing Machines 自我复制者的崛起》后记:将 John A. Etzler、Frigyes Karinthy、Fred Stahl 等人置于有关自我复制机器的早期思想史中。
IF 2.6 4区 计算机科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-02-01 DOI: 10.1162/artl_a_00424
Tim Taylor
This article is an afterword to the book Rise of the Self-Replicators: Early Visions of Machines, AI and Robots That Can Reproduce and Evolve, coauthored by Tim Taylor and Alan Dorin (2020). The book covered the early history of thought about self-reproducing and evolving machines, from initial speculations in the 17th century up to the early 1960s (from which point onward the more recent history is already well covered elsewhere). This article supplements the material discussed in the book by presenting several relevant sources that have come to the author’s attention since the book was published. The most significant additions to the history are from the German-born, 19th-century inventor and utopian John Adolphus Etzler in the 1830s–1840s, the Hungarian author and satirist Frigyes Karinthy in 1916, and the U.S. mathematician and computer scientist Fred Stahl in 1960.
本文是《自我复制者的崛起》一书的后记:自复制者的崛起:能复制和进化的机器、人工智能和机器人的早期设想》一书的后记,该书由蒂姆-泰勒(Tim Taylor)和艾伦-多林(Alan Dorin)合著(2020 年)。该书涵盖了有关自我复制和进化机器的早期思想史,从 17 世纪的最初猜测一直到 20 世纪 60 年代初(从那时起的近代史在其他地方已有详细介绍)。本文补充了书中讨论的材料,介绍了作者在该书出版后注意到的一些相关资料。对这段历史最重要的补充来自 19 世纪德国出生的发明家和乌托邦主义者约翰-阿道夫-埃茨勒(John Adolphus Etzler)(1830-1840 年代)、匈牙利作家和讽刺作家弗里杰斯-卡林西(Frigyes Karinthy)(1916 年)以及美国数学家和计算机科学家弗雷德-斯塔尔(Fred Stahl)(1960 年)。
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引用次数: 0
Motivations for Artificial Intelligence, for Deep Learning, for ALife: Mortality and Existential Risk 人工智能、深度学习和 ALife 的动机:死亡率与生存风险
IF 2.6 4区 计算机科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-02-01 DOI: 10.1162/artl_a_00427
Inman Harvey
We survey the general trajectory of artificial intelligence (AI) over the last century, in the context of influences from Artificial Life. With a broad brush, we can divide technical approaches to solving AI problems into two camps: GOFAIstic (or computationally inspired) or cybernetic (or ALife inspired). The latter approach has enabled advances in deep learning and the astonishing AI advances we see today—bringing immense benefits but also societal risks. There is a similar divide, regrettably unrecognized, over the very way that such AI problems have been framed. To date, this has been overwhelmingly GOFAIstic, meaning that tools for humans to use have been developed; they have no agency or motivations of their own. We explore the implications of this for concerns about existential risk for humans of the “robots taking over.” The risks may be blamed exclusively on human users—the robots could not care less.
在人工生命的影响下,我们回顾了上个世纪人工智能(AI)的总体发展轨迹。概括地说,我们可以把解决人工智能问题的技术方法分为两大阵营:人工智能(GOFAIstic)(或计算启发)或控制论(Cybernetic)(或人工生命启发)。后一种方法促成了深度学习的进步和我们今天看到的人工智能的惊人发展,带来了巨大的利益,但也带来了社会风险。令人遗憾的是,在此类人工智能问题的解决方式上也存在着类似的分歧,但这种分歧却未得到承认。迄今为止,人工智能问题的框架绝大多数都是 "全球人工智能 "式的,即开发出供人类使用的工具;这些工具没有自己的能动性或动机。我们将探讨这一点对 "机器人接管 "人类生存风险的影响。"这些风险可能完全归咎于人类用户--机器人根本不在乎。
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引用次数: 0
Review of Artificial Life: The Quest for a New Creation by Steven Levy 人造生命》评论史蒂文-李维的《新创造的探索
IF 2.6 4区 计算机科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-02-01 DOI: 10.1162/artl_r_00434
Riversdale Waldegrave
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引用次数: 0
Information, Coding, and Biological Function: The Dynamics of Life 信息、编码和生物功能:生命的动力
IF 2.6 4区 计算机科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-02-01 DOI: 10.1162/artl_a_00432
Julyan H. E. Cartwright;Jitka Čejková;Elena Fimmel;Simone Giannerini;Diego Luis Gonzalez;Greta Goracci;Clara Grácio;Jeanine Houwing-Duistermaat;Dragan Matić;Nataša Mišić;Frans A. A. Mulder;Oreste Piro
In the mid-20th century, two new scientific disciplines emerged forcefully: molecular biology and information-communication theory. At the beginning, cross-fertilization was so deep that the term genetic code was universally accepted for describing the meaning of triplets of mRNA (codons) as amino acids. However, today, such synergy has not taken advantage of the vertiginous advances in the two disciplines and presents more challenges than answers. These challenges not only are of great theoretical relevance but also represent unavoidable milestones for next-generation biology: from personalized genetic therapy and diagnosis to Artificial Life to the production of biologically active proteins. Moreover, the matter is intimately connected to a paradigm shift needed in theoretical biology, pioneered a long time ago, that requires combined contributions from disciplines well beyond the biological realm. The use of information as a conceptual metaphor needs to be turned into quantitative and predictive models that can be tested empirically and integrated in a unified view. Successfully achieving these tasks requires a wide multidisciplinary approach, including Artificial Life researchers, to address such an endeavour.
20 世纪中期,两门新的科学学科强势崛起:分子生物学和信息通讯理论。一开始,这两门学科的交叉融合如此之深,以至于遗传密码一词被普遍接受,用来描述作为氨基酸的 mRNA 三胞胎(密码子)的含义。然而,时至今日,这种协同作用并没有利用两个学科的飞速发展,而是挑战多于答案。这些挑战不仅具有重大的理论意义,而且是下一代生物学不可避免的里程碑:从个性化基因治疗和诊断到人工生命,再到生产具有生物活性的蛋白质。此外,这一问题与理论生物学所需的范式转变密切相关,而这一范式转变在很早以前就已开始,需要生物学领域以外的学科共同做出贡献。信息作为一种概念隐喻,需要转化为定量和预测模型,这些模型可以通过实证检验,并整合为一个统一的视图。要成功完成这些任务,需要广泛的多学科方法,包括人工生命研究人员,来解决这一问题。
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引用次数: 0
A Spatial Artificial Chemistry Implementation of a Gene Regulatory Network Aimed at Generating Protein Concentration Dynamics 旨在生成蛋白质浓度动态的基因调控网络的空间人工化学实现。
IF 2.6 4区 计算机科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-02-01 DOI: 10.1162/artl_a_00431
Iliya Miralavy;Wolfgang Banzhaf
Gene regulatory networks are networks of interactions in organisms responsible for determining the production levels of proteins and peptides. Mathematical and computational models of gene regulatory networks have been proposed, some of them rather abstract and called artificial regulatory networks. In this contribution, a spatial model for gene regulatory networks is proposed that is biologically more realistic and incorporates an artificial chemistry to realize the interaction between regulatory proteins called the transcription factors and the regulatory sites of simulated genes. The result is a system that is quite robust while able to produce complex dynamics similar to what can be observed in nature. Here an analysis of the impact of the initial states of the system on the produced dynamics is performed, showing that such models are evolvable and can be directed toward producing desired protein dynamics.
基因调控网络是生物体内的相互作用网络,负责决定蛋白质和肽的生产水平。基因调控网络的数学模型和计算模型已被提出,其中一些比较抽象,被称为人工调控网络。本文提出的基因调控网络空间模型更符合生物学实际,并结合了人工化学,以实现称为转录因子的调控蛋白与模拟基因的调控位点之间的相互作用。其结果是一个相当稳健的系统,同时能够产生与自然界中观察到的类似的复杂动态。在这里,我们分析了系统初始状态对所产生动态的影响,表明这种模型是可进化的,并可定向产生所需的蛋白质动态。
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引用次数: 0
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Artificial Life
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