Pub Date : 2026-01-07DOI: 10.1016/j.aquaculture.2026.743626
Qiuxi Yang , Shunan Jiang , Qin Liu , Dahai Yang , Zhuang Wang
Thrombocytes are nucleated hemostatic cells in teleost fish, known to function in coagulation and to play significant roles in immune regulation. However, the immune-related functions and characteristics of thrombocytes in turbot (Scophthalmus maximus) remain largely unexplored. In this study, we identified itgb3a as a highly expressed marker gene in turbot thrombocytes. Besides, we generated a polyclonal antibody targeting the conserved domain of ITGB3a and successfully isolated thrombocytes from turbot peripheral blood leukocytes. These isolated cells exhibited spherical or fusiform morphology with prominent pseudopodia and intracellular granules. Moreover, an in-depth reanalysis of single-cell transcriptomic data from our previous study uncovered a dynamic shift in the transcriptional profile of thrombocytes during infection, consistent with a change from innate immune responses to functions in metabolism and coagulation. Initially (3 dpi), their transcriptome was enriched for innate immune responses, and subsequently shifted towards metabolic regulation and coagulation homeostasis at 7–14 dpi. Furthermore, we demonstrated that proportion of turbot thrombocyte dynamically increased at 3 dpi, and observed the intracellular localization of bacteria within thrombocytes through in vitro assays with GFP-labeled Edwardsiella piscicida. Taken together, this study provides foundational insights into the functional characteristics of turbot thrombocytes during bacterial infection. Our findings offer valuable resources for advancing the understanding of fish thrombocyte biology and establish a basis for future exploration of potential therapeutic targets.
{"title":"Marker genes identification and functional characterization of thrombocytes in turbot (Scophthalmus maximus)","authors":"Qiuxi Yang , Shunan Jiang , Qin Liu , Dahai Yang , Zhuang Wang","doi":"10.1016/j.aquaculture.2026.743626","DOIUrl":"10.1016/j.aquaculture.2026.743626","url":null,"abstract":"<div><div>Thrombocytes are nucleated hemostatic cells in teleost fish, known to function in coagulation and to play significant roles in immune regulation. However, the immune-related functions and characteristics of thrombocytes in turbot (<em>Scophthalmus maximus</em>) remain largely unexplored. In this study, we identified <em>itgb3a</em> as a highly expressed marker gene in turbot thrombocytes. Besides, we generated a polyclonal antibody targeting the conserved domain of ITGB3a and successfully isolated thrombocytes from turbot peripheral blood leukocytes. These isolated cells exhibited spherical or fusiform morphology with prominent pseudopodia and intracellular granules. Moreover, an in-depth reanalysis of single-cell transcriptomic data from our previous study uncovered a dynamic shift in the transcriptional profile of thrombocytes during infection, consistent with a change from innate immune responses to functions in metabolism and coagulation. Initially (3 dpi), their transcriptome was enriched for innate immune responses, and subsequently shifted towards metabolic regulation and coagulation homeostasis at 7–14 dpi. Furthermore, we demonstrated that proportion of turbot thrombocyte dynamically increased at 3 dpi, and observed the intracellular localization of bacteria within thrombocytes through in vitro assays with GFP-labeled <em>Edwardsiella piscicida</em>. Taken together, this study provides foundational insights into the functional characteristics of turbot thrombocytes during bacterial infection. Our findings offer valuable resources for advancing the understanding of fish thrombocyte biology and establish a basis for future exploration of potential therapeutic targets.</div></div>","PeriodicalId":8375,"journal":{"name":"Aquaculture","volume":"615 ","pages":"Article 743626"},"PeriodicalIF":3.9,"publicationDate":"2026-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145923285","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-07DOI: 10.1016/j.aquaculture.2026.743625
Junjiang Liu , Liping Wang , Xin Jia , Qinxuan Li , Lu Zhang , Mengqiang Wang
Acute hepatopancreatic necrosis disease (AHPND), caused by Vibrio parahaemolyticus harboring specific virulence plasmids, results in high mortality in Litopenaeus vannamei and leads to substantial economic losses in shrimp farming. No effective treatments currently exist for AHPND, so the development of rapid and accurate pathogen detection methods is essential for early detection of infected individuals, allowing timely intervention to prevent large-scale outbreaks and ultimately reduce economic losses. Recombinase polymerase amplification (RPA) is an ideal on-site detection method, offering rapid results, high sensitivity, and the ability to operate at low temperatures. The RPA visualization method primarily depends on gel electrophoresis, which increases complexity and requires advanced equipment, thus limiting its field applicability. Therefore, improving the RPA visualization technique is crucial for enabling on-site detection. This study systematically assessed 14 nucleic acid dyes for visualizing RPA results. Diamond Nucleic Acid Dye, at a 1000× concentration, exhibited excellent color contrast and fluorescence intensity, making it the optimal choice for RPA-based visualization. Using this dye, a highly sensitive, specific, and stable AHPND visualization detection method was developed. Specificity testing demonstrated the method's ability to effectively distinguish AHPND from other major shrimp pathogens (EHP, IHHNV, and WSSV). Sensitivity analysis revealed a detection limit of 1 copies/μL, underscoring its exceptional sensitivity. Stability testing confirmed that the detection system is resistant to interference as high as 800 ng of host DNA. The method was further validated using 80 real samples, achieving an accuracy rate of 91.25%, confirming the high reliability of this visualization approach for field applications. These results provide valuable guidance for selecting suitable nucleic acid dyes and strongly support the development of more efficient, simple, and accurate diagnostic methods in aquaculture and related fields.
{"title":"Development of a recombinase polymerase amplification based rapid visual detection assay for acute hepatopancreatic necrosis disease","authors":"Junjiang Liu , Liping Wang , Xin Jia , Qinxuan Li , Lu Zhang , Mengqiang Wang","doi":"10.1016/j.aquaculture.2026.743625","DOIUrl":"10.1016/j.aquaculture.2026.743625","url":null,"abstract":"<div><div>Acute hepatopancreatic necrosis disease (AHPND), caused by <em>Vibrio parahaemolyticus</em> harboring specific virulence plasmids, results in high mortality in <em>Litopenaeus vannamei</em> and leads to substantial economic losses in shrimp farming. No effective treatments currently exist for AHPND, so the development of rapid and accurate pathogen detection methods is essential for early detection of infected individuals, allowing timely intervention to prevent large-scale outbreaks and ultimately reduce economic losses. Recombinase polymerase amplification (RPA) is an ideal on-site detection method, offering rapid results, high sensitivity, and the ability to operate at low temperatures. The RPA visualization method primarily depends on gel electrophoresis, which increases complexity and requires advanced equipment, thus limiting its field applicability. Therefore, improving the RPA visualization technique is crucial for enabling on-site detection. This study systematically assessed 14 nucleic acid dyes for visualizing RPA results. Diamond Nucleic Acid Dye, at a 1000× concentration, exhibited excellent color contrast and fluorescence intensity, making it the optimal choice for RPA-based visualization. Using this dye, a highly sensitive, specific, and stable AHPND visualization detection method was developed. Specificity testing demonstrated the method's ability to effectively distinguish AHPND from other major shrimp pathogens (EHP, IHHNV, and WSSV). Sensitivity analysis revealed a detection limit of 1 copies/μL, underscoring its exceptional sensitivity. Stability testing confirmed that the detection system is resistant to interference as high as 800 ng of host DNA. The method was further validated using 80 real samples, achieving an accuracy rate of 91.25%, confirming the high reliability of this visualization approach for field applications. These results provide valuable guidance for selecting suitable nucleic acid dyes and strongly support the development of more efficient, simple, and accurate diagnostic methods in aquaculture and related fields.</div></div>","PeriodicalId":8375,"journal":{"name":"Aquaculture","volume":"615 ","pages":"Article 743625"},"PeriodicalIF":3.9,"publicationDate":"2026-01-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145923219","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-06DOI: 10.1016/j.aquaculture.2026.743630
Pedro M. Santos , José Lino Costa , Marta Neves , Alexandra Mota , Ana Pombo
Integrated Multi-Trophic Aquaculture (IMTA) is a sustainable aquaculture approach that recycles nutrients by co-culturing species from different trophic levels. This study assessed the biological feasibility of co-culturing the sea urchin Paracentrotus lividus with the polychaete Hediste diversicolor in a novel low-trophic IMTA configuration, using sea urchin faecal waste as a food source. Three experimental sea urchin diets (D1, D2, D3), varying in marine and plant-based ingredients, were tested over 40 days, including a novel fishmeal- and fish-oil-free diet (D1). Sea urchins showed no significant differences in somatic or gonadal growth between diets. In contrast, polychaetes exhibited substantial growth across all treatments, with the highest performance observed in those fed waste from the energy-rich, animal-based diet (D3). No significant dietary effects were detected on polychaete gametogenesis, although a maturation trend aligned with energy availability. Notably, polychaetes consuming waste from the diet free of fishmeal and fish oil (D1) displayed a significantly improved fatty acid profile, particularly in eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) content. These results highlight both the influence of feed composition and the capacity of H. diversicolor to enhance the nutritional value of waste through differential assimilation and biosynthesis. By converting waste into high-value biomass, this co-culture model improves sustainability, contributes to reducing reliance on fish-oil inputs, and adds economic value to sea urchin aquaculture.
{"title":"Sea urchin and polychaete integration in IMTA as a model for sustainable waste valorisation","authors":"Pedro M. Santos , José Lino Costa , Marta Neves , Alexandra Mota , Ana Pombo","doi":"10.1016/j.aquaculture.2026.743630","DOIUrl":"10.1016/j.aquaculture.2026.743630","url":null,"abstract":"<div><div>Integrated Multi-Trophic Aquaculture (IMTA) is a sustainable aquaculture approach that recycles nutrients by co-culturing species from different trophic levels. This study assessed the biological feasibility of <em>co</em>-culturing the sea urchin <em>Paracentrotus lividus</em> with the polychaete <em>Hediste diversicolor</em> in a novel low-trophic IMTA configuration, using sea urchin faecal waste as a food source. Three experimental sea urchin diets (D1, D2, D3), varying in marine and plant-based ingredients, were tested over 40 days, including a novel fishmeal- and fish-oil-free diet (D1). Sea urchins showed no significant differences in somatic or gonadal growth between diets. In contrast, polychaetes exhibited substantial growth across all treatments, with the highest performance observed in those fed waste from the energy-rich, animal-based diet (D3). No significant dietary effects were detected on polychaete gametogenesis, although a maturation trend aligned with energy availability. Notably, polychaetes consuming waste from the diet free of fishmeal and fish oil (D1) displayed a significantly improved fatty acid profile, particularly in eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) content. These results highlight both the influence of feed composition and the capacity of <em>H. diversicolor</em> to enhance the nutritional value of waste through differential assimilation and biosynthesis. By converting waste into high-value biomass, this co-culture model improves sustainability, contributes to reducing reliance on fish-oil inputs, and adds economic value to sea urchin aquaculture.</div></div>","PeriodicalId":8375,"journal":{"name":"Aquaculture","volume":"615 ","pages":"Article 743630"},"PeriodicalIF":3.9,"publicationDate":"2026-01-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145974300","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-06DOI: 10.1016/j.aquaculture.2026.743627
Emanuel Ram , Andrew G. Jeffs , Bradley M. Skelton
Massive losses of mussel spat shortly after it is seeded onto coastal farms is a significant challenge for aquaculture. This initial study examined the potential for separating wild Greenshell™ (Perna canaliculus) mussel spat that were at high risk of being lost during seeding operations and then re-settling them onto new substrate and subsequently transferring them onto coastal mussel farms to recover spat that would be otherwise lost from production. Simply immersing the harvested wild spat material in seawater for 5 min prior to seeding onto a mussel farm resulted in the detachment of 11.2 % of the spat present in the material and enabling their recovery. A total of 82.0 % of the recovered spat could be re-settled onto cotton stocking substrate and seeded onto a coastal mussel farm, alongside the remaining harvested wild mussel spat material from which the spat had been separated. After 3.5 months, 9.5 % of the re-settled spat remained compared to 3.5 % in the originally harvested wild spat. Overall, this spat recovery process enabled more mussel spat to be retained after 3.5 months relative to the normal process for directly seeding harvested wild spat material directly onto coastal mussel farms. Further developing and applying this approach to harvested wild spat has the potential to greatly reduce overall mussel spat losses and lead to increased mussel aquaculture production.
{"title":"Recovering mussel spat normally lost during seeding onto farms","authors":"Emanuel Ram , Andrew G. Jeffs , Bradley M. Skelton","doi":"10.1016/j.aquaculture.2026.743627","DOIUrl":"10.1016/j.aquaculture.2026.743627","url":null,"abstract":"<div><div>Massive losses of mussel spat shortly after it is seeded onto coastal farms is a significant challenge for aquaculture. This initial study examined the potential for separating wild Greenshell™ (<em>Perna canaliculus</em>) mussel spat that were at high risk of being lost during seeding operations and then re-settling them onto new substrate and subsequently transferring them onto coastal mussel farms to recover spat that would be otherwise lost from production. Simply immersing the harvested wild spat material in seawater for 5 min prior to seeding onto a mussel farm resulted in the detachment of 11.2 % of the spat present in the material and enabling their recovery. A total of 82.0 % of the recovered spat could be re-settled onto cotton stocking substrate and seeded onto a coastal mussel farm, alongside the remaining harvested wild mussel spat material from which the spat had been separated. After 3.5 months, 9.5 % of the re-settled spat remained compared to 3.5 % in the originally harvested wild spat. Overall, this spat recovery process enabled more mussel spat to be retained after 3.5 months relative to the normal process for directly seeding harvested wild spat material directly onto coastal mussel farms. Further developing and applying this approach to harvested wild spat has the potential to greatly reduce overall mussel spat losses and lead to increased mussel aquaculture production.</div></div>","PeriodicalId":8375,"journal":{"name":"Aquaculture","volume":"615 ","pages":"Article 743627"},"PeriodicalIF":3.9,"publicationDate":"2026-01-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145923177","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-06DOI: 10.1016/j.aquaculture.2026.743631
Fábio Costa Filho , Indira Medina Torres , Roberta Borda Soares , D. Allen Davis , Silvio Peixoto
This study evaluated the effect of water temperature on the feeding activity of Penaeus vannamei using passive acoustic monitoring (PAM) as a noninvasive tool for real-time behavioral assessment. Juveniles (25.16 ± 1.38 g) were exposed to five temperature treatments (22.1, 24.1, 27.5, 29.4, and 31.3 °C), with four replicates per treatment, under controlled laboratory conditions. Feeding activity was monitored and quantified through acoustic detection of clicks emitted by shrimp mandibles and food consumption (FC) during 30-min feeding periods. Both click production and feed intake peaked at Regular (27.5 °C) to Very hot (31.3 °C) but declined significantly at cold temperatures of Very cold (22.1 °C) and Cold (24.1 °C). Acoustic activity correlated strongly with feed intake (r = 0.65, p < 0.001), validating PAM as a quantitative indicator of feeding intensity. Furthermore, a Generalized Least Squares (GLS) model indicated a significant time-temperature interaction, showing that temperature influenced the temporal pattern of feeding in addition to its overall magnitude. These findings confirm that ∼28–30 °C range represents the optimal thermal window for feeding activity in P. vannamei and demonstrate the potential of PAM to support precision feeding and temperature-responsive management in shrimp aquaculture.
本研究利用被动声监测(PAM)作为无创实时行为评估工具,研究了水温对凡纳滨对虾(Penaeus vannamei)摄食活动的影响。在实验室控制条件下,将幼鱼(25.16±1.38 g)暴露于5个温度处理(22.1、24.1、27.5、29.4和31.3°C)中,每个处理4个重复。通过对虾下颌骨发出的咔哒声和进食量(FC)的声学检测,监测和量化了30 min的摄食活动。click产量和采食量在常温(27.5°C)至高温(31.3°C)时达到峰值,但在低温(22.1°C)和低温(24.1°C)时显著下降。声学活动与采食量密切相关(r = 0.65, p < 0.001),证实了PAM是采食量的定量指标。此外,广义最小二乘(GLS)模型显示了显著的时间-温度相互作用,表明温度影响摄食的时间模式,除了其总体幅度。这些研究结果证实,~ 28-30°C范围是凡纳梅对虾摄食活动的最佳热窗,并证明了PAM在对虾养殖中支持精确摄食和温度响应性管理方面的潜力。
{"title":"Thermal modulation of feeding behavior in Penaeus vannamei revealed by passive acoustic monitoring","authors":"Fábio Costa Filho , Indira Medina Torres , Roberta Borda Soares , D. Allen Davis , Silvio Peixoto","doi":"10.1016/j.aquaculture.2026.743631","DOIUrl":"10.1016/j.aquaculture.2026.743631","url":null,"abstract":"<div><div>This study evaluated the effect of water temperature on the feeding activity of <em>Penaeus vannamei</em> using passive acoustic monitoring (PAM) as a noninvasive tool for real-time behavioral assessment. Juveniles (25.16 ± 1.38 g) were exposed to five temperature treatments (22.1, 24.1, 27.5, 29.4, and 31.3 °C), with four replicates per treatment, under controlled laboratory conditions. Feeding activity was monitored and quantified through acoustic detection of clicks emitted by shrimp mandibles and food consumption (FC) during 30-min feeding periods. Both click production and feed intake peaked at Regular (27.5 °C) to Very hot (31.3 °C) but declined significantly at cold temperatures of Very cold (22.1 °C) and Cold (24.1 °C). Acoustic activity correlated strongly with feed intake (<em>r</em> = 0.65, <em>p</em> < 0.001), validating PAM as a quantitative indicator of feeding intensity. Furthermore, a Generalized Least Squares (GLS) model indicated a significant time-temperature interaction, showing that temperature influenced the temporal pattern of feeding in addition to its overall magnitude. These findings confirm that ∼28–30 °C range represents the optimal thermal window for feeding activity in <em>P. vannamei</em> and demonstrate the potential of PAM to support precision feeding and temperature-responsive management in shrimp aquaculture.</div></div>","PeriodicalId":8375,"journal":{"name":"Aquaculture","volume":"615 ","pages":"Article 743631"},"PeriodicalIF":3.9,"publicationDate":"2026-01-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145923211","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-06DOI: 10.1016/j.aquaculture.2026.743628
Jia-Le He, Han-Yin Xu, Yu-Long Sun, Tao Han, Jian-Kun Zhang, Qiang Chen, Ji-Teng Wang
This study evaluated the influence of dietary reuterin on the growth performance, antioxidant capacity, and immune metabolism of largemouth bass (Micropterus salmoides), with a further objective of unraveling the key molecular pathways responsible for these physiological alterations. A seven-week feeding trial was conducted on largemouth bass (initial weight 3.07 ± 0.02 g) to assess the effects of dietary reuterin. The fish were reared on one of six isonitrogenous and isolipidic diets containing incremental levels of reuterin (0, 0.01, 0.02, 0.04, 0.08, and 0.16 g/kg), which ultimately led to significant enhancements in both weight gain rate (WGR) and specific growth rate (SGR). Based on a quadratic regression analysis of WGR and SGR, the optimal dietary supplementation level of reuterin was determined to be 0.09 g/kg. Fish fed reuterin exhibited enhanced liver antioxidant capacity, evidenced by increased activities of total antioxidant capacity (T-AOC), superoxide dismutase (SOD), and catalase (CAT), and a significant reduction in malondialdehyde (MDA) content. At the transcriptional level, reuterin supplementation actively promoted the expression of genes associated with antioxidant defense and glutathione synthesis, such as nrf2, sod1, cat, gpx, gss, and gst. Conversely, it suppressed the transcription of key pro-inflammatory cytokines (tnf-α, il-1β, il-8) and mediators of apoptosis (casp8, casp9, bax). A combined investigation of the liver transcriptome and metabolome revealed that reuterin substantially alters pivotal metabolic pathways. The primary routes affected by this remodeling included the metabolism of glutathione, arginine and proline, and arachidonic acid. These changes suggest that reuterin enhances the antioxidant defense system, at least in part, by activating the nrf2 signaling pathway and promoting the glutathione metabolic cycle, which in turn mitigates inflammatory responses. In conclusion, dietary reuterin supplementation can effectively promote growth and enhance the antioxidant and immune functions of largemouth bass, highlighting its potential as a beneficial feed additive in aquaculture.
{"title":"Dietary reuterin as a potential feed additive enhances growth performance, antioxidant capacity, and anti-inflammatory response in largemouth bass: Multi-omics insights into metabolic reprogramming","authors":"Jia-Le He, Han-Yin Xu, Yu-Long Sun, Tao Han, Jian-Kun Zhang, Qiang Chen, Ji-Teng Wang","doi":"10.1016/j.aquaculture.2026.743628","DOIUrl":"10.1016/j.aquaculture.2026.743628","url":null,"abstract":"<div><div>This study evaluated the influence of dietary reuterin on the growth performance, antioxidant capacity, and immune metabolism of largemouth bass (<em>Micropterus salmoides</em>), with a further objective of unraveling the key molecular pathways responsible for these physiological alterations. A seven-week feeding trial was conducted on largemouth bass (initial weight 3.07 ± 0.02 g) to assess the effects of dietary reuterin. The fish were reared on one of six isonitrogenous and isolipidic diets containing incremental levels of reuterin (0, 0.01, 0.02, 0.04, 0.08, and 0.16 g/kg), which ultimately led to significant enhancements in both weight gain rate (WGR) and specific growth rate (SGR). Based on a quadratic regression analysis of WGR and SGR, the optimal dietary supplementation level of reuterin was determined to be 0.09 g/kg. Fish fed reuterin exhibited enhanced liver antioxidant capacity, evidenced by increased activities of total antioxidant capacity (T-AOC), superoxide dismutase (SOD), and catalase (CAT), and a significant reduction in malondialdehyde (MDA) content. At the transcriptional level, reuterin supplementation actively promoted the expression of genes associated with antioxidant defense and glutathione synthesis, such as <em>nrf2</em>, <em>sod1</em>, <em>cat</em>, <em>gpx</em>, <em>gss</em>, and <em>gst</em>. Conversely, it suppressed the transcription of key pro-inflammatory cytokines (<em>tnf-α</em>, <em>il-1β</em>, <em>il-8</em>) and mediators of apoptosis (<em>casp8</em>, <em>casp9</em>, <em>bax</em>). A combined investigation of the liver transcriptome and metabolome revealed that reuterin substantially alters pivotal metabolic pathways. The primary routes affected by this remodeling included the metabolism of glutathione, arginine and proline, and arachidonic acid. These changes suggest that reuterin enhances the antioxidant defense system, at least in part, by activating the <em>nrf2</em> signaling pathway and promoting the glutathione metabolic cycle, which in turn mitigates inflammatory responses. In conclusion, dietary reuterin supplementation can effectively promote growth and enhance the antioxidant and immune functions of largemouth bass, highlighting its potential as a beneficial feed additive in aquaculture.</div></div>","PeriodicalId":8375,"journal":{"name":"Aquaculture","volume":"615 ","pages":"Article 743628"},"PeriodicalIF":3.9,"publicationDate":"2026-01-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145923287","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-05DOI: 10.1016/j.aquaculture.2026.743624
Muhammad Safdar , Safdar Imran , Hafiz Ishfaq Ahmad , Mehmet Ozaslan , Xia Wang , Xiuli Chen
The whiteleg shrimp (Penaeus vannamei), a cornerstone of global aquaculture with annual production exceeding 5.8 million tons (FAO, 2022), confronts significant challenges from oxidative stress, which undermines health, growth, and reproductive success. β-1,3-Glucan-binding protein (β-GBP), a pivotal pattern recognition receptor, orchestrates innate immune defense and regulates oxidative stress, establishing it as a prime target for enhancing stress resilience. This review primarily focuses on genomic mechanisms of β-GBP regulation and the translational potential of polyphenol-based interventions in P. vannamei aquaculture. Polyphenols, a diverse class of natural compounds with potent antioxidant and immunomodulatory properties, enhance β-GBP functionality, neutralize ROS, and elevate production metrics, with several controlled trials reporting survival and yield improvements typically in the range of 15–30 %. We present cutting-edge molecular insights into β-GBP regulation, harnessing advanced methodologies including RNA sequencing, CRISPR-Cas9 gene editing, proteomics, single-cell transcriptomics, and integrative multi-omics to unravel its molecular mechanisms. Polyphenol-based interventions amplify β-GBP–mediated immunity, mitigate oxidative damage, and promote sustainable aquaculture practices. Although nano-delivery systems, AI-optimized formulations, and synergistic probiotic–polyphenol combinations show considerable theoretical promise, these approaches remain conceptual and require extensive experimental validation.
{"title":"Molecular and functional insights of β-1,3-glucan-binding protein (β-GBP) in polyphenol-based oxidative stress mitigation in whiteleg shrimp (Penaeus vannamei)","authors":"Muhammad Safdar , Safdar Imran , Hafiz Ishfaq Ahmad , Mehmet Ozaslan , Xia Wang , Xiuli Chen","doi":"10.1016/j.aquaculture.2026.743624","DOIUrl":"10.1016/j.aquaculture.2026.743624","url":null,"abstract":"<div><div>The whiteleg shrimp (<em>Penaeus vannamei</em>), a cornerstone of global aquaculture with annual production exceeding 5.8 million tons (FAO, 2022), confronts significant challenges from oxidative stress, which undermines health, growth, and reproductive success. β-1,3-Glucan-binding protein (β-GBP), a pivotal pattern recognition receptor, orchestrates innate immune defense and regulates oxidative stress, establishing it as a prime target for enhancing stress resilience. This review primarily focuses on genomic mechanisms of β-GBP regulation and the translational potential of polyphenol-based interventions in <em>P. vannamei</em> aquaculture. Polyphenols, a diverse class of natural compounds with potent antioxidant and immunomodulatory properties, enhance β-GBP functionality, neutralize ROS, and elevate production metrics, with several controlled trials reporting survival and yield improvements typically in the range of 15–30 %. We present cutting-edge molecular insights into β-GBP regulation, harnessing advanced methodologies including RNA sequencing, CRISPR-Cas9 gene editing, proteomics, single-cell transcriptomics, and integrative multi-omics to unravel its molecular mechanisms. Polyphenol-based interventions amplify β-GBP–mediated immunity, mitigate oxidative damage, and promote sustainable aquaculture practices. Although nano-delivery systems, AI-optimized formulations, and synergistic probiotic–polyphenol combinations show considerable theoretical promise, these approaches remain conceptual and require extensive experimental validation.</div></div>","PeriodicalId":8375,"journal":{"name":"Aquaculture","volume":"615 ","pages":"Article 743624"},"PeriodicalIF":3.9,"publicationDate":"2026-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145923217","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The Chinese mitten crab, Eriocheir sinensis, is a commercially important aquaculture species widely cultivated across Asia. However, intensive aquaculture practices often lead to elevated ammonia concentrations, a significant environmental stressor known to negatively impact aquatic organisms, in rearing water. While previous studies have investigated the general effects of ammonia on crab physiology, a detailed, quantitative analysis of its impact on complex social behaviors remains unexplored. Thus, this study aimed to utilize DeepLabCut (DLC), a machine learning-based toolbox, to quantify the behaviors of male E. sinensis. In addition, the behavioral performance of this animal after exposure to ammonia at 5 and 10 mg/L for 14 days was also analyzed to evaluate the performance of DLC. The positions of seven essential body parts (pincers, legs, rostrum, carapace, and abdomen) in every frame were tracked by DLC, and based on the generated x and y coordinates, several important behavior endpoints were calculated. Based on the results, DLC with the ResNet-152 framework performed well in reducing loss and errors during training, enabling the output model to detect and track the desired body parts of crabs most of the time. Furthermore, the results also demonstrated statistically significant alterations in the locomotion and agonistic behaviors of ammonia-exposed crabs as indicated by the increase in their locomotor activity, fighting, and chasing behaviors. To sum up, this study highlighted the detrimental impact of sub-lethal ammonia levels on the complex fighting behaviors of E. sinensis, potentially affecting their competitive abilities and social hierarchies within a confined environment. Furthermore, the current findings also signify the utility of DLC as a robust, high-throughput, and unbiased tool for dissecting subtle behavioral changes in aquatic organisms, offering a powerful alternative to traditional and labor-intensive manual scoring methods. We believe that the current findings provide valuable insights for sustainable aquaculture practices by emphasizing the critical need for stringent water quality management to maintain animal welfare and productivity.
{"title":"A DeepLabCut-based method to study fighting behavior alterations in Chinese mitten crab (Eriocheir sinensis) exposed to different Ammonia levels","authors":"Yunfei Sun , Qin Wu , Gilbert Audira , Nitiphong Kaewman , Chung-Der Hsiao","doi":"10.1016/j.aquaculture.2026.743623","DOIUrl":"10.1016/j.aquaculture.2026.743623","url":null,"abstract":"<div><div>The Chinese mitten crab, <em>Eriocheir sinensis</em>, is a commercially important aquaculture species widely cultivated across Asia. However, intensive aquaculture practices often lead to elevated ammonia concentrations, a significant environmental stressor known to negatively impact aquatic organisms, in rearing water. While previous studies have investigated the general effects of ammonia on crab physiology, a detailed, quantitative analysis of its impact on complex social behaviors remains unexplored. Thus, this study aimed to utilize DeepLabCut (DLC), a machine learning-based toolbox, to quantify the behaviors of male <em>E. sinensis</em>. In addition, the behavioral performance of this animal after exposure to ammonia at 5 and 10 mg/L for 14 days was also analyzed to evaluate the performance of DLC. The positions of seven essential body parts (pincers, legs, rostrum, carapace, and abdomen) in every frame were tracked by DLC, and based on the generated x and y coordinates, several important behavior endpoints were calculated. Based on the results, DLC with the ResNet-152 framework performed well in reducing loss and errors during training, enabling the output model to detect and track the desired body parts of crabs most of the time. Furthermore, the results also demonstrated statistically significant alterations in the locomotion and agonistic behaviors of ammonia-exposed crabs as indicated by the increase in their locomotor activity, fighting, and chasing behaviors. To sum up, this study highlighted the detrimental impact of sub-lethal ammonia levels on the complex fighting behaviors of <em>E. sinensis</em>, potentially affecting their competitive abilities and social hierarchies within a confined environment. Furthermore, the current findings also signify the utility of DLC as a robust, high-throughput, and unbiased tool for dissecting subtle behavioral changes in aquatic organisms, offering a powerful alternative to traditional and labor-intensive manual scoring methods. We believe that the current findings provide valuable insights for sustainable aquaculture practices by emphasizing the critical need for stringent water quality management to maintain animal welfare and productivity.</div></div>","PeriodicalId":8375,"journal":{"name":"Aquaculture","volume":"615 ","pages":"Article 743623"},"PeriodicalIF":3.9,"publicationDate":"2026-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145923215","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-05DOI: 10.1016/j.aquaculture.2025.743616
Longfei Chu , Jiaxi Chang , Junhao Zhang , Ancheng Liu , Jian Liu , Guobo Chen , Xiaoting Huang , Liangmin Yu , Qiang Xing , Zhenmin Bao
The larval attachment and metamorphosis stages are pivotal yet challenging phases in hatchery production of the Yesso scallop (Patinopecten yessoensis). Conventional methods to facilitate these processes are frequently labor-intensive and environmentally concerning, highlighting the need to evaluate the application value of newly developed materials in scallop aquaculture. In this study, we introduced an innovative approach utilizing plasma-treated polyethylene (PE) meshes as settlement substrates, where treatment with argon (Ar), nitrogen (N₂), and air (Air) plasma was applied for varying durations (1, 2, and 4 min). The gas flow rate was maintained at 50 standard cubic centimeters per minute, with the vacuum pressure controlled at 30–35 Pa. Our findings demonstrated that gas plasma treatment significantly enhanced larval attachment across all treatments, and increased metamorphosis rates in the N₂ plasma treatment groups. Attachment (143.77–161.13 %) and metamorphosis (10.85–16.68 %) rates increased in the N₂ plasma treatment when compared to untreated controls. Furthermore, plasma-treated groups exhibited superior spat retention, with the highest values observed in N₂-treated specimens. Crucially, this enhancement in settlement occurred without compromising larval growth or survival throughout the attachment, metamorphosis, and spat retention phases. Overall, this study establishes plasma-treated PE meshes as an effective, sustainable solution for improving scallop larval settlement, offering significant potential for application in large-scale sustainable aquaculture operations.
{"title":"Gas plasma-treated polyethylene meshes enhance larval settlement in Yesso scallop (Patinopecten yessoensis) hatchery production","authors":"Longfei Chu , Jiaxi Chang , Junhao Zhang , Ancheng Liu , Jian Liu , Guobo Chen , Xiaoting Huang , Liangmin Yu , Qiang Xing , Zhenmin Bao","doi":"10.1016/j.aquaculture.2025.743616","DOIUrl":"10.1016/j.aquaculture.2025.743616","url":null,"abstract":"<div><div>The larval attachment and metamorphosis stages are pivotal yet challenging phases in hatchery production of the Yesso scallop (<em>Patinopecten yessoensis</em>). Conventional methods to facilitate these processes are frequently labor-intensive and environmentally concerning, highlighting the need to evaluate the application value of newly developed materials in scallop aquaculture. In this study, we introduced an innovative approach utilizing plasma-treated polyethylene (PE) meshes as settlement substrates, where treatment with argon (Ar), nitrogen (N₂), and air (Air) plasma was applied for varying durations (1, 2, and 4 min). The gas flow rate was maintained at 50 standard cubic centimeters per minute, with the vacuum pressure controlled at 30–35 Pa. Our findings demonstrated that gas plasma treatment significantly enhanced larval attachment across all treatments, and increased metamorphosis rates in the N₂ plasma treatment groups. Attachment (143.77–161.13 %) and metamorphosis (10.85–16.68 %) rates increased in the N₂ plasma treatment when compared to untreated controls. Furthermore, plasma-treated groups exhibited superior spat retention, with the highest values observed in N₂-treated specimens. Crucially, this enhancement in settlement occurred without compromising larval growth or survival throughout the attachment, metamorphosis, and spat retention phases. Overall, this study establishes plasma-treated PE meshes as an effective, sustainable solution for improving scallop larval settlement, offering significant potential for application in large-scale sustainable aquaculture operations.</div></div>","PeriodicalId":8375,"journal":{"name":"Aquaculture","volume":"615 ","pages":"Article 743616"},"PeriodicalIF":3.9,"publicationDate":"2026-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145923220","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-01-05DOI: 10.1016/j.aquaculture.2026.743621
Sijian Deng , Yuhe Yang , Tingting Lin , Xin Liu , Yazhou Jiang , Zhengli Fang , Siping Li
Swimming performance is a critical locomotor trait that directly influences fish survival and reproductive success, playing an increasingly recognized role in the conservation and recovery of wild fish populations. Although exercise training can enhance swimming performance through both muscular aerobic and anaerobic metabolic phenotypes, the specific effects and underlying mechanisms remain poorly understood in the large yellow croaker (Larimichthys crocea). Herein, we subjected 5 cm juvenile large yellow croaker to exercise training at intensities of 0, 1, 2, and 4 BL/s for 6 h per day over 30 d, and evaluated both critical swimming speed (Ucrit) and constant acceleration speed (Ucat). Behavioral results showed that training at 4 BL/s significantly improved Ucrit and Ucat, with increases of 34.65 % and 24.66 %, respectively. Physiological analysis indicated that all exercise groups exhibited a significant increase in lactate dehydrogenase (LDH) activity and a significant decrease in 5-hydroxytryptamine (5-HT) concentration. In contrast, superoxide dismutase (SOD) activity significantly declined only in 2 BL/s, and cytochrome c oxidase (COX) concentration remained unchanged across all groups. Non-targeted metabolomics identified 143 significantly altered metabolites, primarily enriched in pathways including “glycerolipid metabolism”, “glycine, serine and threonine metabolism”, “choline metabolism in cancer”, “lysine degradation”, and “nucleotide metabolism”. Integrated transcriptomic and metabolomic analysis revealed that exercise training enhanced muscular metabolic phenotype by modulating key metabolites such as palmitoylcarnitine, glycerol-3-phosphate, allysine, guanosine, hypoxanthine, and glycerophosphocholine. These changes facilitated more efficient substrate utilization, optimized energy allocation, and improved antioxidant capacity, collectively contributing to the remodeling of muscular and behavioral performance. This study demonstrates that exercise training can effectively promote behavioral fitness in stock-enhanced fish species and provides insights into the metabolic basis underlying these improvements.
{"title":"Improved swimming performance from exercise training is driven by optimized muscle energy metabolism and antioxidant capacity in juvenile large yellow croaker Larimichthys crocea","authors":"Sijian Deng , Yuhe Yang , Tingting Lin , Xin Liu , Yazhou Jiang , Zhengli Fang , Siping Li","doi":"10.1016/j.aquaculture.2026.743621","DOIUrl":"10.1016/j.aquaculture.2026.743621","url":null,"abstract":"<div><div>Swimming performance is a critical locomotor trait that directly influences fish survival and reproductive success, playing an increasingly recognized role in the conservation and recovery of wild fish populations. Although exercise training can enhance swimming performance through both muscular aerobic and anaerobic metabolic phenotypes, the specific effects and underlying mechanisms remain poorly understood in the large yellow croaker (<em>Larimichthys crocea</em>). Herein, we subjected 5 cm juvenile large yellow croaker to exercise training at intensities of 0, 1, 2, and 4 BL/s for 6 h per day over 30 d, and evaluated both critical swimming speed (<em>U</em><sub>crit</sub>) and constant acceleration speed (<em>U</em><sub>cat)</sub>. Behavioral results showed that training at 4 BL/s significantly improved <em>U</em><sub>crit</sub> and <em>U</em><sub>cat</sub>, with increases of 34.65 % and 24.66 %, respectively. Physiological analysis indicated that all exercise groups exhibited a significant increase in lactate dehydrogenase (LDH) activity and a significant decrease in 5-hydroxytryptamine (5-HT) concentration. In contrast, superoxide dismutase (SOD) activity significantly declined only in 2 BL/s, and cytochrome <em>c</em> oxidase (COX) concentration remained unchanged across all groups. Non-targeted metabolomics identified 143 significantly altered metabolites, primarily enriched in pathways including “glycerolipid metabolism”, “glycine, serine and threonine metabolism”, “choline metabolism in cancer”, “lysine degradation”, and “nucleotide metabolism”. Integrated transcriptomic and metabolomic analysis revealed that exercise training enhanced muscular metabolic phenotype by modulating key metabolites such as palmitoylcarnitine, glycerol-3-phosphate, allysine, guanosine, hypoxanthine, and glycerophosphocholine. These changes facilitated more efficient substrate utilization, optimized energy allocation, and improved antioxidant capacity, collectively contributing to the remodeling of muscular and behavioral performance. This study demonstrates that exercise training can effectively promote behavioral fitness in stock-enhanced fish species and provides insights into the metabolic basis underlying these improvements.</div></div>","PeriodicalId":8375,"journal":{"name":"Aquaculture","volume":"615 ","pages":"Article 743621"},"PeriodicalIF":3.9,"publicationDate":"2026-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145923286","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}