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Acoustic scattering properties of a seagrass, Cymodocea nodosa: in-situ measurements 海草Cymodocea nodosa的声散射特性:原位测量
4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-10-30 DOI: 10.1515/bot-2022-0083
Erhan Mutlu, Cansu Olguner
Abstract Marine prairies play various crucial roles in marine ecosystems. The seagrasses that compose them are one of the most important components engineering the marine coastal system, providing significant spatial niches. Some of the seagrasses found in marine prairies are protected, and it is not recommended to sample them with destructive methods. Non-destructive methods such as remote sensing have been proposed as important means of studying these protected species. In the present study, the acoustic scattering properties of Cymodocea nodosa were studied with two different in / ex situ experiments conducted on a Turkish Mediterranean coast using a scientific echosounder (206 kHz split beam transducer) in different months over the years 2011 and 2012. After a series of acoustic processes, correlations and regression equations were established between different acoustic parameters of the Elementary Distance Sampling Units and biometric traits of below/above ground parts of the seagrass. The relationships were logarithmically established producing first a Rayleigh zone, followed by a geometrical zone that occurred with increased biometrics. No seasonal difference occurred in the relationships for the above-ground parts. Unlike the leaves, seagrass sheaths demonstrated unstable echo energy, inconsistent relationships, and unexplained acoustic responses over the span of several months. Regarding leaf density changing in time, significant relationships were explained as a function of the acoustic zones. Four points were highlighted to explain the differences in the estimations between the two experiments; i) the backscattering strengths depended on strength of biomass and its fractions (leaf area, shoot density and volume) between the two experiments, ii) the first experiment measured backscattering strength from individual specimens, but the second experiment was performed on the total biomass of seagrass per unit area, iii) different frequency response to the biometrics occurred in the two experiments, and iv) the non-linear effect of the sheath could not be separated from that of the leaf during the second experiment. The present study was the first attempt to characterize relationships between the biometric and acoustic backscattering properties of C. nodosa , and will guide researchers in future use of non-destructive methods.
海洋草原在海洋生态系统中发挥着各种重要作用。构成它们的海草是海洋海岸系统最重要的组成部分之一,提供了重要的空间生态位。在海洋草原上发现的一些海草是受保护的,不建议用破坏性的方法对它们进行取样。遥感等非破坏性方法被认为是研究这些受保护物种的重要手段。本研究在2011年和2012年的不同月份,利用科学回声测深仪(206 kHz分束换能器)在土耳其地中海沿岸进行了两次不同的原位/非原位实验,研究了Cymodocea nodosa的声散射特性。通过一系列声学处理,建立了基本距离采样单元不同声学参数与海草地上、地下部分生物特征之间的相关关系和回归方程。这种关系是对数建立的,首先产生一个瑞利区,然后是一个几何区,随着生物特征的增加而发生。地上部分的关系不存在季节差异。与树叶不同,海草鞘在几个月内表现出不稳定的回声能量,不一致的关系和无法解释的声学响应。叶片密度随时间的变化与声区有显著的关系。强调了四点来解释两个实验之间估计的差异;1)后向散射强度取决于两个实验之间生物量及其组分(叶面积、茎密度和体积)的强度;2)第一个实验测量的是单个样品的后向散射强度,而第二个实验测量的是单位面积海草的总生物量;3)两个实验对生物特征的频率响应不同。iv)在第二次实验中,叶鞘的非线性效应无法与叶片的非线性效应分离。本研究是第一次尝试表征紫杉树的生物特征和声学后向散射特性之间的关系,并将指导研究人员在未来使用非破坏性方法。
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引用次数: 0
High-temperature stress induces bacteria-specific adverse and reversible effects on Ulva (Chlorophyta) growth and its chemosphere in a reductionist model system 在还原论模型系统中,高温胁迫诱导了细菌特异性的对绿藻生长及其化学圈的不利和可逆影响
4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-10-27 DOI: 10.1515/bot-2023-0053
Imen Hmani, Fatemeh Ghaderiardakani, Leila Ktari, Monia El Bour, Thomas Wichard
Abstract Axenic cultures of the green seaweed Ulva mutabilis were inoculated with bacteria providing essential algal growth and morphogenesis-promoting factors (AGMPFs) and were exposed to temperature shifts from 18 °C to 30 °C. The temperature-dependent effect of bacteria on longitudinal algal growth and the molecular composition of the chemosphere in the algal culture medium was explored. The reductionist tripartite model system of U. mutabilis , Roseovarius sp. MS2, and Maribacter sp. MS6 was applied as a reference and has been changed by substituting Roseovarius with isolates that phenocopy this strain. Rathayibacter festucae IH2 and Roseovarius aestuarii G8 boosted growth at 18 °C but slowed it down at 30 °C. Additional inoculation of Roseovarius sp. MS2 mitigated these adverse bacterial effects partially. At 30 °C, the molecular profile of the chemosphere differed dramatically between all tested tripartite communities, indicating different traits of the same bacterium with changing temperatures. Functional examinations should, therefore, accompany microbiome analysis to detect changing traits with the same microbiome composition.
摘要:用提供必需藻类生长和形态发生促进因子(AGMPFs)的细菌接种绿海藻(Ulva mutabilis)的无菌培养物,并将其暴露在18°C至30°C的温度变化中。探讨了细菌对藻类纵向生长的温度依赖性以及藻类培养基中化学层分子组成的影响。本文以变异U., Roseovarius sp. MS2和Maribacter sp. MS6的还原主义三元模型系统为参考,并将Roseovarius替换为复制该菌株的分离株。猪链球菌IH2和猪链球菌(Roseovarius aestuarii G8)在18°C时促进生长,但在30°C时减慢生长。额外接种玫瑰曲霉菌MS2部分减轻了这些不利的细菌影响。在30°C时,所有测试的三方群落的化学层分子谱差异显著,表明同一细菌在不同温度下具有不同的特性。因此,功能检查应伴随微生物组分析,以检测具有相同微生物组组成的变化特征。
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引用次数: 1
Record of the unarmored dinoflagellate Gynogonadinium aequatoriale (Ceratoperidiniaceae, Dinophyceae) in the Mediterranean Sea 地中海无甲甲藻Gynogonadinium aequatoriale (Ceratoperidiniaceae, Dinophyceae)的记录
4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-10-26 DOI: 10.1515/bot-2023-0054
Fernando Gómez
Abstract The records of the unarmored dinoflagellate Gynogonadinium aequatoriale have been restricted to the western equatorial and the eastern tropical Pacific Ocean. The genus is reported for the first time in the Mediterranean Sea from the coast of Taranto, Ionian Sea. This is a distinctive taxon that can only be confused with the cosmopolitan Pseliodinium fusus (= Ceratoperidinium falcatum ). A comparison of these two species is provided.
摘要无甲甲藻Gynogonadinium aequatoriale的记录仅限于赤道西部和热带太平洋东部。该属首次在地中海报道,分布于爱奥尼亚海塔兰托沿岸。这是一个独特的分类群,只能与世界性的Pseliodinium fusus (= Ceratoperidinium falcatum)混淆。本文提供了这两个物种的比较。
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引用次数: 0
Frontmatter 头版头条
4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-10-01 DOI: 10.1515/bot-2023-frontmatter5
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引用次数: 0
Differences between the wild-type and cultivated Gracilariopsis lemaneiformis revealed by quantitative proteome and gene expression profiling analysis 通过定量蛋白质组学和基因表达谱分析揭示了野生型和栽培型薄叶茅的差异
4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-10-01 DOI: 10.1515/bot-2023-0012
Xiao Ying, Wenkang Chen, Qionglin Chen, Xiaoqian Zhang, Nianjun Xu, Xue Sun
Abstract The seaweed Gracilariopsis lemaneiformis is widely cultivated in the southern and northern coasts of China, and is mainly used for agar extraction and abalone feed. The cultivated strain of G. lemaneiformis 981 has various advantages over the wild type such as growth rate and high-temperature tolerance. Therefore, it is necessary to investigate the differences between the wild-type and cultivated G. lemaneiformis . Here, 648 up-regulated and 837 down-regulated proteins were screened using the isobaric tags for relative and absolute quantitation (iTRAQ) technique, and these differentially expressed proteins (DEPs) were concentrated in the pathways including “Ribosome”, “Photosynthesis-antenna proteins”, “alpha-Linolenic acid metabolism”, and “Phenylpropanoid biosynthesis”. The most prominent pathway was “Ribosome”, namely, 116 out of 119 ribosome-associated proteins were up-regulated in G. lemaneiformis 981 compared to the wild type. Subsequently, multiple reaction monitoring (MRM) validated the credibility of the iTRAQ results. Finally, “Phenylpropanoid biosynthesis” and “Photosynthesis-antenna proteins” pathways were also found to be significantly changed in G. lemaneiformis 981 validated by gene expression profiling analysis. Altogether, these results, in combination with chlorophyll fluorescence parameters, unveiled the possible mechanism of differences in growth and anti-abiotic stresses between the wild-type and cultivated G. lemaneiformis , which would provide a reference for breeding of excellent seaweeds.
摘要:细叶草(Gracilariopsis lemaneiformis)是中国南北海岸广泛种植的海藻,主要用于琼脂提取和鲍鱼饲料。lemaneiformis 981栽培菌株在生长速度和耐高温性等方面优于野生型。因此,有必要对野生型与栽培型的差异进行研究。本研究采用等压标签相对绝对定量(iTRAQ)技术,筛选了648个上调蛋白和837个下调蛋白,这些差异表达蛋白(DEPs)集中在“核糖体”、“光合天线蛋白”、“α -亚麻酸代谢”和“苯基丙烷类生物合成”等途径中。最突出的途径是“核糖体”,即与野生型相比,G. lemaneiformis 981中119个核糖体相关蛋白中有116个上调。随后,多重反应监测(MRM)验证了iTRAQ结果的可信度。最后,通过基因表达谱分析,发现G. lemaneiformis 981的“苯丙类生物合成”和“光合作用-天线蛋白”途径也发生了显著变化。综上所述,这些结果结合叶绿素荧光参数,揭示了野生型和栽培型lemaneiformis在生长和抗非生物胁迫方面差异的可能机制,为优质海藻的选育提供参考。
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引用次数: 0
History of marine mycology – a personal perspective 海洋真菌学的历史——个人视角
4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-10-01 DOI: 10.1515/bot-2023-0017
E. B. Gareth Jones
Abstract This article is a personal impression of the key scientists who contributed to the study of marine mycology over past 174 years, especially those the author met during his career studying this unique group of fungi. Marine mycology has been a journey of discovery from a few species to nearly 2000 taxa in nine fungal phyla. Techniques for their study have advanced from morphological observations, to the use of scanning and transmission electron microscopy, to the development of high-throughput sequencing technology and the unravelling of the genomes of selected species. Thoughts on the conservation of marine fungi, their adaptation to climate change and potential role in the decomposition of plastics are briefly considered.
本文是作者对174年来在海洋真菌学研究中做出贡献的主要科学家的个人印象,特别是作者在研究这一独特真菌群的职业生涯中遇到的那些科学家。海洋真菌学是一个从几个物种到9个真菌门近2000个分类群的发现之旅。它们的研究技术已经从形态学观察发展到扫描和透射电子显微镜的使用,再到高通量测序技术的发展和选定物种基因组的揭示。简要讨论了海洋真菌的保护、对气候变化的适应以及在塑料分解中的潜在作用。
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引用次数: 0
Ecophysiology of Kuwaiti macroalgae with special emphasis on temperature and salinity tolerance related to the conditions at desalination plant outfalls 科威特大型藻类的生态生理学,特别强调与海水淡化厂出口条件有关的温度和盐度耐受性
4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-10-01 DOI: 10.1515/bot-2022-0049
Amal H. Hajiya Hasan, Dhia A. Al-Bader, Steve Woodward, Akira F. Peters, Frithjof C. Küpper
Abstract Brine discharged from seawater desalination plants impacts marine life by exposure to increased salinity and, in some cases, temperature. However, the responses of individual species to such stress remains poorly known yet their understanding is essential for assessing and predicting the impacts of seawater desalination plants. In this study, unialgal cultures obtained by the germling emergence method of 34 taxa representative of the Rhodophyta, Chlorophyta and Phaeophyceae seaweeds in the Arabian Gulf, and isolated from the vicinity of two large desalination plants in Kuwait, were subjected to increased temperature and salinity under experimental conditions in the laboratory. The dataset is complemented by measurements of seawater temperature and salinity obtained at increasing distances from the outfalls of desalination plants and along the Kuwaiti coastline including from two pristine areas, Boubiyan and Fintas. Chlorophyta, especially Ulva spp., and Phaeophyceae displayed remarkable tolerance against hypersaline and thermal stress, suggesting that this group can cope better with adverse environmental conditions. Members of the Rhodophyta were considerably more sensitive to temperature increases.
海水淡化厂排放的盐水会增加海水的盐度,在某些情况下还会增加温度,从而影响海洋生物。然而,个别物种对这种压力的反应仍然知之甚少,但它们的理解对于评估和预测海水淡化厂的影响至关重要。在本研究中,在实验室的实验条件下,对科威特两个大型海水淡化厂附近分离的阿拉伯湾红藻、绿藻和褐藻的34个分类群进行了单藻培养,采用胚出法获得单藻培养物。该数据集还得到了海水温度和盐度测量值的补充,这些测量值是在距离海水淡化厂出口越来越远的地方和科威特海岸线上获得的,包括两个原始地区,Boubiyan和Fintas。绿藻类,尤其是绿藻类和褐藻类对高盐胁迫和热胁迫表现出较强的耐受性,表明绿藻类能更好地应对恶劣的环境条件。红藻门的成员对温度升高相当敏感。
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引用次数: 0
Stable isotope values (δ 13C, δ 15N) of macroalgal communities at Loch Creran and its relevance for elucidating sources of macroalgal organic carbon in fjordic sedimentary systems crean湖大藻群落δ 13C、δ 15N稳定同位素值及其与峡湾沉积体系大藻有机碳来源的相关性
4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-10-01 DOI: 10.1515/bot-2023-0035
Alexander Bebb, Imogen Hawkins, Richard Gwynne-Jones, Ruth Helmore, Ursula Witte
Abstract Here, macroalgal isotopic values from Loch Creran, Western Scotland, were documented to determine the suitability of paired stable isotope analysis for identifying macroalgal-derived organic carbon sources in a fjordic sea loch. Variability in isotopic values ( δ 13 C and δ 15 N) was evident within individual thalli of fucoid and kelp species, at the replicate level and between sampling localities. There were few consistent phylogenetic correlates in the isotopic values of macroalgae. The δ 13 C ranges did, however, provide insight into differentiating between carbon sources more broadly, such as terrestrial from marine and between macrophyte lineages. As such, δ 13 C could be indicative of the presence of macroalgal carbon sources within pools of organic matter but will likely be ineffective at separating these sources to lower taxonomic levels. Consequently, if these data are used alone to discriminate between macroalgal carbon sources and their relative contribution to a sedimentary pool of organic matter, the development of accurate conclusions will be challenging. The findings presented here demonstrate the need for complementary techniques or multi-tracer approaches to aid in the differentiation between macroalgal carbon sources to lower taxonomic levels rather than relying on stable isotopes as a biomarker alone.
本文记录了苏格兰西部克雷兰湖(Loch Creran)大藻的同位素值,以确定配对稳定同位素分析在确定峡湾海湖中大藻衍生有机碳源中的适用性。岩藻和海带的同位素值(δ 13c和δ 15n)在重复水平和采样地点之间的个体菌体内具有明显的差异。在大型藻类的同位素值中,几乎没有一致的系统发育相关性。然而,δ 13c范围确实提供了更广泛的区分碳源的见解,例如陆地和海洋以及大型植物谱系之间的区别。因此,δ 13c可能表明有机物池中存在大藻碳源,但可能无法将这些碳源分离到较低的分类水平。因此,如果仅使用这些数据来区分大藻碳源及其对沉积池有机质的相对贡献,则很难得出准确的结论。本文提出的研究结果表明,需要补充技术或多示踪剂方法来帮助区分大藻碳源到较低的分类水平,而不是仅仅依靠稳定同位素作为生物标志物。
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引用次数: 0
Diversity of marine fungi in Pondicherry mangroves, east coast of India and systematic placement of Rhizophila marina 印度东海岸本地樱桃红树林中海洋真菌的多样性及嗜根菌的系统安置
4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-09-13 DOI: 10.1515/bot-2023-0013
Bandarupalli Devadatha, Revanth Babu Pallam, Sarma Venkateswara Vemuri
Abstract Although many novel marine fungi have been described from Indian mangroves, a significant number of mangroves in India have not been thoroughly investigated for marine fungi. This study highlights the diversity of marine fungi inhabiting dead and decaying wood of Avicennia marina and Rhizophora mucronata, collected from Thengaithittu and Veerampattinam mangroves of Pondicherry, Puducherry State, India. Through microscopic examination, a total of 52 species (in 48 genera) of marine fungi were identified, with 50 species (in 46 genera) belonging to the Ascomycota and 2 species (in 2 genera) belonging to the Basidiomycota. Previous studies recorded 69 marine fungi from Ariyankuppam and Mahé mangroves of Puducherry, and this study contributes 22 new records of marine fungi to this region. In this study, the phylogenetic placement of Rhizophila marina was determined, and this fungus was found to belong to the family Diatrypaceae.
尽管许多新的海洋真菌已经从印度红树林中被描述出来,但印度红树林中大量的海洋真菌尚未被彻底调查。本研究重点研究了从印度普度切里邦的Thengaithittu和Veerampattinam红树林中采集的Avicennia marina和Rhizophora mucronata死亡和腐烂木材中栖息的海洋真菌的多样性。镜检共鉴定出海洋真菌48属52种,其中子囊菌门46属50种,担子菌门2属2种。以往的研究记录了69种来自普都切里地区Ariyankuppam和mah红树林的海洋真菌,本研究为该地区提供了22种新的海洋真菌记录。本研究确定了嗜根菌marina的系统发育位置,发现该真菌属于藓科。
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引用次数: 0
Species diversity of the brown alga Lobophora (Dictyotales) in the Con Co Island Marine Protected Area, Vietnam 越南康岛海洋保护区褐藻Lophora(Dictytales)的物种多样性
IF 2.2 4区 生物学 Q2 MARINE & FRESHWATER BIOLOGY Pub Date : 2023-09-06 DOI: 10.1515/bot-2023-0047
D. T. Dam, Manh-Linh Nguyen, Myung-Sook Kim, C. Vieira
Abstract We reevaluated species diversity of the brown alga Lobophora in Vietnam’s Con Co Marine Protected Area (MPA), where only one species had previously been reported. Integrating morphological, ecological, and molecular analyses, we redefined the genus diversity, identifying nine species including two new ones: L. asiatica, L. boussoleae, L. lamourouxii, L. obscura1, L. pachyventera3, L. thailandensis, L. quangtriensis sp. nov., L. vietnamensis sp. nov., and Lobophora sp.1VNA. Lobophora variegata, the sole species previously reported, was absent. This study expands the number of Vietnam’s documented Lobophora species to 11. This work reevaluated Lobophora diversity in Vietnam based on a small island, contributing valuable seaweed diversity reference data for Con Co MPA management. Notably, within the MPA, Lobophora species exhibited no coral-aggressiveness, potentially serving as a health indicator for coral reef communities.
摘要我们重新评估了越南国家海洋保护区(MPA)褐藻Lophora的物种多样性,该保护区以前只报道过一种褐藻。综合形态学、生态学和分子分析,我们重新定义了属的多样性,确定了9个物种,包括两个新物种:亚洲乳杆菌、花乳杆菌、lamourouxii乳杆菌、暗乳乳杆菌1、厚乳杆菌3、泰国乳杆菌、泉三角乳杆菌、越南乳杆菌和斑叶藻。这项研究将越南记录在案的Lobophora物种数量扩大到11种。这项工作以一个小岛为基础重新评估了越南的Lobophora多样性,为Con-Co-MPA管理提供了有价值的海藻多样性参考数据。值得注意的是,在MPA中,Lobophora物种没有表现出珊瑚的攻击性,这可能是珊瑚礁群落的健康指标。
{"title":"Species diversity of the brown alga Lobophora (Dictyotales) in the Con Co Island Marine Protected Area, Vietnam","authors":"D. T. Dam, Manh-Linh Nguyen, Myung-Sook Kim, C. Vieira","doi":"10.1515/bot-2023-0047","DOIUrl":"https://doi.org/10.1515/bot-2023-0047","url":null,"abstract":"Abstract We reevaluated species diversity of the brown alga Lobophora in Vietnam’s Con Co Marine Protected Area (MPA), where only one species had previously been reported. Integrating morphological, ecological, and molecular analyses, we redefined the genus diversity, identifying nine species including two new ones: L. asiatica, L. boussoleae, L. lamourouxii, L. obscura1, L. pachyventera3, L. thailandensis, L. quangtriensis sp. nov., L. vietnamensis sp. nov., and Lobophora sp.1VNA. Lobophora variegata, the sole species previously reported, was absent. This study expands the number of Vietnam’s documented Lobophora species to 11. This work reevaluated Lobophora diversity in Vietnam based on a small island, contributing valuable seaweed diversity reference data for Con Co MPA management. Notably, within the MPA, Lobophora species exhibited no coral-aggressiveness, potentially serving as a health indicator for coral reef communities.","PeriodicalId":9191,"journal":{"name":"Botanica Marina","volume":" ","pages":""},"PeriodicalIF":2.2,"publicationDate":"2023-09-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"49639667","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Botanica Marina
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