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Self-Reproduction and Evolution in Cellular Automata: 25 Years After Evoloops 细胞自动机的自我繁殖与进化:Evoloops 25 年之后
IF 2.6 4区 计算机科学 Q4 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2024-09-13 DOI: 10.1162/artl_a_00451
Hiroki Sayama, Chrystopher L. Nehaniv
The year 2024 marks the 25th anniversary of the publication of evoloops, an evolutionary variant of Chris Langton’s self-reproducing loops, which proved constructively that Darwinian evolution of self-reproducing organisms by variation and natural selection is possible within deterministic cellular automata. Over the last few decades, this line of Artificial Life research has since undergone several important developments. Although it experienced a relative dormancy of activity for a while, the recent rise of interest in open-ended evolution and the success of continuous cellular automata models have brought researchers’ attention back to how to make spatiotemporal patterns self-reproduce and evolve within spatially distributed computational media. This article provides a review of the relevant literature on this topic over the past 25 years and highlights the major accomplishments made so far, the challenges being faced, and promising future research directions.
2024 年是克里斯-兰顿(Chris Langton)的自繁殖循环(self-reproducing loops)的进化变体 evoloops 发表 25 周年,它建设性地证明了在确定性细胞自动机中通过变异和自然选择实现自繁殖生物的达尔文进化是可能的。在过去的几十年里,人工生命研究经历了几个重要的发展阶段。虽然这一领域的研究活动曾一度相对沉寂,但最近人们对开放式进化的兴趣日渐浓厚,连续细胞自动机模型也取得了巨大成功,这些都让研究人员重新关注如何在空间分布式计算介质中实现时空模式的自我复制和进化。本文回顾了过去 25 年来有关这一主题的相关文献,重点介绍了迄今为止取得的主要成就、面临的挑战以及未来有希望的研究方向。
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引用次数: 0
Emergence of Self-Replicating Hierarchical Structures in a Binary Cellular Automaton. 二元细胞自动机中自复制分层结构的出现
IF 1.6 4区 计算机科学 Q4 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2024-08-16 DOI: 10.1162/artl_a_00449
Bo Yang

We have discovered a novel transition rule for binary cellular automata (CAs) that yields self-replicating structures across two spatial and temporal scales from sparse random initial conditions. Lower-level, shape-shifting clusters frequently follow a transient attractor trajectory, generating new clusters, some of which periodically self-duplicate. When the initial distribution of live cells is sufficiently sparse, these clusters coalesce into larger formations that also self-replicate. These formations may further form the boundaries of an expanding complex on an even larger scale. This rule, dubbed "Outlier," is rotationally symmetric and applies to 2-D Moore neighborhoods. It was evolved through genetic programming during an extensive search for rules that foster open-ended evolution in CAs. While self-replicating structures, both crafted and emergent, have been created in CAs with state sets intentionally designed for this purpose, the Outlier may be the first known rule to facilitate nontrivial emergent self-replication across two spatial scales in binary CAs.

我们发现了一种新颖的二元细胞自动机(CA)过渡规则,它能从稀疏的随机初始条件中产生跨越两个空间和时间尺度的自我复制结构。低级的、形状可变的细胞簇经常遵循瞬态吸引子轨迹,产生新的细胞簇,其中一些细胞簇会周期性地自我复制。当活细胞的初始分布足够稀疏时,这些细胞簇会凝聚成更大的形态,这些形态也会自我复制。这些形态可能会进一步形成规模更大的扩展复合体的边界。这种被称为 "离群者 "的规则是旋转对称的,适用于二维摩尔邻域。它是在广泛寻找促进 CA 开放式进化的规则的过程中,通过遗传编程进化而来的。在二元CA中,人们已经通过有意设计的状态集创建了自我复制结构,包括精心制作的和突发的结构,而 "离群者 "可能是第一个在二元CA中促进跨越两个空间尺度的非难突发自我复制的已知规则。
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引用次数: 0
Editorial: Special Issue "The Distributed Ghost"-Cellular Automata, Distributed Dynamical Systems, and Their Applications to Intelligence. 编辑:特刊 "分布式幽灵"--细胞自动机、分布式动力系统及其在智能领域的应用。
IF 1.6 4区 计算机科学 Q4 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2024-08-16 DOI: 10.1162/artl_e_00450
Stefano Nichele, Hiroki Sayama, Eric Medvet, Chrystopher Nehaniv, Mario Pavone
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引用次数: 0
How Perception, Actuation, and Communication Impact the Emergence of Collective Intelligence in Simulated Modular Robots. 感知、执行和交流如何影响仿真模块化机器人集体智慧的形成。
IF 1.6 4区 计算机科学 Q4 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2024-08-15 DOI: 10.1162/artl_a_00447
Francesco Rusin, Eric Medvet

Modular robots are collections of simple embodied agents, the modules, that interact with each other to achieve complex behaviors. Each module may have a limited capability of perceiving the environment and performing actions; nevertheless, by behaving coordinately, and possibly by sharing information, modules can collectively perform complex actions. In principle, the greater the actuation, perception, and communication abilities of the single module are the more effective is the collection of modules. However, improved abilities also correspond to more complex controllers and, hence, larger search spaces when designing them by means of optimization. In this article, we analyze the impact of perception, actuation, and communication abilities on the possibility of obtaining good controllers for simulated modular robots, that is, controllers that allow the robots to exhibit collective intelligence. We consider the case of modular soft robots, where modules can contract, expand, attach, and detach from each other, and make them face two tasks (locomotion and piling), optimizing their controllers with evolutionary computation. We observe that limited abilities often do not prevent the robots from succeeding in the task, a finding that we explain with (a) the smaller search space corresponding to limited actuation, perception, and communication abilities, which makes the optimization easier, and (b) the fact that, for this kind of robot, morphological computation plays a significant role. Moreover, we discover that what matters more is the degree of collectivity the robots are required to exhibit when facing the task.

模块机器人是由简单的实体代理(即模块)组成的集合体,模块之间相互影响,从而实现复杂的行为。每个模块感知环境和执行动作的能力可能有限;然而,通过协调行为和可能的信息共享,模块可以集体执行复杂的动作。原则上讲,单个模块的执行、感知和通信能力越强,模块集合就越有效。然而,能力越强,控制器也就越复杂,因此在通过优化手段设计控制器时,搜索空间也就越大。在本文中,我们分析了感知、执行和通信能力对模拟模块化机器人获得良好控制器的可能性的影响,也就是能让机器人表现出集体智能的控制器。我们考虑了模块化软体机器人的情况,模块之间可以收缩、扩张、连接和分离,并让它们面对两项任务(运动和打桩),用进化计算优化它们的控制器。我们发现,有限的能力往往并不妨碍机器人成功完成任务,我们对这一发现的解释是:(a)有限的执行、感知和通信能力对应较小的搜索空间,这使得优化更容易;(b)对于这种机器人,形态计算发挥了重要作用。此外,我们还发现,更重要的是机器人在面对任务时需要表现出的集体主义精神。
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引用次数: 0
Evolving Novel Gene Regulatory Networks for Structural Engineering Designs. 为结构工程设计开发新的基因调控网络
IF 1.6 4区 计算机科学 Q4 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2024-08-15 DOI: 10.1162/artl_a_00448
Rahul Dubey, Simon Hickinbotham, Andrew Colligan, Imelda Friel, Edgar Buchanan, Mark Price, Andy M Tyrrell

Engineering design optimization poses a significant challenge, usually requiring human expertise to discover superior solutions. Although various search techniques have been employed to generate diverse designs, their effectiveness is often limited by problem-specific parameter tuning, making them less generalizable and scalable. This article introduces a framework inspired by evolutionary and developmental (evo-devo) concepts, aiming to automate the evolution of structural engineering designs. In biological systems, evo-devo governs the growth of single-cell organisms into multicellular organisms through the use of gene regulatory networks (GRNs). GRNs are inherently complex and highly nonlinear, and this article explores the use of neural networks and genetic programming as artificial representations of GRNs to emulate such behaviors. To evolve a wide range of Pareto fronts for artificial GRNs, this article introduces a new technique, a real value-encoded neuroevolutionary method termed real-encoded NEAT (RNEAT). The performance of RNEAT is compared with that of two well-known evolutionary search techniques across different 2-D and 3-D problems. The experimental results demonstrate two key findings. First, the proposed framework effectively generates a population of GRNs that can produce diverse structures for both 2-D and 3-D problems. Second, the proposed RNEAT algorithm outperforms its competitors on more than 50% of the problems examined. These results validate the proof of concept underlying the proposed evo-devo-based engineering design evolution.

工程设计优化是一项巨大的挑战,通常需要人类的专业知识来发现优秀的解决方案。虽然人们已经采用了各种搜索技术来生成多样化的设计,但它们的有效性往往受到特定问题参数调整的限制,因此通用性和可扩展性较差。本文介绍了一个受进化和发展(evo-devo)概念启发的框架,旨在实现结构工程设计的自动进化。在生物系统中,进化-退化通过使用基因调控网络(GRN)来控制单细胞生物向多细胞生物的生长。基因调控网络本质上是复杂和高度非线性的,本文探讨了如何利用神经网络和遗传编程作为基因调控网络的人工代表来模拟这种行为。为了为人工 GRN 演化出各种帕累托前沿,本文介绍了一种新技术,即实值编码神经进化法,称为实值编码神经进化法(RNEAT)。在不同的二维和三维问题上,RNEAT 的性能与两种著名的进化搜索技术进行了比较。实验结果证明了两个重要发现。首先,所提出的框架能有效生成 GRNs 群体,从而为二维和三维问题生成多样化的结构。其次,所提出的 RNEAT 算法在超过 50% 的问题上优于其竞争对手。这些结果验证了所提出的基于进化发展的工程设计进化概念。
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引用次数: 0
Evolved Open-Endedness in Cultural Evolution: A New Dimension in Open-Ended Evolution Research. 文化进化中的开放性:开放式进化研究的新维度》。
IF 1.6 4区 计算机科学 Q4 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2024-08-01 DOI: 10.1162/artl_a_00406
James M Borg, Andrew Buskell, Rohan Kapitany, Simon T Powers, Eva Reindl, Claudio Tennie

The goal of Artificial Life research, as articulated by Chris Langton, is "to contribute to theoretical biology by locating life-as-we-know-it within the larger picture of life-as-it-could-be." The study and pursuit of open-ended evolution in artificial evolutionary systems exemplify this goal. However, open-ended evolution research is hampered by two fundamental issues: the struggle to replicate open-endedness in an artificial evolutionary system and our assumption that we only have one system (genetic evolution) from which to draw inspiration. We argue not only that cultural evolution should be seen as another real-world example of an open-ended evolutionary system but that the unique qualities seen in cultural evolution provide us with a new perspective from which we can assess the fundamental properties of, and ask new questions about, open-ended evolutionary systems, especially with regard to evolved open-endedness and transitions from bounded to unbounded evolution. Here we provide an overview of culture as an evolutionary system, highlight the interesting case of human cultural evolution as an open-ended evolutionary system, and contextualize cultural evolution by developing a new framework of (evolved) open-ended evolution. We go on to provide a set of new questions that can be asked once we consider cultural evolution within the framework of open-ended evolution and introduce new insights that we may be able to gain about evolved open-endedness as a result of asking these questions.

正如克里斯-兰顿(Chris Langton)所阐述的那样,人工生命研究的目标是 "通过将我们已知的生命定位在生命可能的更大范围内,为理论生物学做出贡献"。在人工进化系统中研究和追求开放式进化正是这一目标的体现。然而,开放式进化研究受到两个基本问题的阻碍:一是在人工进化系统中复制开放式进化的困难,二是我们假设只有一个系统(遗传进化)可以从中汲取灵感。我们认为,文化进化不仅应被视为开放式进化系统在现实世界中的另一个例子,而且文化进化的独特性为我们提供了一个新的视角,我们可以从这个视角评估开放式进化系统的基本属性,并提出有关开放式进化系统的新问题,特别是有关进化的开放性以及从有界进化到无界进化的过渡问题。在此,我们概述了作为进化系统的文化,重点介绍了作为开放式进化系统的人类文化进化这一有趣案例,并通过建立一个(进化的)开放式进化的新框架对文化进化进行了背景分析。接下来,我们将提出一系列新的问题,一旦我们在开放式进化的框架内考虑文化进化,就可以提出这些问题,并介绍提出这些问题后我们可能会对进化的开放性获得的新见解。
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引用次数: 0
Interaction Rules Supporting Effective Flocking Behavior. 支持有效成群行为的互动规则
IF 1.6 4区 计算机科学 Q4 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2024-08-01 DOI: 10.1162/artl_a_00438
Nicola Milano, Stefano Nolfi

Several simulation models have demonstrated how flocking behavior emerges from the interaction among individuals that react to the relative orientation of their neighbors based on simple rules. However, the precise nature of these rules and the relationship between the characteristics of the rules and the efficacy of the resulting collective behavior are unknown. In this article, we analyze the effect of the strength with which individuals react to the orientation of neighbors located in different sectors of their visual fields and the benefit that could be obtained by using control rules that are more elaborate than those normally used. Our results demonstrate that considering only neighbors located on the frontal side of the visual field permits an increase in the aggregation level of the swarm. Using more complex rules and/or additional sensory information does not lead to better performance.

一些模拟模型已经证明了成群行为是如何从个体间的相互作用中产生的,这些个体根据简单的规则对其邻居的相对方位做出反应。然而,这些规则的确切性质以及规则的特征与由此产生的集体行为的有效性之间的关系尚不清楚。在本文中,我们分析了个体对位于其视野不同区域的邻居的方位做出反应的强度所产生的影响,以及使用比通常使用的控制规则更复杂的控制规则所能带来的益处。我们的研究结果表明,只考虑位于视野正面的邻居可以提高蜂群的聚集水平。使用更复杂的规则和/或额外的感官信息并不会带来更好的性能。
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引用次数: 0
Self-Organization and Phase Transitions in Driven Cellular Automata. 驱动型细胞自动机的自组织和相变
IF 1.6 4区 计算机科学 Q4 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2024-08-01 DOI: 10.1162/artl_a_00437
J Hank Rainwater

The Game of Life (GoL) cellular automaton is modified to inject order during execution of the state transition algorithm by making selected stable structures permanently active while interacting with normal active sites to create novel structures. A survey of the modified automaton's phenomenology and an analysis of its dynamics are presented in the context of the physics of the self-organization of matter by viewing the GoL as an artificial chemistry. These new structures become seeds for additional phases of structure building, analogous to nature's gravitational and thermodynamic churning of the geosphere that created material structures in phases, beginning the transition from geochemistry to prebiotic chemistry and laying foundational substrates for life-enabling organizational processes in an emerging biosphere. Evidence of selective self-assembly during phase transitions is reported where several GoL still life structures, configured as permanently active seeds evolving with random collections of active sites, resulted in geometrically identical structures as the GoL reached an equilibrium state of static density.

对 "生命游戏"(GoL)细胞自动机进行了改进,通过使选定的稳定结构永久处于活跃状态,同时与正常的活跃点相互作用以创建新结构,从而在执行状态转换算法时注入秩序。通过将 GoL 视为一种人工化学,在物质自组织物理学的背景下,对改进后的自动机现象学进行了调查,并对其动力学进行了分析。这些新结构成为结构构建其他阶段的种子,类似于大自然对地圈的引力和热力学搅动,分阶段创造物质结构,开始从地球化学过渡到前生物化学,并为新兴生物圈的生命组织过程奠定基础。据报道,在相变过程中选择性自组装的证据表明,当地球圈达到静态密度平衡状态时,几个地球圈静态生命结构被配置为永久活性种子,并与随机的活性位点集合一起演化,从而形成了几何上完全相同的结构。
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引用次数: 0
A Word From the Editors (Editorial 30:3). 编辑的话》(第 30:3 期社论)。
IF 1.6 4区 计算机科学 Q4 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2024-08-01 DOI: 10.1162/artl_e_00446
Alan Dorin, Susan Stepney
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引用次数: 0
On the Open-Endedness of Detecting Open-Endedness. 论检测开放性的开放性。
IF 1.6 4区 计算机科学 Q4 COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE Pub Date : 2024-08-01 DOI: 10.1162/artl_a_00399
Susan Stepney, Simon Hickinbotham

We argue that attempting to quantify open-endedness misses the point: The nature of open-endedness is such that an open-ended system will eventually move outside its current model of behavior, and hence outside any measure based on that model. This presents a challenge for analyzing Artificial Life systems, leading us to conclude that the focus should be on understanding the mechanisms underlying open-endedness, not simply on attempting to quantify it. To demonstrate this, we apply several measures to eight long experimental runs of the spatial version of the Stringmol automata chemistry. These experiments were originally designed to examine the hypothesis that spatial structure provides a defense against parasites. The runs successfully show this defense, but also show a range of innovative, and possibly open-ended, behaviors involved in countering a parasitic arms race. Commencing with system-generic measures, we develop and use a variety of measures dedicated to analyzing some of these innovations. We argue that a process of analysis, starting with system-generic measures but going on to system-specific measures, will be needed wherever the phenomenon of open-endedness is involved.

我们认为,试图量化 "开放式 "并没有达到目的:开放性的本质决定了开放式系统最终会超出其当前的行为模型,从而超出任何基于该模型的衡量标准。这给人工生命系统的分析带来了挑战,使我们得出结论:重点应放在理解开放性的内在机制上,而不是简单地试图量化它。为了证明这一点,我们对 Stringmol 自动机化学空间版本的八次长时间实验运行采用了几种测量方法。这些实验最初是为了验证空间结构能抵御寄生虫的假说。这些实验成功地展示了这种防御能力,同时也展示了一系列创新的、可能是开放式的、参与对抗寄生虫军备竞赛的行为。我们从系统一般测量方法入手,开发并使用了多种专门用于分析其中一些创新的测量方法。我们认为,在涉及开放性现象的地方,都需要一个分析过程,从系统一般的测量方法开始,到系统特定的测量方法。
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引用次数: 0
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Artificial Life
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